BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG19 Members:13 3pri:Y 1e-109
AAM93676.1 unknown protein [Oryza sativa (japonica
cultivar-group)] gb|AAP54468.1| unknown protein [Oryza sativa (japonic
(1226 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9638.m03160|protein expressed protein 477 e-134
9635.m04698|protein Zinc finger, C3HC4 type (RING finger)... 359 7e-99
9638.m02656|protein expressed protein 284 3e-76
9632.m05700|protein expressed protein 206 8e-53
9632.m05699|protein expressed protein 206 8e-53
9635.m01750|protein hypothetical protein 198 2e-50
9638.m03160|protein expressed protein
Length = 242
Score = 477 bits (1214), Expect = e-134
Identities = 225/242 (92%), Positives = 234/242 (95%)
Frame = +2
Query: 209 MRKAYRDSLKVLEADIQHANTLATEFPREYDGACLQMRLSFSPAAHIFLFLVQWTDCSLA 388
MRKAY+DS KVLEADIQHANTLA+EFPREYDGACLQMRLS+SPAAHIFLFLVQWTDCSLA
Sbjct: 1 MRKAYKDSFKVLEADIQHANTLASEFPREYDGACLQMRLSYSPAAHIFLFLVQWTDCSLA 60
Query: 389 GALGLMRILIYKVYVDGTTTMSTHERKASIKEFYAVIFPSLLQLQRGITDMEDKKQKAVC 568
GALGL+RIL+YKVYVDGTTTMSTHERKASIKEFYAVIFPSLLQLQRGITD EDKKQKAVC
Sbjct: 61 GALGLLRILVYKVYVDGTTTMSTHERKASIKEFYAVIFPSLLQLQRGITDTEDKKQKAVC 120
Query: 569 MERYRRRDEDEATSLSDVDAEREEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSC 748
MERYRRRDEDE LS++DAEREEECGICMEMNSKVVLPNCTH MCLRCYQDWNSRSQSC
Sbjct: 121 MERYRRRDEDERNILSEIDAEREEECGICMEMNSKVVLPNCTHNMCLRCYQDWNSRSQSC 180
Query: 749 PFCRDNLNKTDPGDLWIYVEDDDVVDMETVSRENLRRLFMYINKLPLIVPDVIFSVYDSH 928
PFCRDNL KTDPGDLWIYVED DVVD+ETVSRENLRRLFMYINKLPLIVPDVIFS+YDSH
Sbjct: 181 PFCRDNLKKTDPGDLWIYVEDQDVVDLETVSRENLRRLFMYINKLPLIVPDVIFSIYDSH 240
Query: 929 IK 934
IK
Sbjct: 241 IK 242
9635.m04698|protein Zinc finger, C3HC4 type (RING finger),
putative
Length = 268
Score = 359 bits (911), Expect = 7e-99
Identities = 167/226 (73%), Positives = 199/226 (87%), Gaps = 20/226 (8%)
Frame = +2
Query: 209 MRKAYRDSLKVLEADIQHANTL--------------------ATEFPREYDGACLQMRLS 328
M +++RDSLKVLEADIQHAN+L A EF REYDGACLQMR+S
Sbjct: 1 MGRSFRDSLKVLEADIQHANSLDTCHQIYCLSGQSYLLWPCSAAEFRREYDGACLQMRMS 60
Query: 329 FSPAAHIFLFLVQWTDCSLAGALGLMRILIYKVYVDGTTTMSTHERKASIKEFYAVIFPS 508
+ PAAH FLFLVQWTDC+LAGALGL+RILIYKVY DGTTTMS HERKASI+EFYAVIFPS
Sbjct: 61 YCPAAHFFLFLVQWTDCNLAGALGLLRILIYKVYADGTTTMSAHERKASIREFYAVIFPS 120
Query: 509 LLQLQRGITDMEDKKQKAVCMERYRRRDEDEATSLSDVDAEREEECGICMEMNSKVVLPN 688
L+QL GI ++EDKKQKA+C+ERYRRRDED+ +S++D EEECGICME+N KVVLP
Sbjct: 121 LMQLHEGINEVEDKKQKAICIERYRRRDEDQKMVISEIDDNIEEECGICMEINGKVVLPT 180
Query: 689 CTHAMCLRCYQDWNSRSQSCPFCRDNLNKTDPGDLWIYVEDDDVVDMETVSRENLRRLFM 868
C+HAMC++CY+DW SRSQSCPFCRD+L + + DLWIY ++ D+VD+ TV +ENLRRLFM
Sbjct: 181 CSHAMCIKCYRDWRSRSQSCPFCRDSLKRVNSADLWIYTDNRDIVDIATVRKENLRRLFM 240
Query: 869 YINKLP 886
YI+KLP
Sbjct: 241 YIDKLP 246
9638.m02656|protein expressed protein
Length = 246
Score = 284 bits (718), Expect = 3e-76
Identities = 126/220 (57%), Positives = 179/220 (81%), Gaps = 1/220 (0%)
Frame = +2
Query: 275 ATEFPREYDGACLQMRLSFSPAAHIFLFLVQWTDCSLAGALGLMRILIYKVYVDGTTTMS 454
A+EF R+YDGA +QMR+++S AH FLVQW DC LAGALGL++I+IYKVY DGTT +
Sbjct: 33 ASEFLRDYDGAVIQMRMAYSAVAH---FLVQWIDCKLAGALGLLKIMIYKVYADGTTALP 89
Query: 455 THERKASIKEFYAVIFPSLLQLQRGITDMEDKKQKAVCMERYRRRDEDEATSLSDVDAER 634
ER+ASI++FY VIFPSLLQL GIT+++D+KQ+ +C++++R+ +E +S+VD ER
Sbjct: 90 EWEREASIRQFYGVIFPSLLQLPSGITELDDRKQRRLCLQKFRKVEE----RVSEVDLER 145
Query: 635 EEECGICMEMNSKVVLPNCTHAMCLRCYQDWNSRSQSCPFCRDNLNKTDPGDLWIYVEDD 814
E ECGIC+E+N+K+VLP+C H++C+RC++DWN++S+SCPFCR L K +P LW+Y +D
Sbjct: 146 ELECGICLEVNAKIVLPDCAHSLCMRCFEDWNTKSKSCPFCRACLKKVNPSSLWLYTDDR 205
Query: 815 DVVDMETVSRENLRRLFMYINKLPLIVPDVI-FSVYDSHIK 934
DVVDM+T++REN+RRLFM+I+KLPL+V V+ +Y+ IK
Sbjct: 206 DVVDMDTLTRENIRRLFMFISKLPLVVLHVVDLDIYEYRIK 246
9632.m05700|protein expressed protein
Length = 157
Score = 206 bits (518), Expect = 8e-53
Identities = 95/117 (81%), Positives = 113/117 (96%)
Frame = +2
Query: 209 MRKAYRDSLKVLEADIQHANTLATEFPREYDGACLQMRLSFSPAAHIFLFLVQWTDCSLA 388
MRK+++DSLKVLEADIQHANTLA++F R+YDGACLQMR+S+SPAA FLFLVQWTDCSLA
Sbjct: 6 MRKSFKDSLKVLEADIQHANTLASDFSRDYDGACLQMRMSYSPAAQFFLFLVQWTDCSLA 65
Query: 389 GALGLMRILIYKVYVDGTTTMSTHERKASIKEFYAVIFPSLLQLQRGITDMEDKKQK 559
GALGL+RILIYKVYVDGTTT+STHERKASI+EFYAVIFPSL+QL +GI+D++D++QK
Sbjct: 66 GALGLLRILIYKVYVDGTTTLSTHERKASIREFYAVIFPSLMQLHKGISDVDDRRQK 122
9632.m05699|protein expressed protein
Length = 157
Score = 206 bits (518), Expect = 8e-53
Identities = 95/117 (81%), Positives = 113/117 (96%)
Frame = +2
Query: 209 MRKAYRDSLKVLEADIQHANTLATEFPREYDGACLQMRLSFSPAAHIFLFLVQWTDCSLA 388
MRK+++DSLKVLEADIQHANTLA++F R+YDGACLQMR+S+SPAA FLFLVQWTDCSLA
Sbjct: 6 MRKSFKDSLKVLEADIQHANTLASDFSRDYDGACLQMRMSYSPAAQFFLFLVQWTDCSLA 65
Query: 389 GALGLMRILIYKVYVDGTTTMSTHERKASIKEFYAVIFPSLLQLQRGITDMEDKKQK 559
GALGL+RILIYKVYVDGTTT+STHERKASI+EFYAVIFPSL+QL +GI+D++D++QK
Sbjct: 66 GALGLLRILIYKVYVDGTTTLSTHERKASIREFYAVIFPSLMQLHKGISDVDDRRQK 122
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83969255
Number of Sequences: 59712
Number of extensions: 2598395
Number of successful extensions: 28050
Number of sequences better than 1.0e-10: 12
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28039
Number of HSP's gapped (non-prelim): 6
length of query: 408
length of database: 26,991,925
effective HSP length: 51
effective length of query: 357
effective length of database: 23,946,613
effective search space: 8548940841
effective search space used: 8548940841
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG44 Members:6 3pri:Y 7e-35
NP_187864.1 heat shock protein hsp70 [Arabidopsis thaliana]
dbj|BAB02269.1| 70 kDa heat shock protein [Arabidopsis thalian
(618 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m01656|protein heat shock cognate 70 kda protein 224 8e-59
9629.m06146|protein dnaK protein 187 2e-47
9639.m04468|protein dnaK-type molecular chaperone hsp70 -... 184 1e-46
9639.m04467|protein dnaK-type molecular chaperone hsp70 -... 184 1e-46
9631.m01647|protein dnaK protein 183 2e-46
9631.m05972|protein heat shock protein cognate 70 182 5e-46
9633.m03577|protein dnaK protein 180 2e-45
9633.m03578|protein dnaK protein 180 2e-45
9630.m00144|protein dnaK-type molecular chaperone BiP - rice 116 4e-26
9631.m04907|protein putative luminal binding protein 102 6e-22
9633.m03294|protein luminal binding protein 5 precursor (... 96 4e-20
9636.m04621|protein BiP-isoform D 90 3e-18
9633.m02768|protein luminal binding protein 4 precursor (... 88 1e-17
9631.m01656|protein heat shock cognate 70 kda protein
Length = 653
Score = 224 bits (566), Expect = 8e-59
Identities = 110/120 (91%), Positives = 113/120 (93%)
Frame = -2
Query: 617 EDEQVRHKVEARNALENYAYNMRNTVRDEKIASKLPDDDKKKIEDSIEDAIKWLDGNQLA 438
EDEQVRHKVEARNALENYAYNMRNTVRDEKIASKLP DDKKKIED+IEDAIKWLDGNQLA
Sbjct: 535 EDEQVRHKVEARNALENYAYNMRNTVRDEKIASKLPADDKKKIEDAIEDAIKWLDGNQLA 594
Query: 437 EADEFEDKMKELESICNPIISKMYQGAGPGGAAGMDEDMPSGGAGAGGGSGAGPKIEEVD 258
EADEFEDKMKELES+CNPIISKMYQG G GG AGMDED P+G AG GGGSGAGPKIEEVD
Sbjct: 595 EADEFEDKMKELESLCNPIISKMYQG-GAGGPAGMDEDAPNGSAGTGGGSGAGPKIEEVD 653
9629.m06146|protein dnaK protein
Length = 648
Score = 187 bits (470), Expect = 2e-47
Identities = 94/120 (78%), Positives = 105/120 (87%), Gaps = 2/120 (1%)
Frame = -2
Query: 617 EDEQVRHKVEARNALENYAYNMRNTVRDEKIASKLPDDDKKKIEDSIEDAIKWLDGNQLA 438
EDE+ + KV+A+NALENYAYNMRNT++D+KIASKL DDKKKIED+I+ AI WLD NQLA
Sbjct: 533 EDEEHKKKVDAKNALENYAYNMRNTIKDDKIASKLSADDKKKIEDAIDGAINWLDSNQLA 592
Query: 437 EADEFEDKMKELESICNPIISKMYQGAGP--GGAAGMDEDMPSGGAGAGGGSGAGPKIEE 264
EADEFEDKMKELESICNPII+KMYQGAG GGAAGMDED P+ GGSGAGPKIEE
Sbjct: 593 EADEFEDKMKELESICNPIIAKMYQGAGADMGGAAGMDEDAPA------GGSGAGPKIEE 646
Query: 263 VD 258
VD
Sbjct: 647 VD 648
9639.m04468|protein dnaK-type molecular chaperone hsp70 - rice
(fragment)
Length = 602
Score = 184 bits (462), Expect = 1e-46
Identities = 91/120 (75%), Positives = 102/120 (84%)
Frame = -2
Query: 617 EDEQVRHKVEARNALENYAYNMRNTVRDEKIASKLPDDDKKKIEDSIEDAIKWLDGNQLA 438
EDE+ + KVE++NALENYAYNMRNT++DEKIASKLP DKKKIED+I+ AI+WLDGNQLA
Sbjct: 487 EDEEHKKKVESKNALENYAYNMRNTIKDEKIASKLPAADKKKIEDAIDQAIQWLDGNQLA 546
Query: 437 EADEFEDKMKELESICNPIISKMYQGAGPGGAAGMDEDMPSGGAGAGGGSGAGPKIEEVD 258
EADEF+DKMKELE ICNPII+KMYQGAG A GMDED A GGSGAGPKIEEVD
Sbjct: 547 EADEFDDKMKELEGICNPIIAKMYQGAGADMAGGMDED----DAPPAGGSGAGPKIEEVD 602
9639.m04467|protein dnaK-type molecular chaperone hsp70 - rice
(fragment)
Length = 649
Score = 184 bits (462), Expect = 1e-46
Identities = 91/120 (75%), Positives = 102/120 (84%)
Frame = -2
Query: 617 EDEQVRHKVEARNALENYAYNMRNTVRDEKIASKLPDDDKKKIEDSIEDAIKWLDGNQLA 438
EDE+ + KVE++NALENYAYNMRNT++DEKIASKLP DKKKIED+I+ AI+WLDGNQLA
Sbjct: 534 EDEEHKKKVESKNALENYAYNMRNTIKDEKIASKLPAADKKKIEDAIDQAIQWLDGNQLA 593
Query: 437 EADEFEDKMKELESICNPIISKMYQGAGPGGAAGMDEDMPSGGAGAGGGSGAGPKIEEVD 258
EADEF+DKMKELE ICNPII+KMYQGAG A GMDED A GGSGAGPKIEEVD
Sbjct: 594 EADEFDDKMKELEGICNPIIAKMYQGAGADMAGGMDED----DAPPAGGSGAGPKIEEVD 649
9631.m01647|protein dnaK protein
Length = 650
Score = 183 bits (460), Expect = 2e-46
Identities = 88/120 (73%), Positives = 102/120 (84%)
Frame = -2
Query: 617 EDEQVRHKVEARNALENYAYNMRNTVRDEKIASKLPDDDKKKIEDSIEDAIKWLDGNQLA 438
EDE+ + KV+A+N+LENYAYNMRNT++D+KIASKLP+ DKKKIED+I+ AI WLD NQLA
Sbjct: 534 EDEEHKKKVDAKNSLENYAYNMRNTIKDDKIASKLPEADKKKIEDAIDGAISWLDSNQLA 593
Query: 437 EADEFEDKMKELESICNPIISKMYQGAGPGGAAGMDEDMPSGGAGAGGGSGAGPKIEEVD 258
EA+EFEDKMKELE +CNPII+KMYQGAG A GMDED P A AGG SG GPKIEEVD
Sbjct: 594 EAEEFEDKMKELEGVCNPIIAKMYQGAGADMAGGMDEDAP---AAAGGSSGPGPKIEEVD 650
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42535181
Number of Sequences: 59712
Number of extensions: 1446129
Number of successful extensions: 38569
Number of sequences better than 1.0e-10: 26
Number of HSP's better than 0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38536
Number of HSP's gapped (non-prelim): 17
length of query: 206
length of database: 26,991,925
effective HSP length: 49
effective length of query: 156
effective length of database: 24,066,037
effective search space: 3754301772
effective search space used: 3754301772
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 156 (65.2 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG57 Members:7 3pri:Y
(1083 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9636.m00068|protein transposon protein, putative, CACTA, ... 90 6e-18
9634.m04025|protein transposon protein, putative, CACTA, ... 87 4e-17
9635.m04045|protein transposon protein, putative, CACTA, ... 87 5e-17
9634.m00264|protein transposon protein, putative, CACTA, ... 84 4e-16
9640.m04219|protein retrotransposon protein, putative, Ty... 84 5e-16
9637.m02751|protein expressed protein 81 4e-15
9630.m04955|protein transposon protein, putative, CACTA, ... 81 4e-15
9632.m05090|protein Piwi domain, putative 81 4e-15
9630.m01457|protein transposon protein, putative, mariner... 81 4e-15
9629.m00785|protein transposon protein, putative, CACTA, ... 80 7e-15
9637.m02750|protein expressed protein 78 3e-14
9635.m04942|protein transposon protein, putative, CACTA, ... 76 8e-14
9640.m01076|protein transposon protein, putative, CACTA, ... 76 8e-14
9635.m04941|protein transposon protein, putative, CACTA, ... 76 8e-14
9635.m04943|protein transposon protein, putative, CACTA, ... 76 1e-13
9634.m00654|protein transposon protein, putative, CACTA, ... 76 1e-13
9631.m01941|protein retrotransposon protein, putative, Ty... 76 1e-13
9635.m03215|protein transposon protein, putative, CACTA, ... 76 1e-13
9635.m03216|protein transposon protein, putative, CACTA, ... 75 2e-13
9634.m00954|protein transposon protein, putative, CACTA, ... 75 2e-13
9636.m00068|protein transposon protein, putative, CACTA, En/Spm
sub-class
Length = 342
Score = 90.1 bits (220), Expect = 6e-18
Identities = 53/105 (50%), Positives = 59/105 (55%), Gaps = 12/105 (11%)
Frame = -3
Query: 715 PPL--PRPRAHPPLQPALPRPLP--RPPWSPSR----PRLAPRPPARPQLLARAPWPPPS 560
PP+ PRP+A PP Q P P P RPP P R P AP PP++ PPP
Sbjct: 34 PPVMPPRPQAPPPPQRFPPPPAPPIRPPSPPGRAPPPPGRAPPPPSQA--------PPPP 85
Query: 559 RRRPAPPPWPPRPRRGQAPRPR----PPPARGPPPSSRPPRRPRASPPPAPPPSARP 401
RR P PP PP P R P P PPP R PPP + PP PR +PPP PP P
Sbjct: 86 RRAPPPPALPPPPPRRAPPPPSMPPPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPP 142
Score = 89.3 bits (218), Expect = 1e-17
Identities = 58/118 (49%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Frame = -3
Query: 721 RWPPLPRPRAHPPLQPALPRPLPR-----PPWSPSRPRLAPRPPARPQLLARAPWPPPSR 557
R+PP P P PP P P P P +P PR AP PPA P PPP R
Sbjct: 49 RFPPPPAPPIRPPSPPGRAPPPPGRAPPPPSQAPPPPRRAPPPPALP--------PPPPR 100
Query: 556 RRPAPP--PWPPRPRRGQAP--RPRPPPARGPPPSSRPPRRPRASPPPAPPPSARPSGSG 389
R P PP P PP PRR P P PPP R PPP S P R P PPP P P A P S
Sbjct: 101 RAPPPPSMPPPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPP---PPPTPRPYAPPPPS- 156
Query: 388 HQRWPLP 368
H P P
Sbjct: 157 HPLAPPP 163
Score = 88.9 bits (217), Expect = 1e-17
Identities = 54/102 (52%), Positives = 59/102 (56%), Gaps = 10/102 (9%)
Frame = -3
Query: 718 WPPLPRPRAHPPLQPALPRP--LPRPPWSPSRPRLAPRPPARP----QLLARAPWPPPSR 557
+PP P P A PL P P+P +P P +P P+ P PPA P RAP PPP R
Sbjct: 17 YPPNPNPYA--PLNPNAPKPPVMPPRPQAPPPPQRFPPPPAPPIRPPSPPGRAP-PPPGR 73
Query: 556 RRPAPPPWPPRPRRGQAP--RPRPPPARGPPPSSRPPRRP--RASPPPAPPP 413
P P PP PRR P P PPP R PPP S PP P RA PPPA PP
Sbjct: 74 APPPPSQAPPPPRRAPPPPALPPPPPRRAPPPPSMPPPPPPRRAPPPPATPP 125
9634.m04025|protein transposon protein, putative, CACTA, En/Spm
sub-class
Length = 321
Score = 87.4 bits (213), Expect = 4e-17
Identities = 51/100 (51%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +3
Query: 414 GGGAGGGDARGRRGGREDGGGPRAGGGRGRGACPRRGRGGQGGGAGRRRDGGGQGARASS 593
GGG GGG G GG GGG GGG G G GRGG GGG G GGG G
Sbjct: 84 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGG---- 139
Query: 594 CGRAGGRGASRGRDGDQGGRGR-GRGSAGCSGGCARGRGRG 713
G GG G + G DGD G G G G AG GG RGRGRG
Sbjct: 140 -GGGGGGGGNGGDDGDNGDDGEDGDGDAGGRGGKGRGRGRG 179
Score = 84.3 bits (205), Expect = 4e-16
Identities = 49/107 (45%), Positives = 52/107 (47%), Gaps = 2/107 (1%)
Frame = +3
Query: 402 GRADGGGAGGGDARGRRGGREDGGGPRAGGGRGRGACPRRGRGGQGGGAGRRRDGGGQGA 581
G GGG GGG G GG GGG GGG GRG G GG GGG G GGG G
Sbjct: 88 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGG 147
Query: 582 RASSCGRAGGRGASRGRD-GDQGGRGRGRG-SAGCSGGCARGRGRGGHR 722
G G G D G +GG+GRGRG G G RG G+ G R
Sbjct: 148 NGGDDGDNGDDGEDGDGDAGGRGGKGRGRGRGRGMGSGIGRGNGQNGDR 196
Score = 72.6 bits (175), Expect = 1e-12
Identities = 49/105 (46%), Positives = 56/105 (52%), Gaps = 25/105 (23%)
Frame = +3
Query: 402 GRADGGGAGGGDARGRRGGREDGGGPRAGGGRGRGACPRRGRGGQGGGAGRRRDGGGQGA 581
G GGG GGG G GG GGG R GGG G G G GG GGG G +GG G
Sbjct: 95 GGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGNGGDDGD 154
Query: 582 RASS-------CGRAGGRGASRGR--------------DGDQ----GGRGRGRGSAGCSG 686
G GG+G RGR +GD+ GGRG+ +GS G S
Sbjct: 155 NGDDGEDGDGDAGGRGGKGRGRGRGRGMGSGIGRGNGQNGDRGINSGGRGKIKGSNGGSR 214
Query: 687 GCARGRGRGG 716
G +GG
Sbjct: 215 NVIGGGNKGG 224
9635.m04045|protein transposon protein, putative, CACTA, En/Spm
sub-class
Length = 741
Score = 87.0 bits (212), Expect = 5e-17
Identities = 51/105 (48%), Positives = 54/105 (50%), Gaps = 5/105 (4%)
Frame = -3
Query: 715 PPLPRPRAHPPLQPALPRPLPRPPWSPSRPRLAPRPPARPQLLARAPWPPPSR-----RR 551
PP P P PPL ++P P P PP S S AP PP P AP PPP
Sbjct: 89 PPPPPP---PPLLRSVPPPPPPPPISHSN---APPPPPLPAARFNAPPPPPPPPTTHFNA 142
Query: 550 PAPPPWPPRPRRGQAPRPRPPPARGPPPSSRPPRRPRASPPPAPPPSARP 401
P PPP PP R G P P PPP+ PPP PP PPP PPP ARP
Sbjct: 143 PPPPPPPPITRSGAPPSPPPPPS--PPPPPPPPGARPGPPPPPPPPGARP 190
Score = 87.0 bits (212), Expect = 5e-17
Identities = 55/115 (47%), Positives = 58/115 (49%), Gaps = 11/115 (9%)
Frame = -3
Query: 733 LTRSRWPPLPRPRAHPPLQP----ALPRPLPRPPWSPSRPRLAPRPPARPQLLARAPWPP 566
+TRS PP P P PP P A P P P PP +RP P PP + P PP
Sbjct: 151 ITRSGAPPSPPPPPSPPPPPPPPGARPGPPPPPPPPGARPGPPPPPPPPGGRPSAPPLPP 210
Query: 565 PSRRRPAPPPWPPRPRRGQAPRPRPPP---ARGPPPSSRPPRRPRASPPPAPPPSAR--- 404
P R APPP PP R AP P PPP R PPP P R PPP PPP R
Sbjct: 211 PGGRASAPPPPPPPSTRLGAPPPPPPPGAGGRAPPPPPAPGGR-LGGPPPPPPPGGRAPP 269
Query: 403 -PSGSG 389
P G G
Sbjct: 270 PPRGPG 275
Score = 83.9 bits (204), Expect = 5e-16
Identities = 53/106 (50%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Frame = -3
Query: 715 PPLPRPRAHPPLQPALPRPLPRPPWSP--SRPRLAPRPPARPQLLARAPWPPPSRRRPAP 542
PP RP PP P RP P PP P RP P PP + A P PPPS R AP
Sbjct: 172 PPGARPGPPPPPPPPGARPGPPPPPPPPGGRPSAPPLPPPGGRASAPPPPPPPSTRLGAP 231
Query: 541 PPWPPRPRRGQAPRPRPPPA---RGPPPSSRPPRRPRASPPP-----APPPSARPS 398
PP PP G+AP P P P GPPP PP RA PPP PPP PS
Sbjct: 232 PPPPPPGAGGRAPPPPPAPGGRLGGPPPP--PPPGGRAPPPPRGPGAPPPPGGNPS 285
Score = 81.9 bits (199), Expect = 2e-15
Identities = 52/116 (44%), Positives = 59/116 (50%), Gaps = 16/116 (13%)
Frame = -3
Query: 715 PPLPRPRAHPPLQPALP------RPLPRPPWSPSRPRLAPRPPARPQLLARAPWPPPSRR 554
PPLP R + P P P P P PP +R P PP P + P PPP
Sbjct: 119 PPLPAARFNAPPPPPPPPTTHFNAPPPPPPPPITRSGAPPSPPPPP---SPPPPPPPPGA 175
Query: 553 RPAPPPWPPRPRRGQAPRPRPPPARGPP--PSSRPPRRPRASPPPAPPPSAR-------- 404
RP PPP PP P P P PPP G P P PP ++PPP PPPS R
Sbjct: 176 RPGPPPPPPPPGARPGPPPPPPPPGGRPSAPPLPPPGGRASAPPPPPPPSTRLGAPPPPP 235
Query: 403 PSGSGHQRWPLP 368
P G+G + P P
Sbjct: 236 PPGAGGRAPPPP 247
Score = 81.5 bits (198), Expect = 2e-15
Identities = 49/106 (46%), Positives = 53/106 (49%), Gaps = 7/106 (6%)
Frame = -3
Query: 715 PPLPRPRAH------PPLQPALPRPLPRPPWSPSRPRLAPRPPARPQLL-ARAPWPPPSR 557
PP P P +H PPL A P PP P+ AP PP P + + AP PP
Sbjct: 104 PPPPPPISHSNAPPPPPLPAARFNAPPPPPPPPTTHFNAPPPPPPPPITRSGAPPSPPPP 163
Query: 556 RRPAPPPWPPRPRRGQAPRPRPPPARGPPPSSRPPRRPRASPPPAPPPSARPS 398
P PPP PP R G P P PP AR PP PP R S PP PPP R S
Sbjct: 164 PSPPPPPPPPGARPGPPPPPPPPGARPGPPPPPPPPGGRPSAPPLPPPGGRAS 216
Score = 78.8 bits (191), Expect = 2e-14
Identities = 55/105 (52%), Positives = 58/105 (54%), Gaps = 31/105 (29%)
Frame = -3
Query: 715 PPLPRPRAHPPLQPAL------PRPLPRPPWSPSRPRL-----APRPPARPQLLARAPWP 569
PP P P PPL+P+ P P P PP PS P AP PP P LL P P
Sbjct: 48 PPPPPP---PPLKPSSGAPCPPPPPPPPPPPPPSAPSSRAFSSAPPPPPPPPLLRSVPPP 104
Query: 568 PP-----------------SRRRPAPPPWPPRPRRGQAPRPRPPPA---RGPPPSSRPPR 449
PP +R PPP PP AP P PPP G PPS PP
Sbjct: 105 PPPPPISHSNAPPPPPLPAARFNAPPPPPPPPTTHFNAPPPPPPPPITRSGAPPSPPPPP 164
Query: 448 RPRASPPPAPPPSARP 401
P PPP PPP ARP
Sbjct: 165 SP---PPPPPPPGARP 177
Score = 78.0 bits (189), Expect = 3e-14
Identities = 52/107 (48%), Positives = 54/107 (49%), Gaps = 18/107 (16%)
Frame = -3
Query: 715 PPLPRPRAH-----PPLQPALPRP--LPRPPWSPSRPRLAPRPPARPQLLARAPWPPPSR 557
PP P P H PP P + R P PP PS P P P ARP P PPP
Sbjct: 131 PPPPPPTTHFNAPPPPPPPPITRSGAPPSPPPPPSPPPPPPPPGARP---GPPPPPPPPG 187
Query: 556 RRPAPPPWPPRPRRGQAPRPRPPP---ARGPPPSSRPPRRPRASPPP--------APPPS 410
RP PPP PP P + P PPP A PPP P R A PPP APPP
Sbjct: 188 ARPGPPPPPPPPGGRPSAPPLPPPGGRASAPPPPPPPSTRLGAPPPPPPPGAGGRAPPPP 247
Query: 409 ARPSG 395
P G
Sbjct: 248 PAPGG 252
Score = 69.9 bits (168), Expect = 8e-12
Identities = 48/102 (47%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Frame = -3
Query: 715 PPLPRPRAHPPLQ---PAL--PRPLPRPPWSPSRPRLAPRPPARPQLLARAPWPPPSR-- 557
PP P P PPL+ PA+ P P P PP PS P PP P P PPPS
Sbjct: 30 PPAPPP---PPLRSTVPAISPPPPPPPPPLKPSSGAPCPPPPPPPP-----PPPPPSAPS 81
Query: 556 -----RRPAPPPWPPRPRRGQAPRPRPP--PARGPPPSSRPPRRPRASPPPAPPPS 410
P PPP PP R P P PP + PPP P R A PPP PPP+
Sbjct: 82 SRAFSSAPPPPPPPPLLRSVPPPPPPPPISHSNAPPPPPLPAARFNAPPPPPPPPT 137
9634.m00264|protein transposon protein, putative, CACTA, En/Spm
sub-class
Length = 174
Score = 84.3 bits (205), Expect = 4e-16
Identities = 52/105 (49%), Positives = 57/105 (53%), Gaps = 4/105 (3%)
Frame = +3
Query: 402 GRADGGGAGGGDARGRRGGREDGGGPRAGGGRGRGACPRRGRGGQG--GGAGRRRDGGGQ 575
G+ G G GG RG RGG GGG GGG G G G+GG+G GG G GGG
Sbjct: 16 GQPGGRGRGGRGGRGGRGGASGGGGGGGGGGGGGGGGGAGGKGGKGGAGGHGGAGGGGGG 75
Query: 576 GARASSCGRAGGRGASRGRDGDQGGRGR--GRGSAGCSGGCARGRGRGG 716
G G AGG G + G G GG+GR GRG G SGG A GRG G
Sbjct: 76 GGGKGRKGGAGGHGGAGGGGGGGGGKGRKGGRGGDGGSGG-AGGRGGDG 123
Score = 81.1 bits (197), Expect = 3e-15
Identities = 51/116 (43%), Positives = 55/116 (46%), Gaps = 1/116 (0%)
Frame = +3
Query: 402 GRADGGGAGGGDARGRRGGREDGGGPRAGGGRGRGACPRRGRGGQGGGAGRRRDGGGQGA 581
G A GGG GGG G GG GG GG G G G GG GGG GR+ GG G
Sbjct: 33 GGASGGGGGGGGGGGGGGGGGAGGKGGKGGAGGHGGAG--GGGGGGGGKGRKGGAGGHGG 90
Query: 582 RASSCGRAGGRGASRGRDGDQGGRGR-GRGSAGCSGGCARGRGRGGHRERVRRASTA 749
G GG+G GR GD G G GRG G SGG GRGG VR + +
Sbjct: 91 AGGGGGGGGGKGRKGGRGGDGGSGGAGGRGGDGGSGGQG---GRGGDGGGVRSCTNS 144
Score = 72.6 bits (175), Expect = 1e-12
Identities = 47/101 (46%), Positives = 51/101 (49%), Gaps = 5/101 (4%)
Frame = +3
Query: 420 GAGGGDARGRRGGREDGGGPRAGGGRGRGACPRRGRGGQGGGAGRRRDGGGQGARASSCG 599
G GG RG RGGR GG GGG G GG GGG G GGG G + G
Sbjct: 16 GQPGGRGRGGRGGRGGRGGASGGGGGG---------GGGGGGGG----GGGAGGKGGK-G 61
Query: 600 RAGGRGASRGRDGDQGGRGR-----GRGSAGCSGGCARGRGRGGHR 722
AGG G + G G GG+GR G G AG GG G+GR G R
Sbjct: 62 GAGGHGGAGGGGGGGGGKGRKGGAGGHGGAGGGGGGGGGKGRKGGR 107
Score = 70.6 bits (170), Expect = 4e-12
Identities = 50/102 (49%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Frame = +3
Query: 402 GRADGGGAGGGDARGRRGGRED-GGGPRAGGGRGR--GACPRRGRGGQGGGAG-RRRDGG 569
G GGGAGG +G GG GGG GGG+GR GA G GG GGG G + R GG
Sbjct: 47 GGGGGGGAGGKGGKGGAGGHGGAGGGGGGGGGKGRKGGAGGHGGAGGGGGGGGGKGRKGG 106
Query: 570 GQGARASSCGRAGGRGASRGRDGDQGGRGRGRGSAGCSGGCARGRG 707
G S G AGGRG G G QGGRG G G C RG
Sbjct: 107 RGGDGGS--GGAGGRGGD-GGSGGQGGRG---GDGGGVRSCTNSRG 146
9640.m04219|protein retrotransposon protein, putative, Ty3-gypsy
sub-class
Length = 440
Score = 83.9 bits (204), Expect = 5e-16
Identities = 53/108 (49%), Positives = 66/108 (61%), Gaps = 19/108 (17%)
Frame = -3
Query: 730 TRSRWPPLPRPRAHPPLQPALPRPLPRPPWSPSRPRLAPRPPA-RPQLLARAPWPPPSRR 554
TR+R P RP PP++P P LP PP P P PRPP+ +P ++ P PPPS +
Sbjct: 131 TRTRVEPPHRP---PPVKPQPPPSLPPPP-PPPPPPPPPRPPSVKPPVVQPKPQPPPSLQ 186
Query: 553 RPAPPPWPP-RPR---------RGQAPRPRPPPARGPPPSSRPPRRPRASP--------P 428
P+PPP PP RP + Q P PPP+ PPP + PPR P +P P
Sbjct: 187 PPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQP 246
Query: 427 PAPPPSA 407
P PPP A
Sbjct: 247 PPPPPRA 253
Score = 74.5 bits (180), Expect = 3e-13
Identities = 43/101 (42%), Positives = 54/101 (52%), Gaps = 10/101 (9%)
Frame = -3
Query: 715 PPLPRPRAHPPLQPALPRPLPRPPWSPSRPRLAPRPPAR-----PQLLARAPWPPPSRRR 551
PP P P P ++P + +P P+PP S P P PP R P ++ P PPP+
Sbjct: 159 PPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPP 218
Query: 550 PAPPPWPPR-PRRGQAPRP---RPPPARGPPPSSRPPRRPRA-SPPPAPPP 413
P+PPP PP P R P P P PPP P + PR P P+PPP
Sbjct: 219 PSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAPVKMPRVLEPKPSPPP 269
Score = 73.0 bits (176), Expect = 9e-13
Identities = 50/118 (42%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Frame = -3
Query: 754 AAAVDARLTRSRWPPLPRPRAHPPLQPALPRPLPRPPWSPSRPRLAPRPPARPQLLARAP 575
AAAVD + + P P PAL P+P PP P R R PP RP + P
Sbjct: 98 AAAVDVDESSATSPEFKTP-------PALS-PVPPPP-PPPRTRTRVEPPHRPPPVK--P 146
Query: 574 WPPPSRRRPAPPPWPPRPRRGQA-------PRPRPPPARGPP-PSSRPPRRPRASPPPAP 419
PPPS P PPP PP P R + P+P+PPP+ PP P PP RP + PP
Sbjct: 147 QPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVV 206
Query: 418 PPSARP 401
P +P
Sbjct: 207 QPKPQP 212
Score = 71.4 bits (172), Expect = 3e-12
Identities = 44/106 (41%), Positives = 58/106 (54%), Gaps = 17/106 (16%)
Frame = -3
Query: 715 PPLPRPRAHPPLQPALPRPLPRPPWSPSRPRLAPRPPARPQLLARAPWPPPSRRRPAPPP 536
PP P P P ++P + +P P+PP P+ P +P PP P + R P P+ P P P
Sbjct: 190 PPPPPPTRPPSVKPPVVQPKPQPP--PTLPPPSPPPPP-PTVPPRTPGDTPAVVEPKPQP 246
Query: 535 WPPRPR------RGQAPRPRPPPAR-GPPP----------SSRPPRRPRASPPPAPPPSA 407
PP PR R P+P PPP PPP + P +P+ PP PPP
Sbjct: 247 PPPPPRAPVKMPRVLEPKPSPPPPSPLPPPPEDYWSPTAVTPPEPTKPKPPPPSPPPPPQ 306
Query: 406 RPS 398
+PS
Sbjct: 307 QPS 309
Score = 70.6 bits (170), Expect = 4e-12
Identities = 46/108 (42%), Positives = 59/108 (54%), Gaps = 26/108 (24%)
Frame = -3
Query: 715 PPLPRPRAHPPLQPALPRPLPRPPWSPSRPRL-------------APRPPAR-----PQL 590
PP+ +P+ PP P LP P P PP PR P PP R P++
Sbjct: 203 PPVVQPKPQPP--PTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAPVKMPRV 260
Query: 589 LARAPWPPPSRRRPAPPP--WPPRPRRGQAP-RPRPPPARGPPPSSRPPRR-----PRAS 434
L P PPP P PP W P P +P+PPP PPP +P +R P +
Sbjct: 261 LEPKPSPPPPSPLPPPPEDYWSPTAVTPPEPTKPKPPPPSPPPPPQQPSQRYWTPPPAIT 320
Query: 433 PPPAPPPSARPSGS 392
P PA P + +P+ S
Sbjct: 321 PEPAKPAAGKPTSS 334
Score = 66.7 bits (160), Expect = 7e-11
Identities = 48/114 (42%), Positives = 57/114 (49%), Gaps = 12/114 (10%)
Frame = -3
Query: 715 PPLPRPRA--------HPPLQPALPRPLPRPP---WSPSRPRLAPRPPARPQLLARAPWP 569
PP P PRA P P P PLP PP WSP+ + P P +P+ P P
Sbjct: 246 PPPPPPRAPVKMPRVLEPKPSPPPPSPLPPPPEDYWSPTA--VTPPEPTKPK--PPPPSP 301
Query: 568 PPSRRRPAPPPWPPRPRRGQAPRPRPP-PARGPPPSSRPPRRPRASPPPAPPPSARPSGS 392
PP ++P+ W P P A P P PA G P SS PP + PP P PS +G
Sbjct: 302 PPPPQQPSQRYWTPPP----AITPEPAKPAAGKPTSSSPPSTKDSPRPPLPAPSPAANG- 356
Query: 391 GHQRWP 374
G R P
Sbjct: 357 GDPRLP 362
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84380859
Number of Sequences: 59712
Number of extensions: 3649490
Number of successful extensions: 198435
Number of sequences better than 1.0e-10: 86
Number of HSP's better than 0.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 185030
Number of HSP's gapped (non-prelim): 2886
length of query: 361
length of database: 26,991,925
effective HSP length: 51
effective length of query: 309
effective length of database: 23,946,613
effective search space: 7399503417
effective search space used: 7399503417
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG76 Members:15 3pri:Y 6e-43
P19177 Histone H2A pir||S11498 histone H2A - parsley
(681 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m01677|protein Similar to histone H2A-like protein 256 4e-68
9629.m02961|protein Similar to histone H2A-like protein 256 4e-68
9633.m00149|protein histone H2A-like protein 242 5e-64
9633.m03589|protein Similar to histone H2A-like protein 242 7e-64
9640.m03333|protein histone h2a. [norway spruce, picea ex... 171 1e-42
9631.m05003|protein Core histone H2A/H2B/H3/H4 169 6e-42
9640.m02397|protein histone H2A (clone TH254) - wheat 169 6e-42
9635.m03571|protein histone H2A (clone TH254) - wheat 169 6e-42
9636.m03314|protein Core histone H2A/H2B/H3/H4 168 7e-42
9635.m03572|protein histone H2A protein, putative 168 9e-42
9631.m05214|protein putative histone H2A protein 121 1e-27
9631.m00595|protein Core histone H2A/H2B/H3/H4 121 1e-27
9638.m02385|protein histone H2A, putative 120 3e-27
9632.m01228|protein histone H2A 112 6e-25
9636.m01888|protein Similar to histone h2a.2.2. [wheat 82 1e-15
9635.m03701|protein hypothetical protein 70 3e-12
9631.m01677|protein Similar to histone H2A-like protein
Length = 159
Score = 256 bits (646), Expect = 4e-68
Identities = 133/153 (86%), Positives = 145/153 (93%), Gaps = 6/153 (3%)
Frame = +2
Query: 77 MEVSGAAAKGK--KGAAGRKAGGPRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTG 250
M+ +GA A GK KGAAGRKAGGPRKK+V+RSVKAGLQFPVGRIGRYLKKGRYAQR+GTG
Sbjct: 1 MDAAGAGAGGKLKKGAAGRKAGGPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTG 60
Query: 251 APVYLAAVLEYLAAELLELAGNAAKDNKKSRIIPRHLLLAVRNDEELGKLLAGVTIAHGG 430
APVYLAAVLEYLAAE+LELAGNAA+DNKK+RIIPRH+LLA+RNDEELGKLLAGVTIAHGG
Sbjct: 61 APVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGG 120
Query: 431 VIPKINPVLLPKRTAEK---EGKGPKSPKKAT-KSPKKA 535
V+P INPVLLPK+TAEK GK KSPKKA KSPKKA
Sbjct: 121 VLPNINPVLLPKKTAEKAAAAGKEAKSPKKAAGKSPKKA 159
9629.m02961|protein Similar to histone H2A-like protein
Length = 159
Score = 256 bits (646), Expect = 4e-68
Identities = 133/153 (86%), Positives = 145/153 (93%), Gaps = 6/153 (3%)
Frame = +2
Query: 77 MEVSGAAAKGK--KGAAGRKAGGPRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTG 250
M+ +GA A GK KGAAGRKAGGPRKK+V+RSVKAGLQFPVGRIGRYLKKGRYAQR+GTG
Sbjct: 1 MDAAGAGAGGKLKKGAAGRKAGGPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTG 60
Query: 251 APVYLAAVLEYLAAELLELAGNAAKDNKKSRIIPRHLLLAVRNDEELGKLLAGVTIAHGG 430
APVYLAAVLEYLAAE+LELAGNAA+DNKK+RIIPRH+LLA+RNDEELGKLLAGVTIAHGG
Sbjct: 61 APVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGG 120
Query: 431 VIPKINPVLLPKRTAEK---EGKGPKSPKKAT-KSPKKA 535
V+P INPVLLPK+TAEK GK KSPKKA KSPKKA
Sbjct: 121 VLPNINPVLLPKKTAEKAAAAGKEAKSPKKAAGKSPKKA 159
9633.m00149|protein histone H2A-like protein
Length = 156
Score = 242 bits (611), Expect = 5e-64
Identities = 122/152 (80%), Positives = 134/152 (87%), Gaps = 1/152 (0%)
Frame = +2
Query: 89 GAAAKGKKGAAGRKAGGPRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLA 268
G K K A GRK GGP+KK V+RSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLA
Sbjct: 4 GVGGKAAKKAVGRKLGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLA 63
Query: 269 AVLEYLAAELLELAGNAAKDNKKSRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVIPKIN 448
AVLEYLAAE+LELAGNAA+DNKK+RIIPRH+LLA+RNDEELGKLLAGVTIAHGGV+P IN
Sbjct: 64 AVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNIN 123
Query: 449 PVLLPKRTAEKEGKGPKSPK-KATKSPKKATKA 544
PVLLPK+TAEK K K+ K KA KSPKK ++
Sbjct: 124 PVLLPKKTAEKADKPAKASKDKAAKSPKKQARS 156
9633.m03589|protein Similar to histone H2A-like protein
Length = 163
Score = 242 bits (610), Expect = 7e-64
Identities = 128/156 (82%), Positives = 141/156 (90%), Gaps = 8/156 (5%)
Frame = +2
Query: 77 MEVSGAAAKGKKGAAGRKAGG-PRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGA 253
MEV GA K GA GR+ GG P+KK V+RSVKAGLQFPVGRIGRYLK+GRY+QR+GTGA
Sbjct: 1 MEV-GAKVPKKAGAGGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGA 59
Query: 254 PVYLAAVLEYLAAELLELAGNAAKDNKKSRIIPRHLLLAVRNDEELGKLLAGVTIAHGGV 433
PVYLAAVLEYLAAE+LELAGNAA+DNKK+RIIPRH+LLA+RNDEELGKLLAGVTIAHGGV
Sbjct: 60 PVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGV 119
Query: 434 IPKINPVLLPKRTAE------KEGKGPKSPKKA-TKSPKKATKA 544
+P INPVLLPK+T KEGK PKSPKKA TKSPKKA A
Sbjct: 120 LPNINPVLLPKKTGSAAAKEAKEGKTPKSPKKATTKSPKKAAAA 163
9640.m03333|protein histone h2a. [norway spruce, picea excelsa
Length = 138
Score = 171 bits (428), Expect = 1e-42
Identities = 84/119 (70%), Positives = 98/119 (81%)
Frame = +2
Query: 113 GAAGRKAGGPRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAA 292
G G + KSV+RS KAGLQFPVGRI RYLK G+YA+RVG GAPVYL+AVLEYLAA
Sbjct: 5 GGGGGRGKSKGSKSVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAA 64
Query: 293 ELLELAGNAAKDNKKSRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVIPKINPVLLPKR 469
E+LELAGNAA+DNKK+RI+PRH+ LAVRNDEEL +LL VTIA GGV+P I+ LLPK+
Sbjct: 65 EVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKK 123
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47884619
Number of Sequences: 59712
Number of extensions: 1565741
Number of successful extensions: 25814
Number of sequences better than 1.0e-10: 32
Number of HSP's better than 0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 25782
Number of HSP's gapped (non-prelim): 19
length of query: 227
length of database: 26,991,925
effective HSP length: 50
effective length of query: 176
effective length of database: 24,006,325
effective search space: 4225113200
effective search space used: 4225113200
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 157 (65.6 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG86 Members:123 3pri:Y 1e-129
P05167 Thiol protease aleurain precursor emb|CAA28804.1|
aleurain [Hordeum vulgare]
(1572 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9637.m02366|protein oryzain gamma chain precursor (ec 3.4... 638 0.0
9637.m02365|protein oryzain gamma chain precursor (ec 3.4... 638 0.0
9632.m05607|protein Papain family cysteine protease, puta... 249 8e-66
9639.m01379|protein cysteine proteinase (EC 3.4.22.-) - rice 238 3e-62
9639.m01378|protein cysteine proteinase (EC 3.4.22.-) - rice 238 3e-62
9635.m00082|protein Papain family cysteine protease, puta... 230 4e-60
9632.m05612|protein Papain family cysteine protease, puta... 227 5e-59
9637.m02821|protein senescence-specific cysteine protease... 224 3e-58
9632.m01184|protein Papain family cysteine protease, puta... 221 3e-57
9629.m07334|protein Papain family cysteine protease, puta... 220 6e-57
9629.m06748|protein Papain family cysteine protease, puta... 219 1e-56
9631.m05317|protein putative cysteine protease 219 1e-56
9630.m04725|protein cysteine proteinase 217 3e-56
9629.m04106|protein Papain family cysteine protease, puta... 215 2e-55
9633.m00094|protein cysteine proteinase, putative 214 3e-55
9632.m01168|protein Papain family cysteine protease, puta... 213 5e-55
9636.m04511|protein cysteine proteinase, putative 211 2e-54
9632.m05417|protein Similar to oryzain alpha chain precur... 210 5e-54
9633.m04018|protein cysteine proteinase (EC 3.4.22.-) [si... 206 6e-53
9632.m01189|protein Papain family cysteine protease, puta... 206 8e-53
9637.m02366|protein oryzain gamma chain precursor (ec 3.4.22.-)
Length = 362
Score = 638 bits (1627), Expect = 0.0
Identities = 309/361 (85%), Positives = 331/361 (91%), Gaps = 2/361 (0%)
Frame = +3
Query: 51 MAHARVLLL--ALAVLATAAVAVASSSSFADSNPIRPVTDRAASTLESAVLGALGRTRHA 224
MAH R++LL A AV AT+AVA A+SS F DSNPIR VTD AAS LES V+ ALGRTR A
Sbjct: 1 MAHRRIILLLAAAAVAATSAVA-AASSGFDDSNPIRSVTDHAASALESTVIAALGRTRDA 59
Query: 225 LRFARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQ 404
LRFARFAVR+GK Y AAEV+RRFRIFSESLE VRSTNR+GLPYRLGINRF+DMSWEEFQ
Sbjct: 60 LRFARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMSWEEFQ 119
Query: 405 ATRLGAAQTCSATLAGNHLMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALE 584
A+RLGAAQ CSATLAGNH MRDAAALPETKDWREDGIVSPVK+Q HCGSCWTFSTTG+LE
Sbjct: 120 ASRLGAAQNCSATLAGNHRMRDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLE 179
Query: 585 AAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVN 764
AAYTQATGK +SLSEQQLVDCA +NNFGC+GGLPSQAFEYIKYNGG+DTEE+YPY GVN
Sbjct: 180 AAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVN 239
Query: 765 GVCHYKAENAAVQVLDSVNITLNAEDELKNAVGLVRPVSVAFQVIDGFRQYKSGVYTSDH 944
G+CHYK EN V+VLDSVNITL AEDELKNAVGLVRPVSVAFQVI+GFR YKSGVYTSDH
Sbjct: 240 GICHYKPENVGVKVLDSVNITLGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDH 299
Query: 945 CGTTPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIATCASYP 1124
CGT+P DVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMC IATCASYP
Sbjct: 300 CGTSPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYP 359
Query: 1125 VVA 1133
+VA
Sbjct: 360 IVA 362
9637.m02365|protein oryzain gamma chain precursor (ec 3.4.22.-)
Length = 362
Score = 638 bits (1627), Expect = 0.0
Identities = 309/361 (85%), Positives = 331/361 (91%), Gaps = 2/361 (0%)
Frame = +3
Query: 51 MAHARVLLL--ALAVLATAAVAVASSSSFADSNPIRPVTDRAASTLESAVLGALGRTRHA 224
MAH R++LL A AV AT+AVA A+SS F DSNPIR VTD AAS LES V+ ALGRTR A
Sbjct: 1 MAHRRIILLLAAAAVAATSAVA-AASSGFDDSNPIRSVTDHAASALESTVIAALGRTRDA 59
Query: 225 LRFARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQ 404
LRFARFAVR+GK Y AAEV+RRFRIFSESLE VRSTNR+GLPYRLGINRF+DMSWEEFQ
Sbjct: 60 LRFARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMSWEEFQ 119
Query: 405 ATRLGAAQTCSATLAGNHLMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALE 584
A+RLGAAQ CSATLAGNH MRDAAALPETKDWREDGIVSPVK+Q HCGSCWTFSTTG+LE
Sbjct: 120 ASRLGAAQNCSATLAGNHRMRDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLE 179
Query: 585 AAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVN 764
AAYTQATGK +SLSEQQLVDCA +NNFGC+GGLPSQAFEYIKYNGG+DTEE+YPY GVN
Sbjct: 180 AAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVN 239
Query: 765 GVCHYKAENAAVQVLDSVNITLNAEDELKNAVGLVRPVSVAFQVIDGFRQYKSGVYTSDH 944
G+CHYK EN V+VLDSVNITL AEDELKNAVGLVRPVSVAFQVI+GFR YKSGVYTSDH
Sbjct: 240 GICHYKPENVGVKVLDSVNITLGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDH 299
Query: 945 CGTTPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIATCASYP 1124
CGT+P DVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMC IATCASYP
Sbjct: 300 CGTSPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYP 359
Query: 1125 VVA 1133
+VA
Sbjct: 360 IVA 362
9632.m05607|protein Papain family cysteine protease, putative
Length = 466
Score = 249 bits (630), Expect = 8e-66
Identities = 157/370 (42%), Positives = 207/370 (55%), Gaps = 10/370 (2%)
Frame = +3
Query: 54 AHARVLLLALAVLATAAVAVASSSSFADSNPIRPVTDRAASTLESAVLGALGRTRHALRF 233
A A LLL + ATAA D + I + A LE A R + L
Sbjct: 6 AAAAFLLLLIVGAATAA---------PDMSIISYNAEHGARGLEEGPTEAEARAAYDLWL 56
Query: 234 ARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLP---YRLGINRFSDMSWEEFQ 404
A G E RRF +F ++L+ V + N + +RLG+NRF+D++ EEF+
Sbjct: 57 AENGG--GSPNALGGEHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNEEFR 114
Query: 405 ATRLGAAQTCSATLAGNHLMRDAAA-LPETKDWREDGIVSPVKNQAHCGSCWTFSTTGAL 581
AT LGA + AG D LPE+ DWRE G V+PVKNQ CGSCW FS +
Sbjct: 115 ATFLGAKVAERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTV 174
Query: 582 EAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGV 761
E+ TG+ I+LSEQ+LV+C+ N GCNGGL AF++I NGGIDTE+ YPYK V
Sbjct: 175 ESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAV 234
Query: 762 NGVCHYKAENAAVQVLDSV-NITLNAEDELKNAVGLVRPVSVAFQVID-GFRQYKSGVYT 935
+G C ENA V +D ++ N E L+ AV +PVSVA + F+ Y SGV+
Sbjct: 235 DGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVA-HQPVSVAIEAGGREFQLYHSGVF- 292
Query: 936 SDHCGTTPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNM----CAI 1103
S CGT+ D H V+AVGYG +NG YW+++NSWG WG++GY +ME N+ C I
Sbjct: 293 SGRCGTSLD---HGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERNINVTTGKCGI 349
Query: 1104 ATCASYPVVAA*RSAKSAST 1163
A ASYP + K + T
Sbjct: 350 AMMASYPTKSGANPPKPSPT 369
9639.m01379|protein cysteine proteinase (EC 3.4.22.-) - rice
Length = 378
Score = 238 bits (600), Expect = 3e-62
Identities = 152/368 (41%), Positives = 215/368 (58%), Gaps = 19/368 (5%)
Frame = +3
Query: 63 RVLLLALAVLATAAVAVASSSSFADSNPIRPVTDRAASTLESAVLGAL-GRTRHALRFAR 239
R L+A A +A AA A A + + P T+ S+ ES L AL R R +R
Sbjct: 3 RCFLVAAAAVALAAAAAAPARAI-------PFTESDLSSEES--LRALYERWRSRYTVSR 53
Query: 240 FAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKG-LPYRLGINRFSDMSWEEFQATRL 416
A G + E RRRF +F E+ + NR+G P+RL +N+F+DM+ +EF+ T
Sbjct: 54 PAASGGVGNDDG-EARRRFNVFVENARYIHEANRRGGRPFRLALNKFADMTTDEFRRTYA 112
Query: 417 GAAQTCSATLAGNHLMR---------DAAALPETKDWREDGIVSPVKNQAHCGSCWTFST 569
G+ +L+G D LP DWRE G V+ +K+Q CGSCW FST
Sbjct: 113 GSRARHHRSLSGGRGGEGGSFRYGGDDEDNLPPAVDWRERGAVTGIKDQGQCGSCWAFST 172
Query: 570 TGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYP 749
A+E TG+ ++LSEQ+LVDC G +N GC+GGL AF++IK NGGI TE +YP
Sbjct: 173 VAAVEGVNKIKTGRLVTLSEQELVDCDTG-DNQGCDGGLMDYAFQFIKRNGGITTESNYP 231
Query: 750 YKGVNGVCH-YKAENAAVQVLDSVNITLNAEDELKNAVGLVRPVSVAFQVI-DGFRQYKS 923
Y+ G C+ KA + V + ++ N E L+ AV +PV+VA + F+ Y
Sbjct: 232 YRAEQGRCNKAKASSHDVTIDGYEDVPANDESALQKAVA-NQPVAVAVEASGQDFQFYSE 290
Query: 924 GVYTSDHCGTTPDDVNHAVLAVGYGV-ENGVPYWLIKNSWGADWGDNGYFKMEMG----- 1085
GV+T + CGT D++H V AVGYG+ +G YW++KNSWG DWG+ GY +M+ G
Sbjct: 291 GVFTGE-CGT---DLDHGVAAVGYGITRDGTKYWIVKNSWGEDWGERGYIRMQRGVSSDS 346
Query: 1086 KNMCAIATCASYPVVAA*RSAKSASTV 1166
+C IA ASYPV + R+A +++ V
Sbjct: 347 NGLCGIAMEASYPVKSGARNAAASNRV 373
9639.m01378|protein cysteine proteinase (EC 3.4.22.-) - rice
Length = 378
Score = 238 bits (600), Expect = 3e-62
Identities = 152/368 (41%), Positives = 215/368 (58%), Gaps = 19/368 (5%)
Frame = +3
Query: 63 RVLLLALAVLATAAVAVASSSSFADSNPIRPVTDRAASTLESAVLGAL-GRTRHALRFAR 239
R L+A A +A AA A A + + P T+ S+ ES L AL R R +R
Sbjct: 3 RCFLVAAAAVALAAAAAAPARAI-------PFTESDLSSEES--LRALYERWRSRYTVSR 53
Query: 240 FAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKG-LPYRLGINRFSDMSWEEFQATRL 416
A G + E RRRF +F E+ + NR+G P+RL +N+F+DM+ +EF+ T
Sbjct: 54 PAASGGVGNDDG-EARRRFNVFVENARYIHEANRRGGRPFRLALNKFADMTTDEFRRTYA 112
Query: 417 GAAQTCSATLAGNHLMR---------DAAALPETKDWREDGIVSPVKNQAHCGSCWTFST 569
G+ +L+G D LP DWRE G V+ +K+Q CGSCW FST
Sbjct: 113 GSRARHHRSLSGGRGGEGGSFRYGGDDEDNLPPAVDWRERGAVTGIKDQGQCGSCWAFST 172
Query: 570 TGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYP 749
A+E TG+ ++LSEQ+LVDC G +N GC+GGL AF++IK NGGI TE +YP
Sbjct: 173 VAAVEGVNKIKTGRLVTLSEQELVDCDTG-DNQGCDGGLMDYAFQFIKRNGGITTESNYP 231
Query: 750 YKGVNGVCH-YKAENAAVQVLDSVNITLNAEDELKNAVGLVRPVSVAFQVI-DGFRQYKS 923
Y+ G C+ KA + V + ++ N E L+ AV +PV+VA + F+ Y
Sbjct: 232 YRAEQGRCNKAKASSHDVTIDGYEDVPANDESALQKAVA-NQPVAVAVEASGQDFQFYSE 290
Query: 924 GVYTSDHCGTTPDDVNHAVLAVGYGV-ENGVPYWLIKNSWGADWGDNGYFKMEMG----- 1085
GV+T + CGT D++H V AVGYG+ +G YW++KNSWG DWG+ GY +M+ G
Sbjct: 291 GVFTGE-CGT---DLDHGVAAVGYGITRDGTKYWIVKNSWGEDWGERGYIRMQRGVSSDS 346
Query: 1086 KNMCAIATCASYPVVAA*RSAKSASTV 1166
+C IA ASYPV + R+A +++ V
Sbjct: 347 NGLCGIAMEASYPVKSGARNAAASNRV 373
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111007843
Number of Sequences: 59712
Number of extensions: 3904174
Number of successful extensions: 118828
Number of sequences better than 1.0e-10: 71
Number of HSP's better than 0.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 118112
Number of HSP's gapped (non-prelim): 127
length of query: 524
length of database: 26,991,925
effective HSP length: 52
effective length of query: 471
effective length of database: 23,886,901
effective search space: 11250730371
effective search space used: 11250730371
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG89 Members:156 3pri:Y 1e-137
O22347 Tubulin alpha-1 chain (Alpha-1 tubulin)
gb|AAC05717.1| alpha tubulin 1 [Eleusine indica]
(1702 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m05042|protein alpha-tubulin 910 0.0
9635.m03858|protein tubulin alpha-1 chain 867 0.0
9631.m01118|protein tubulin alpha-2 chain (alpha-2 tubulin) 825 0.0
9634.m04473|protein beta-tubulin R2242 - rice 395 e-109
9630.m00647|protein tubulin beta chain (fragment) 393 e-109
9629.m01752|protein tubulin beta-5 chain (beta-5 tubulin) 392 e-108
9633.m03161|protein tubulin beta-5 chain (beta-5 tubulin) 392 e-108
9631.m00057|protein Tubulin/FtsZ family, GTPase domain, p... 391 e-108
9629.m05808|protein beta-tubulin R1623 - rice 391 e-108
9629.m05807|protein beta-tubulin R1623 - rice 391 e-108
9631.m05571|protein beta-tubulin 390 e-108
9631.m05570|protein beta-tubulin 390 e-108
9631.m04449|protein tubulin beta subunit 387 e-107
9633.m00567|protein tubulin gamma-2 chain (gamma-2 tubulin) 243 6e-64
9631.m05042|protein alpha-tubulin
Length = 451
Score = 910 bits (2325), Expect = 0.0
Identities = 441/451 (97%), Positives = 445/451 (97%)
Frame = +3
Query: 153 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 332
MRECISIHIGQAGIQVGNACWELYCLEHGIQ DGQMP D+TVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 333 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 512
HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 513 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 692
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 693 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 872
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
Query: 873 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 1052
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
Sbjct: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
Query: 1053 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 1232
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
Query: 1233 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1412
SVVP GDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 361 SVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
Query: 1413 AREDLAALEKDYEEVGAEFDEGEDGDEGDEY 1505
AREDLAALEKDYEEVGAE DE EDGD+GDEY
Sbjct: 421 AREDLAALEKDYEEVGAESDENEDGDDGDEY 451
9635.m03858|protein tubulin alpha-1 chain
Length = 450
Score = 867 bits (2216), Expect = 0.0
Identities = 416/451 (92%), Positives = 435/451 (96%)
Frame = +3
Query: 153 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 332
MRE ISIHIGQAGIQVGNACWELYCLEHGI+PDG MP D TVG DAFNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 333 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 512
HVPRA+FVDLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 513 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 692
R+RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT+YPSPQVST+
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 693 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 872
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRL+SQ+ISSLT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 873 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 1052
SLRFDGA+NVDV EFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSV EITN+ FEPSS
Sbjct: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300
Query: 1053 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 1232
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 1233 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1412
SVVPGGDLAKVQRAVCMISN+T+V EVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1413 AREDLAALEKDYEEVGAEFDEGEDGDEGDEY 1505
AREDLAALEKDYEEVGAE + E+ D+G++Y
Sbjct: 421 AREDLAALEKDYEEVGAEGADDEN-DDGEDY 450
9631.m01118|protein tubulin alpha-2 chain (alpha-2 tubulin)
Length = 449
Score = 825 bits (2108), Expect = 0.0
Identities = 392/451 (86%), Positives = 423/451 (92%)
Frame = +3
Query: 153 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 332
MRE ISIHIGQAGIQVGN+CWELYCLEHGIQPDG MP D T G DAFNTFFSET +GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
Query: 333 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 512
HVPRA+FVDLEPTVIDEV+TG YRQLFHPEQLIS KEDAANNFARGHYT+G+E+VDLCLD
Sbjct: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
Query: 513 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 692
R+RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYG+KSKLGFT+YPSPQ+ST+
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQISTA 180
Query: 693 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 872
VVEPYNSVLSTHSL+EHTDV VLLDNEAIYDIC+RSLDIERPTYTNLNRL+SQVISSLT
Sbjct: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
Query: 873 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 1052
SLRFDGA+NVD+ EFQTNLVPYPRIHFMLSSYAP+IS EKA+HEQ SV EITNS FEP+S
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
Query: 1053 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 1232
+MAKCDPRHGKYMACCLMYRGDVVPKDVNAAV +IKT+RT+QFVDWCPTGFKCGINYQPP
Sbjct: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
Query: 1233 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1412
+ VPGGDLAKV+RAVCMISN+T+V EVFSRID KFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1413 AREDLAALEKDYEEVGAEFDEGEDGDEGDEY 1505
AREDLAALEKDYEEVGAE + +D +E EY
Sbjct: 421 AREDLAALEKDYEEVGAEVE--DDDEEQGEY 449
9634.m04473|protein beta-tubulin R2242 - rice
Length = 446
Score = 395 bits (1004), Expect = e-109
Identities = 189/450 (42%), Positives = 286/450 (63%), Gaps = 3/450 (0%)
Frame = +3
Query: 153 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 332
MRE + I GQ G Q+G WE+ C EHGI G+ GD + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 333 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 512
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 513 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 692
+RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+V+PSP+VS +
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 693 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 872
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L+S +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
Query: 873 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 1052
LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 1053 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 1232
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 1233 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1412
++ A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 --------IGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 1413 AR---EDLAALEKDYEEVGAEFDEGEDGDEGDE 1502
A DL A + Y++ AE ++ E+ +E +E
Sbjct: 411 AESNMNDLVAEYQQYQDATAEEEDYEEEEEDEE 443
9630.m00647|protein tubulin beta chain (fragment)
Length = 447
Score = 393 bits (1000), Expect = e-109
Identities = 188/450 (41%), Positives = 286/450 (62%), Gaps = 3/450 (0%)
Frame = +3
Query: 153 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 332
MRE + I GQ G Q+G WE+ C EHGI G+ GD + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 333 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 512
VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 513 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 692
+RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+V+PSP+VS +
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 693 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 872
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L+S +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
Query: 873 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 1052
LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 1053 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 1232
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 1233 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1412
+ ++ A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 N--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 1413 AR---EDLAALEKDYEEVGAEFDEGEDGDEGDE 1502
A DL A + Y++ A+ +E + GDE ++
Sbjct: 411 AESNMNDLVAEYQQYQDATADDEEEDYGDEEED 443
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120044996
Number of Sequences: 59712
Number of extensions: 3960988
Number of successful extensions: 52730
Number of sequences better than 1.0e-10: 28
Number of HSP's better than 0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52690
Number of HSP's gapped (non-prelim): 17
length of query: 567
length of database: 26,991,925
effective HSP length: 52
effective length of query: 514
effective length of database: 23,886,901
effective search space: 12277867114
effective search space used: 12277867114
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG91 Members:150 3pri:Y 1e-121
P36183 ENDOPLASMIN HOMOLOG PRECURSOR (GRP94 HOMOLOG)
pir||S33533 heat shock protein 90 homolog precursor - barley
(2929 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9634.m04916|protein Hsp90 protein, putative 1427 0.0
9636.m03953|protein Similar to heat shock protein 82 690 0.0
9637.m02719|protein Similar to heat shock protein 82 686 0.0
9632.m00078|protein Similar to heat shock protein HSP82 -... 682 0.0
9637.m02656|protein heat-shock protein, 82K, precursor - rye 623 e-178
9636.m03832|protein heat-shock protein, 82K, precursor - rye 610 e-174
9636.m03831|protein heat-shock protein, 82K, precursor - rye 610 e-174
9636.m03952|protein Similar to heat shock protein 82 606 e-173
9640.m03211|protein AC009176 putative heat-shock protein 595 e-169
9637.m03067|protein Similar to heat shock protein 90A 226 2e-58
9634.m04916|protein Hsp90 protein, putative
Length = 818
Score = 1427 bits (3654), Expect = 0.0
Identities = 726/809 (89%), Positives = 766/809 (93%), Gaps = 30/809 (3%)
Frame = +2
Query: 53 MRKWALSCALLLVLLL-TTLPDP--------------------------AKKLQVNAEES 151
MRKWALS ALLL+LLL TTLPDP AKKLQVNA++S
Sbjct: 1 MRKWALSSALLLLLLLLTTLPDPGMSLSAPAAGGVISLVGFAATSICCNAKKLQVNADDS 60
Query: 152 SDEVGDFPKVEEKLGAVPHGLSTDSEVVQRESESISRKTLRNSAEKFEFQAEVSRLMDII 331
+DE+ D PKVEEK+G VPHGLSTDSEVVQRE+ESISRKTLR+SAEKFEFQAEVSRLMDII
Sbjct: 61 TDELVDPPKVEEKIGGVPHGLSTDSEVVQREAESISRKTLRSSAEKFEFQAEVSRLMDII 120
Query: 332 INSLYSNKDIFLRELISNASDALDKIRFLALTDKEVMGEGDTAKLEIQIKLDKENKILSI 511
INSLYSNKDIFLRELISNASDALDKIRFLALTDKEV+GEGDTAKLEIQIKLDKE KILSI
Sbjct: 121 INSLYSNKDIFLRELISNASDALDKIRFLALTDKEVLGEGDTAKLEIQIKLDKEKKILSI 180
Query: 512 RDRGVGMTKEDLIKNLGTIAKSGTSAFVEKMQTGGDLNLIGQFGVGFYSVYLVADYVEVV 691
RDRG+ AFVEKMQTGGDLNLIGQFGVGFYSVYLVADYVEV+
Sbjct: 181 RDRGI--------------------AFVEKMQTGGDLNLIGQFGVGFYSVYLVADYVEVI 220
Query: 692 SKHNDDKQYVWESKADGSFAISEDTWNEPLGRGTEIKLHLRDEAKEYLEEGKLKDLVKKY 871
SKHNDDKQ+VWESKADGSFAISEDTWNEPLGRGTEI+LHLRDEAKEY+EE KLKDLVKKY
Sbjct: 221 SKHNDDKQHVWESKADGSFAISEDTWNEPLGRGTEIRLHLRDEAKEYVEEDKLKDLVKKY 280
Query: 872 SEFINFPIYLWATKEVDVEVPADEEESNE---EEESTTETTEEEETEDDEEKKPKTKTVK 1042
SEFINFPIYLWATKEVDVEVPADE+ES+E EEES+ E+TEEEETE+ EEKKPKTKTVK
Sbjct: 281 SEFINFPIYLWATKEVDVEVPADEDESSESSEEEESSPESTEEEETEESEEKKPKTKTVK 340
Query: 1043 ETTTEWELLNDMKAVWLRSPKEVTEEEYAKFYHSLAKDFGDDKPMSWSHFSAEGDVEFKA 1222
ETTTEWELLND+KA+WLRSPKEVTEEEY KFYHSLAKDFGDDKP+SWSHF+AEGDVEFKA
Sbjct: 341 ETTTEWELLNDVKAIWLRSPKEVTEEEYTKFYHSLAKDFGDDKPLSWSHFTAEGDVEFKA 400
Query: 1223 LLFVPPKAPHDLYESYYNANKSNLKLYVRRVFISDEFDDLLPKYLSFLMGIVDSDTLPLN 1402
LLFVPPKAPHDLYESYYN+NKSNLKLYVRRVFISDEFD+LLPKYLSFL G+VDSDTLPLN
Sbjct: 401 LLFVPPKAPHDLYESYYNSNKSNLKLYVRRVFISDEFDELLPKYLSFLKGLVDSDTLPLN 460
Query: 1403 VSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPDEYSNKEKTDDEKSAMEEKKGQYAK 1582
VSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPDEYSNK+KTD+EKSAMEEKKGQYAK
Sbjct: 461 VSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPDEYSNKDKTDEEKSAMEEKKGQYAK 520
Query: 1583 FWNEFGKSVKLGIIEDATNRNRLAKLLRFESSKSDGKLVSLDEYISRMKSGQKDIFYLTG 1762
FWNEFGKSVKLGIIEDATNRNRLAKLLRFES+KS+GKL SLDEYISRMK GQKDIFY+TG
Sbjct: 521 FWNEFGKSVKLGIIEDATNRNRLAKLLRFESTKSEGKLASLDEYISRMKPGQKDIFYITG 580
Query: 1763 SSKEQLEKSPFLEQLTKKNYEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSK 1942
SSKEQLEKSPFLE+LTKKNYEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSK
Sbjct: 581 SSKEQLEKSPFLERLTKKNYEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSK 640
Query: 1943 LKDLKESFKELTDWWKKALDTEGIDSVKISNRLHNTPCVVVTSKYGWSSNMEKIMQAQTL 2122
LKDLKESFKELTDWWKKALDTE +DSVKISNRL +TPCVVVTSKYGWS+NMEKIMQ+QTL
Sbjct: 641 LKDLKESFKELTDWWKKALDTESVDSVKISNRLSDTPCVVVTSKYGWSANMEKIMQSQTL 700
Query: 2123 SDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDSDSEGLKQTARLVYQTALMESGFNLP 2302
SDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDS+SE LKQTA+LVYQTALMESGFNLP
Sbjct: 701 SDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDSESESLKQTAKLVYQTALMESGFNLP 760
Query: 2303 DPKDFASSIYRSVQKSLDLSPDAAVEEEEEVEEPEVEEKESAKQEAEEPEHEQYDKDEL 2479
DPKDFASSIYRSVQKSLDLSPDAAVEEEEEVEE EVEEKES+ + EE E YDKDEL
Sbjct: 761 DPKDFASSIYRSVQKSLDLSPDAAVEEEEEVEEAEVEEKESSNIK-EEAEPSSYDKDEL 818
9636.m03953|protein Similar to heat shock protein 82
Length = 699
Score = 690 bits (1761), Expect = 0.0
Identities = 350/725 (48%), Positives = 502/725 (68%), Gaps = 4/725 (0%)
Frame = +2
Query: 269 LRNSAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEVMGE 448
+ + E F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF +LTDK +
Sbjct: 1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 60
Query: 449 GDTAKLEIQIKLDKENKILSIRDRGVGMTKEDLIKNLGTIAKSGTSAFVEKMQTGGDLNL 628
+L I I DK + LSI D G+GMTK DL+ NLGTIA+SGT F+E + G D+++
Sbjct: 61 --QPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSM 118
Query: 629 IGQFGVGFYSVYLVADYVEVVSKHNDDKQYVWESKADGSFAISEDTWNEPLGRGTEIKLH 808
IGQFGVGFYS YLVA+ V V +KHNDD+QYVWES+A GSF ++ DT E LGRGT+I L+
Sbjct: 119 IGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLY 178
Query: 809 LRDEAKEYLEEGKLKDLVKKYSEFINFPIYLWATKEVDVEVPADEEESNEEEESTTETTE 988
L+D+ EYLEE +LKDL+KK+SEFI++PI LW K + E+ DE+E EE++ E
Sbjct: 179 LKDDQLEYLEERRLKDLIKKHSEFISYPISLWTEKTTEKEISDDEDE--EEKKDAEEGKV 236
Query: 989 EEETEDDEEKKPKTKTVKETTTEWELLNDMKAVWLRSPKEVTEEEYAKFYHSLAKDFGDD 1168
E+ E+ EEK+ K K +KE + EW L+N K +W+R P+E+T+EEYA FY SL D+ +
Sbjct: 237 EDVDEEKEEKEKKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDW--E 294
Query: 1169 KPMSWSHFSAEGDVEFKALLFVPPKAPHDLYESYYNANKSNLKLYVRRVFISDEFDDLLP 1348
+ ++ HFS EG +EFKA+LFVP +AP DL+++ N N+KLYVRRVFI D ++L+P
Sbjct: 295 EHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKLN--NIKLYVRRVFIMDNCEELIP 352
Query: 1349 KYLSFLMGIVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPDEYSNKE 1528
++LSF+ GIVDS+ LPLN+SREMLQQ+ LK I+K L++K +++ ++AE NKE
Sbjct: 353 EWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAE-------NKE 405
Query: 1529 KTDDEKSAMEEKKGQYAKFWNEFGKSVKLGIIEDATNRNRLAKLLRFESSKSDGKLVSLD 1708
Y KF+ F K++KLGI ED+TNRN++A+LLR+ S+KS +L SL
Sbjct: 406 --------------DYNKFYEAFSKNLKLGIHEDSTNRNKIAELLRYHSTKSGDELTSLK 451
Query: 1709 EYISRMKSGQKDIFYLTGSSKEQLEKSPFLEQLTKKNYEVIYFTDPVDEYLMQYLMDYED 1888
+Y++RMK GQ DI+Y+TG SK+ +E SPFLE+L KK YEV+Y D +DEY + L ++E
Sbjct: 452 DYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEG 511
Query: 1889 KKFQNVSKEGLKLGKD----SKLKDLKESFKELTDWWKKALDTEGIDSVKISNRLHNTPC 2056
KK + +KEGLKL + + ++LKE F+ L K+ L + ++ V +S+R+ ++PC
Sbjct: 512 KKLVSATKEGLKLDESEDEKKRKEELKEKFEGLCKVIKEVLG-DKVEKVVVSDRVVDSPC 570
Query: 2057 VVVTSKYGWSSNMEKIMQAQTLSDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDSDSE 2236
+VT +YGW++NME+IM+AQ L D+S YM K+ +EINP + I++ELR + D + +
Sbjct: 571 CLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADADKNDK 630
Query: 2237 GLKQTARLVYQTALMESGFNLPDPKDFASSIYRSVQKSLDLSPDAAVEEEEEVEEPEVEE 2416
+K L+++TAL+ SGF+L DP F S I+R ++ L + D E + ++ E +
Sbjct: 631 SVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSIDEDETAEADTDMPPLEDDA 690
Query: 2417 KESAKQEAE 2443
ES +E +
Sbjct: 691 GESKMEEVD 699
9637.m02719|protein Similar to heat shock protein 82
Length = 699
Score = 686 bits (1751), Expect = 0.0
Identities = 348/725 (48%), Positives = 502/725 (69%), Gaps = 4/725 (0%)
Frame = +2
Query: 269 LRNSAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEVMGE 448
+ + E F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF +LTDK +
Sbjct: 1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 60
Query: 449 GDTAKLEIQIKLDKENKILSIRDRGVGMTKEDLIKNLGTIAKSGTSAFVEKMQTGGDLNL 628
+L I I DK + LSI D GVGMTK DL+ NLGTIA+SGT F+E + G D+++
Sbjct: 61 --QPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSM 118
Query: 629 IGQFGVGFYSVYLVADYVEVVSKHNDDKQYVWESKADGSFAISEDTWNEPLGRGTEIKLH 808
IGQFGVGFYS YLVA+ V V +KHNDD+QYVWES+A GSF ++ DT E LGRGT+I L+
Sbjct: 119 IGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLY 178
Query: 809 LRDEAKEYLEEGKLKDLVKKYSEFINFPIYLWATKEVDVEVPADEEESNEEEESTTETTE 988
L+D+ EYLEE +LKDLVKK+SEFI++PI LW K + E+ DE+E EE++ E
Sbjct: 179 LKDDQLEYLEERRLKDLVKKHSEFISYPISLWTEKTTEKEISDDEDE--EEKKDAEEGKV 236
Query: 989 EEETEDDEEKKPKTKTVKETTTEWELLNDMKAVWLRSPKEVTEEEYAKFYHSLAKDFGDD 1168
E+ E+ EEK+ K K +KE + EW ++N K +WLR P+E+T+EEYA FY SL D+ +
Sbjct: 237 EDVDEEKEEKEKKKKKIKEVSHEWNVMNKQKPIWLRKPEEITKEEYAAFYKSLTNDW--E 294
Query: 1169 KPMSWSHFSAEGDVEFKALLFVPPKAPHDLYESYYNANKSNLKLYVRRVFISDEFDDLLP 1348
+ ++ HFS EG +EFKA+LFVP +AP DL+++ ++N+KLYVRRVFI D ++L+P
Sbjct: 295 EHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKQNNIKLYVRRVFIMDNCEELIP 352
Query: 1349 KYLSFLMGIVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPDEYSNKE 1528
++LSF+ GIVDS+ LPLN+SREMLQQ+ LK I+K L++K +++ ++AE NKE
Sbjct: 353 EWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAE-------NKE 405
Query: 1529 KTDDEKSAMEEKKGQYAKFWNEFGKSVKLGIIEDATNRNRLAKLLRFESSKSDGKLVSLD 1708
Y KF+ F K++KLGI ED+TNR ++A+LLR+ S+KS +L SL
Sbjct: 406 --------------DYNKFYEAFSKNLKLGIHEDSTNRTKIAELLRYHSTKSGDELTSLK 451
Query: 1709 EYISRMKSGQKDIFYLTGSSKEQLEKSPFLEQLTKKNYEVIYFTDPVDEYLMQYLMDYED 1888
+Y++RMK GQ +I+Y+TG SK+ +E SPFLE+L KK YEV+Y D +DEY + L ++E
Sbjct: 452 DYVTRMKEGQSEIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEG 511
Query: 1889 KKFQNVSKEGLKLGKD----SKLKDLKESFKELTDWWKKALDTEGIDSVKISNRLHNTPC 2056
KK + +KEGLKL + + ++LKE F+ L K+ L + ++ V +S+R+ ++PC
Sbjct: 512 KKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLG-DKVEKVVVSDRVVDSPC 570
Query: 2057 VVVTSKYGWSSNMEKIMQAQTLSDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDSDSE 2236
+VT +YGW++NME+IM+AQ L D+S YM K+ +EINP + I+ ELR + D + +
Sbjct: 571 CLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDK 630
Query: 2237 GLKQTARLVYQTALMESGFNLPDPKDFASSIYRSVQKSLDLSPDAAVEEEEEVEEPEVEE 2416
+K L+++TAL+ SGF+L DP F + I+R ++ L + D + E + ++ E +
Sbjct: 631 SVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAEADADMPPLEDDA 690
Query: 2417 KESAKQEAE 2443
ES +E +
Sbjct: 691 GESKMEEVD 699
9632.m00078|protein Similar to heat shock protein HSP82 - maize
Length = 703
Score = 682 bits (1742), Expect = 0.0
Identities = 344/721 (47%), Positives = 498/721 (68%)
Frame = +2
Query: 284 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEVMGEGDTAK 463
E F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF +LTDK + +
Sbjct: 13 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA--QPE 70
Query: 464 LEIQIKLDKENKILSIRDRGVGMTKEDLIKNLGTIAKSGTSAFVEKMQTGGDLNLIGQFG 643
L I++ K +K LSI D GVGMTK DL+ NLGTIA+SGT F+E +Q G D+++IGQFG
Sbjct: 71 LFIRLVPYKPSKTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 130
Query: 644 VGFYSVYLVADYVEVVSKHNDDKQYVWESKADGSFAISEDTWNEPLGRGTEIKLHLRDEA 823
VGFYS YLVA+ V V +KHNDD+QYVWES+A GSF ++ DT E LGRGT+I L L+D+
Sbjct: 131 VGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTLDTAGERLGRGTKITLFLKDDQ 190
Query: 824 KEYLEEGKLKDLVKKYSEFINFPIYLWATKEVDVEVPADEEESNEEEESTTETTEEEETE 1003
EYLEE +LKDLVKK+SEFI++PIYLW+ K + E+ DE++ ++ + + + EE +
Sbjct: 191 LEYLEERRLKDLVKKHSEFISYPIYLWSEKTTEKEISDDEDDDIDDSKGKEKEGDIEEVK 250
Query: 1004 DDEEKKPKTKTVKETTTEWELLNDMKAVWLRSPKEVTEEEYAKFYHSLAKDFGDDKPMSW 1183
D K K K V E + EW +N K +WLR P+E++ EEYA FY SL D+ D ++
Sbjct: 251 D----KKKKKKVNEVSHEWVQINKQKPIWLRKPEEISREEYASFYKSLTNDWEDH--LAV 304
Query: 1184 SHFSAEGDVEFKALLFVPPKAPHDLYESYYNANKSNLKLYVRRVFISDEFDDLLPKYLSF 1363
HFS EG +EFKA+LFVP +AP DL+++ N N+KLYVRRVFI D ++L+P++L F
Sbjct: 305 KHFSVEGQLEFKAILFVPRRAPFDLFDTRKKMN--NIKLYVRRVFIMDNCEELIPEWLGF 362
Query: 1364 LMGIVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPDEYSNKEKTDDE 1543
+ G+VDSD LPLN+SREMLQQ+ LK I+K L++K ++M ++A+ NKE
Sbjct: 363 VKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFFEIAD-------NKE----- 410
Query: 1544 KSAMEEKKGQYAKFWNEFGKSVKLGIIEDATNRNRLAKLLRFESSKSDGKLVSLDEYISR 1723
YAKF+ F K++KLGI ED+ NR +LA LLR+ S+KS +L SL +Y++R
Sbjct: 411 ---------DYAKFYEAFSKNLKLGIHEDSQNRGKLADLLRYHSTKSGNELTSLKDYVTR 461
Query: 1724 MKSGQKDIFYLTGSSKEQLEKSPFLEQLTKKNYEVIYFTDPVDEYLMQYLMDYEDKKFQN 1903
MK GQK+++Y+TG S++ +E SPFLE+L KK YEV++ D +DEY + L +Y+ KK +
Sbjct: 462 MKEGQKEVYYITGESRKAVENSPFLEKLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVS 521
Query: 1904 VSKEGLKLGKDSKLKDLKESFKELTDWWKKALDTEGIDSVKISNRLHNTPCVVVTSKYGW 2083
+KEGLKL D K+ K SF+ L K L + ++ V +S+R+ ++PC +VT +YGW
Sbjct: 522 ATKEGLKLDDDDDAKERKRSFEPLCKVIKDILG-DRVEKVVVSDRIVDSPCCLVTGEYGW 580
Query: 2084 SSNMEKIMQAQTLSDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDSDSEGLKQTARLV 2263
++NME+IM+AQ L D+S AYM K+ +EINP + I++ELR + D++ + ++ L+
Sbjct: 581 TANMERIMKAQALRDSSMGAYMSSKKTMEINPENGIMEELRKRADADANDKSVRDLVLLL 640
Query: 2264 YQTALMESGFNLPDPKDFASSIYRSVQKSLDLSPDAAVEEEEEVEEPEVEEKESAKQEAE 2443
++TAL+ SGF+L DP FA+ I+R ++ L++ D A +++ + P +++ + + + E
Sbjct: 641 FETALLTSGFSLDDPNTFAARIHRMLKLGLNIDDDDAAAADDDADMPALDDAAAEESKME 700
Query: 2444 E 2446
E
Sbjct: 701 E 701
9637.m02656|protein heat-shock protein, 82K, precursor - rye
Length = 791
Score = 623 bits (1590), Expect = e-178
Identities = 340/732 (46%), Positives = 482/732 (65%), Gaps = 13/732 (1%)
Frame = +2
Query: 278 SAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEVMGEGDT 457
+ E+FE+QAEVSRL+D+I++SLYS+K++FLREL+SNASDALDK+RFL++TD V+ +G
Sbjct: 81 AGEQFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTDSSVLSDG-- 138
Query: 458 AKLEIQIKLDKENKILSIRDRGVGMTKEDLIKNLGTIAKSGTSAFV----EKMQTGGDLN 625
+LEI+IK D E ++I D G+GMTK++L LGTIA+SGTS F+ E G D
Sbjct: 139 GELEIRIKPDPEAGTITITDTGIGMTKDELKDCLGTIAQSGTSKFLKALKENKDLGADNG 198
Query: 626 LIGQFGVGFYSVYLVADYVEVVSKH-NDDKQYVWESKADGS-FAISEDTWNEP-LGRGTE 796
LIGQFGVGFYS +LVA+ V V +K DKQYVWE+ AD S + I E+T E L RGT+
Sbjct: 199 LIGQFGVGFYSAFLVAEKVVVSTKSPKADKQYVWEAMADSSSYVIKEETDPEKMLTRGTQ 258
Query: 797 IKLHLRDEAK-EYLEEGKLKDLVKKYSEFINFPIYLWATKEVDVEVPADEEESNEEEEST 973
I L LRD+ K E+ + G+++ LVK YS+F++FPIY W K VEV +EEE E EE+T
Sbjct: 259 ITLFLRDDDKYEFADPGRIQGLVKNYSQFVSFPIYTWQEKSRTVEV--EEEEPKEGEEAT 316
Query: 974 TETTEEEETEDDEEKKPKTKTVKETTTEWELLNDMKAVWLRSPKEVTEEEYAKFYHSLAK 1153
+ EKK K KT+ E +WEL N+ K +W+R+PKEV + EY +FY
Sbjct: 317 -----------EGEKKKKKKTITEKYWDWELANETKPIWMRNPKEVEKTEYNEFYKKAFN 365
Query: 1154 DFGDDKPMSWSHFSAEGDVEFKALLFVPPKAPHDLYESYYNANKSNLKLYVRRVFISDEF 1333
+F D P++++HF+ EG+VEF+++L++P AP E N N++LYV+RVFISD+F
Sbjct: 366 EFLD--PLAYTHFTTEGEVEFRSVLYIPGMAPLS-NEEIMNPKTKNIRLYVKRVFISDDF 422
Query: 1334 D-DLLPKYLSFLMGIVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPD 1510
D +L P+YLSF+ G+VDS+ LPLNVSRE+LQ+ ++ ++K+L+RK DMI+++AE+
Sbjct: 423 DGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQEIAEK--- 479
Query: 1511 EYSNKEKTDDEKSAMEEKKGQYAKFWNEFGKSVKLGIIEDATNRNRLAKLLRFESSKSDG 1690
E K Y KFW FGK VKLG IED N RLA LLRF SSK++
Sbjct: 480 ----------------EDKEDYKKFWESFGKFVKLGCIEDTGNHKRLAPLLRFYSSKNET 523
Query: 1691 KLVSLDEYISRMKSGQKDIFYLTGSSKEQLEKSPFLEQLTKKNYEVIYFTDPVDEYLMQY 1870
L+SLD+Y+ M QK I+Y+ S + + +PFLE+L +K+ EV+Y +P+DE +Q
Sbjct: 524 DLISLDQYVENMPENQKAIYYIATDSLQSAKTAPFLEKLVQKDIEVLYLIEPIDEVAIQN 583
Query: 1871 LMDYEDKKFQNVSKEGLKLG--KDSKLKDLKESFKELTDWWKKALDTEGIDSVKISNRLH 2044
L Y++KKF ++SKE L+LG + K + K+ + L DW K+ L + + V+ISNRL
Sbjct: 584 LQTYKEKKFVDISKEDLELGDEDEDKENESKQEYTLLCDWIKQQLG-DKVAKVQISNRLS 642
Query: 2045 NTPCVVVTSKYGWSSNMEKIMQAQTLSDASKQAYMRGKRVLEINPRHPIIKELRDKVAQD 2224
++PCV+V+ K+GWS+NME++M+AQTL D S +MRG+R+ EINP HPI+K+L +
Sbjct: 643 SSPCVLVSGKFGWSANMERLMKAQTLGDTSSLEFMRGRRIFEINPDHPIVKDLSAACKNE 702
Query: 2225 SDSEGLKQTARLVYQTALMESGFNLPDPKDFASSIYRSVQKSLDLSPDAAVEEEEEVEEP 2404
+S K+ L+Y+TAL+ SG+ P + IY + +L E E E
Sbjct: 703 PESTEAKRAVELLYETALISSGYTPDSPAELGGKIYEMMTIALGGRWGRPEESEAATSES 762
Query: 2405 --EVEEKESAKQEAEEPEHEQYDKD 2473
EVE E + E EP + + D
Sbjct: 763 NVEVESSEGSATEVVEPSEVRPESD 787
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180740190
Number of Sequences: 59712
Number of extensions: 5612884
Number of successful extensions: 125529
Number of sequences better than 1.0e-10: 20
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125405
Number of HSP's gapped (non-prelim): 23
length of query: 976
length of database: 26,991,925
effective HSP length: 54
effective length of query: 921
effective length of database: 23,767,477
effective search space: 21889846317
effective search space used: 21889846317
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 163 (67.9 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG107 Members:97 3pri:Y .068
NP_702115.1 hypothetical protein [Plasmodium falciparum 3D7]
gb|AAN36839.1|AE014819_50 hypothetical protein [Plasmodium fa
(541 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
***** No hits found ******
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32733806
Number of Sequences: 59712
Number of extensions: 873249
Number of successful extensions: 10589
Number of sequences better than 1.0e-10: 0
Number of HSP's better than 0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10589
Number of HSP's gapped (non-prelim): 0
length of query: 180
length of database: 26,991,925
effective HSP length: 49
effective length of query: 130
effective length of database: 24,066,037
effective search space: 3128584810
effective search space used: 3128584810
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 155 (64.8 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG116 Members:329 3pri:Y 2e-46
S53050 RNA binding protein - barley emb|CAA88558.1| glycine
rich protein, RNA binding protein [Hordeum vulgare subsp.
(1004 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m04543|protein retrotransposon protein, putative, Ty... 261 1e-69
9640.m04293|protein Similar to glycine-rich RNA-binding p... 259 7e-69
9631.m04544|protein retrotransposon protein, putative, Ty... 210 3e-54
9640.m03081|protein Similar to RNA-binding protein - wood... 209 7e-54
9635.m04113|protein Similar to 162587 RNA-binding glycine... 160 3e-39
9630.m01170|protein RNA recognition motif. (a.k.a. RRM, R... 152 1e-36
9631.m06121|protein putative RNA binding protein 150 3e-36
9629.m06835|protein Similar to glycine-rich RNA-binding p... 138 2e-32
9634.m03521|protein RNA recognition motif. (a.k.a. RRM, R... 137 3e-32
9634.m03520|protein RNA recognition motif. (a.k.a. RRM, R... 137 3e-32
9635.m00854|protein RNA recognition motif. (a.k.a. RRM, R... 131 2e-30
9634.m04025|protein transposon protein, putative, CACTA, ... 123 5e-28
9634.m02079|protein expressed protein 122 1e-27
9634.m02081|protein expressed protein 122 1e-27
9635.m03216|protein transposon protein, putative, CACTA, ... 119 7e-27
9635.m04941|protein transposon protein, putative, CACTA, ... 119 7e-27
9629.m00638|protein transposon protein, putative, CACTA, ... 119 9e-27
9629.m00637|protein transposon protein, putative, CACTA, ... 119 9e-27
9629.m00636|protein transposon protein, putative, CACTA, ... 119 9e-27
9635.m03213|protein transposon protein, putative, CACTA, ... 118 2e-26
9631.m04543|protein retrotransposon protein, putative, Ty1-copia
sub-class
Length = 162
Score = 261 bits (660), Expect = 1e-69
Identities = 130/173 (75%), Positives = 139/173 (80%), Gaps = 3/173 (1%)
Frame = +2
Query: 137 ETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQ 316
+ EYRCFVGGLAWATDD +L+AAFS YGEILD+KIINDRETGRSRGFGFVTF SE+SMR
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRD 64
Query: 317 AIEEMNGKELDGRSITVNEAQSRRSGGGGGGGGGYGGQRGGGGGYGGGGGYGGQGGGYGG 496
AIE MNGKELDGR+ITVNEAQSRRSGGGGGG GG GGGGYGG G
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRSGGGGGGYGG------------GGGGYGG------G 106
Query: 497 QGGGGYGGQGGGGYGGQRGGGGGYGGGGGGYGGGGGGYGGQRG---GGDSGGQWRS 655
+GGGGYGG GGGGYG + GG GG GG GGG GGGGGGYGG RG GGDSGG WR+
Sbjct: 107 RGGGGYGGGGGGGYGRREGGYGGGGGYGGGRGGGGGGYGGSRGGGYGGDSGGNWRN 162
9640.m04293|protein Similar to glycine-rich RNA-binding protein -
rice
Length = 162
Score = 259 bits (654), Expect = 7e-69
Identities = 129/173 (74%), Positives = 141/173 (80%), Gaps = 1/173 (0%)
Frame = +2
Query: 137 ETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQ 316
+ EYRCFVGGLAWATDD +L+AAFS +GEIL++KIINDRETGRSRGFGFVTF SE++MR
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 317 AIEEMNGKELDGRSITVNEAQSRRSGGGGGGGGGYGGQRGGGGGYGGGGGY-GGQGGGYG 493
AIE MNGKELDGR+ITVNEAQSRRSGGGGGGG GQRGGGGGYGGGGGY GG GGGYG
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRSGGGGGGG---YGQRGGGGGYGGGGGYGGGGGGGYG 121
Query: 494 GQGGGGYGGQGGGGYGGQRGGGGGYGGGGGGYGGGGGGYGGQRGGGDSGGQWRS 655
+ GGYG GGGGYGG RGGGGGYGGG G RGGG+S G WR+
Sbjct: 122 QRREGGYG--GGGGYGGGRGGGGGYGGG-----------YGSRGGGNSDGNWRN 162
9631.m04544|protein retrotransposon protein, putative, Ty1-copia
sub-class
Length = 196
Score = 210 bits (530), Expect = 3e-54
Identities = 108/153 (70%), Positives = 116/153 (75%)
Frame = +2
Query: 137 ETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQ 316
+ EYRCFVGGLAWATDD +L+AAFS YGEILD+KIINDRETGRSRGFGFVTF SE+SMR
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRD 64
Query: 317 AIEEMNGKELDGRSITVNEAQSRRSGGGGGGGGGYGGQRGGGGGYGGGGGYGGQGGGYGG 496
AIE MNGKELDGR+ITVNEAQSRRSGGGGGG G GGGGGYGGG G GGGYGG
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRSGGGGGGYG------GGGGGYGGGRG----GGGYGG 114
Query: 497 QGGGGYGGQGGGGYGGQRGGGGGYGGGGGGYGG 595
GGGGYG + GG G GG + G
Sbjct: 115 GGGGGYGRREGGYAVAAATAATPAGTGGTDWWG 147
9640.m03081|protein Similar to RNA-binding protein - wood tobacco
Length = 258
Score = 209 bits (526), Expect = 7e-54
Identities = 107/165 (64%), Positives = 126/165 (75%), Gaps = 22/165 (13%)
Frame = +2
Query: 149 RCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 328
+ FVGGL++ TD+ +L+ F+ YG++++AKIINDRETGRSRGFGF+T+ S E AI
Sbjct: 32 KLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAITA 91
Query: 329 MNGKELDGRSITVNEAQSR----RSGGGGGGGGGYGGQRG--GGGGYGGGGGYGGQGGGY 490
++GK+LDGR+I VN A R RSGGGG GGGGYGG G GGGGY GGGGYGG G
Sbjct: 92 LDGKDLDGRNIRVNTANERTGGFRSGGGGYGGGGYGGGGGGYGGGGYSGGGGYGGGGYSG 151
Query: 491 GGQGGGGYGGQGGGGYGGQRGGGGGYGGGGGGYG--------------GGGGGYGGQRGG 628
GG GGGGY G GGGGYGG GG G GGGGGGYG GG G +GG G
Sbjct: 152 GGGGGGGYQG-GGGGYGGNNGGYGNRGGGGGGYGVAEGSADAFSGINLGGDGSFGGNPAG 210
Query: 629 --GDSGG 643
GD+GG
Sbjct: 211 SFGDAGG 217
9635.m04113|protein Similar to 162587 RNA-binding glycine rich
protein
Length = 474
Score = 160 bits (401), Expect = 3e-39
Identities = 88/164 (53%), Positives = 111/164 (67%), Gaps = 41/164 (25%)
Frame = +2
Query: 149 RCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 328
+ FVGGL++ATDD L+ FS YG++L+A+II DR+TG+S+G+GF+T+ S E A+
Sbjct: 32 KLFVGGLSYATDDTTLKDVFSHYGDVLEARIIIDRDTGKSKGYGFITYTSSEEAAAAVTA 91
Query: 329 MNGKELDGRSITVNEAQSRRSGGGGGGGGGYGGQRGGGGGYGGGGGYG----GQGGGYGG 496
M+GK+L GR + V+ A R G GGGG G GG G GGGY GGGYG G+GGGY G
Sbjct: 92 MDGKDLQGRIVRVSTANDRAGGIRGGGGFGAGGY-GSGGGYSSGGGYGTGEYGRGGGYAG 150
Query: 497 QGGGG-----YGGQGGGGYGGQ---------RGGGGGYGG-------------------- 574
GG G YGG G GGY G GGYG
Sbjct: 151 NGGYGGRASEYGGYGAGGYSSSGGYNATSVLHGNAGGYGSSGVSHGNAGDYRSSDVYNTT 210
Query: 575 ---GGGGYGGGGGGYGGQRGGGDSG 640
G G + GGG+G GG +SG
Sbjct: 211 NTYGAGNFSHSGGGFGENSGGYNSG 235
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85593759
Number of Sequences: 59712
Number of extensions: 4705893
Number of successful extensions: 412161
Number of sequences better than 1.0e-10: 302
Number of HSP's better than 0.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 366700
Number of HSP's gapped (non-prelim): 6982
length of query: 334
length of database: 26,991,925
effective HSP length: 51
effective length of query: 283
effective length of database: 23,946,613
effective search space: 6776891479
effective search space used: 6776891479
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG125 Members:66 3pri:Y 6e-65
BAA96147.1 unnamed protein product [Oryza sativa (japonica
cultivar-group)] dbj|BAA96189.1| unnamed protein product [Oryz
(990 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9629.m01079|protein expressed protein 262 8e-70
9635.m00197|protein hypothetical protein 162 1e-39
9635.m00199|protein hypothetical protein 160 4e-39
9635.m00176|protein expressed protein 159 6e-39
9635.m00201|protein expressed protein 156 5e-38
9634.m03287|protein Similar to susceptibility homeodomain... 156 5e-38
9635.m00194|protein expressed protein 156 5e-38
9639.m03467|protein hypothetical protein 155 1e-37
9635.m00177|protein hypothetical protein 154 2e-37
9635.m00196|protein hypothetical protein 154 2e-37
9635.m00203|protein expressed protein 153 6e-37
9639.m03468|protein hypothetical protein 152 7e-37
9639.m03470|protein expressed protein 142 1e-33
9640.m03657|protein expressed protein 131 2e-30
9639.m04254|protein AY101534 At1g56580/F25P12_18 126 5e-29
9629.m04440|protein hypothetical protein 123 3e-28
9633.m04678|protein hypothetical protein 119 7e-27
9638.m03344|protein hypothetical protein 105 1e-22
9629.m01079|protein expressed protein
Length = 167
Score = 262 bits (662), Expect = 8e-70
Identities = 130/156 (83%), Positives = 142/156 (90%), Gaps = 4/156 (2%)
Frame = +2
Query: 188 AQAIEAQREGAEVYHGAALCAEKAVELLAETNMPLGLLPLADMEEVGYNRATGFVWLRQK 367
+QAIEA REGAEVYHGAALCAEKAVELLAE +MPLGLLPLA+MEEVGYNRATGFVWLRQK
Sbjct: 3 SQAIEAHREGAEVYHGAALCAEKAVELLAEIHMPLGLLPLAEMEEVGYNRATGFVWLRQK 62
Query: 368 KALTHTFKQIGRQVSYATEVTAFVEDRKMKRMTGVKSKELLIWITLCDMFIDKDDPSKIT 547
KA+THTFKQI RQVS+A EVTAFVEDR+MKR+TG K+KELLIW++L DMFIDKDD SKIT
Sbjct: 63 KAITHTFKQISRQVSFAAEVTAFVEDRRMKRVTGAKTKELLIWVSLSDMFIDKDDASKIT 122
Query: 548 FKTPTGLGRTFPVSAFEKKDDAK----ATAAAAGGKEAVV 655
FKTPTGLGRT+PV AF K+DD K A AAAA GKE V
Sbjct: 123 FKTPTGLGRTYPVDAFAKEDDGKGKVPAAAAAANGKETAV 162
9635.m00197|protein hypothetical protein
Length = 357
Score = 162 bits (405), Expect = 1e-39
Identities = 77/137 (56%), Positives = 103/137 (74%), Gaps = 1/137 (0%)
Frame = +2
Query: 185 MAQAIEAQREGAEVYHGAALCAEKAVELLAETNMPLGLLPLADMEEVGYNRATGFVWLRQ 364
MA IE+ R GAE+ +G A+C +K++ELL E +P GLLPL D+EE GYNR TGF+WL Q
Sbjct: 1 MASQIESHRSGAEIVNGDAICRKKSIELLEELGLPKGLLPLEDIEEFGYNRGTGFMWLVQ 60
Query: 365 KKA-LTHTFKQIGRQVSYATEVTAFVEDRKMKRMTGVKSKELLIWITLCDMFIDKDDPSK 541
KK + HTFK+I + VSYA EVTAF E K+K++TGVK+KELL+W+++ +++I P K
Sbjct: 61 KKKKIEHTFKKIKQTVSYANEVTAFTEKGKLKKITGVKTKELLLWLSVVEVYITDASPDK 120
Query: 542 ITFKTPTGLGRTFPVSAF 595
+TFKT TGL TF +AF
Sbjct: 121 VTFKTGTGLSDTFDAAAF 138
9635.m00199|protein hypothetical protein
Length = 142
Score = 160 bits (400), Expect = 4e-39
Identities = 76/137 (55%), Positives = 103/137 (74%), Gaps = 1/137 (0%)
Frame = +2
Query: 185 MAQAIEAQREGAEVYHGAALCAEKAVELLAETNMPLGLLPLADMEEVGYNRATGFVWLRQ 364
MA IE+ R GAE+ +G A+C K++ELL E +P GLLPL D+EE GYNR TGF+WL Q
Sbjct: 1 MASQIESHRSGAEIINGDAICRNKSIELLEELGLPKGLLPLEDIEEFGYNRDTGFMWLVQ 60
Query: 365 -KKALTHTFKQIGRQVSYATEVTAFVEDRKMKRMTGVKSKELLIWITLCDMFIDKDDPSK 541
KK + HTFK+I + VSYA EVTAFVE K+K++ GVK+KELL+W+++ ++++ + P K
Sbjct: 61 RKKKIEHTFKKIKQTVSYAGEVTAFVEKGKLKKIAGVKTKELLLWLSVVEVYVTEASPEK 120
Query: 542 ITFKTPTGLGRTFPVSAF 595
+TFKT TGL TF +AF
Sbjct: 121 VTFKTGTGLSDTFDAAAF 138
9635.m00176|protein expressed protein
Length = 142
Score = 159 bits (399), Expect = 6e-39
Identities = 77/137 (56%), Positives = 103/137 (74%), Gaps = 1/137 (0%)
Frame = +2
Query: 185 MAQAIEAQREGAEVYHGAALCAEKAVELLAETNMPLGLLPLADMEEVGYNRATGFVWLRQ 364
MA IE R GAEV +G A+C ++++ELL E +P GLLPL D+EE GYNR TGF+WL Q
Sbjct: 1 MASQIENHRSGAEVVNGDAICRKRSIELLGELGLPKGLLPLEDIEEFGYNRDTGFMWLVQ 60
Query: 365 KKA-LTHTFKQIGRQVSYATEVTAFVEDRKMKRMTGVKSKELLIWITLCDMFIDKDDPSK 541
KK + HTFK+I + VSYA EVTAFVE K+K++TGVK+KELL+W+++ ++++ P K
Sbjct: 61 KKKKIEHTFKKIKQTVSYAREVTAFVEKGKLKKITGVKTKELLLWLSVVEVYLADASPEK 120
Query: 542 ITFKTPTGLGRTFPVSAF 595
+TFKT TGL TF +AF
Sbjct: 121 VTFKTGTGLSDTFDAAAF 138
9635.m00201|protein expressed protein
Length = 142
Score = 156 bits (391), Expect = 5e-38
Identities = 74/137 (54%), Positives = 103/137 (75%), Gaps = 1/137 (0%)
Frame = +2
Query: 185 MAQAIEAQREGAEVYHGAALCAEKAVELLAETNMPLGLLPLADMEEVGYNRATGFVWLRQ 364
MA IE+ R AE+ +G A+C +K++ELL E +P GLLPL D+EE GYNR TGF+W+ Q
Sbjct: 1 MASQIESHRASAEIVNGDAICRKKSIELLEELGLPKGLLPLEDIEEFGYNRDTGFMWMVQ 60
Query: 365 -KKALTHTFKQIGRQVSYATEVTAFVEDRKMKRMTGVKSKELLIWITLCDMFIDKDDPSK 541
KK + HTFK+I + VSYA EVTAFVE K+K++TGVK+KELL+W+++ ++++ + P K
Sbjct: 61 RKKKIEHTFKKIKQTVSYAGEVTAFVEKGKLKKITGVKTKELLLWLSVVEVYVAEASPEK 120
Query: 542 ITFKTPTGLGRTFPVSAF 595
+TFKT TGL F +AF
Sbjct: 121 VTFKTGTGLSDNFDATAF 138
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66729402
Number of Sequences: 59712
Number of extensions: 2295422
Number of successful extensions: 67237
Number of sequences better than 1.0e-10: 36
Number of HSP's better than 0.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67196
Number of HSP's gapped (non-prelim): 25
length of query: 330
length of database: 26,991,925
effective HSP length: 51
effective length of query: 278
effective length of database: 23,946,613
effective search space: 6657158414
effective search space used: 6657158414
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG152 Members:15 3pri:Y 6e-41
CAB65536.1 proline-rich protein [Zea mays]
(962 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9638.m00510|protein expressed protein 245 1e-64
9638.m00512|protein expressed protein 243 4e-64
9638.m00513|protein Similar to proline-rich protein 242 8e-64
9638.m00511|protein expressed protein 236 4e-62
9638.m00508|protein expressed protein 226 5e-59
9638.m00499|protein proline-rich protein, putative 192 6e-49
9638.m00501|protein proline-rich protein, putative 191 1e-48
9638.m00495|protein expressed protein 190 2e-48
9638.m00488|protein expressed protein 180 3e-45
9638.m00506|protein expressed protein 180 4e-45
9638.m00492|protein expressed protein 177 2e-44
9638.m00504|protein Putative proline-rich protein 166 4e-41
9631.m01353|protein expressed protein 165 1e-40
9638.m00497|protein proline-rich protein, putative 157 3e-38
9631.m01354|protein expressed protein 122 1e-27
9638.m00510|protein expressed protein
Length = 224
Score = 245 bits (618), Expect = 1e-64
Identities = 136/193 (70%), Positives = 156/193 (80%), Gaps = 33/193 (17%)
Frame = +2
Query: 29 APRALVLAVLLAVVFANA---EAASVVVGLAKCADCTRKNIKAQEAFKGLQVAVKCKNVH 199
APR LVL + AV+ A A EAASVVVG AKCADCTRKN+KA++AFK LQVA+KCKN +
Sbjct: 4 APRGLVLLGVCAVLMAVAVGGEAASVVVGTAKCADCTRKNMKAEDAFKNLQVAIKCKNGN 63
Query: 200 GDYESKAVGALDSTGAFSVPLAADLHGADCVAQLHSAASNAPCPGQKPSKIVPVSEGTTF 379
G+YESKA G LD TGAFSVPL ADLH +DC+AQLHSA +N PCPGQ+PSKIVP+SEGT F
Sbjct: 64 GEYESKATGKLDGTGAFSVPLDADLHSSDCIAQLHSA-TNEPCPGQEPSKIVPMSEGT-F 121
Query: 380 GIVAGDNVVMPSAASPECASMTLCGPIKKHIMEHFHHKKPVPPKPEPKPE-----PHPDN 544
VAG S CAS+T+CGPIKK I++HFH KKPVPPKPEPKPE P P++
Sbjct: 122 AAVAGKT----HYRSALCASVTICGPIKKKIIDHFH-KKPVPPKPEPKPEPPKPKPEPEH 176
Query: 545 ------------------------GPVPKPEPKPQPHPDYH-PVPP 607
P PKPEPKPQP P+YH P PP
Sbjct: 177 PFLDHIHKKEKHFFDHFHKKPVPPKPEPKPEPKPQPAPEYHNPSPP 222
9638.m00512|protein expressed protein
Length = 229
Score = 243 bits (613), Expect = 4e-64
Identities = 136/193 (70%), Positives = 155/193 (79%), Gaps = 37/193 (19%)
Frame = +2
Query: 29 APRALVLAVLLAVVFANA---EAASVVVGLAKCADCTRKNIKAQEAFKGLQVAVKCKNVH 199
APR LVL + AV+ A A EAASVVVG AKCADCTRKN+KA++AFK LQVA+KCKN +
Sbjct: 4 APRGLVLLGVCAVLMAVAVGGEAASVVVGTAKCADCTRKNMKAEDAFKNLQVAIKCKNTN 63
Query: 200 GDYESKAVGALDSTGAFSVPLAADLHGADCVAQLHSAASNAPCPGQKPSKIVPVSEGTTF 379
G+YESKA G LD TGAFSVPL ADL +DC+AQLHS A+N PCPGQ+PSKIVP+SEG TF
Sbjct: 64 GEYESKAAGKLDGTGAFSVPLDADLDSSDCIAQLHS-ANNEPCPGQEPSKIVPMSEG-TF 121
Query: 380 GIVAGDNVVMPSAASPECASMTLCGPIKKHIMEHFHHKKPVPPKPEPKPE---------- 529
+AG PSA CAS T+CGPIKK I++HF HKKPVPPKPEPKPE
Sbjct: 122 VAIAG-KTHYPSAL---CASATICGPIKKKIIDHF-HKKPVPPKPEPKPEPPKPKPEPEH 176
Query: 530 -----------------------PHPDNGPVPKPEPKPQPHPDYH-PVPP 607
P P+ P PKPEPKPQP P+YH P PP
Sbjct: 177 PFLDHIHKKEKHFFDHFHKKPVPPKPEPKPEPKPEPKPQPAPEYHNPSPP 226
9638.m00513|protein Similar to proline-rich protein
Length = 229
Score = 242 bits (611), Expect = 8e-64
Identities = 136/193 (70%), Positives = 154/193 (79%), Gaps = 37/193 (19%)
Frame = +2
Query: 29 APRALVLAVLLAVVFANA---EAASVVVGLAKCADCTRKNIKAQEAFKGLQVAVKCKNVH 199
APR LVL + AV+ A A EAASVVVG AKCADCTRKN+KA++AFK LQVA+KCKN +
Sbjct: 4 APRGLVLLGVCAVLMAVAVGGEAASVVVGTAKCADCTRKNMKAEDAFKNLQVAIKCKNGN 63
Query: 200 GDYESKAVGALDSTGAFSVPLAADLHGADCVAQLHSAASNAPCPGQKPSKIVPVSEGTTF 379
G+YESKA G LD TG FS+PL ADLH +DCVAQLH A+N PCPGQ+PSKIVP+SEG TF
Sbjct: 64 GEYESKATGKLDGTGVFSIPLDADLHSSDCVAQLH-GATNEPCPGQEPSKIVPMSEG-TF 121
Query: 380 GIVAGDNVVMPSAASPECASMTLCGPIKKHIMEHFHHKKPVPPKPEPKPE---------- 529
VAG PSA CAS T+CGPIKK I++HF HKKPVPPKPEPKPE
Sbjct: 122 IAVAG-QTHYPSAL---CASATICGPIKKKIIDHF-HKKPVPPKPEPKPEPPKPKPEPEH 176
Query: 530 -----------------------PHPDNGPVPKPEPKPQPHPDYH-PVPP 607
P P+ P PKPEPKPQP P+YH P PP
Sbjct: 177 PFLDHIHKKEKHFFDHFHKKPVPPKPEPKPEPKPEPKPQPAPEYHNPSPP 226
9638.m00511|protein expressed protein
Length = 229
Score = 236 bits (596), Expect = 4e-62
Identities = 129/193 (66%), Positives = 152/193 (77%), Gaps = 37/193 (19%)
Frame = +2
Query: 29 APRALVL---AVLLAVVFANAEAASVVVGLAKCADCTRKNIKAQEAFKGLQVAVKCKNVH 199
APR LVL +L V+ + EAASVV+G AKCADCTRKN+KA++AFK LQVA+KCKN +
Sbjct: 4 APRGLVLLGVCAVLMVLAVSGEAASVVIGTAKCADCTRKNMKAEDAFKNLQVAIKCKNGN 63
Query: 200 GDYESKAVGALDSTGAFSVPLAADLHGADCVAQLHSAASNAPCPGQKPSKIVPVSEGTTF 379
G+YESKA G LD +GAFSVPL DLH +DC+AQLHS A+N PCPGQ+PSKIVP+SEG TF
Sbjct: 64 GEYESKAAGKLDGSGAFSVPLDTDLHSSDCIAQLHS-ATNEPCPGQEPSKIVPLSEG-TF 121
Query: 380 GIVAGDNVVMPSAASPECASMTLCGPIKKHIMEHFHHKKPVPPKPEPKPE---------- 529
VAG S S CAS T+CGPIKK I++HF HKKPVPPKP+PKPE
Sbjct: 122 VTVAGKT----SYPSALCASATICGPIKKKIIDHF-HKKPVPPKPDPKPEPPKPKPEPEH 176
Query: 530 -----------------------PHPDNGPVPKPEPKPQPHPDYH-PVPP 607
P P+ PKP+PKPQP P+YH P PP
Sbjct: 177 PILDHFHKKEKDFFDHFHKKPVPPKPEPKSEPKPQPKPQPAPEYHNPSPP 226
9638.m00508|protein expressed protein
Length = 196
Score = 226 bits (570), Expect = 5e-59
Identities = 118/191 (61%), Positives = 136/191 (70%), Gaps = 4/191 (2%)
Frame = +2
Query: 26 AAPRALVLAVLLAVVFANAEAASVVVGLAKCADCTRKNIKAQEAFKGLQVAVKCKN-VHG 202
AA R L L +L V A+ EAASVVVGLAKC DCTRKN+KA+ AFKGL+VA+KCKN G
Sbjct: 3 AAGRVLALLAVLMAVAAHGEAASVVVGLAKCGDCTRKNMKAKAAFKGLRVAIKCKNGADG 62
Query: 203 DYESKAVGALDSTGAFSVPLAADLHGADCVAQLHSAA-SNAPCPGQKPSKIVPVSEGTTF 379
+YE+KA G LD GAF VPLAADL GADCVAQLHSAA +NA CPGQ+PS+++ +SE TF
Sbjct: 63 EYETKAAGKLDGAGAFRVPLAADLRGADCVAQLHSAAHNNAACPGQEPSRVMQLSE-RTF 121
Query: 380 GIVAGDNVVMPSAASPECASMTLCGPIKKHIMEHFHHKKPVP--PKPEPKPEPHPDNGPV 553
VAG SP CAS T+C PIKKH +HFHH KP P P +P P+PHPD P
Sbjct: 122 VAVAGKT----HYVSPVCASATICEPIKKHFFDHFHHNKPAPAAPSTKPAPKPHPDQPPH 177
Query: 554 PKPEPKPQPHPDYHP 598
PKP P YHP
Sbjct: 178 PKPTPTYGTPSPYHP 192
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72841012
Number of Sequences: 59712
Number of extensions: 2790044
Number of successful extensions: 78773
Number of sequences better than 1.0e-10: 30
Number of HSP's better than 0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 78507
Number of HSP's gapped (non-prelim): 72
length of query: 320
length of database: 26,991,925
effective HSP length: 51
effective length of query: 269
effective length of database: 23,946,613
effective search space: 6441638897
effective search space used: 6441638897
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG156 Members:65 3pri:Y 4e-43
BAB78536.2 cold shock protein-1 [Triticum aestivum]
(1023 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9636.m00267|protein retrotransposon protein, putative, Ty... 323 3e-88
9630.m00199|protein Zinc knuckle, putative 247 2e-65
9629.m00638|protein transposon protein, putative, CACTA, ... 142 1e-33
9629.m00637|protein transposon protein, putative, CACTA, ... 142 1e-33
9629.m00636|protein transposon protein, putative, CACTA, ... 142 1e-33
9635.m04045|protein transposon protein, putative, CACTA, ... 139 1e-32
9635.m03216|protein transposon protein, putative, CACTA, ... 129 1e-29
9635.m03215|protein transposon protein, putative, CACTA, ... 127 2e-29
9634.m02079|protein expressed protein 123 4e-28
9636.m00068|protein transposon protein, putative, CACTA, ... 123 4e-28
9631.m01941|protein retrotransposon protein, putative, Ty... 122 8e-28
9635.m04942|protein transposon protein, putative, CACTA, ... 122 8e-28
9634.m05009|protein transposon protein, putative, CACTA, ... 122 8e-28
9635.m03213|protein transposon protein, putative, CACTA, ... 122 1e-27
9635.m04941|protein transposon protein, putative, CACTA, ... 122 1e-27
9634.m04025|protein transposon protein, putative, CACTA, ... 122 1e-27
9638.m00204|protein transposon protein, putative, CACTA, ... 122 1e-27
9629.m00785|protein transposon protein, putative, CACTA, ... 121 2e-27
9635.m04943|protein transposon protein, putative, CACTA, ... 120 5e-27
9634.m00264|protein transposon protein, putative, CACTA, ... 120 5e-27
9636.m00267|protein retrotransposon protein, putative, Ty1-copia
sub-class
Length = 197
Score = 323 bits (819), Expect = 3e-88
Identities = 149/199 (74%), Positives = 167/199 (83%)
Frame = +3
Query: 63 ERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGDDGR 242
ERVKGTVKWF+ TKGFGFI+P+DG +DLFVHQS++K+DGYRSLN+ DVVEF V +G+DGR
Sbjct: 4 ERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDGR 63
Query: 243 TKASDVTAPGGGALAGGSRPVDGGGDRGGRGGGGYGGGGYGGGGGGYGGGGGGYGGGGGG 422
TKA DVTAPGGGAL GGSRP GGGDRG GG GGGG GG GYGGGGGGYGGG G
Sbjct: 64 TKAVDVTAPGGGALTGGSRP-SGGGDRGYGGG---GGGGRYGGDRGYGGGGGGYGGGDRG 119
Query: 423 YGSGGGGGRYGGGGGGRECYKCGEEGHISRDCPQGGGGGGGGGYGGGGGRGGGGGGGGGG 602
YG GGG G GGGGG R CYKCGEEGH++RDC QGGGGGGG G GGGG RGGGGGGGGGG
Sbjct: 120 YGGGGGYGG-GGGGGSRACYKCGEEGHMARDCSQGGGGGGGYGGGGGGYRGGGGGGGGGG 178
Query: 603 CFSCGESGHFSRECPNKAH 659
C++CGE+GH +RECP+K +
Sbjct: 179 CYNCGETGHIARECPSKTY 197
9630.m00199|protein Zinc knuckle, putative
Length = 241
Score = 247 bits (625), Expect = 2e-65
Identities = 132/193 (68%), Positives = 150/193 (77%), Gaps = 47/193 (24%)
Frame = +3
Query: 66 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGDDGRT 245
R +GTVKWFN TKGFGFISP+DGS+DLFVHQS+IKADG+RSL E + VEF + +DGRT
Sbjct: 6 RHRGTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKADGFRSLAEGEQVEFAISESEDGRT 65
Query: 246 KASDVTAPGGGALAGGSRPVDGGGDRGGRGGGGYGGGGYGGGGGGYGG--------GGGG 401
KA DVT P G + GG+ GGG GG G G GGGG GGGG YGG GGGG
Sbjct: 66 KAVDVTGPDGSFVKGGA----GGGGGGGGGFGSRGGGGSGGGGRSYGGSWGGGRRSGGGG 121
Query: 402 YGGG----------------GGGYGSGGGGGRYGGGGGGRECYKCGEEGHISRDCPQGGG 533
GGG GGG G GGGGG GGGG G C+KCGE GH++RDC GG
Sbjct: 122 PGGGCFKCGESGHMARDCFNGGGVGVGGGGG--GGGGAGGGCFKCGEMGHMARDCFNSGG 179
Query: 534 GGGGGGYGGGGG----------------RGGGGGGGG--GG-----CFSCGESGHFSREC 644
GGGGGG GGGGG GGGGGGGG GG C++CGE+GH +R+C
Sbjct: 180 GGGGGGGGGGGGACYNCGETGHLARDCYNGGGGGGGGRFGGGGDRSCYNCGEAGHIARDC 239
9629.m00638|protein transposon protein, putative, CACTA, En/Spm
sub-class
Length = 500
Score = 142 bits (354), Expect = 1e-33
Identities = 81/123 (65%), Positives = 83/123 (66%), Gaps = 27/123 (21%)
Frame = +3
Query: 270 GGGALAGGSRPVDGGGDRGGRGGGGYGGGGYGGGGGGYGGGGGGY------GGGGGGYGS 431
GG GG R GGG GG GGG GGGYGGGGGGYGGGGGGY GGGGGGYG
Sbjct: 15 GGRGGGGGGRGRGGGGGGGGGYGGGGVGGGYGGGGGGYGGGGGGYGGGGRGGGGGGGYGG 74
Query: 432 GGGGGRYGGG-GGGR--------------------ECYKCGEEGHISRDCPQGGGGGGGG 548
GGGGGR GGG GGGR EC KCG GGGGGGGG
Sbjct: 75 GGGGGRGGGGRGGGRDGDWVCPDPSCGNVNFARRTECNKCGAPSPAG-----GGGGGGGG 129
Query: 549 GYGGGGGRGGGGGGGGGGCFSCGESGHFSR 638
GY GG GGGG GGG FS G G ++R
Sbjct: 130 GYNKSGG-GGGGYNRGGGDFSSGGGGGYNR 158
Score = 106 bits (262), Expect = 7e-23
Identities = 58/88 (65%), Positives = 59/88 (66%), Gaps = 5/88 (5%)
Frame = +3
Query: 339 GGYGGGGYGGGGGGYGGGGGG--Y---GGGGGGYGSGGGGGRYGGGGGGRECYKCGEEGH 503
G YG Y GG GG GGGGGG GGGGGGYG GG GG YGGGGGG Y G G+
Sbjct: 3 GSYGSDDYRGGYGGRGGGGGGRGRGGGGGGGGGYGGGGVGGGYGGGGGG---YGGGGGGY 59
Query: 504 ISRDCPQGGGGGGGGGYGGGGGRGGGGGGGGGG 602
G GGGGGGGYGGGGG G GGGG GGG
Sbjct: 60 GG----GGRGGGGGGGYGGGGGGGRGGGGRGGG 88
Score = 98.7 bits (242), Expect = 2e-20
Identities = 66/109 (60%), Positives = 68/109 (61%), Gaps = 45/109 (41%)
Frame = +3
Query: 270 GGGALAGGSRPVDGGGDRGGRGGGGYGGG------------------------------- 356
GGG GG GGG GGRGGGG GGG
Sbjct: 60 GGGGRGGGGGGGYGGGGGGGRGGGGRGGGRDGDWVCPDPSCGNVNFARRTECNKCGAPSP 119
Query: 357 ---GYGGGGGGY---GGGGGGYGGGGGGYGSGGGGGRYGGGGGGRECYKCGEEGHISRDC 518
G GGGGGGY GGGGGGY GGG + SGGGGG GGG Y G G +
Sbjct: 120 AGGGGGGGGGGYNKSGGGGGGYNRGGGDFSSGGGGGYNRGGGD----YNSGGRGGGT--- 172
Query: 519 PQGGGGGGGGGYGGGGG--------RGGGGGGGG 596
GGGG GGGY GGG RGG GG GG
Sbjct: 173 ---GGGGRGGGYNRGGGDDRGFDDHRGGRGGYGG 203
Score = 85.0 bits (207), Expect = 2e-16
Identities = 53/104 (50%), Positives = 55/104 (51%), Gaps = 6/104 (5%)
Frame = +3
Query: 288 GGSRPVDGGGDRGGRGGGGY-----GGGGYGGGGGGY-GGGGGGYGGGGGGYGSGGGGGR 449
G P GGG G GGGGY GGGGY GGG + GGGGGY GGG Y SGG GG
Sbjct: 115 GAPSPAGGGG---GGGGGGYNKSGGGGGGYNRGGGDFSSGGGGGYNRGGGDYNSGGRGGG 171
Query: 450 YGGGGGGRECYKCGEEGHISRDCPQGGGGGGGGGYGGGGGRGGGGGGGGG 599
GGGG G Y G D +GG GG GG G RG G G
Sbjct: 172 TGGGGRGGG-YNRGGGDDRGFDDHRGGRGGYGGRDQGNNQRGDESGYDAG 220
Score = 76.9 bits (186), Expect = 6e-14
Identities = 61/123 (49%), Positives = 66/123 (53%), Gaps = 43/123 (34%)
Frame = +3
Query: 240 RTKASDVTAP-----GGGALAGGSRPVDGGGDRGGRGGGGY---GGGGYGGGGGGY---- 383
RT+ + AP GGG GG GGG RGGG + GGGGY GGG Y
Sbjct: 108 RTECNKCGAPSPAGGGGGGGGGGYNKSGGGGGGYNRGGGDFSSGGGGGYNRGGGDYNSGG 167
Query: 384 -GGGGGGYGGGGGGYGSGGG---------GGRYGGGG--------GGRECYKCGEEGHIS 509
GGG GG GG GGGY GGG GGR G GG G Y G G +
Sbjct: 168 RGGGTGG-GGRGGGYNRGGGDDRGFDDHRGGRGGYGGRDQGNNQRGDESGYDAGSYGQVP 226
Query: 510 RDCPQGGGGGGG------GGYGGGGGRGGGGG-------GGGGGCF 608
P GG GG YGG GGG G +
Sbjct: 227 PQGPPSYGGPGGDYAAPPSSYGGNNAYNSDSAVPPPSSYGGGPGSY 272
Score = 75.3 bits (182), Expect = 2e-13
Identities = 61/115 (53%), Positives = 68/115 (59%), Gaps = 75/115 (65%)
Frame = +3
Query: 255 DVTAPGGGALAGGSRPVDGGGDRGGRGGGGYGGGGYGGGG------------GGYGG--- 389
D ++ GGG G + GG GG GGGG GGG GGG GGYGG
Sbjct: 147 DFSSGGGGGYNRGGGDYNSGGRGGGTGGGGRGGGYNRGGGDDRGFDDHRGGRGGYGGRDQ 206
Query: 390 ----------------------GGGGYGGGGGGYGS-----------------------G 434
G YGG GG Y + G
Sbjct: 207 GNNQRGDESGYDAGSYGQVPPQGPPSYGGPGGDYAAPPSSYGGNNAYNSDSAVPPPSSYG 266
Query: 435 GGGGRY--------------GGGGGGRECYKCGEEG-HISRDCPQGGGGGGGGGYGGGGG 569
GG G Y GG GG+ +G + R P GGG G Y GGGG
Sbjct: 267 GGPGSYPPSYGAPPPNPPYSGGAPGGQGSLPPSYDGGYGGRPMPGGGGPGAPPPYHGGGG 326
Query: 570 RGGGGGGGGG 599
GGGGGGGGG
Sbjct: 327 GGGGGGGGGG 336
9629.m00637|protein transposon protein, putative, CACTA, En/Spm
sub-class
Length = 500
Score = 142 bits (354), Expect = 1e-33
Identities = 81/123 (65%), Positives = 83/123 (66%), Gaps = 27/123 (21%)
Frame = +3
Query: 270 GGGALAGGSRPVDGGGDRGGRGGGGYGGGGYGGGGGGYGGGGGGY------GGGGGGYGS 431
GG GG R GGG GG GGG GGGYGGGGGGYGGGGGGY GGGGGGYG
Sbjct: 15 GGRGGGGGGRGRGGGGGGGGGYGGGGVGGGYGGGGGGYGGGGGGYGGGGRGGGGGGGYGG 74
Query: 432 GGGGGRYGGG-GGGR--------------------ECYKCGEEGHISRDCPQGGGGGGGG 548
GGGGGR GGG GGGR EC KCG GGGGGGGG
Sbjct: 75 GGGGGRGGGGRGGGRDGDWVCPDPSCGNVNFARRTECNKCGAPSPAG-----GGGGGGGG 129
Query: 549 GYGGGGGRGGGGGGGGGGCFSCGESGHFSR 638
GY GG GGGG GGG FS G G ++R
Sbjct: 130 GYNKSGG-GGGGYNRGGGDFSSGGGGGYNR 158
Score = 106 bits (262), Expect = 7e-23
Identities = 58/88 (65%), Positives = 59/88 (66%), Gaps = 5/88 (5%)
Frame = +3
Query: 339 GGYGGGGYGGGGGGYGGGGGG--Y---GGGGGGYGSGGGGGRYGGGGGGRECYKCGEEGH 503
G YG Y GG GG GGGGGG GGGGGGYG GG GG YGGGGGG Y G G+
Sbjct: 3 GSYGSDDYRGGYGGRGGGGGGRGRGGGGGGGGGYGGGGVGGGYGGGGGG---YGGGGGGY 59
Query: 504 ISRDCPQGGGGGGGGGYGGGGGRGGGGGGGGGG 602
G GGGGGGGYGGGGG G GGGG GGG
Sbjct: 60 GG----GGRGGGGGGGYGGGGGGGRGGGGRGGG 88
Score = 98.7 bits (242), Expect = 2e-20
Identities = 66/109 (60%), Positives = 68/109 (61%), Gaps = 45/109 (41%)
Frame = +3
Query: 270 GGGALAGGSRPVDGGGDRGGRGGGGYGGG------------------------------- 356
GGG GG GGG GGRGGGG GGG
Sbjct: 60 GGGGRGGGGGGGYGGGGGGGRGGGGRGGGRDGDWVCPDPSCGNVNFARRTECNKCGAPSP 119
Query: 357 ---GYGGGGGGY---GGGGGGYGGGGGGYGSGGGGGRYGGGGGGRECYKCGEEGHISRDC 518
G GGGGGGY GGGGGGY GGG + SGGGGG GGG Y G G +
Sbjct: 120 AGGGGGGGGGGYNKSGGGGGGYNRGGGDFSSGGGGGYNRGGGD----YNSGGRGGGT--- 172
Query: 519 PQGGGGGGGGGYGGGGG--------RGGGGGGGG 596
GGGG GGGY GGG RGG GG GG
Sbjct: 173 ---GGGGRGGGYNRGGGDDRGFDDHRGGRGGYGG 203
Score = 85.0 bits (207), Expect = 2e-16
Identities = 53/104 (50%), Positives = 55/104 (51%), Gaps = 6/104 (5%)
Frame = +3
Query: 288 GGSRPVDGGGDRGGRGGGGY-----GGGGYGGGGGGY-GGGGGGYGGGGGGYGSGGGGGR 449
G P GGG G GGGGY GGGGY GGG + GGGGGY GGG Y SGG GG
Sbjct: 115 GAPSPAGGGG---GGGGGGYNKSGGGGGGYNRGGGDFSSGGGGGYNRGGGDYNSGGRGGG 171
Query: 450 YGGGGGGRECYKCGEEGHISRDCPQGGGGGGGGGYGGGGGRGGGGGGGGG 599
GGGG G Y G D +GG GG GG G RG G G
Sbjct: 172 TGGGGRGGG-YNRGGGDDRGFDDHRGGRGGYGGRDQGNNQRGDESGYDAG 220
Score = 76.9 bits (186), Expect = 6e-14
Identities = 61/123 (49%), Positives = 66/123 (53%), Gaps = 43/123 (34%)
Frame = +3
Query: 240 RTKASDVTAP-----GGGALAGGSRPVDGGGDRGGRGGGGY---GGGGYGGGGGGY---- 383
RT+ + AP GGG GG GGG RGGG + GGGGY GGG Y
Sbjct: 108 RTECNKCGAPSPAGGGGGGGGGGYNKSGGGGGGYNRGGGDFSSGGGGGYNRGGGDYNSGG 167
Query: 384 -GGGGGGYGGGGGGYGSGGG---------GGRYGGGG--------GGRECYKCGEEGHIS 509
GGG GG GG GGGY GGG GGR G GG G Y G G +
Sbjct: 168 RGGGTGG-GGRGGGYNRGGGDDRGFDDHRGGRGGYGGRDQGNNQRGDESGYDAGSYGQVP 226
Query: 510 RDCPQGGGGGGG------GGYGGGGGRGGGGG-------GGGGGCF 608
P GG GG YGG GGG G +
Sbjct: 227 PQGPPSYGGPGGDYAAPPSSYGGNNAYNSDSAVPPPSSYGGGPGSY 272
Score = 75.3 bits (182), Expect = 2e-13
Identities = 61/115 (53%), Positives = 68/115 (59%), Gaps = 75/115 (65%)
Frame = +3
Query: 255 DVTAPGGGALAGGSRPVDGGGDRGGRGGGGYGGGGYGGGG------------GGYGG--- 389
D ++ GGG G + GG GG GGGG GGG GGG GGYGG
Sbjct: 147 DFSSGGGGGYNRGGGDYNSGGRGGGTGGGGRGGGYNRGGGDDRGFDDHRGGRGGYGGRDQ 206
Query: 390 ----------------------GGGGYGGGGGGYGS-----------------------G 434
G YGG GG Y + G
Sbjct: 207 GNNQRGDESGYDAGSYGQVPPQGPPSYGGPGGDYAAPPSSYGGNNAYNSDSAVPPPSSYG 266
Query: 435 GGGGRY--------------GGGGGGRECYKCGEEG-HISRDCPQGGGGGGGGGYGGGGG 569
GG G Y GG GG+ +G + R P GGG G Y GGGG
Sbjct: 267 GGPGSYPPSYGAPPPNPPYSGGAPGGQGSLPPSYDGGYGGRPMPGGGGPGAPPPYHGGGG 326
Query: 570 RGGGGGGGGG 599
GGGGGGGGG
Sbjct: 327 GGGGGGGGGG 336
9629.m00636|protein transposon protein, putative, CACTA, En/Spm
sub-class
Length = 500
Score = 142 bits (354), Expect = 1e-33
Identities = 81/123 (65%), Positives = 83/123 (66%), Gaps = 27/123 (21%)
Frame = +3
Query: 270 GGGALAGGSRPVDGGGDRGGRGGGGYGGGGYGGGGGGYGGGGGGY------GGGGGGYGS 431
GG GG R GGG GG GGG GGGYGGGGGGYGGGGGGY GGGGGGYG
Sbjct: 15 GGRGGGGGGRGRGGGGGGGGGYGGGGVGGGYGGGGGGYGGGGGGYGGGGRGGGGGGGYGG 74
Query: 432 GGGGGRYGGG-GGGR--------------------ECYKCGEEGHISRDCPQGGGGGGGG 548
GGGGGR GGG GGGR EC KCG GGGGGGGG
Sbjct: 75 GGGGGRGGGGRGGGRDGDWVCPDPSCGNVNFARRTECNKCGAPSPAG-----GGGGGGGG 129
Query: 549 GYGGGGGRGGGGGGGGGGCFSCGESGHFSR 638
GY GG GGGG GGG FS G G ++R
Sbjct: 130 GYNKSGG-GGGGYNRGGGDFSSGGGGGYNR 158
Score = 106 bits (262), Expect = 7e-23
Identities = 58/88 (65%), Positives = 59/88 (66%), Gaps = 5/88 (5%)
Frame = +3
Query: 339 GGYGGGGYGGGGGGYGGGGGG--Y---GGGGGGYGSGGGGGRYGGGGGGRECYKCGEEGH 503
G YG Y GG GG GGGGGG GGGGGGYG GG GG YGGGGGG Y G G+
Sbjct: 3 GSYGSDDYRGGYGGRGGGGGGRGRGGGGGGGGGYGGGGVGGGYGGGGGG---YGGGGGGY 59
Query: 504 ISRDCPQGGGGGGGGGYGGGGGRGGGGGGGGGG 602
G GGGGGGGYGGGGG G GGGG GGG
Sbjct: 60 GG----GGRGGGGGGGYGGGGGGGRGGGGRGGG 88
Score = 98.7 bits (242), Expect = 2e-20
Identities = 66/109 (60%), Positives = 68/109 (61%), Gaps = 45/109 (41%)
Frame = +3
Query: 270 GGGALAGGSRPVDGGGDRGGRGGGGYGGG------------------------------- 356
GGG GG GGG GGRGGGG GGG
Sbjct: 60 GGGGRGGGGGGGYGGGGGGGRGGGGRGGGRDGDWVCPDPSCGNVNFARRTECNKCGAPSP 119
Query: 357 ---GYGGGGGGY---GGGGGGYGGGGGGYGSGGGGGRYGGGGGGRECYKCGEEGHISRDC 518
G GGGGGGY GGGGGGY GGG + SGGGGG GGG Y G G +
Sbjct: 120 AGGGGGGGGGGYNKSGGGGGGYNRGGGDFSSGGGGGYNRGGGD----YNSGGRGGGT--- 172
Query: 519 PQGGGGGGGGGYGGGGG--------RGGGGGGGG 596
GGGG GGGY GGG RGG GG GG
Sbjct: 173 ---GGGGRGGGYNRGGGDDRGFDDHRGGRGGYGG 203
Score = 85.0 bits (207), Expect = 2e-16
Identities = 53/104 (50%), Positives = 55/104 (51%), Gaps = 6/104 (5%)
Frame = +3
Query: 288 GGSRPVDGGGDRGGRGGGGY-----GGGGYGGGGGGY-GGGGGGYGGGGGGYGSGGGGGR 449
G P GGG G GGGGY GGGGY GGG + GGGGGY GGG Y SGG GG
Sbjct: 115 GAPSPAGGGG---GGGGGGYNKSGGGGGGYNRGGGDFSSGGGGGYNRGGGDYNSGGRGGG 171
Query: 450 YGGGGGGRECYKCGEEGHISRDCPQGGGGGGGGGYGGGGGRGGGGGGGGG 599
GGGG G Y G D +GG GG GG G RG G G
Sbjct: 172 TGGGGRGGG-YNRGGGDDRGFDDHRGGRGGYGGRDQGNNQRGDESGYDAG 220
Score = 76.9 bits (186), Expect = 6e-14
Identities = 61/123 (49%), Positives = 66/123 (53%), Gaps = 43/123 (34%)
Frame = +3
Query: 240 RTKASDVTAP-----GGGALAGGSRPVDGGGDRGGRGGGGY---GGGGYGGGGGGY---- 383
RT+ + AP GGG GG GGG RGGG + GGGGY GGG Y
Sbjct: 108 RTECNKCGAPSPAGGGGGGGGGGYNKSGGGGGGYNRGGGDFSSGGGGGYNRGGGDYNSGG 167
Query: 384 -GGGGGGYGGGGGGYGSGGG---------GGRYGGGG--------GGRECYKCGEEGHIS 509
GGG GG GG GGGY GGG GGR G GG G Y G G +
Sbjct: 168 RGGGTGG-GGRGGGYNRGGGDDRGFDDHRGGRGGYGGRDQGNNQRGDESGYDAGSYGQVP 226
Query: 510 RDCPQGGGGGGG------GGYGGGGGRGGGGG-------GGGGGCF 608
P GG GG YGG GGG G +
Sbjct: 227 PQGPPSYGGPGGDYAAPPSSYGGNNAYNSDSAVPPPSSYGGGPGSY 272
Score = 75.3 bits (182), Expect = 2e-13
Identities = 61/115 (53%), Positives = 68/115 (59%), Gaps = 75/115 (65%)
Frame = +3
Query: 255 DVTAPGGGALAGGSRPVDGGGDRGGRGGGGYGGGGYGGGG------------GGYGG--- 389
D ++ GGG G + GG GG GGGG GGG GGG GGYGG
Sbjct: 147 DFSSGGGGGYNRGGGDYNSGGRGGGTGGGGRGGGYNRGGGDDRGFDDHRGGRGGYGGRDQ 206
Query: 390 ----------------------GGGGYGGGGGGYGS-----------------------G 434
G YGG GG Y + G
Sbjct: 207 GNNQRGDESGYDAGSYGQVPPQGPPSYGGPGGDYAAPPSSYGGNNAYNSDSAVPPPSSYG 266
Query: 435 GGGGRY--------------GGGGGGRECYKCGEEG-HISRDCPQGGGGGGGGGYGGGGG 569
GG G Y GG GG+ +G + R P GGG G Y GGGG
Sbjct: 267 GGPGSYPPSYGAPPPNPPYSGGAPGGQGSLPPSYDGGYGGRPMPGGGGPGAPPPYHGGGG 326
Query: 570 RGGGGGGGGG 599
GGGGGGGGG
Sbjct: 327 GGGGGGGGGG 336
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91144873
Number of Sequences: 59712
Number of extensions: 5551378
Number of successful extensions: 542209
Number of sequences better than 1.0e-10: 375
Number of HSP's better than 0.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 194
Number of HSP's that attempted gapping in prelim test: 458564
Number of HSP's gapped (non-prelim): 9037
length of query: 341
length of database: 26,991,925
effective HSP length: 51
effective length of query: 289
effective length of database: 23,946,613
effective search space: 6920571157
effective search space used: 6920571157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG177 Members:162 3pri:Y 1e-144
Q43772 UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE
(UDP-GLUCOSE PYROPHOSPHORYLASE) (UDPGP) (UGPASE)
(2226 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9637.m03241|protein UTP--glucose-1-phosphate uridylyltran... 870 0.0
9630.m00161|protein Similar to UDP-glucose pyrophosphorylase 622 e-178
9629.m01582|protein Similar to utp--glucose-1-phosphate u... 469 e-131
9630.m02873|protein ribosomal protein L29, putative 104 5e-22
9632.m02915|protein ribosomal protein L29, putative 104 6e-22
9631.m03557|protein putative protein kinase 68 5e-11
9637.m03241|protein UTP--glucose-1-phosphate uridylyltransferase
Length = 469
Score = 870 bits (2224), Expect = 0.0
Identities = 436/469 (92%), Positives = 451/469 (95%)
Frame = +3
Query: 126 AVAADSKIDGLRDAVAKLGEISENEKAGFISLVSRYLSGEAEQIEWSKIQTPTDEVVVPY 305
AV AD K++GLR A KL +ISENEK+GFISLVSRYLSGEAEQIEWSKIQTPTDEVVVPY
Sbjct: 2 AVTADVKLEGLRAATDKLDQISENEKSGFISLVSRYLSGEAEQIEWSKIQTPTDEVVVPY 61
Query: 306 DTLAPPPEDLDAMKALLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIES 485
DTL+ PEDL+ K LLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIES
Sbjct: 62 DTLSAAPEDLNETKKLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIES 121
Query: 486 LNKKYGCSVPLLLMNSFNTHDDTQKIVEKYSNSNIEIHTFNQSQYPRIVTEDFLPLPSKG 665
LNKKYGC+VPLLLMNSFNTHDDTQKIVEKYSNSNIEIHTFNQSQYPRIVTEDFLPLPSKG
Sbjct: 122 LNKKYGCNVPLLLMNSFNTHDDTQKIVEKYSNSNIEIHTFNQSQYPRIVTEDFLPLPSKG 181
Query: 666 QTGKDGWYPPGHGDVFPSLNNSGKLDTLLSQGKEYVFVANSDNLGAIVDIKILNHLIHNQ 845
+TGKDGWYPPGHGDVFPSLNNSGKLDTLL+QGKEYVFVANSDNLGAIVDIKILNHLIHNQ
Sbjct: 182 KTGKDGWYPPGHGDVFPSLNNSGKLDTLLAQGKEYVFVANSDNLGAIVDIKILNHLIHNQ 241
Query: 846 NEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEHVDEFKSIEKFKIFNTNNLWVN 1025
NEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEHV+EFKSIEKFKIFNTNNLWVN
Sbjct: 242 NEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVN 301
Query: 1026 LKAIKRLVDAEALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFEKAIGINVPRSRFLPVK 1205
LKAIKRLV+AEALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFEKAIGINVPRSRFLPVK
Sbjct: 302 LKAIKRLVEAEALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFEKAIGINVPRSRFLPVK 361
Query: 1206 ATSDLLLVQSDLYTLVDGYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELD 1385
ATSDLLLVQSDLYTLVDG+VIRNPAR PSNPSIELGPEFKKVANFLARFKSIPSIVELD
Sbjct: 362 ATSDLLLVQSDLYTLVDGFVIRNPARTNPSNPSIELGPEFKKVANFLARFKSIPSIVELD 421
Query: 1386 SLKVSGDVSFGSGVVLKGNVTIAAKAGVKLEIPDGAVLENKDINGPEDI 1532
+LKVSGDV FGSGV LKG VTI AK+G KLEIPDGAVLENKDINGPED+
Sbjct: 422 TLKVSGDVWFGSGVTLKGKVTITAKSG-KLEIPDGAVLENKDINGPEDL 469
9630.m00161|protein Similar to UDP-glucose pyrophosphorylase
Length = 389
Score = 622 bits (1586), Expect = e-178
Identities = 328/466 (70%), Positives = 354/466 (75%)
Frame = +3
Query: 135 ADSKIDGLRDAVAKLGEISENEKAGFISLVSRYLSGEAEQIEWSKIQTPTDEVVVPYDTL 314
AD K+ LR+AVA L +IS+NEK+GFISLV+RYLSGE E +EW+KI TPTDEVVVPYDTL
Sbjct: 2 ADEKLAKLREAVAGLSQISDNEKSGFISLVARYLSGEEEHVEWAKIHTPTDEVVVPYDTL 61
Query: 315 APPPEDLDAMKALLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIESLNK 494
A PPEDL+ K LL+KL VLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIES
Sbjct: 62 AAPPEDLEETKKLLNKLAVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIES--- 118
Query: 495 KYGCSVPLLLMNSFNTHDDTQKIVEKYSNSNIEIHTFNQSQYPRIVTEDFLPLPSKGQTG 674
QYPR+V ++FLP PSKG+T
Sbjct: 119 ----------------------------------------QYPRVVADEFLPWPSKGKTC 138
Query: 675 KDGWYPPGHGDVFPSLNNSGKLDTLLSQGKEYVFVANSDNLGAIVDIKILNHLIHNQNEY 854
KDGWYPPGHGD+FPSL NSGKLD LLSQ
Sbjct: 139 KDGWYPPGHGDIFPSLMNSGKLDLLLSQ-------------------------------- 166
Query: 855 CMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEHVDEFKSIEKFKIFNTNNLWVNLKA 1034
VTPKTLADVKGGTLISYE +VQLLEIAQVPD HV+EFKSIEKFKIFNTNNLWVNLKA
Sbjct: 167 ---VTPKTLADVKGGTLISYEDKVQLLEIAQVPDAHVNEFKSIEKFKIFNTNNLWVNLKA 223
Query: 1035 IKRLVDAEALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFEKAIGINVPRSRFLPVKATS 1214
IKRLV+A+ALKMEIIPNPKEVDGVKVLQLETAAGAAIRFF+ AIGINVPRSRFLPVKATS
Sbjct: 224 IKRLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDHAIGINVPRSRFLPVKATS 283
Query: 1215 DLLLVQSDLYTLVDGYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLK 1394
DL LVQSDLYTLVDG+V RNPAR PSNPSIELGPEFKKV FL RFKSIPSIVELD+LK
Sbjct: 284 DLQLVQSDLYTLVDGFVTRNPARTNPSNPSIELGPEFKKVGCFLGRFKSIPSIVELDTLK 343
Query: 1395 VSGDVSFGSGVVLKGNVTIAAKAGVKLEIPDGAVLENKDINGPEDI 1532
VSGDV FGS + LKG VTI A+ GVKLEIPDGAV+ENKDINGPED+
Sbjct: 344 VSGDVWFGSSITLKGKVTITAQPGVKLEIPDGAVIENKDINGPEDL 389
9629.m01582|protein Similar to utp--glucose-1-phosphate
uridylyltransferase (ec 2.7.7.9) (udp-glucose
pyrophosphorylase) (udpgp) (ugpase). [banana
Length = 753
Score = 469 bits (1193), Expect = e-131
Identities = 270/464 (58%), Positives = 317/464 (68%), Gaps = 10/464 (2%)
Frame = +3
Query: 117 AAAAVAADSKIDGLRDAVA-KLGEISENEKAGFISLVSRYL-SGEAEQIEWSKIQTPTDE 290
AA+ S L + VA KL S+ +K F+ LVSRYL E E I+W+K++ PT E
Sbjct: 147 AASGATVPSVAATLSEMVARKLSVDSDEDKDSFMHLVSRYLIREEKEMIDWNKVERPTPE 206
Query: 291 VVVPYDTLAPPPEDLDAMKALLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIV 470
+VVPYD+L P D+ ++ LL+KL VLKLNGGLGTTM C PK IEVR+G TFLDL +
Sbjct: 207 MVVPYDSLVQAPRDIPEIRNLLNKLAVLKLNGGLGTTMECVAPKCTIEVRSGLTFLDLAI 266
Query: 471 IQIESLNKKYGCSVPLLLMNSFNTHDDTQKIVEKYSNSNIEIHTFNQSQYPRIVTEDFLP 650
+Q E IVEKY+N IEIHTFNQ++YPRI+TE FLP
Sbjct: 267 MQTE--------------------------IVEKYTN--IEIHTFNQNKYPRIITEKFLP 298
Query: 651 LPSKGQTGKDGWYPPGHGDVFPSLNNSGKLDTLLSQGKEYVFVANSDNLGAIVDIKI--- 821
L S+G TG WYPPGHGDVF SL SG LDT+LSQGKEYVF+A+S+NLGA VDI+I
Sbjct: 299 LSSEGSTGSHCWYPPGHGDVFFSLCKSGILDTMLSQGKEYVFIASSENLGATVDIEIESL 358
Query: 822 -----LNHLIHNQNEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEHVDEFKSIE 986
LNHLIHN+NEYCME LLEI QVP E+V
Sbjct: 359 TSTEILNHLIHNKNEYCME----------------------LLEIFQVPYENV------- 389
Query: 987 KFKIFNTNNLWVNLKAIKRLVDAEALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFEKAI 1166
F VNLKAIKRLV AEALKMEIIPN KEVDGVKVLQLE AG+AI+ FEKAI
Sbjct: 390 ---AFGYRR--VNLKAIKRLVKAEALKMEIIPNLKEVDGVKVLQLEKEAGSAIQCFEKAI 444
Query: 1167 GINVPRSRFLPVKATSDLLLVQSDLYTLVDGYVIRNPARVKPSNPSIELGPEFKKVANFL 1346
G+ VPRSRFL VK TSDL L+ SDLY ++DG V RNPAR +NP I+LGPEF+KV +FL
Sbjct: 445 GVTVPRSRFLAVKNTSDLFLILSDLYIVMDGTVTRNPARDNSTNPLIDLGPEFRKVDSFL 504
Query: 1347 ARFKSIPSIVELDSLKVSGDVSFGSGVVLKGNVTIAAKAGVKLEIPDGAVLENK 1508
RFKSIPSIV LDSLK+SGDV FGS + LKG VTIAA+ G+KL+I DG+V +NK
Sbjct: 505 DRFKSIPSIVALDSLKISGDVWFGSRITLKGEVTIAAQLGLKLDILDGSVFDNK 558
9630.m02873|protein ribosomal protein L29, putative
Length = 123
Score = 104 bits (258), Expect = 5e-22
Identities = 51/53 (96%), Positives = 51/53 (96%)
Frame = -1
Query: 2226 EAYKNKKLLPLDLRPKKTRAIRRRLTKHQLSLKTEREKKREKYFPMRKYAIKA 2068
EAYK K LLPLDLRPKKTRAIRRRLTKHQLSLKTEREKKREKYFPMRKYAIKA
Sbjct: 71 EAYKKKSLLPLDLRPKKTRAIRRRLTKHQLSLKTEREKKREKYFPMRKYAIKA 123
9632.m02915|protein ribosomal protein L29, putative
Length = 123
Score = 104 bits (257), Expect = 6e-22
Identities = 50/53 (94%), Positives = 51/53 (95%)
Frame = -1
Query: 2226 EAYKNKKLLPLDLRPKKTRAIRRRLTKHQLSLKTEREKKREKYFPMRKYAIKA 2068
EAYK K LLPLDLRPKKTRAIRRRLTKHQLSLKTEREKKREKYFPMRKYA+KA
Sbjct: 71 EAYKKKSLLPLDLRPKKTRAIRRRLTKHQLSLKTEREKKREKYFPMRKYAVKA 123
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 145185580
Number of Sequences: 59712
Number of extensions: 4506031
Number of successful extensions: 89100
Number of sequences better than 1.0e-10: 12
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 88964
Number of HSP's gapped (non-prelim): 27
length of query: 742
length of database: 26,991,925
effective HSP length: 53
effective length of query: 688
effective length of database: 23,827,189
effective search space: 16393106032
effective search space used: 16393106032
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 162 (67.5 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG181 Members:15 3pri:Y 3e-88
AAB65432.1 ADP-ribosylation factor 1 [Oryza sativa]
dbj|BAC06914.1| ADP-ribosylation factor 1 [Oryza sativa (japonica cul
(1031 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9635.m01193|protein ADP-ribosylation factor family, putative 369 e-102
9635.m01196|protein ADP-ribosylation factor family 366 e-101
9633.m03842|protein ADP-ribosylation factor [imported] - ... 362 e-100
9631.m05882|protein ADP-ribosylation factor 361 e-100
9631.m05881|protein ADP-ribosylation factor 361 e-100
9629.m01594|protein ADP-ribosylation factor family 359 4e-99
9629.m05876|protein ADP-ribosylation factor family 356 3e-98
9636.m01507|protein ADP-ribosylation factor 3 - Arabidops... 242 1e-63
9638.m03942|protein putative ADP-ribosylation factor 240 4e-63
9630.m04581|protein ADP-ribosylation factor family 238 1e-62
9630.m00263|protein ADP-ribosylation factor family 231 2e-60
9634.m00141|protein ADP-ribosylation factor family 209 8e-54
9638.m03941|protein putative ADP-ribosylation factor 186 5e-47
9630.m02130|protein probable adp-ribosylation factor at2g... 171 2e-42
9638.m03940|protein putative ADP-ribosylation factor 164 3e-40
9639.m03408|protein Similar to AY086337 ADP-ribosylation ... 138 1e-32
9631.m02711|protein putative GTP-binding protein 129 6e-30
9635.m04291|protein ADP-ribosylation factor family, putative 120 3e-27
9631.m00948|protein AY114718 ADP-ribosylation factor-like... 111 3e-24
9630.m04896|protein ADP-ribosylation factor-like protein 109 8e-24
9635.m01193|protein ADP-ribosylation factor family, putative
Length = 304
Score = 369 bits (938), Expect = e-102
Identities = 196/254 (77%), Positives = 204/254 (80%), Gaps = 4/254 (1%)
Frame = +1
Query: 46 QGGSPLPHPISSPAGR----HDYYLPVCSRCHRGIGHRFSAEITDPKIGSDIRIAWFSAA 213
QG PLP GR DY +P+ G+R E+
Sbjct: 64 QGAGPLPLKGREAHGRCHRRRDYVMPLPLEGREAHGYRRRREVGREHA------------ 111
Query: 214 LDLRPVSVG*SEECKGEMGLAFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIV 393
L P +E G+MGLAFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIV
Sbjct: 112 -KLMPSE----KEEGGKMGLAFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIV 166
Query: 394 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEA 573
TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEA
Sbjct: 167 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEA 226
Query: 574 RDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSG 753
RDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT+G
Sbjct: 227 RDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTG 286
Query: 754 EGLYEGLDWLSNNIASKA 807
EGLYEGLDWLS+NIASKA
Sbjct: 287 EGLYEGLDWLSSNIASKA 304
9635.m01196|protein ADP-ribosylation factor family
Length = 181
Score = 366 bits (930), Expect = e-101
Identities = 179/181 (98%), Positives = 181/181 (99%)
Frame = +1
Query: 265 MGLAFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 444
MGLAFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1 MGLAFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 445 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 624
ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 625 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 804
LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT+GEGLYEGLDWLS+NIASK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIASK 180
Query: 805 A 807
A
Sbjct: 181 A 181
9633.m03842|protein ADP-ribosylation factor [imported] - rice
Length = 181
Score = 362 bits (919), Expect = e-100
Identities = 177/181 (97%), Positives = 179/181 (98%)
Frame = +1
Query: 265 MGLAFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 444
MGL F KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 445 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 624
ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAV
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAV 120
Query: 625 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 804
LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 180
Query: 805 A 807
A
Sbjct: 181 A 181
9631.m05882|protein ADP-ribosylation factor
Length = 181
Score = 361 bits (918), Expect = e-100
Identities = 177/181 (97%), Positives = 179/181 (98%)
Frame = +1
Query: 265 MGLAFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 444
MGL F KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 445 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 624
ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 625 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 804
LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT+GEGLYEGLDWLS+NIASK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIASK 180
Query: 805 A 807
A
Sbjct: 181 A 181
9631.m05881|protein ADP-ribosylation factor
Length = 181
Score = 361 bits (918), Expect = e-100
Identities = 177/181 (97%), Positives = 179/181 (98%)
Frame = +1
Query: 265 MGLAFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 444
MGL F KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 445 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 624
ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 625 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 804
LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT+GEGLYEGLDWLS+NIASK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIASK 180
Query: 805 A 807
A
Sbjct: 181 A 181
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63781097
Number of Sequences: 59712
Number of extensions: 1657505
Number of successful extensions: 6972
Number of sequences better than 1.0e-10: 43
Number of HSP's better than 0.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6940
Number of HSP's gapped (non-prelim): 25
length of query: 343
length of database: 26,991,925
effective HSP length: 51
effective length of query: 292
effective length of database: 23,946,613
effective search space: 6992410996
effective search space used: 6992410996
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG189 Members:317 3pri:Y 1e-121
B44956 chlorophyll a/b-binding protein II precursor - rice
prf||1707316B chlorophyll a/b binding protein 2
(1087 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m03807|protein chlorophyll a/b binding protein 524 e-149
9629.m05067|protein Chlorophyll A-B binding protein, puta... 409 e-114
9629.m03990|protein Chlorophyll A-B binding protein, puta... 409 e-114
9637.m01516|protein chlorophyll a/b-binding protein I pre... 408 e-113
9635.m03724|protein chlorophyll a-b binding protein of lh... 363 e-100
9639.m01284|protein chlorophyll a/b-binding protein CP26 ... 212 7e-55
9637.m00977|protein Chlorophyll A-B binding protein, puta... 208 1e-53
9635.m03882|protein LHCI-680, photosystem I antenna prote... 145 1e-34
9634.m02114|protein chlorophyll a/b-binding protein precu... 131 2e-30
9637.m02343|protein AY086461 PSI type II chlorophyll a/b-... 129 1e-29
9630.m05194|protein light-harvesting complex protein [imp... 127 3e-29
9630.m00958|protein chlorophyll a/b-binding protein type ... 126 6e-29
9639.m01283|protein chlorophyll a/b-binding protein CP26 ... 115 1e-25
9635.m03689|protein probable chlorophyll a/b-binding prot... 114 3e-25
9636.m03389|protein chlorophyll a/b-binding protein presu... 113 4e-25
9632.m03624|protein chlorophyll a/b-binding apoprotein CP... 92 2e-18
9630.m00957|protein chlorophyll a/b-binding protein type ... 78 2e-14
9631.m03807|protein chlorophyll a/b binding protein
Length = 263
Score = 524 bits (1336), Expect = e-149
Identities = 247/262 (94%), Positives = 255/262 (97%)
Frame = +3
Query: 69 MAASALHQTTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFS 248
MAASALHQTTSFLGTAPRRD+LVR VGD GGRITMRRTVKSAPQSIWYGPDRPKYLGPFS
Sbjct: 1 MAASALHQTTSFLGTAPRRDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFS 60
Query: 249 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 428
EQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEILSKNG
Sbjct: 61 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNG 120
Query: 429 IKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFIEGYRVGGGPLG 608
+KFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA QVVLMGF+EGYRVGGGPLG
Sbjct: 121 VKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLG 180
Query: 609 EGLDIIYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENL 788
EGLD +YPGGAFDPLGLADDPDT AELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL
Sbjct: 181 EGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 240
Query: 789 FDHIADPVNNNAWAFATNFAPG 854
FDH+ADPV NNAWA+ATNF PG
Sbjct: 241 FDHVADPVANNAWAYATNFVPG 262
9629.m05067|protein Chlorophyll A-B binding protein, putative
Length = 265
Score = 409 bits (1041), Expect = e-114
Identities = 201/262 (76%), Positives = 224/262 (84%), Gaps = 8/262 (3%)
Frame = +3
Query: 69 MAAS--ALHQTTSFLGTAPRRDDLVRSVGDFG-GRITMRRTVK-----SAPQSIWYGPDR 224
MAAS AL + G A V + FG GR+TMR++ +A S WYG DR
Sbjct: 1 MAASTMALSSPAALAGKA------VANAKVFGEGRVTMRKSAAKPKPAAASGSPWYGADR 54
Query: 225 PKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 404
YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVF
Sbjct: 55 VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF 114
Query: 405 PEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFIEGY 584
PE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIW CQVVLMG +EGY
Sbjct: 115 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWGCQVVLMGAVEGY 174
Query: 585 RVGGGPLGEGLDIIYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGFFVQAIVT 764
RV GGPLGE +D +YPGG+FDPLGLADDP+ AELKVKE+KNGRLAMFSMFGFFVQAIVT
Sbjct: 175 RVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 234
Query: 765 GKGPVENLFDHIADPVNNNAWAFATNFAPG 854
GKGP+ENL DH+ADPVNNNAWA+ATNF PG
Sbjct: 235 GKGPLENLADHLADPVNNNAWAYATNFVPG 264
9629.m03990|protein Chlorophyll A-B binding protein, putative
Length = 261
Score = 409 bits (1040), Expect = e-114
Identities = 191/232 (82%), Positives = 212/232 (91%), Gaps = 4/232 (1%)
Frame = +3
Query: 159 GRITMRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 326
GRITMR++ +A S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 25 GRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 84
Query: 327 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGN 506
ETFAKNRELEVIHSRWAMLGALGCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGN
Sbjct: 85 ETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 144
Query: 507 PNLVHAQSILAIWACQVVLMGFIEGYRVGGGPLGEGLDIIYPGGAFDPLGLADDPDTAAE 686
P+L+HAQSILAIWA QVVLMG +EGYR+ GGPLGE +D +YPGG+FDPLGLADDP+ AE
Sbjct: 145 PSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAE 204
Query: 687 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVNNNAWAFATNFAPG 854
LKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVNNNAWA+ATNF PG
Sbjct: 205 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 260
9637.m01516|protein chlorophyll a/b-binding protein I precursor -
rice
Length = 265
Score = 408 bits (1037), Expect = e-113
Identities = 191/231 (82%), Positives = 211/231 (90%), Gaps = 5/231 (2%)
Frame = +3
Query: 162 RITMRRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 326
RITMR+T ++ S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 29 RITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 88
Query: 327 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGN 506
ETFAKNRELEVIHSRWAMLGALGCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGN
Sbjct: 89 ETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148
Query: 507 PNLVHAQSILAIWACQVVLMGFIEGYRVGGGPLGEGLDIIYPGGAFDPLGLADDPDTAAE 686
P+L+HAQSILAIWA QVVLMG +EGYR+ GGPLGE +D +YPGGAFDPLGLADDP+ AE
Sbjct: 149 PSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAE 208
Query: 687 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVNNNAWAFATNFAPG 854
LKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVNNNAWA+ATNF PG
Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 264
9635.m03724|protein chlorophyll a-b binding protein of lhcii type
iii, chloroplastprecursor (cab)
Length = 266
Score = 363 bits (922), Expect = e-100
Identities = 189/273 (69%), Positives = 211/273 (77%), Gaps = 4/273 (1%)
Frame = +3
Query: 39 SSQAAPATSEMAASALHQTTSFLGTAPRRDDLVRSVGDFG-GRITMRRTVKSAPQSIWYG 215
S+ AP + +AA T FLG + VR + GRITM + +WYG
Sbjct: 3 STIMAPTSRVLAAK-----TPFLGHPRPSNAPVRDIAAAATGRITMSK-------ELWYG 50
Query: 216 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 395
PDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALG
Sbjct: 51 PDRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALG 110
Query: 396 CVFPEILSK-NGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGF 572
C+ PE+L K + F E VWFKAGAQIFS+GGLDYLGNPNLVHAQSILA+ QVVLMG
Sbjct: 111 CITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGL 170
Query: 573 IEGYRVGGGP-LGEGLDIIYPGGA-FDPLGLADDPDTAAELKVKELKNGRLAMFSMFGFF 746
+EGYR+ G P +G+G D +YPGG FDPLGLADDP T AELKVKE+KNGRLAMFSMFGFF
Sbjct: 171 VEGYRINGLPGVGDGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFF 229
Query: 747 VQAIVTGKGPVENLFDHIADPVNNNAWAFATNFAPGS 857
VQAIVTGKGP+ENL DH+ADPV NNAW +AT F PGS
Sbjct: 230 VQAIVTGKGPLENLLDHLADPVANNAWVYATKFTPGS 266
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80160082
Number of Sequences: 59712
Number of extensions: 2640935
Number of successful extensions: 24911
Number of sequences better than 1.0e-10: 34
Number of HSP's better than 0.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 24853
Number of HSP's gapped (non-prelim): 27
length of query: 362
length of database: 26,991,925
effective HSP length: 51
effective length of query: 310
effective length of database: 23,946,613
effective search space: 7423450030
effective search space used: 7423450030
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG278 Members:196 3pri:Y 1e-119
AAK49116.1 alcohol dehydrogenase [Hordeum vulgare subsp.
vulgare]
(1702 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9639.m00990|protein alcohol dehydrogenase 1 754 0.0
9639.m00993|protein alcohol dehydrogenase 2 697 0.0
9639.m00989|protein alcohol dehydrogenase 1 553 e-157
9639.m00994|protein alcohol dehydrogenase 515 e-145
9630.m05667|protein alcohol dehydrogenase class iii (ec 1... 490 e-138
9630.m05668|protein alcohol dehydrogenase class iii (ec 1... 460 e-129
9630.m04071|protein AT5g24760/T4C12_30 425 e-118
9630.m04072|protein AT5g24760/T4C12_30 419 e-117
9631.m00850|protein alcohol dehydrogenase ADH 325 2e-88
9638.m00639|protein oxidoreductase, zinc-binding dehydrog... 300 5e-81
9631.m00847|protein Similar to probable alcohol dehydroge... 289 9e-78
9638.m00640|protein oxidoreductase, zinc-binding dehydrog... 231 4e-60
9635.m04301|protein oxidoreductase, zinc-binding dehydrog... 178 2e-44
9636.m00075|protein alcohol dehydrogenase-like protein 152 2e-36
9638.m00638|protein expressed protein 130 9e-30
9632.m01422|protein oxidoreductase, zinc-binding dehydrog... 91 5e-18
9631.m00849|protein expressed protein 87 9e-17
9637.m02016|protein sinapyl alcohol dehydrogenase 82 2e-15
9638.m01063|protein putative cinnamyl-alcohol dehydrogenase 82 2e-15
9638.m02516|protein oxidoreductase, zinc-binding dehydrog... 80 1e-14
9639.m00990|protein alcohol dehydrogenase 1
Length = 379
Score = 754 bits (1925), Expect = 0.0
Identities = 360/379 (94%), Positives = 371/379 (96%)
Frame = +2
Query: 92 MATAGKVIKCKAAVAWEAGKPLTMEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQT 271
MATAGKVIKCKAAVAWEA KPL +EEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQT
Sbjct: 1 MATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQT 60
Query: 272 PMFPRIFGHEAGGIVESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINT 451
P+FPRIFGHEAGGIVESVGEGVTD+APGDHVLPVFTGECKEC HCKSAESNMCDLLRINT
Sbjct: 61 PVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINT 120
Query: 452 DRGVMIGDGKSRFSIGGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGIS 631
DRGVMIGDGKSRFSI GKPIYHFVGTSTFSEYTVMHVGCVAKINP APLDKVCVLSCGIS
Sbjct: 121 DRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGIS 180
Query: 632 TGLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEEARKFGC 811
TGLGA+INVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIG+DLNA+RFEEARKFGC
Sbjct: 181 TGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGC 240
Query: 812 TEFVNPKDHTKPVQQVLADMTNGGVDRSVECTGNVNAMIQAFECVHDGWGVAVLVGVPHK 991
TEFVNPKDH KPVQQVLA+MTNGGVDRSVECTGN+NAMIQAFECVHDGWGVAVLVGVPHK
Sbjct: 241 TEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHK 300
Query: 992 DAEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVEMYMKKELEVEKFITHSVPFSEINK 1171
DAEFKTHPMNFLNERTLKGTFFGN+KPRTDLPNVVE+YMKKELEVEKFITHSVPFSEIN
Sbjct: 301 DAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINT 360
Query: 1172 AFDLMAKGEGIRCIIRMDN 1228
AFDLM KGEGIRCIIRM+N
Sbjct: 361 AFDLMHKGEGIRCIIRMEN 379
9639.m00993|protein alcohol dehydrogenase 2
Length = 379
Score = 697 bits (1780), Expect = 0.0
Identities = 323/378 (85%), Positives = 357/378 (93%)
Frame = +2
Query: 92 MATAGKVIKCKAAVAWEAGKPLTMEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQT 271
MATAGKVIKCKAAVAWEAGKPL++EEVEVAPPQAMEVRVKIL+T+LCHTDVYFWEAKGQT
Sbjct: 1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQT 60
Query: 272 PMFPRIFGHEAGGIVESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINT 451
P+FPRI GHEAGGIVESVGEGVT++APGDHVLPVFTGECKEC HCKS ESNMCDLLRIN
Sbjct: 61 PVFPRILGHEAGGIVESVGEGVTELAPGDHVLPVFTGECKECDHCKSEESNMCDLLRINV 120
Query: 452 DRGVMIGDGKSRFSIGGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGIS 631
DRGVMIGDGKSRF+I GKPI+HFVGTSTFSEYTV+HVGC+AKINPEAPLDKVC+LSCG S
Sbjct: 121 DRGVMIGDGKSRFTIKGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGFS 180
Query: 632 TGLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEEARKFGC 811
TG GA++NVAKP KG TVAIFGLGAVGLAA EGAR++GASRIIGVDLN ++FE+A+KFGC
Sbjct: 181 TGFGATVNVAKPKKGQTVAIFGLGAVGLAAMEGARLSGASRIIGVDLNPAKFEQAKKFGC 240
Query: 812 TEFVNPKDHTKPVQQVLADMTNGGVDRSVECTGNVNAMIQAFECVHDGWGVAVLVGVPHK 991
T+FVNPKDH+KPV +VL +MTNGG+DR+VECTGN+NAMI FECVHDGWGVAVLVGVP K
Sbjct: 241 TDFVNPKDHSKPVHEVLIEMTNGGLDRAVECTGNINAMISCFECVHDGWGVAVLVGVPTK 300
Query: 992 DAEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVEMYMKKELEVEKFITHSVPFSEINK 1171
D FKTHPMNFLNE+TLKGTFFGN+KPRTDLPNVVE+YMKKELE+EKFITHSVPFSEIN
Sbjct: 301 DDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINT 360
Query: 1172 AFDLMAKGEGIRCIIRMD 1225
AFDLM KGE +RC++RMD
Sbjct: 361 AFDLMLKGESLRCVMRMD 378
9639.m00989|protein alcohol dehydrogenase 1
Length = 290
Score = 553 bits (1410), Expect(2) = e-157
Identities = 264/280 (94%), Positives = 273/280 (97%)
Frame = +2
Query: 389 KECPHCKSAESNMCDLLRINTDRGVMIGDGKSRFSIGGKPIYHFVGTSTFSEYTVMHVGC 568
+ C HCKSAESNMCDLLRINTDRGVMIGDGKSRFSI GKPIYHFVGTSTFSEYTVMHVGC
Sbjct: 11 ERCAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGC 70
Query: 569 VAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGA 748
VAKINP APLDKVCVLSCGISTGLGA+INVAKPPKGSTVAIFGLGAVGLAAAEGARIAGA
Sbjct: 71 VAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGA 130
Query: 749 SRIIGVDLNASRFEEARKFGCTEFVNPKDHTKPVQQVLADMTNGGVDRSVECTGNVNAMI 928
SRIIG+DLNA+RFEEARKFGCTEFVNPKDH KPVQQVLA+MTNGGVDRSVECTGN+NAMI
Sbjct: 131 SRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMI 190
Query: 929 QAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVEMYM 1108
QAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGN+KPRTDLPNVVE+YM
Sbjct: 191 QAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYM 250
Query: 1109 KKELEVEKFITHSVPFSEINKAFDLMAKGEGIRCIIRMDN 1228
KKELEVEKFITHSVPFSEIN AFDLM KGEGIRCIIRM+N
Sbjct: 251 KKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRMEN 290
Score = 23.5 bits (49), Expect(2) = e-157
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3
Query: 297 MKLEA*WRVLER 332
MKLE WRVLER
Sbjct: 1 MKLEVLWRVLER 12
9639.m00994|protein alcohol dehydrogenase
Length = 303
Score = 515 bits (1311), Expect = e-145
Identities = 241/287 (83%), Positives = 270/287 (93%), Gaps = 1/287 (0%)
Frame = +2
Query: 92 MATAGKVIKCKAAVAWEAGKPLTMEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQT 271
MATAGKVIKCKAAVAWEAGKPL++EEVEVAPPQAMEVR+KIL+T+LCHTDVYFWEAKGQT
Sbjct: 1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRLKILYTALCHTDVYFWEAKGQT 60
Query: 272 PMFPRIFGHEAGGIVESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINT 451
P+FPRIFGHEAGGIVESVGEGVT+++PGDHVLPVFTGEC +C HC S ESN+CDLLRINT
Sbjct: 61 PVFPRIFGHEAGGIVESVGEGVTELSPGDHVLPVFTGECGDCRHCLSEESNLCDLLRINT 120
Query: 452 DRGVMIGDGKSRFSI-GGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGI 628
DRG MIGDG++RF+ GG+P+YHF+GTSTFSEYTV+HVGCVAKI+P APLDKVCVLSCGI
Sbjct: 121 DRGAMIGDGQTRFTARGGQPVYHFLGTSTFSEYTVVHVGCVAKIHPAAPLDKVCVLSCGI 180
Query: 629 STGLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEEARKFG 808
STG GA++NVAKPPKG TVAIFGLGAVGLAA EGARI+GASRIIGVDLN ++FE A+KFG
Sbjct: 181 STGFGATVNVAKPPKGCTVAIFGLGAVGLAAMEGARISGASRIIGVDLNPAKFELAKKFG 240
Query: 809 CTEFVNPKDHTKPVQQVLADMTNGGVDRSVECTGNVNAMIQAFECVHD 952
CT+FVNPKD+ KPVQQV+ +MTNGGVDRSVECTGN AMI AFECVHD
Sbjct: 241 CTDFVNPKDYDKPVQQVIIEMTNGGVDRSVECTGNAAAMISAFECVHD 288
9630.m05667|protein alcohol dehydrogenase class iii (ec 1.1.1.1)
(glutathione-dependentformaldehyde dehydrogenase) (ec
1.2.1.1) (fdh) (faldh) (gsh-fdh)
Length = 381
Score = 490 bits (1249), Expect = e-138
Identities = 229/377 (60%), Positives = 287/377 (75%)
Frame = +2
Query: 95 ATAGKVIKCKAAVAWEAGKPLTMEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTP 274
+T G+VI CKAAVAWEA +P+T+E+V+VAPPQA EVRVKILFT+LCHTD Y W K
Sbjct: 4 STQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEG 63
Query: 275 MFPRIFGHEAGGIVESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINTD 454
+FP I GHEA GIVESVGEGVT+V PGDHV+P + EC+EC CKS ++N+C +R T
Sbjct: 64 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATG 123
Query: 455 RGVMIGDGKSRFSIGGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGIST 634
GVM+ D KSRFSI GKPIYHF+GTSTFS+YTV+H VAKINP+APLDKVC+L CG+ST
Sbjct: 124 VGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVST 183
Query: 635 GLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEEARKFGCT 814
GLGA N AK GS VAIFGLG VGLA AEGA+ AGASRIIG+D+++ +F+ A+ FG T
Sbjct: 184 GLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVT 243
Query: 815 EFVNPKDHTKPVQQVLADMTNGGVDRSVECTGNVNAMIQAFECVHDGWGVAVLVGVPHKD 994
EFVNPKDH KP+QQV+ D+T+GGVD S EC GNV+ M A EC H GWG +V+VGV
Sbjct: 244 EFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASG 303
Query: 995 AEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVEMYMKKELEVEKFITHSVPFSEINKA 1174
E T P + R KGT FG FK R+ +P +VE Y+ KE++V++++THS+ ++INKA
Sbjct: 304 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKA 363
Query: 1175 FDLMAKGEGIRCIIRMD 1225
FDL+ +G +RC++ D
Sbjct: 364 FDLLHEGGCLRCVLATD 380
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110412477
Number of Sequences: 59712
Number of extensions: 3431199
Number of successful extensions: 55872
Number of sequences better than 1.0e-10: 49
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 55821
Number of HSP's gapped (non-prelim): 35
length of query: 567
length of database: 26,991,925
effective HSP length: 52
effective length of query: 514
effective length of database: 23,886,901
effective search space: 12277867114
effective search space used: 12277867114
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG312 Members:49 3pri:Y 1e-106
CAB64600.1 S-adenosylmethionine decarboxylase 2 [Oryza sativa
(japonica cultivar-group)]
(1956 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9630.m03832|protein Adenosylmethionine decarboxylase 642 0.0
9632.m04015|protein Adenosylmethionine decarboxylase 584 e-166
9632.m04014|protein Adenosylmethionine decarboxylase 584 e-166
9637.m02218|protein Adenosylmethionine decarboxylase 506 e-143
9637.m02217|protein Adenosylmethionine decarboxylase 506 e-143
9633.m00430|protein Similar to S-adenosylmethionine decar... 232 1e-60
9637.m02110|protein hypothetical protein 71 7e-12
9630.m03832|protein Adenosylmethionine decarboxylase
Length = 395
Score = 642 bits (1638), Expect = 0.0
Identities = 320/391 (81%), Positives = 344/391 (87%)
Frame = +3
Query: 501 SEAMAVSAIGFEGYEKRLEITFSEASVFTDPNGRGLRALSRPQIDSVLDLAKCTIVSGLS 680
+++ VSAIGFEGYEKRLEITFSEA VF DPNGRGLRALSR QIDSVLDLA+CTIVS LS
Sbjct: 7 ADSPPVSAIGFEGYEKRLEITFSEAPVFADPNGRGLRALSRAQIDSVLDLARCTIVSELS 66
Query: 681 NEKFDSYVLSESSLFVYPYTVVIKTCGTTKLLLAIPRILELAEELALPLAAVKYSRGAFI 860
NE FDSYVLSESSLFVYPY +VIKTCGTTKLLLAIPRILELAEEL+LPL AVKYSRG FI
Sbjct: 67 NEVFDSYVLSESSLFVYPYKIVIKTCGTTKLLLAIPRILELAEELSLPLEAVKYSRGTFI 126
Query: 861 FPEAQPSPHKNFSDEVAFLNGYFGGLKSGGNAYVIGDPAKPGQKWHVYYATQQPEQPVVN 1040
FPEAQPSPHKNFS+EVA LN YFGGLKSGGNAYVIGDPAKPGQKWHVYYATQ PEQPVV
Sbjct: 127 FPEAQPSPHKNFSEEVAVLNRYFGGLKSGGNAYVIGDPAKPGQKWHVYYATQHPEQPVVT 186
Query: 1041 LEMCMTGLDKKKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNA 1220
LEMCMTGLDKKKASVFFKTSADGHT+ AKEMTKLSGISDIIPEME+CDFDFEPCGYSMNA
Sbjct: 187 LEMCMTGLDKKKASVFFKTSADGHTTYAKEMTKLSGISDIIPEMEVCDFDFEPCGYSMNA 246
Query: 1221 IHGSAFSTIHVTPEDGFSYGSYEVMGLDPASMAYGDLVKRVLRSFGPSEFSVAVTIFGCP 1400
IHG AFSTIHVTPEDGFSY SYEVMG +PAS+AYGDLVKRVLR FGP EFSVAVTIFG
Sbjct: 247 IHGPAFSTIHVTPEDGFSYASYEVMGFNPASLAYGDLVKRVLRCFGPLEFSVAVTIFGGR 306
Query: 1401 SLAGTWGERLNVGVYDSTNMVVQELPGGGSLIYQSFTAAGEDSSGSPRSVLNCYVDGNLQ 1580
+ AGTW + L+VG Y +NMV QELP GG LIYQSFTA E ++GSPRSVL+C+ D N +
Sbjct: 307 NHAGTWAKGLDVGAYSCSNMVEQELPSGGLLIYQSFTATAEIATGSPRSVLHCFADENTE 366
Query: 1581 SASKVDAFLCWEDDAAQEKDERRGDGKKMRS 1673
A K++A L WEDDA +E D +GKKMRS
Sbjct: 367 KAGKMEA-LYWEDDAVEEIDGT--EGKKMRS 394
9632.m04015|protein Adenosylmethionine decarboxylase
Length = 398
Score = 584 bits (1490), Expect = e-166
Identities = 294/375 (78%), Positives = 323/375 (85%), Gaps = 8/375 (2%)
Frame = +3
Query: 516 VSAIGFEGYEKRLEITFSEASVFTDPNGRGLRALSRPQIDSVLDLAKCTIVSGLSNEKFD 695
VSAIGFEGYEKRLEITFSEA VF DP+GRGLRALSR QIDSVLDLA+CTIVS LSN+ FD
Sbjct: 12 VSAIGFEGYEKRLEITFSEAPVFADPDGRGLRALSRAQIDSVLDLARCTIVSELSNKDFD 71
Query: 696 SYVLSESSLFVYPYTVVIKTCGTTKLLLAIPRILELAEELALPLAAVKYSRGAFIFPEAQ 875
SYVLSESSLF+Y +VIKTCGTTKLLL IPRILELAE L++PLAAVKYSRG FIFP AQ
Sbjct: 72 SYVLSESSLFIYSDKIVIKTCGTTKLLLTIPRILELAEGLSMPLAAVKYSRGMFIFPSAQ 131
Query: 876 PSPHKNFSDEVAFLNGYFGGLKSGGNAYVIGDPAKPGQKWHVYYATQQPEQPVVNLEMCM 1055
P+PH++FS+EVA LN YFG LKSGGNAYVIGDPAKPGQKWH+YYATQ PEQP+V LEMCM
Sbjct: 132 PAPHRSFSEEVAVLNRYFGHLKSGGNAYVIGDPAKPGQKWHIYYATQHPEQPMVTLEMCM 191
Query: 1056 TGLDKKKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSA 1235
TGLDK+KASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSA
Sbjct: 192 TGLDKEKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSA 251
Query: 1236 FSTIHVTPEDGFSYGSYEVMGLDPASMAYGDLVKRVLRSFGPSEFSVAVTIFGCPSLAGT 1415
FSTIHVTPEDGFSY SYEV+G D +++AYGDLVKRVLR FGPSEFSVAVTIFG AGT
Sbjct: 252 FSTIHVTPEDGFSYASYEVVGFDASTLAYGDLVKRVLRCFGPSEFSVAVTIFGGHGHAGT 311
Query: 1416 WGERLNVGVYDSTNMVVQELPGGGSLIYQSFTAAGED---SSGSPRSVLNCYVDGNLQSA 1586
W + LN Y NMV QELP GG LIYQSF A ED + GSP+SVL+C+ N+ +
Sbjct: 312 WAKELNADAYKCNNMVEQELPCGGLLIYQSFDAT-EDVPVAVGSPKSVLHCFEAENMVNP 370
Query: 1587 S-----KVDAFLCWEDDAAQEKD 1640
+ K+ L W +DA +E D
Sbjct: 371 APVKEGKLGNLLPWGEDALEEND 393
9632.m04014|protein Adenosylmethionine decarboxylase
Length = 398
Score = 584 bits (1490), Expect = e-166
Identities = 294/375 (78%), Positives = 323/375 (85%), Gaps = 8/375 (2%)
Frame = +3
Query: 516 VSAIGFEGYEKRLEITFSEASVFTDPNGRGLRALSRPQIDSVLDLAKCTIVSGLSNEKFD 695
VSAIGFEGYEKRLEITFSEA VF DP+GRGLRALSR QIDSVLDLA+CTIVS LSN+ FD
Sbjct: 12 VSAIGFEGYEKRLEITFSEAPVFADPDGRGLRALSRAQIDSVLDLARCTIVSELSNKDFD 71
Query: 696 SYVLSESSLFVYPYTVVIKTCGTTKLLLAIPRILELAEELALPLAAVKYSRGAFIFPEAQ 875
SYVLSESSLF+Y +VIKTCGTTKLLL IPRILELAE L++PLAAVKYSRG FIFP AQ
Sbjct: 72 SYVLSESSLFIYSDKIVIKTCGTTKLLLTIPRILELAEGLSMPLAAVKYSRGMFIFPSAQ 131
Query: 876 PSPHKNFSDEVAFLNGYFGGLKSGGNAYVIGDPAKPGQKWHVYYATQQPEQPVVNLEMCM 1055
P+PH++FS+EVA LN YFG LKSGGNAYVIGDPAKPGQKWH+YYATQ PEQP+V LEMCM
Sbjct: 132 PAPHRSFSEEVAVLNRYFGHLKSGGNAYVIGDPAKPGQKWHIYYATQHPEQPMVTLEMCM 191
Query: 1056 TGLDKKKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSA 1235
TGLDK+KASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSA
Sbjct: 192 TGLDKEKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSA 251
Query: 1236 FSTIHVTPEDGFSYGSYEVMGLDPASMAYGDLVKRVLRSFGPSEFSVAVTIFGCPSLAGT 1415
FSTIHVTPEDGFSY SYEV+G D +++AYGDLVKRVLR FGPSEFSVAVTIFG AGT
Sbjct: 252 FSTIHVTPEDGFSYASYEVVGFDASTLAYGDLVKRVLRCFGPSEFSVAVTIFGGHGHAGT 311
Query: 1416 WGERLNVGVYDSTNMVVQELPGGGSLIYQSFTAAGED---SSGSPRSVLNCYVDGNLQSA 1586
W + LN Y NMV QELP GG LIYQSF A ED + GSP+SVL+C+ N+ +
Sbjct: 312 WAKELNADAYKCNNMVEQELPCGGLLIYQSFDAT-EDVPVAVGSPKSVLHCFEAENMVNP 370
Query: 1587 S-----KVDAFLCWEDDAAQEKD 1640
+ K+ L W +DA +E D
Sbjct: 371 APVKEGKLGNLLPWGEDALEEND 393
9637.m02218|protein Adenosylmethionine decarboxylase
Length = 392
Score = 506 bits (1290), Expect = e-143
Identities = 256/374 (68%), Positives = 297/374 (78%), Gaps = 2/374 (0%)
Frame = +3
Query: 519 SAIGFEGYEKRLEITFSEASVFTDPNGRGLRALSRPQIDSVLDLAKCTIVSGLSNEKFDS 698
S IGFEGYEKRLEIT S+A VF DP GRGLRALSR QIDS LDLAKCTIVS LSN+ FDS
Sbjct: 15 SPIGFEGYEKRLEITLSDAPVFVDPCGRGLRALSREQIDSFLDLAKCTIVSHLSNKHFDS 74
Query: 699 YVLSESSLFVYPYTVVIKTCGTTKLLLAIPRILELAEELALPLAAVKYSRGAFIFPEAQP 878
YVLSESSLFVYP+ VV+KTCGTTKLLL+IPRILELA EL+LP+ +VKYSRG FIFP AQP
Sbjct: 75 YVLSESSLFVYPHKVVLKTCGTTKLLLSIPRILELAAELSLPVLSVKYSRGMFIFPGAQP 134
Query: 879 SPHKNFSDEVAFLNGYFGGLKSGGNAYVIGDPAKPGQKWHVYYATQQPEQPVVNLEMCMT 1058
SPH++F +EV+ LN +FGGLKSGGNAYVIGD KP +KWHVYYAT++PEQP+V LEMCMT
Sbjct: 135 SPHRSFLEEVSVLNSFFGGLKSGGNAYVIGDAFKPKKKWHVYYATEEPEQPMVTLEMCMT 194
Query: 1059 GLDKKKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSAF 1238
GLD KKA VFFK S DG S AKEMT SGIS+IIPEMEICDF+F+PCGYSMN I+G A
Sbjct: 195 GLDAKKAEVFFKDSTDGSCSSAKEMTMFSGISEIIPEMEICDFEFDPCGYSMNGIYGPAV 254
Query: 1239 STIHVTPEDGFSYGSYEVMGLDPASMAYGDLVKRVLRSFGPSEFSVAVTIFGCPSLAGTW 1418
STIHVTPE+GFSY SYE M +P+S+ Y DL+K+VL F PS+FSVAVTIFG A +W
Sbjct: 255 STIHVTPEEGFSYASYEAMNFNPSSLVYDDLIKKVLACFCPSDFSVAVTIFGGHGFAKSW 314
Query: 1419 GERLNVGVYDSTNMVVQELPGGGSLIYQSFTAAGEDSSGSPRSVLNCY-VDGNLQSASKV 1595
+ V Y ++V QELPGGG L+YQSFTA + SPRS L+ + DG A
Sbjct: 315 AKGAEVDSYMCDDLVEQELPGGGVLMYQSFTAV-TPGAVSPRSTLDGWNSDGAEMVAKSK 373
Query: 1596 DAFLCWE-DDAAQEKD 1640
+ +CWE + AA++KD
Sbjct: 374 EMSVCWEGEKAAKKKD 389
9637.m02217|protein Adenosylmethionine decarboxylase
Length = 392
Score = 506 bits (1290), Expect = e-143
Identities = 256/374 (68%), Positives = 297/374 (78%), Gaps = 2/374 (0%)
Frame = +3
Query: 519 SAIGFEGYEKRLEITFSEASVFTDPNGRGLRALSRPQIDSVLDLAKCTIVSGLSNEKFDS 698
S IGFEGYEKRLEIT S+A VF DP GRGLRALSR QIDS LDLAKCTIVS LSN+ FDS
Sbjct: 15 SPIGFEGYEKRLEITLSDAPVFVDPCGRGLRALSREQIDSFLDLAKCTIVSHLSNKHFDS 74
Query: 699 YVLSESSLFVYPYTVVIKTCGTTKLLLAIPRILELAEELALPLAAVKYSRGAFIFPEAQP 878
YVLSESSLFVYP+ VV+KTCGTTKLLL+IPRILELA EL+LP+ +VKYSRG FIFP AQP
Sbjct: 75 YVLSESSLFVYPHKVVLKTCGTTKLLLSIPRILELAAELSLPVLSVKYSRGMFIFPGAQP 134
Query: 879 SPHKNFSDEVAFLNGYFGGLKSGGNAYVIGDPAKPGQKWHVYYATQQPEQPVVNLEMCMT 1058
SPH++F +EV+ LN +FGGLKSGGNAYVIGD KP +KWHVYYAT++PEQP+V LEMCMT
Sbjct: 135 SPHRSFLEEVSVLNSFFGGLKSGGNAYVIGDAFKPKKKWHVYYATEEPEQPMVTLEMCMT 194
Query: 1059 GLDKKKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSAF 1238
GLD KKA VFFK S DG S AKEMT SGIS+IIPEMEICDF+F+PCGYSMN I+G A
Sbjct: 195 GLDAKKAEVFFKDSTDGSCSSAKEMTMFSGISEIIPEMEICDFEFDPCGYSMNGIYGPAV 254
Query: 1239 STIHVTPEDGFSYGSYEVMGLDPASMAYGDLVKRVLRSFGPSEFSVAVTIFGCPSLAGTW 1418
STIHVTPE+GFSY SYE M +P+S+ Y DL+K+VL F PS+FSVAVTIFG A +W
Sbjct: 255 STIHVTPEEGFSYASYEAMNFNPSSLVYDDLIKKVLACFCPSDFSVAVTIFGGHGFAKSW 314
Query: 1419 GERLNVGVYDSTNMVVQELPGGGSLIYQSFTAAGEDSSGSPRSVLNCY-VDGNLQSASKV 1595
+ V Y ++V QELPGGG L+YQSFTA + SPRS L+ + DG A
Sbjct: 315 AKGAEVDSYMCDDLVEQELPGGGVLMYQSFTAV-TPGAVSPRSTLDGWNSDGAEMVAKSK 373
Query: 1596 DAFLCWE-DDAAQEKD 1640
+ +CWE + AA++KD
Sbjct: 374 EMSVCWEGEKAAKKKD 389
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124908183
Number of Sequences: 59712
Number of extensions: 3431812
Number of successful extensions: 13050
Number of sequences better than 1.0e-10: 14
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 13037
Number of HSP's gapped (non-prelim): 7
length of query: 652
length of database: 26,991,925
effective HSP length: 53
effective length of query: 598
effective length of database: 23,827,189
effective search space: 14248659022
effective search space used: 14248659022
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 161 (67.1 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG314 Members:21 3pri:Y 1e-101
NP_199430.1 ornithine--oxo-acid aminotransferase (ornithine
aminotransferase/ornithine ketoacid aminotransferase),
(1393 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m04261|protein Similar to ornithine aminotransferase 609 e-174
9633.m00308|protein glutamate--cysteine ligase, putative 167 5e-41
9635.m02693|protein acetylornithine aminotransferase, mit... 150 7e-36
9636.m01011|protein gamma-aminobutyrate transaminase subu... 130 5e-30
9630.m00122|protein aminotransferase, putative 120 4e-27
9632.m05081|protein aminotransferase-like protein 118 3e-26
9631.m02196|protein aminotransferase, putative 108 2e-23
9633.m03704|protein probable beta-alanine-pyruvate aminot... 108 2e-23
9631.m00692|protein alanine:glyoxylate aminotransferase 2... 108 2e-23
9631.m00691|protein alanine:glyoxylate aminotransferase 2... 108 2e-23
9636.m04266|protein glutamate-1-semialdehyde-2,1-aminomutase 98 4e-20
9631.m04261|protein Similar to ornithine aminotransferase
Length = 444
Score = 609 bits (1553), Expect = e-174
Identities = 297/322 (92%), Positives = 315/322 (97%), Gaps = 17/322 (5%)
Frame = +2
Query: 2 ERLTLSSRAFYNDKFPVFAEYLTTMFGYDMMLPMNTGAEGVETAIKLARKWGYEKKNIPK 181
ERLTLSSRAFYNDKFP+FAEYLT+MFGY+MMLPMNTGAEGVETAIKL RKWGYEKK IPK
Sbjct: 105 ERLTLSSRAFYNDKFPIFAEYLTSMFGYEMMLPMNTGAEGVETAIKLVRKWGYEKKKIPK 164
Query: 182 NEALIVSCCGCFHGRTLGVISMSCDNDATRGFGPLVPGHLKVDFGDINGLEKIFKEHGDR 361
NEALIVSCCGCFHGRTLGVISMSCDNDATRGFGPLVPGHLKVDFGD +GLEKIFK+HG+R
Sbjct: 165 NEALIVSCCGCFHGRTLGVISMSCDNDATRGFGPLVPGHLKVDFGDTDGLEKIFKDHGER 224
Query: 362 ICGFLFEPIQGEAGVIIPPDGYLKAVRDLCSRHNILMIDDEIQTGIARTGKMLACDWEDV 541
ICGFLFEPIQGEAGVIIPPDGYLKAVRDLCSRHNILMI DEIQTGIARTGKMLACDWE++
Sbjct: 225 ICGFLFEPIQGEAGVIIPPDGYLKAVRDLCSRHNILMIADEIQTGIARTGKMLACDWENI 284
Query: 542 RPDMVILGKALGAGVVPVSAVLADKDIMLCIKPGEHGSTFGGNPLASAVAIASLKVVKDE 721
RPD+VILGKALGAGVVPVSAVLADKDIMLCIKPGEHGSTFGGNPLASAVA+ASLKVV DE
Sbjct: 285 RPDVVILGKALGAGVVPVSAVLADKDIMLCIKPGEHGSTFGGNPLASAVAVASLKVVTDE 344
Query: 722 GLVE-----------------RAAELGQEFRDQLQEVQQKFPHIIREIRGRGLLNAVDLS 850
GLVE RAA+LGQEFRDQLQ+VQQ+FP IIRE+RGRGLLNAVDLS
Sbjct: 345 GLVESCMIVYEYLSSKHLLNYRAAKLGQEFRDQLQKVQQRFPQIIREVRGRGLLNAVDLS 404
Query: 851 SKALYPASAYDICIKLKERGILAKPTHDTIIRLAPPISI 967
++AL PASAYDICIKLKERG+LAKPTHDTIIRLAPP+SI
Sbjct: 405 NEALSPASAYDICIKLKERGVLAKPTHDTIIRLAPPLSI 443
9633.m00308|protein glutamate--cysteine ligase, putative
Length = 800
Score = 167 bits (418), Expect = 5e-41
Identities = 100/310 (32%), Positives = 165/310 (52%), Gaps = 3/310 (0%)
Frame = +2
Query: 86 DMMLPMNTGAEGVETAIKLARKWGYEKKNIPKNEAL--IVSCCGCFHGRTLGVISMSCDN 259
D + NTG E E AIK ARK +++ P +A +S CFHGRT+G ++++
Sbjct: 492 DRVFFANTGTEANEAAIKFARK--FQRVARPDGDAPTEFMSFTNCFHGRTMGSLALTSKV 549
Query: 260 DATRGFGPLVPGHLKVDFGDINGLEKIFKEHGDRICGFLFEPIQGEAGVIIPPDGYLKAV 439
F P++PG ++G++ +K+ + +I EP+QGE G+ +L+ +
Sbjct: 550 QYREPFAPVMPGATFAEYGNLEEAKKVIQS--GKIAAVFVEPVQGEGGIHSATKEFLQGL 607
Query: 440 RDLCSRHNILMIDDEIQTGIARTGKMLACDWEDVRPDMVILGKALGAGVVPVSAVLADKD 619
RD C L++ DE+Q G+ RTG + A + V PD++ L K L AG +P+ VL +
Sbjct: 608 RDACDEAGALLVFDEVQCGLGRTGYLWAYEAYGVLPDIMTLAKPL-AGGLPIGVVLVTEK 666
Query: 620 IMLCIKPGEHGSTFGGNPLASAVAIASLKVVKDEGLVERAAELGQEFRDQLQEVQQKFPH 799
+ I G+HG+TFGG PL A+ +L ++ G + A+ G+ F+ L H
Sbjct: 667 VASAINFGDHGTTFGGGPLVCQAALTTLDKIQKPGFLAEVAKKGENFKQLLSTKLSGNAH 726
Query: 800 IIREIRGRGLLNAVDLSSKALYPASAYDICIKLKERGILAKPT-HDTIIRLAPPISISPE 976
++EIRG GL+ ++L A D C+ +RG++ ++RL PP+ IS +
Sbjct: 727 -VKEIRGIGLIVGIELDVPA---GPLVDACL---DRGVIVLTAGKGNVVRLVPPLIISEK 779
Query: 977 ELAEASKALSDVL 1015
EL +A++ + D L
Sbjct: 780 ELEQAAEVIRDCL 792
9635.m02693|protein acetylornithine aminotransferase,
mitochondrial precursor (ec 2.6.1.11) (acoat)
(acetylornithine transaminase) (aota). [alder
Length = 448
Score = 150 bits (374), Expect = 7e-36
Identities = 90/277 (32%), Positives = 146/277 (52%), Gaps = 2/277 (0%)
Frame = +2
Query: 86 DMMLPMNTGAEGVETAIKLARKWGYEKKNIPKNEAL--IVSCCGCFHGRTLGVISMSCDN 259
D + NTG E E AIK ARK Y++ P +A +S CFHGRT+G ++++
Sbjct: 168 DRVFFANTGTEANEAAIKFARK--YQRVARPDGDAPTEFMSFTNCFHGRTMGSLALTSKV 225
Query: 260 DATRGFGPLVPGHLKVDFGDINGLEKIFKEHGDRICGFLFEPIQGEAGVIIPPDGYLKAV 439
F P++PG ++G++ +K+ + +I EP+QGE G+ +L+ +
Sbjct: 226 QYREPFAPVMPGATFAEYGNLEEAKKVIQS--GKIAAVFVEPMQGEGGIHSATKEFLQGL 283
Query: 440 RDLCSRHNILMIDDEIQTGIARTGKMLACDWEDVRPDMVILGKALGAGVVPVSAVLADKD 619
RD C L++ DE+Q G+ RTG + A + V PD++ L K L AG +P+ VL +
Sbjct: 284 RDACDEAGALLVFDEVQCGLGRTGYLWAYEAYGVVPDIMTLAKPL-AGGLPIGVVLVTEK 342
Query: 620 IMLCIKPGEHGSTFGGNPLASAVAIASLKVVKDEGLVERAAELGQEFRDQLQEVQQKFPH 799
+ I G+HG+TFGG PL A+ +L ++ G + A+ G+ F+ L H
Sbjct: 343 VASAINYGDHGTTFGGGPLVCQAALTTLDKIQKPGFLAEVAKKGENFKQLLSTKLSGNAH 402
Query: 800 IIREIRGRGLLNAVDLSSKALYPASAYDICIKLKERGIL 916
++EIRG GL+ ++L A D C+ +RG++
Sbjct: 403 -VKEIRGIGLIVGIELDVPA---GPLVDACL---DRGVI 434
9636.m01011|protein gamma-aminobutyrate transaminase subunit
precursor isozyme 3
Length = 510
Score = 130 bits (324), Expect = 5e-30
Identities = 95/305 (31%), Positives = 162/305 (52%), Gaps = 33/305 (10%)
Frame = +2
Query: 104 NTGAEGVETAIKLARKWGYEKKNIPKNEALIVSCCGCFHGRTLGVISMS----------- 250
N+G+E ++ +KL W Y N+ ++ +HG TL S+S
Sbjct: 164 NSGSEANDSQVKLV--WYYNNALGRPNKKKFIARSKSYHGSTLVSASLSGLPALHQKFDL 221
Query: 251 -----CDNDATRGFGPLVPGHLKVDFGD--INGLEK-IFKEHGDRICGFLFEPIQGEAGV 406
D + +P + +F LE I KE + I F+ EP+ G GV
Sbjct: 222 PAPFVLHTDCPHYWRFHLPDETEEEFATRLATNLENLILKEGPETIAAFIAEPVMGAGGV 281
Query: 407 IIPPDGYLKAVRDLCSRHNILMIDDEIQTGIARTGKMLACDWEDVRPDMVILGKALGAGV 586
I PP Y + ++ + +++IL+I DE+ T R G M CD D++PD+V + KAL +
Sbjct: 282 IPPPKTYFEKIQAVLKKYDILLIADEVITAFGRLGTMFGCDMYDIKPDLVSIAKALSSAY 341
Query: 587 VPVSAVLADKDIMLCI-----KPGE--HGSTFGGNPLASAVAIASLKVVKDEGLVERAAE 745
+P+ A+L +I I K G HG T+ G+P++ AVAI +LK+ K+ ++E +
Sbjct: 342 MPIGAILVSPEITDVIYSQSNKLGSFAHGFTYSGHPVSCAVAIEALKIYKERNIIEHVQK 401
Query: 746 LGQEFRDQLQEVQQKFPHIIREIRGRGLLNAVDL----SSKALYPAS---AYDICIKLKE 904
+ F++ ++ I+ EIRG GL+ + S +PA + ++
Sbjct: 402 IAPRFQEGIKAFSGS--PIVGEIRGLGLILGTEFVDNKSPNDPFPAEWGVGSLFGAECEK 459
Query: 905 RGILAKPTHDTIIRLAPPISISPEELAEASKALSDVLE 1018
RG+L + D I+ L+PP+ ++P+E+ E D L+
Sbjct: 460 RGMLIRVAGDNIM-LSPPLIMTPDEVEEIICKYGDALK 496
9630.m00122|protein aminotransferase, putative
Length = 765
Score = 120 bits (299), Expect = 4e-27
Identities = 91/305 (29%), Positives = 159/305 (51%), Gaps = 21/305 (6%)
Frame = +2
Query: 104 NTGAEGVETAIKLARKWGYEKKNIPKNEALIVSCCGCFHGRTLGVISMS----CDNDATR 271
N+G+E ++ +K+ W Y + I+S +HG T S+S C +
Sbjct: 436 NSGSEANDSQVKIV--WYYNNALGRPKKKNIISRTQSYHGTTFISASLSGILICQDVLFC 493
Query: 272 GFGPLVPG---HLKVDFGDINGLEKIFKEHGDRICGFLFEPIQGEAGVIIPPDGYLKAVR 442
L G L F +IN G +I F+ EP+ G GVI+PP Y + ++
Sbjct: 494 TQTALTTGASISLSAFFDEINDF------CGRQIAAFIAEPVIGAGGVILPPKTYFEKIQ 547
Query: 443 DLCSRHNILMIDDEIQTGIARTGKMLACDWEDVRPDMVILGKALGAGVVPVSAVLADKDI 622
+ +++IL I DE+ TG R G M D +++PD+V L KAL + P+ A+L +I
Sbjct: 548 AVVKKYDILFIVDEVITGFGRLGTMFGSDLYNIKPDLVSLAKALSSAYAPIGAILVSPEI 607
Query: 623 MLCI-----KPG--EHGSTFGGNPLASAVAIASLKVVKDEGLVERAAELGQEFRDQLQEV 781
I K G HG T+ G+P++ AVA+ +LK+ ++ + + Q F++ ++
Sbjct: 608 SDVIHSHSNKLGTFAHGFTYSGHPVSCAVALEALKIYRERDIPGHVTHVAQRFQEGIKAF 667
Query: 782 QQKFPHIIREIRGRGLLNAVDLS-SKALYPASAYDICI------KLKERGILAKPTHDTI 940
P I+ E RG GLL A + + +K+ Y ++ + + K+RG++ K +
Sbjct: 668 AAGSP-IVGETRGVGLLIATEFTDNKSPYELFPFEWGVGEIFGQECKKRGMMVK-VLGNL 725
Query: 941 IRLAPPISISPEELAEASKALSDVLE 1018
I ++PP+ I+ EE+ + + L+
Sbjct: 726 IAMSPPLIITREEIDKLVSIYGEALK 751
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81692108
Number of Sequences: 59712
Number of extensions: 2072090
Number of successful extensions: 5959
Number of sequences better than 1.0e-10: 22
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 5928
Number of HSP's gapped (non-prelim): 12
length of query: 464
length of database: 26,991,925
effective HSP length: 52
effective length of query: 411
effective length of database: 23,886,901
effective search space: 9817516311
effective search space used: 9817516311
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG320 Members:4 3pri:Y 9e-44
T02995 unspecific monooxygenase (EC 1.14.14.1) - common
tobacco dbj|BAA10929.1| cytochrome P450 like_TBP [Nicotiana t
(1383 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
***** No hits found ******
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84194810
Number of Sequences: 59712
Number of extensions: 2364121
Number of successful extensions: 10963
Number of sequences better than 1.0e-10: 0
Number of HSP's better than 0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10963
Number of HSP's gapped (non-prelim): 0
length of query: 461
length of database: 26,991,925
effective HSP length: 52
effective length of query: 408
effective length of database: 23,886,901
effective search space: 9745855608
effective search space used: 9745855608
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG322 Members:31 3pri:Y 2e-76
BAA92982.1 unnamed protein product [Oryza sativa (japonica
cultivar-group)] dbj|BAA94790.1| unnamed protein product [Oryz
(1180 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9629.m01274|protein AUX/IAA family 392 e-109
9629.m01273|protein AUX/IAA family 392 e-109
9633.m01237|protein AUX/IAA family 377 e-104
9629.m04665|protein AUX/IAA family 222 9e-58
9633.m04541|protein AUX/IAA family 213 6e-55
9631.m05209|protein putative auxin-responsive protein (wi... 203 4e-52
9640.m04001|protein auxin-responsive protein IAA1 199 8e-51
9635.m00801|protein AUX/IAA family 172 9e-43
9640.m04002|protein AUX/IAA family 171 2e-42
9634.m02250|protein IAA14 168 2e-41
9631.m04182|protein Similar to auxin-induced protein 22d ... 165 1e-40
9631.m05210|protein putative auxin-responsive protein (wi... 159 7e-39
9629.m00770|protein AUX/IAA family 142 1e-33
9631.m04181|protein auxin-induced protein aux28. [soybean 138 1e-32
9630.m05694|protein Similar to At2g33310 138 2e-32
9631.m05736|protein putative auxin-induced protein 137 4e-32
9630.m05695|protein Similar to At2g33310 134 4e-31
9634.m03786|protein IAA14 133 5e-31
9629.m00893|protein AUX/IAA family 122 1e-27
9629.m00892|protein AUX/IAA family 121 2e-27
9629.m01274|protein AUX/IAA family
Length = 263
Score = 392 bits (996), Expect = e-109
Identities = 206/245 (84%), Positives = 222/245 (90%), Gaps = 22/245 (8%)
Frame = +1
Query: 127 MSPPLQLDYIGLS---------AAAGGRADD-DLKGTELRLGLPGCESPDRRPVA----- 261
MSPPL+LDYIGLS +AA RADD DLKGTELRLGLPG ESPDRRP A
Sbjct: 1 MSPPLELDYIGLSPPPPPPSSSSAAAARADDVDLKGTELRLGLPGSESPDRRPAAIAAAA 60
Query: 262 -ATTTLELLPAKGAKRGFSDEVLPPAPSAAGGKGK------ETSGDEKDKKVAAPPQPAA 420
TTLELLPAKGAKR F DE P+AA GKGK E +E+DKKVAAPPQPAA
Sbjct: 61 ATATTLELLPAKGAKRVFPDEAALTPPTAAAGKGKAAREGEEVGAEEEDKKVAAPPQPAA 120
Query: 421 KAQVVGWPPIRSYRKNTMATTTNQLKSSKEDSDAKQGQEFLYVKVSMDGAPYLRKVDLKT 600
KAQVVGWPPIRSYRKNTMAT NQ+KS+KED DAKQGQ FLYVKVSMDGAPYLRKVDLKT
Sbjct: 121 KAQVVGWPPIRSYRKNTMAT--NQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKT 178
Query: 601 YKNYKDLSLGLEKMFIGFSTGKDGVSENRKDGEYVLTYEDKDGDWMLVGDVPWEMFTESC 780
YKNYKD+SLGLEKMFIGFSTGK+G +EN+KDGEYVLTYEDKDGDWMLVGDVPWEMFT+SC
Sbjct: 179 YKNYKDMSLGLEKMFIGFSTGKEG-AENQKDGEYVLTYEDKDGDWMLVGDVPWEMFTDSC 237
Query: 781 RRLRVMKGSDAVGLAVPRAGDKSKNKN 861
RRLR+MKGSDA+GLA PRAG+KSKN+N
Sbjct: 238 RRLRIMKGSDAIGLA-PRAGEKSKNRN 263
9629.m01273|protein AUX/IAA family
Length = 263
Score = 392 bits (996), Expect = e-109
Identities = 206/245 (84%), Positives = 222/245 (90%), Gaps = 22/245 (8%)
Frame = +1
Query: 127 MSPPLQLDYIGLS---------AAAGGRADD-DLKGTELRLGLPGCESPDRRPVA----- 261
MSPPL+LDYIGLS +AA RADD DLKGTELRLGLPG ESPDRRP A
Sbjct: 1 MSPPLELDYIGLSPPPPPPSSSSAAAARADDVDLKGTELRLGLPGSESPDRRPAAIAAAA 60
Query: 262 -ATTTLELLPAKGAKRGFSDEVLPPAPSAAGGKGK------ETSGDEKDKKVAAPPQPAA 420
TTLELLPAKGAKR F DE P+AA GKGK E +E+DKKVAAPPQPAA
Sbjct: 61 ATATTLELLPAKGAKRVFPDEAALTPPTAAAGKGKAAREGEEVGAEEEDKKVAAPPQPAA 120
Query: 421 KAQVVGWPPIRSYRKNTMATTTNQLKSSKEDSDAKQGQEFLYVKVSMDGAPYLRKVDLKT 600
KAQVVGWPPIRSYRKNTMAT NQ+KS+KED DAKQGQ FLYVKVSMDGAPYLRKVDLKT
Sbjct: 121 KAQVVGWPPIRSYRKNTMAT--NQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKT 178
Query: 601 YKNYKDLSLGLEKMFIGFSTGKDGVSENRKDGEYVLTYEDKDGDWMLVGDVPWEMFTESC 780
YKNYKD+SLGLEKMFIGFSTGK+G +EN+KDGEYVLTYEDKDGDWMLVGDVPWEMFT+SC
Sbjct: 179 YKNYKDMSLGLEKMFIGFSTGKEG-AENQKDGEYVLTYEDKDGDWMLVGDVPWEMFTDSC 237
Query: 781 RRLRVMKGSDAVGLAVPRAGDKSKNKN 861
RRLR+MKGSDA+GLA PRAG+KSKN+N
Sbjct: 238 RRLRIMKGSDAIGLA-PRAGEKSKNRN 263
9633.m01237|protein AUX/IAA family
Length = 257
Score = 377 bits (959), Expect = e-104
Identities = 203/245 (82%), Positives = 219/245 (88%), Gaps = 17/245 (6%)
Frame = +1
Query: 127 MSPPLQLDYIGLS----AAAGGRADDDLKGTELRLGLPGCESPDRRPVAATTTLELLPA- 291
MSPPL+LDYIGLS AAA AD+DLKGTELRLGLPG SPDR P AAT L+LLPA
Sbjct: 1 MSPPLELDYIGLSPPVPAAADAAADNDLKGTELRLGLPGSHSPDRSPPAAT--LDLLPAA 58
Query: 292 KGAKRGFSDEVLP----PAPSAAGGKGKETSG-------DEKDKKVAAPPQ-PAAKAQVV 435
KGAKRGFSDE P A +AA GKGK+ + +E+DKKVAA PQ PAAKAQVV
Sbjct: 59 KGAKRGFSDEARPLPASAAAAAAAGKGKKAAAGEEDEDAEEEDKKVAAAPQAPAAKAQVV 118
Query: 436 GWPPIRSYRKNTMATTTNQLKSSKEDSDAKQGQEFLYVKVSMDGAPYLRKVDLKTYKNYK 615
GWPPIRSYRKNTMAT NQLKSSKED++AKQGQ FLYVKVSMDGAPYLRKVDLKTYKNYK
Sbjct: 119 GWPPIRSYRKNTMAT--NQLKSSKEDAEAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYK 176
Query: 616 DLSLGLEKMFIGFSTGKDGVSENRKDGEYVLTYEDKDGDWMLVGDVPWEMFTESCRRLRV 795
DLS LEKMFIGF+TGKDG+SE+RKDGEYVLTYEDKDGDWMLVGDVPWEMF SCRRLR+
Sbjct: 177 DLSTALEKMFIGFTTGKDGLSESRKDGEYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRI 236
Query: 796 MKGSDAVGLAVPRAGDKSKNKN 861
MKGSDA+GLA PRA DKSKN+N
Sbjct: 237 MKGSDAIGLA-PRAVDKSKNRN 257
9629.m04665|protein AUX/IAA family
Length = 271
Score = 222 bits (560), Expect = 9e-58
Identities = 137/241 (56%), Positives = 170/241 (69%), Gaps = 33/241 (13%)
Frame = +1
Query: 127 MSPPLQL-DYIGLSAAAGGRADD------------DLKGTEL--RLGLPGCESPDRRPVA 261
MSPPL+ DYIGLSAAA + +G L RLGLPG ESP+R VA
Sbjct: 1 MSPPLEPHDYIGLSAAAASPTPSSSSCSSSPNPGGEARGPRLTLRLGLPGSESPEREVVA 60
Query: 262 ATTTLELLPAK----GAKRGFSDEVLPPAPSAAGGKGKETSGDEKDKKVAAPPQPAAKAQ 429
A TL LP +KR F D P +++G + +K AAPP AAKAQ
Sbjct: 61 AGLTLGPLPPTTTKAASKRAFPDSS-PRHGASSGSVAAAAACQDKAAPAAAPP--AAKAQ 117
Query: 430 VVGWPPIRSYRKNTMATTTNQLKSSKEDSDAKQGQEFLYVKVSMDGAPYLRKVDLKTYKN 609
VVGWPP+R+YRKNT+A + + K ED +G LYVKVSMDGAPYLRKVDLK Y +
Sbjct: 118 VVGWPPVRNYRKNTLAASAS--KGKGEDKGTAEGGP-LYVKVSMDGAPYLRKVDLKMYSS 174
Query: 610 YKDLSLGLEKMFIGFSTGKDGV--SENR------------KDGEYVLTYEDKDGDWMLVG 747
Y+DLS+ LEKMF F TG+ G+ S NR +D EYVLTYEDKD DWMLVG
Sbjct: 175 YEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVG 234
Query: 748 DVPWEMFTESCRRLRVMKGSDAVGLAVPRAGDKS 849
D+PW++FT CR+L++M+GSDA G+A PR+ ++S
Sbjct: 235 DLPWDLFTTICRKLKIMRGSDAAGIA-PRSIEQS 267
9633.m04541|protein AUX/IAA family
Length = 281
Score = 213 bits (536), Expect = 6e-55
Identities = 134/244 (54%), Positives = 163/244 (65%), Gaps = 40/244 (16%)
Frame = +1
Query: 127 MSPPLQL-DYIGLSAAAGGRADDDLKGTE----------LRLGLPGCESPDR---RPVAA 264
M PPL+ DYIGL+A+ + T LRLGLPG ESP R V
Sbjct: 1 MPPPLEARDYIGLAASPASSSSSCCASTPVAEVVGAHLALRLGLPGSESPARAEAEAVVV 60
Query: 265 TTTLELLPAK----GAKRGFSDEVLPP----APSAAGGKGKETSGDEKDKK----VAAPP 408
L L PA GAKRGF D + A + AG + +E+++K AA
Sbjct: 61 DAALTLGPAPPPRGGAKRGFVDSLDRSEGRRAAATAGDDERGVREEEEEEKGLGEAAAGA 120
Query: 409 QPAAKAQVVGWPPIRSYRKNTMATTTNQLKSSKEDSDAKQGQEFLYVKVSMDGAPYLRKV 588
AAKAQVVGWPP+RSYRKNT+A + + K + K YVKVSMDGAPYLRKV
Sbjct: 121 PRAAKAQVVGWPPVRSYRKNTLAASATKTKG---EDQGKSEVGCCYVKVSMDGAPYLRKV 177
Query: 589 DLKTYKNYKDLSLGLEKMFIGFSTGK-------------DGV-SENRKDGEYVLTYEDKD 726
DLKTY +Y+DLSL LEKMF F TG+ DG ++ KD EYVLTYEDKD
Sbjct: 178 DLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKD 237
Query: 727 GDWMLVGDVPWEMFTESCRRLRVMKGSDAVGLAVPRAGDKSKNK 858
DWMLVGD+PW++FT SCR+LR+M+GSDA G+A +NK
Sbjct: 238 ADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRSLEQTGQNK 281
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87339948
Number of Sequences: 59712
Number of extensions: 3220893
Number of successful extensions: 79081
Number of sequences better than 1.0e-10: 55
Number of HSP's better than 0.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 78950
Number of HSP's gapped (non-prelim): 52
length of query: 393
length of database: 26,991,925
effective HSP length: 51
effective length of query: 341
effective length of database: 23,946,613
effective search space: 8165795033
effective search space used: 8165795033
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG326 Members:280 3pri:Y 1e-130
AAN86274.1 non-cell-autonomous heat shock cognate protein 70
[Cucurbita maxima]
(2282 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9639.m04467|protein dnaK-type molecular chaperone hsp70 -... 1230 0.0
9631.m05972|protein heat shock protein cognate 70 1225 0.0
9633.m03578|protein dnaK protein 1217 0.0
9631.m01647|protein dnaK protein 1217 0.0
9629.m06146|protein dnaK protein 1215 0.0
9631.m01656|protein heat shock cognate 70 kda protein 1157 0.0
9639.m04468|protein dnaK-type molecular chaperone hsp70 -... 1119 0.0
9633.m03577|protein dnaK protein 1052 0.0
9630.m00144|protein dnaK-type molecular chaperone BiP - rice 831 0.0
9633.m03294|protein luminal binding protein 5 precursor (... 786 0.0
9631.m04907|protein putative luminal binding protein 781 0.0
9631.m01650|protein dnaK protein 778 0.0
9636.m04621|protein BiP-isoform D 764 0.0
9633.m02768|protein luminal binding protein 4 precursor (... 738 0.0
9639.m00793|protein dnaK protein, putative 644 0.0
9629.m04774|protein dnaK protein 571 e-162
9639.m00795|protein Similar to dnaK-type molecular chaper... 570 e-162
9630.m05282|protein dnaK protein 566 e-161
9631.m00134|protein dnaK protein 559 e-159
9639.m00796|protein Similar to hsp70 555 e-157
9639.m04467|protein dnaK-type molecular chaperone hsp70 - rice
(fragment)
Length = 649
Score = 1230 bits (3147), Expect = 0.0
Identities = 611/647 (94%), Positives = 634/647 (97%), Gaps = 2/647 (0%)
Frame = +3
Query: 96 MAAKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN 275
MA KG+GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTDSERLIGDAAKN
Sbjct: 1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKN 60
Query: 276 QVAMNPINTVFDAKRLIGRRFTDSTVQSDIKLWPFKVVAGPGDKPMINVQYKGEEKQFAA 455
QVAMNPINTVFDAKRLIGRRF+D++VQSDIKLWPFKV+AGPGDKPMI VQYKGEEKQFAA
Sbjct: 61 QVAMNPINTVFDAKRLIGRRFSDASVQSDIKLWPFKVIAGPGDKPMIVVQYKGEEKQFAA 120
Query: 456 EEISSMVLIKMREIAEAFLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGINVLRIINEP 635
EEISSMVLIKMREIAEA+LG+T+KNAVVTVPAYFNDSQRQATKDAGVIAG+NV+RIINEP
Sbjct: 121 EEISSMVLIKMREIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP 180
Query: 636 TAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 815
TAAAIAYGLDKKA+SVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
Sbjct: 181 TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 240
Query: 816 NRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGIDFY 995
NRMVNHFVQEFKRKNKKDI+GNPRALRRLRT+CERAKRTLSSTAQTTIEIDSL+EGIDFY
Sbjct: 241 NRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY 300
Query: 996 STITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 1175
STITRARFEE+NMDLFRKCMEPVEKCLRDAKMDKS+VHDVVLVGGSTRIP+VQQLLQDFF
Sbjct: 301 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPRVQQLLQDFF 360
Query: 1176 NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI 1355
NGKELCK+INPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
Sbjct: 361 NGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI 420
Query: 1356 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 1535
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
Sbjct: 421 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 480
Query: 1536 TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKK 1715
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKK
Sbjct: 481 TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKK 540
Query: 1716 KVESKNALENYSYNMRNTIKDEKIASKLPADDKKKIEEAIDAAIQWLDTNQLAEADEFED 1895
KVESKNALENY+YNMRNTIKDEKIASKLPA DKKKIE+AID AIQWLD NQLAEADEF+D
Sbjct: 541 KVESKNALENYAYNMRNTIKDEKIASKLPAADKKKIEDAIDQAIQWLDGNQLAEADEFDD 600
Query: 1896 KMKELEALCNPIIAKMYQGAGADMEGGMDDD--TPAASGGPGPKIEEVD 2036
KMKELE +CNPIIAKMYQGAGADM GGMD+D PA G GPKIEEVD
Sbjct: 601 KMKELEGICNPIIAKMYQGAGADMAGGMDEDDAPPAGGSGAGPKIEEVD 649
9631.m05972|protein heat shock protein cognate 70
Length = 649
Score = 1225 bits (3134), Expect = 0.0
Identities = 605/644 (93%), Positives = 633/644 (97%), Gaps = 1/644 (0%)
Frame = +3
Query: 105 KGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVA 284
KG+GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVA
Sbjct: 5 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVA 64
Query: 285 MNPINTVFDAKRLIGRRFTDSTVQSDIKLWPFKVVAGPGDKPMINVQYKGEEKQFAAEEI 464
MNPINTVFDAKRLIGRRF+D++VQSDIK+WP+KV+ GPGDKPMI VQYKGEEKQF+AEEI
Sbjct: 65 MNPINTVFDAKRLIGRRFSDASVQSDIKMWPYKVIPGPGDKPMIVVQYKGEEKQFSAEEI 124
Query: 465 SSMVLIKMREIAEAFLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGINVLRIINEPTAA 644
SSMVLIKMREIAEA+LGSTVKNAVVTVPAYFNDSQRQATKDAGVIAG+NV+RIINEPTAA
Sbjct: 125 SSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAA 184
Query: 645 AIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM 824
AIAYGLDKKA+SVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR+
Sbjct: 185 AIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRL 244
Query: 825 VNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGIDFYSTI 1004
VNHFVQEFKRK+KKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEG+DFYSTI
Sbjct: 245 VNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGVDFYSTI 304
Query: 1005 TRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGK 1184
TRARFEE+NMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIP+VQQLLQDFFNGK
Sbjct: 305 TRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFFNGK 364
Query: 1185 ELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRN 1364
ELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRN
Sbjct: 365 ELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRN 424
Query: 1365 TTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVC 1544
TTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVC
Sbjct: 425 TTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVC 484
Query: 1545 FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVE 1724
FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQ+AEKYKSEDEEHKKKV+
Sbjct: 485 FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQDAEKYKSEDEEHKKKVD 544
Query: 1725 SKNALENYSYNMRNTIKDEKIASKLPADDKKKIEEAIDAAIQWLDTNQLAEADEFEDKMK 1904
+KN+LENY+YNMRNTI+DEKIASKLPADDKKKIE+A++ AIQWLD NQLAE +EFEDKMK
Sbjct: 545 AKNSLENYAYNMRNTIQDEKIASKLPADDKKKIEDAVEQAIQWLDNNQLAEVEEFEDKMK 604
Query: 1905 ELEALCNPIIAKMYQGAGADMEGGMDDDTPAASG-GPGPKIEEVD 2036
ELE LCNPIIAKMYQGAGADM GGMDDD PAA G G GPKIEEVD
Sbjct: 605 ELEGLCNPIIAKMYQGAGADMGGGMDDDAPAAGGSGAGPKIEEVD 649
9633.m03578|protein dnaK protein
Length = 646
Score = 1217 bits (3115), Expect = 0.0
Identities = 601/645 (93%), Positives = 627/645 (97%)
Frame = +3
Query: 102 AKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQV 281
+KG+GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQV
Sbjct: 2 SKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 61
Query: 282 AMNPINTVFDAKRLIGRRFTDSTVQSDIKLWPFKVVAGPGDKPMINVQYKGEEKQFAAEE 461
AMNP NTVFDAKRLIGRRF+D +VQSD+KLWPFKVV GPGDKPMI VQYKGEEKQFAAEE
Sbjct: 62 AMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVVPGPGDKPMIVVQYKGEEKQFAAEE 121
Query: 462 ISSMVLIKMREIAEAFLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGINVLRIINEPTA 641
ISSMVLIKMREIAEA+LGS++KNAVVTVPAYFNDSQRQATKDAGVIAG+NV+RIINEPTA
Sbjct: 122 ISSMVLIKMREIAEAYLGSSIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTA 181
Query: 642 AAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR 821
AAIAYGLDKKA+S GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR
Sbjct: 182 AAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR 241
Query: 822 MVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGIDFYST 1001
MVNHFVQEFKRKNKKDISGNPRALRRLRT+CERAKRTLSSTAQTTIEIDSL+EGIDFY+T
Sbjct: 242 MVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTT 301
Query: 1002 ITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNG 1181
ITRARFEE+NMDLFRKCMEPVEKCLRDAKMDKS+VHDVVLVGGSTRIPKVQQLLQDFFNG
Sbjct: 302 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNG 361
Query: 1182 KELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPR 1361
KELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPR
Sbjct: 362 KELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPR 421
Query: 1362 NTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 1541
NTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI V
Sbjct: 422 NTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQINV 481
Query: 1542 CFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKV 1721
CFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYK+EDEEHKKKV
Sbjct: 482 CFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKV 541
Query: 1722 ESKNALENYSYNMRNTIKDEKIASKLPADDKKKIEEAIDAAIQWLDTNQLAEADEFEDKM 1901
++KNALENY+YNMRNTIKDEKIASKL ADDKK+IE+AID AI WLDTNQLAEADEFEDKM
Sbjct: 542 DAKNALENYAYNMRNTIKDEKIASKLAADDKKRIEDAIDGAISWLDTNQLAEADEFEDKM 601
Query: 1902 KELEALCNPIIAKMYQGAGADMEGGMDDDTPAASGGPGPKIEEVD 2036
KELE +CNPIIAKMYQG GADM GGMD+D PA G GPKIEEVD
Sbjct: 602 KELEGICNPIIAKMYQGPGADMAGGMDEDAPAGGSGAGPKIEEVD 646
9631.m01647|protein dnaK protein
Length = 650
Score = 1217 bits (3114), Expect = 0.0
Identities = 601/647 (92%), Positives = 633/647 (96%), Gaps = 3/647 (0%)
Frame = +3
Query: 96 MAAKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN 275
MA KGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN
Sbjct: 1 MAGKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN 60
Query: 276 QVAMNPINTVFDAKRLIGRRFTDSTVQSDIKLWPFKVVAGPGDKPMINVQYKGEEKQFAA 455
QVAMNPINTVFDAKRLIGRRF+D++VQSD KLWPFKV+ GPGDKPMI VQYKGEEKQF+A
Sbjct: 61 QVAMNPINTVFDAKRLIGRRFSDTSVQSDAKLWPFKVLPGPGDKPMIGVQYKGEEKQFSA 120
Query: 456 EEISSMVLIKMREIAEAFLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGINVLRIINEP 635
EEISSMVL KM+E AEA+LGSTVKNAVVTVPAYFNDSQRQATKDAGVI+G+NV+RIINEP
Sbjct: 121 EEISSMVLNKMKETAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP 180
Query: 636 TAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 815
TAAAIAYGLDKK+SSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
Sbjct: 181 TAAAIAYGLDKKSSSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 240
Query: 816 NRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGIDFY 995
NRMVNHFVQEFKRKNKKDI+GNPRALRRLRT+CERAKRTLSSTAQTTIEIDSL+EGIDFY
Sbjct: 241 NRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY 300
Query: 996 STITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 1175
+TITRARFEE+NMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIP+VQQLLQDFF
Sbjct: 301 TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFF 360
Query: 1176 NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI 1355
NGKELCKSINPDEAVAYGAAVQAAIL+GEGNEKVQDLLLLDVTPLS GLETAGGVMTVLI
Sbjct: 361 NGKELCKSINPDEAVAYGAAVQAAILTGEGNEKVQDLLLLDVTPLSQGLETAGGVMTVLI 420
Query: 1356 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 1535
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRT+DNNLLGKFELSGIPPAPRGVPQI
Sbjct: 421 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELSGIPPAPRGVPQI 480
Query: 1536 TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKK 1715
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKE+IEKMVQEAEKYK+EDEEHKK
Sbjct: 481 TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKAEDEEHKK 540
Query: 1716 KVESKNALENYSYNMRNTIKDEKIASKLPADDKKKIEEAIDAAIQWLDTNQLAEADEFED 1895
KV++KN+LENY+YNMRNTIKD+KIASKLP DKKKIE+AID AI WLD+NQLAEA+EFED
Sbjct: 541 KVDAKNSLENYAYNMRNTIKDDKIASKLPEADKKKIEDAIDGAISWLDSNQLAEAEEFED 600
Query: 1896 KMKELEALCNPIIAKMYQGAGADMEGGMDDDTPAASG---GPGPKIEEVD 2036
KMKELE +CNPIIAKMYQGAGADM GGMD+D PAA+G GPGPKIEEVD
Sbjct: 601 KMKELEGVCNPIIAKMYQGAGADMAGGMDEDAPAAAGGSSGPGPKIEEVD 650
9629.m06146|protein dnaK protein
Length = 648
Score = 1215 bits (3110), Expect = 0.0
Identities = 603/645 (93%), Positives = 629/645 (97%), Gaps = 2/645 (0%)
Frame = +3
Query: 102 AKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQV 281
AKG+GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQV
Sbjct: 2 AKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQV 61
Query: 282 AMNPINTVFDAKRLIGRRFTDSTVQSDIKLWPFKVVAGPGDKPMINVQYKGEEKQFAAEE 461
AMNPINTVFDAKRLIGRRF+D +VQSD+KLWPFKV+ GPGDKPMI VQYKGEEKQF+AEE
Sbjct: 62 AMNPINTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPGDKPMIVVQYKGEEKQFSAEE 121
Query: 462 ISSMVLIKMREIAEAFLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGINVLRIINEPTA 641
ISSMVLIKMREIAEA+LGS +KNAVVTVPAYFNDSQRQATKDAGVIAG+NV+RIINEPTA
Sbjct: 122 ISSMVLIKMREIAEAYLGSNIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTA 181
Query: 642 AAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR 821
AAIAYGLDKKA+S GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR
Sbjct: 182 AAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR 241
Query: 822 MVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGIDFYST 1001
MVNHFV EFKRKNKKDISGNPRALRRLRT+CERAKRTLSSTAQTTIEIDSL+EGIDFYST
Sbjct: 242 MVNHFVLEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYST 301
Query: 1002 ITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNG 1181
ITRARFEE+NMDLFRKCMEPVEKCLRDAKMDKS+VHDVVLVGGSTRIPKVQQLLQDFFNG
Sbjct: 302 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNG 361
Query: 1182 KELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPR 1361
KELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPR
Sbjct: 362 KELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPR 421
Query: 1362 NTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 1541
NTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQITV
Sbjct: 422 NTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITV 481
Query: 1542 CFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKV 1721
CFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYK+EDEEHKKKV
Sbjct: 482 CFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKV 541
Query: 1722 ESKNALENYSYNMRNTIKDEKIASKLPADDKKKIEEAIDAAIQWLDTNQLAEADEFEDKM 1901
++KNALENY+YNMRNTIKD+KIASKL ADDKKKIE+AID AI WLD+NQLAEADEFEDKM
Sbjct: 542 DAKNALENYAYNMRNTIKDDKIASKLSADDKKKIEDAIDGAINWLDSNQLAEADEFEDKM 601
Query: 1902 KELEALCNPIIAKMYQGAGADMEG--GMDDDTPAASGGPGPKIEEVD 2036
KELE++CNPIIAKMYQGAGADM G GMD+D PA G GPKIEEVD
Sbjct: 602 KELESICNPIIAKMYQGAGADMGGAAGMDEDAPAGGSGAGPKIEEVD 648
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 154788981
Number of Sequences: 59712
Number of extensions: 4744596
Number of successful extensions: 32762
Number of sequences better than 1.0e-10: 53
Number of HSP's better than 0.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 32586
Number of HSP's gapped (non-prelim): 53
length of query: 760
length of database: 26,991,925
effective HSP length: 53
effective length of query: 707
effective length of database: 23,827,189
effective search space: 16845822623
effective search space used: 16845822623
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 162 (67.5 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG374 Members:69 3pri:Y 1e-115
T06801 probable superoxide dismutase (EC 1.15.1.1) (Mn)
precursor - wheat gb|AAB68036.1| manganese superoxide dismuta
(1148 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9633.m02330|protein probable superoxide dismutase (EC 1.1... 411 e-114
9634.m00431|protein superoxide dismutase (EC 1.15.1.1) (F... 114 3e-25
9634.m00430|protein superoxide dismutase (EC 1.15.1.1) (F... 114 3e-25
9634.m00154|protein Iron/manganese superoxide dismutases,... 96 1e-19
9634.m00155|protein Iron/manganese superoxide dismutases,... 69 1e-11
9633.m02330|protein probable superoxide dismutase (EC 1.15.1.1)
(Mn) precursor - rice
Length = 231
Score = 411 bits (1044), Expect = e-114
Identities = 195/226 (86%), Positives = 205/226 (90%), Gaps = 5/226 (2%)
Frame = +3
Query: 51 MALRTLATKRTLG-----LALGGARRGVATFTLPDLPYDYGALEPAVSGEIMRLHHQKHH 215
MALRTLA+++TL LA A RGV T LPDLPYDYGALEPA+SGEIMRLHHQKHH
Sbjct: 1 MALRTLASRKTLAAAALPLAAAAAARGVTTVALPDLPYDYGALEPAISGEIMRLHHQKHH 60
Query: 216 ATYVANYNKALEQLDAAVGKGDASGVVHLQSAIKFNGGGHVNHSIFWKNLKPISEGGGEP 395
ATYVANYNKALEQLDAAV KGDA +VHLQSAIKFNGGGHVNHSIFW NLKPISEGGG+P
Sbjct: 61 ATYVANYNKALEQLDAAVAKGDAPAIVHLQSAIKFNGGGHVNHSIFWNNLKPISEGGGDP 120
Query: 396 PHGKLGWAIDEDFGSIEKLIKKMNAEGAALQGSGWVWLALDKEAKKLSVETTPNQDPLVT 575
PH KLGWAIDEDFGS E L+KKM+AEGAALQGSGWVWLALDKEAKKLSVETT NQDPLVT
Sbjct: 121 PHAKLGWAIDEDFGSFEALVKKMSAEGAALQGSGWVWLALDKEAKKLSVETTANQDPLVT 180
Query: 576 KGANLYPLLGIDVWEHAYYLQYKNVRPDYLTNIWKVVNWKYAGEEYEKVLA 728
KGANL PLLGIDVWEHAYYLQYKNVRPDYL+NIWKV+NWKYAGE YE A
Sbjct: 181 KGANLVPLLGIDVWEHAYYLQYKNVRPDYLSNIWKVMNWKYAGEVYENATA 231
9634.m00431|protein superoxide dismutase (EC 1.15.1.1) (Fe) - rice
Length = 255
Score = 114 bits (283), Expect = 3e-25
Identities = 74/192 (38%), Positives = 104/192 (53%), Gaps = 9/192 (4%)
Frame = +3
Query: 117 VATFTLPDLPYDYGALEPAVSGEIMRLHHQKHHATYVANYNKALEQ-------LDAAVGK 275
VA + L PY ALEP +S + LH KH YV + NK L L+ + +
Sbjct: 40 VAYYALTTPPYKLDALEPYISKRTVELHWGKHQQDYVDSLNKQLATSMFYGYTLEELIKE 99
Query: 276 GDASGVVHLQSAIKFNGGGHV-NHSIFWKNLKPISEGGGEPPHGKLGWAIDEDFGSIEKL 452
+G ++N V NH FW++++P EGGG P G L I++DFGS
Sbjct: 100 AYNNG----NPLPEYNNAAQVWNHHFFWESMQP--EGGGSPGRGVLQ-QIEKDFGSFTNF 152
Query: 453 IKKMNAEGAALQGSGWVWLALDKEAKKLSVETTPNQDPLVTKGANLYPLLGIDVWEHAYY 632
++ +L GSGWVWL L ++ +K SV T N + G PL+ +D+WEHAYY
Sbjct: 153 REEFIRSALSLLGSGWVWLVLKRKERKFSVVHTQNAISPLALGD--IPLINLDLWEHAYY 210
Query: 633 LQYKNVRPDYLTN-IWKVVNW 692
L YK+ R Y+TN I +V+W
Sbjct: 211 LDYKDDRRMYVTNFIDHLVSW 231
9634.m00430|protein superoxide dismutase (EC 1.15.1.1) (Fe) - rice
Length = 255
Score = 114 bits (283), Expect = 3e-25
Identities = 74/192 (38%), Positives = 104/192 (53%), Gaps = 9/192 (4%)
Frame = +3
Query: 117 VATFTLPDLPYDYGALEPAVSGEIMRLHHQKHHATYVANYNKALEQ-------LDAAVGK 275
VA + L PY ALEP +S + LH KH YV + NK L L+ + +
Sbjct: 40 VAYYALTTPPYKLDALEPYISKRTVELHWGKHQQDYVDSLNKQLATSMFYGYTLEELIKE 99
Query: 276 GDASGVVHLQSAIKFNGGGHV-NHSIFWKNLKPISEGGGEPPHGKLGWAIDEDFGSIEKL 452
+G ++N V NH FW++++P EGGG P G L I++DFGS
Sbjct: 100 AYNNG----NPLPEYNNAAQVWNHHFFWESMQP--EGGGSPGRGVLQ-QIEKDFGSFTNF 152
Query: 453 IKKMNAEGAALQGSGWVWLALDKEAKKLSVETTPNQDPLVTKGANLYPLLGIDVWEHAYY 632
++ +L GSGWVWL L ++ +K SV T N + G PL+ +D+WEHAYY
Sbjct: 153 REEFIRSALSLLGSGWVWLVLKRKERKFSVVHTQNAISPLALGD--IPLINLDLWEHAYY 210
Query: 633 LQYKNVRPDYLTN-IWKVVNW 692
L YK+ R Y+TN I +V+W
Sbjct: 211 LDYKDDRRMYVTNFIDHLVSW 231
9634.m00154|protein Iron/manganese superoxide dismutases,
alpha-hairpin domain, putative
Length = 391
Score = 96.0 bits (235), Expect = 1e-19
Identities = 72/195 (36%), Positives = 110/195 (55%), Gaps = 31/195 (15%)
Frame = +3
Query: 141 LPYDYGALEPAVSGEIMRLHHQKHHATYVANYNKALEQLDAAVGKGDASGVVHLQSAIK- 317
LPY ALEP +S E + H H +V E+L+ +G + G+ Q +
Sbjct: 129 LPYPSDALEPYISKETVEQHWGVHQNIHV-------ERLNGMIGGSEWEGMSLGQMMLSS 181
Query: 318 FNGGGHV------------NHSIFWKNLKPISEGGGEPPHGKLGWAIDEDFGSIEKLIKK 461
FN G NH +W++++P GGG+PP L + I+ DFGS + +I++
Sbjct: 182 FNEGREAPHPPFFHAAQIWNHDFYWRSMQP--GGGGKPPERLLKF-INRDFGSYDGMIRQ 238
Query: 462 MNAEGAALQGSGWVWLALDKEAK----------------KLSVETTPNQ-DPLVTKGANL 590
+ GSGWVWL K +K +L + +PN +PLV +
Sbjct: 239 FMDAASTQFGSGWVWLCY-KTSKLPHVKSRSPIPSDNYGRLVISKSPNAINPLVWGHS-- 295
Query: 591 YPLLGIDVWEHAYYLQYKNVRPDYL-TNIWKVVNWKYAGEEYEKVL 725
PLL ID+WEHAYYL Y++ R DY+ T + K+V+W+ +K +
Sbjct: 296 -PLLAIDLWEHAYYLDYEDRRSDYVSTFLEKLVSWETVESRLKKAV 340
9634.m00155|protein Iron/manganese superoxide dismutases,
alpha-hairpin domain, putative
Length = 305
Score = 69.5 bits (167), Expect = 1e-11
Identities = 58/160 (36%), Positives = 87/160 (54%), Gaps = 30/160 (18%)
Frame = +3
Query: 141 LPYDYGALEPAVSGEIMRLHHQKHHATYVANYNKALEQLDAAVGKGDASGVVHLQSAIK- 317
LPY ALEP +S E + H H +V E+L+ +G + G+ Q +
Sbjct: 129 LPYPSDALEPYISKETVEQHWGVHQNIHV-------ERLNGMIGGSEWEGMSLGQMMLSS 181
Query: 318 FNGGGHV------------NHSIFWKNLKPISEGGGEPPHGKLGWAIDEDFGSIEKLIKK 461
FN G NH +W++++P GGG+PP L + I+ DFGS + +I++
Sbjct: 182 FNEGREAPHPPFFHAAQIWNHDFYWRSMQP--GGGGKPPERLLKF-INRDFGSYDGMIRQ 238
Query: 462 MNAEGAALQGSGWVWLALDKEAK----------------KLSVETTPNQ-DPLVTKGANL 590
+ GSGWVWL K +K +L + +PN +PLV +
Sbjct: 239 FMDAASTQFGSGWVWLCY-KTSKLPHVKSRSPIPSDNYGRLVISKSPNAINPLVWGHS-- 295
Query: 591 YPLLGIDVWE 620
PLL ID+WE
Sbjct: 296 -PLLAIDLWE 304
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75760850
Number of Sequences: 59712
Number of extensions: 2254527
Number of successful extensions: 23397
Number of sequences better than 1.0e-10: 10
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 23383
Number of HSP's gapped (non-prelim): 5
length of query: 382
length of database: 26,991,925
effective HSP length: 51
effective length of query: 331
effective length of database: 23,946,613
effective search space: 7926328903
effective search space used: 7926328903
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG383 Members:160 3pri:Y 5e-52
Q40070 Photosystem II 10 kDa polypeptide, chloroplast
precursor pir||T06173 photosystem II 10K protein precursor - ba
(2260 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m00830|protein expressed protein 318 2e-86
9635.m00472|protein hypothetical protein 233 1e-60
9636.m00961|protein photosystem II 10K protein - rice 157 9e-38
9631.m00830|protein expressed protein
Length = 1178
Score = 318 bits (807), Expect = 2e-86
Identities = 169/244 (69%), Positives = 195/244 (79%), Gaps = 1/244 (0%)
Frame = -1
Query: 733 VKNVADYQSSGRYLLKPELEVENSNHASGSGRTIDENIEEIAPSLRIDDPDIFEKIEIGG 554
+KN+A +Q+ GRYLLKP LE E+S R+ID+N EE PSL++DDPDIFE+I+IGG
Sbjct: 335 IKNIAIFQAPGRYLLKPGLEAESSK------RSIDDNTEEAGPSLKMDDPDIFERIDIGG 388
Query: 553 SPVSAAGDEKVH-DSDAKAGTSSESGSDSDSDSDSSGSGSDSGSQSRSAGSGSGSSSDSD 377
SPVSAA DEKV+ DSD KAG+SSESGS SDSDS+SS SGSDSGSQSRSA SGSGSSSDSD
Sbjct: 389 SPVSAARDEKVNNDSDGKAGSSSESGSGSDSDSESSDSGSDSGSQSRSAASGSGSSSDSD 448
Query: 376 SDASSSSKEGSDAFVDITSDDNKPDTACRKVADELKLSSSPVDFPAFDGDDEQIDIGTNL 197
SDASSSSKEGSDAFVDITSDD+K A RK ADELKLSS P D A DGDDE IDIGTNL
Sbjct: 449 SDASSSSKEGSDAFVDITSDDDKGG-AHRKAADELKLSSLPRDLTALDGDDELIDIGTNL 507
Query: 196 DYKSASSHIDLNNLNVDNDEPAYAGTATEKFGASNVDMPSEFPGRENMVSTRLDQSIVDG 17
DYKSAS HIDLNN N +N+E AY T+ F AS+++ P E PG +NMV+T +D S +D
Sbjct: 508 DYKSASPHIDLNNFNDNNNESAYTAVPTDSFDASHLEKPPEIPGSKNMVNTSIDPSRIDS 567
Query: 16 KYPAS 2
KY A+
Sbjct: 568 KYAAN 572
9635.m00472|protein hypothetical protein
Length = 137
Score = 233 bits (588), Expect = 1e-60
Identities = 112/137 (81%), Positives = 126/137 (91%)
Frame = +2
Query: 791 MSACVMASLALKPSSSPLLQRSKLGGVRPSARPSLVIVAKKAKKVQTAQPYGPGGGVAFK 970
M+A VMASLALKPS+SPLL+RSKL G ARPSL+IVAKKAKK+QT+QPYGP GGV FK
Sbjct: 1 MAASVMASLALKPSASPLLERSKLRGKGTMARPSLIIVAKKAKKIQTSQPYGPAGGVVFK 60
Query: 971 EGVDASGRVAKGKGVYQFADKYGANVDGYSPIYTPEEWSPSGDVYVGGKTGLFLWAVTLA 1150
EGVDASGRVAKGKG+YQF++KYGANVDGYSPIYTPEEWS +GDVYVGGK GL LWA+TLA
Sbjct: 61 EGVDASGRVAKGKGLYQFSNKYGANVDGYSPIYTPEEWSSTGDVYVGGKAGLLLWAITLA 120
Query: 1151 GILLGGALLVYSTSALA 1201
GIL+GGA+LVY+TSALA
Sbjct: 121 GILVGGAILVYNTSALA 137
9636.m00961|protein photosystem II 10K protein - rice
Length = 130
Score = 157 bits (392), Expect = 9e-38
Identities = 79/129 (61%), Positives = 98/129 (75%), Gaps = 2/129 (1%)
Frame = +2
Query: 815 LALKPSSSPLLQRSKLGGVRPSAR--PSLVIVAKKAKKVQTAQPYGPGGGVAFKEGVDAS 988
+A +SPL+ ++ G+ +R S IV KK++T +PYG GGG++ +DAS
Sbjct: 1 MATSMITSPLVAPARAKGLPSISRRGSSFAIVCSGGKKIKTDKPYGIGGGMSVD--IDAS 58
Query: 989 GRVAKGKGVYQFADKYGANVDGYSPIYTPEEWSPSGDVYVGGKTGLFLWAVTLAGILLGG 1168
GR + GKGVYQF DKYGANVDGYSPIY+PEEWSP+GD YVGG TGL +WAVTLAG+L GG
Sbjct: 59 GRKSTGKGVYQFVDKYGANVDGYSPIYSPEEWSPTGDTYVGGTTGLLIWAVTLAGLLGGG 118
Query: 1169 ALLVYSTSALA 1201
ALLVY+TSALA
Sbjct: 119 ALLVYNTSALA 129
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120873292
Number of Sequences: 59712
Number of extensions: 3065500
Number of successful extensions: 18789
Number of sequences better than 1.0e-10: 6
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 18757
Number of HSP's gapped (non-prelim): 5
length of query: 753
length of database: 26,991,925
effective HSP length: 53
effective length of query: 699
effective length of database: 23,827,189
effective search space: 16655205111
effective search space used: 16655205111
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 162 (67.5 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG388 Members:22 3pri:Y 1e-116
CAD29296.1 plasma membrane H+ ATPase [Oryza sativa (japonica
cultivar-group)]
(2665 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9640.m04351|protein plasma-membrane proton-efflux P-type ... 1414 0.0
9631.m04701|protein plasma-membrane proton-efflux P-type ... 1366 0.0
9635.m00896|protein plasma-membrane proton-efflux P-type ... 1323 0.0
9632.m05471|protein plasma-membrane proton-efflux P-type ... 1206 0.0
9631.m00012|protein plasma-membrane proton-efflux P-type ... 1165 0.0
9630.m05505|protein plasma-membrane proton-efflux P-type ... 1148 0.0
9633.m02301|protein plasma-membrane proton-efflux P-type ... 1131 0.0
9636.m01434|protein plasma-membrane proton-efflux P-type ... 1104 0.0
9634.m00768|protein plasma-membrane proton-efflux P-type ... 1009 0.0
9634.m00767|protein plasma-membrane proton-efflux P-type ... 1009 0.0
9631.m00801|protein plasma-membrane proton-efflux P-type ... 972 0.0
9639.m02667|protein E1-E2 ATPase, putative 295 3e-79
9639.m02689|protein E1-E2 ATPase, putative 259 2e-68
9629.m07280|protein hypothetical protein 208 5e-53
9640.m00336|protein calcium-translocating P-type ATPase, ... 145 4e-34
9632.m04989|protein calcium-translocating P-type ATPase, ... 143 2e-33
9632.m04988|protein calcium-translocating P-type ATPase, ... 143 2e-33
9633.m03896|protein calcium-translocating P-type ATPase, ... 142 2e-33
9630.m00757|protein calcium-translocating P-type ATPase, ... 133 1e-30
9631.m00071|protein E1-E2 ATPase, putative 130 1e-29
9640.m04351|protein plasma-membrane proton-efflux P-type ATPase
Length = 956
Score = 1414 bits (3619), Expect(2) = 0.0
Identities = 703/737 (95%), Positives = 721/737 (97%)
Frame = +3
Query: 36 YTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMYPIQHRAYRPGIDN 215
+TFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMF+EIIVMYPIQHRAYRPGIDN
Sbjct: 221 HTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMFVEIIVMYPIQHRAYRPGIDN 280
Query: 216 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 395
LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL
Sbjct: 281 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 340
Query: 396 NKLTVDKSLVEVFERGITQDQVILMAARASRTENQDAIDTAIVGMLADPKEARAGIQEVH 575
NKLTVDK+L++VFERGITQDQVILMAARASRTENQDAIDTAIVGMLADPKEARAGIQEVH
Sbjct: 341 NKLTVDKNLIDVFERGITQDQVILMAARASRTENQDAIDTAIVGMLADPKEARAGIQEVH 400
Query: 576 FLPFNPTDKRTALTYIDADGKMHRVSKGAPEQILHLAHNTSEIERRVHAVIDKFAERGLR 755
FLPFNPTDKRTALTYID DGKM+RVSKGAPEQILHLAHN EIERRVHAVIDKFAERGLR
Sbjct: 401 FLPFNPTDKRTALTYIDGDGKMYRVSKGAPEQILHLAHNKPEIERRVHAVIDKFAERGLR 460
Query: 756 SLAVAYQEVPDGRKESPGGPWHFAGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 935
SLAVAYQEVP+G KESPGGPWHF GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA
Sbjct: 461 SLAVAYQEVPEGTKESPGGPWHFVGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 520
Query: 936 IGKETGRRLGMGTNMYPSSALLGQKNSDESISALPVDDLIEKADGFAGVFPEHKYEIVKR 1115
IGKETGRRLGMGTNMYPSSALLGQ N DESI+ALPVDDLIEKADGFAGVFPEHKYEIVKR
Sbjct: 521 IGKETGRRLGMGTNMYPSSALLGQ-NKDESIAALPVDDLIEKADGFAGVFPEHKYEIVKR 579
Query: 1116 LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 1295
LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS
Sbjct: 580 LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639
Query: 1296 RAIFQRMKNYTIYAVSITIRIVLGFMLLALIWNFDFPPFMVLIIAILNDGTIMTISKDRV 1475
RAIFQRMKNYTIYAVSITIRIVLGFMLLALIW FDFPPFMVLIIAILNDGTIMTISKDRV
Sbjct: 640 RAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRV 699
Query: 1476 KPSPLPDSWKLAEIFTTGVILGGYLAIMTVIFFWAAYKTNFFPRLFHVESLEKTAQDDFQ 1655
KPSPLPDSWKLAEIFTTGV+LGGYLA+MTVIFFWAAYKT+FFPR+FHVESLEKTAQDDFQ
Sbjct: 700 KPSPLPDSWKLAEIFTTGVVLGGYLAMMTVIFFWAAYKTDFFPRIFHVESLEKTAQDDFQ 759
Query: 1656 KLASAIYLQVSTISQALIFVTRSRSWSFAERPGFLLVFAFFVAQLIATLIAVYADWKFAA 1835
KLASA+YLQVSTISQALIFVTRSRSWSF ERPGFLLVFAF VAQLIATLIAVYADW F +
Sbjct: 760 KLASAVYLQVSTISQALIFVTRSRSWSFVERPGFLLVFAFLVAQLIATLIAVYADWAFTS 819
Query: 1836 IKGIGWGWAGVVWLYNIITYFPLDIIKFLIRYTLSGKAWDLVIDQRIAFTRKKDFGKEER 2015
IKGIGWGWAG+VWLYN+I YFPLDIIKFLIRY LSGKAWDLVI+QRIAFTRKKDFGKEER
Sbjct: 820 IKGIGWGWAGIVWLYNLIFYFPLDIIKFLIRYALSGKAWDLVIEQRIAFTRKKDFGKEER 879
Query: 2016 ELKWAHAQRTLHGLQPPDAKMFSDKGGYNELNHMAEEAKRRAEIARLRELHTLKGHVESV 2195
ELKWAHAQRTLHGLQPPDAKMFS+K GYNELN MAEEAKRRAEIARLRELHTLKGHVESV
Sbjct: 880 ELKWAHAQRTLHGLQPPDAKMFSEKAGYNELNQMAEEAKRRAEIARLRELHTLKGHVESV 939
Query: 2196 VKLKGLDIETIQQSYTV 2246
VKLKGLDIETIQQSYTV
Sbjct: 940 VKLKGLDIETIQQSYTV 956
Score = 25.4 bits (54), Expect(2) = 0.0
Identities = 11/12 (91%), Positives = 12/12 (99%)
Frame = +1
Query: 1 GEIEAVVIATGV 36
GEIEA+VIATGV
Sbjct: 209 GEIEAIVIATGV 220
9631.m04701|protein plasma-membrane proton-efflux P-type ATPase
Length = 1000
Score = 1366 bits (3497), Expect(2) = 0.0
Identities = 688/737 (93%), Positives = 716/737 (96%), Gaps = 39/737 (5%)
Frame = +3
Query: 36 YTFFGKAAHLVDSTNQVGHFQK----------VLTAIGNFCICSIAVGMFIEIIVMYPIQ 185
+TFFGKAAHLVDSTNQVGHFQK VLTAIGNFCICSIAVGMF+EIIVMYPIQ
Sbjct: 226 HTFFGKAAHLVDSTNQVGHFQKARLRSLTSVHVLTAIGNFCICSIAVGMFVEIIVMYPIQ 285
Query: 186 HRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 365
HR YRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL
Sbjct: 286 HRPYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 345
Query: 366 CSDKTGTLTLNKLTVDKSLVEVFERGITQDQVILMAARASRTENQDAIDTAIVGMLADPK 545
CSDKTGTLTLNKLTVDK+L+E+FERG+TQDQVILMAARASRTENQDAIDTAIVGMLADPK
Sbjct: 346 CSDKTGTLTLNKLTVDKNLIEIFERGVTQDQVILMAARASRTENQDAIDTAIVGMLADPK 405
Query: 546 EARAGIQEVHFLPFNPTDKRTALTYIDADGKMHRVSKGAPEQILHLAHNTSEIERRVHAV 725
EARAGIQEVHFLPFNPTDKRTALTYID+DGKM+RVSKGAPEQIL+LAHN ++IERRVHAV
Sbjct: 406 EARAGIQEVHFLPFNPTDKRTALTYIDSDGKMYRVSKGAPEQILNLAHNKTQIERRVHAV 465
Query: 726 IDKFAERGLRSLAVAYQEVPDGRKESPGGPWHFAGLMPLFDPPRHDSAETIRRALNLGVN 905
IDKFAERGLRSLAVAYQEVPDGRKESPGGPW F L+PLFDPPRHDSAETIRRALNLGVN
Sbjct: 466 IDKFAERGLRSLAVAYQEVPDGRKESPGGPWRFVALLPLFDPPRHDSAETIRRALNLGVN 525
Query: 906 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQKNSDESISALPVDDLIEKADGFAGVF 1085
VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ N DES++ALPVDDLIEKADGFAGVF
Sbjct: 526 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ-NKDESVAALPVDDLIEKADGFAGVF 584
Query: 1086 P-----------------------------EHKYEIVKRLQARKHICGMTGDGVNDAPAL 1178
P EHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 585 PGLYAINCRIKTKWLKVTKKNITVKFSLFSEHKYEIVKRLQARKHICGMTGDGVNDAPAL 644
Query: 1179 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 1358
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 645 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 704
Query: 1359 VLGFMLLALIWNFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 1538
V GFMLLALIW FDFPPFMVLIIAILNDGTIMTISKD VKPSPLPDSWKLAEIFTTGV+L
Sbjct: 705 VFGFMLLALIWEFDFPPFMVLIIAILNDGTIMTISKDLVKPSPLPDSWKLAEIFTTGVVL 764
Query: 1539 GGYLAIMTVIFFWAAYKTNFFPRLFHVESLEKTAQDDFQKLASAIYLQVSTISQALIFVT 1718
GGYLA+MTVIFFWAAYKTNFFPR+FHVESLEKTAQDD+QKLASA+YLQVSTISQALIFVT
Sbjct: 765 GGYLAMMTVIFFWAAYKTNFFPRIFHVESLEKTAQDDYQKLASAVYLQVSTISQALIFVT 824
Query: 1719 RSRSWSFAERPGFLLVFAFFVAQLIATLIAVYADWKFAAIKGIGWGWAGVVWLYNIITYF 1898
RSRSWSF ERPGFLLVFAFFVAQLIATLIAVYA+W F +IKGIGWGWAG+VWLYN++ YF
Sbjct: 825 RSRSWSFIERPGFLLVFAFFVAQLIATLIAVYANWAFTSIKGIGWGWAGIVWLYNLVFYF 884
Query: 1899 PLDIIKFLIRYTLSGKAWDLVIDQRIAFTRKKDFGKEERELKWAHAQRTLHGLQPPDAKM 2078
PLDIIKFLIRY LSGKAWDLVI+QRIAFTRKKDFGKEERELKWAHA RTLHGLQPPDAK
Sbjct: 885 PLDIIKFLIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAHRTLHGLQPPDAKP 944
Query: 2079 FSDKGGYNELNHMAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQSYTV 2246
F +K GY+ELN MAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDI+TI QSYTV
Sbjct: 945 FPEKTGYSELNQMAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIDTIHQSYTV 1000
Score = 25.8 bits (55), Expect(2) = 0.0
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 1 GEIEAVVIATGV 36
GEIEAVVIATGV
Sbjct: 214 GEIEAVVIATGV 225
9635.m00896|protein plasma-membrane proton-efflux P-type ATPase
Length = 957
Score = 1323 bits (3387), Expect(2) = 0.0
Identities = 659/737 (89%), Positives = 696/737 (94%), Gaps = 1/737 (0%)
Frame = +3
Query: 36 YTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMYPIQHRAYRPGIDN 215
+TFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIA+GM +EIIVMYPIQHR YRPGIDN
Sbjct: 221 HTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVVEIIVMYPIQHRDYRPGIDN 280
Query: 216 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 395
LLVLLIGGIPIAMPTVLSVTMAIGSHRL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTL
Sbjct: 281 LLVLLIGGIPIAMPTVLSVTMAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 340
Query: 396 NKLTVDKSLVEVFERGITQDQVILMAARASRTENQDAIDTAIVGMLADPKEARAGIQEVH 575
NKLTVDKSL+EVF+RG+ QD VILMAARASRTENQDAID IVGMLADPKEARAGIQEVH
Sbjct: 341 NKLTVDKSLIEVFQRGVDQDTVILMAARASRTENQDAIDATIVGMLADPKEARAGIQEVH 400
Query: 576 FLPFNPTDKRTALTYIDADGKMHRVSKGAPEQILHLAHNTSEIERRVHAVIDKFAERGLR 755
FLPFNPTDKRTALTYID +GKMHRVSKGAPEQIL+LAHN +EIERRV AVIDKFAERGLR
Sbjct: 401 FLPFNPTDKRTALTYIDGEGKMHRVSKGAPEQILNLAHNKTEIERRVRAVIDKFAERGLR 460
Query: 756 SLAVAYQEVPDGRKESPGGPWHFAGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 935
SL VAYQ+VPDGRKESPGGPW F GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLA
Sbjct: 461 SLGVAYQQVPDGRKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 520
Query: 936 IGKETGRRLGMGTNMYPSSALLGQKNSDESISALPVDDLIEKADGFAGVFPEHKYEIVKR 1115
IGKET RRLGMGTNMYPSSALLGQ + DESI ALPVD+LIEKADGFAGVFPEHKYEIVKR
Sbjct: 521 IGKETARRLGMGTNMYPSSALLGQ-DKDESIVALPVDELIEKADGFAGVFPEHKYEIVKR 579
Query: 1116 LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 1295
LQARKHICGMTGDGVNDAPALKKADIGIAV D+TDAARSASDIVLTEPGLSVIISAVLTS
Sbjct: 580 LQARKHICGMTGDGVNDAPALKKADIGIAVDDSTDAARSASDIVLTEPGLSVIISAVLTS 639
Query: 1296 RAIFQRMKNYTIYAVSITIRIVLGFMLLALIWNFDFPPFMVLIIAILNDGTIMTISKDRV 1475
RAIFQRMKNYTIYAVSITIRIVLGFMLLALIW FDFPPFMVLIIAILNDGTIMTISKDRV
Sbjct: 640 RAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRV 699
Query: 1476 KPSPLPDSWKLAEIFTTGVILGGYLAIMTVIFFWAAYKTNFFPRLFHVESLEKTAQDDFQ 1655
KPSP PDSWKL+EIF TGV+LG YLA+MTVIFFW AYKT+FFPR+FHVESLEKTAQDDFQ
Sbjct: 700 KPSPQPDSWKLSEIFATGVVLGSYLAMMTVIFFWVAYKTDFFPRVFHVESLEKTAQDDFQ 759
Query: 1656 KLASAIYLQVSTISQALIFVTRSRSWSFAERPGFLLVFAFFVAQLIATLIAVYADWKFAA 1835
KLASA+YLQVSTISQALIFVTRSRSWSF ERPGFLLVFAFFVAQLIATLIAVYA+W FA+
Sbjct: 760 KLASAVYLQVSTISQALIFVTRSRSWSFVERPGFLLVFAFFVAQLIATLIAVYANWGFAS 819
Query: 1836 IKGIGWGWAGVVWLYNIITYFPLDIIKFLIRYTLSGKAWDLVIDQRIAFTRKKDFGKEER 2015
IKGIGWGWAGV+WLYNI+ Y PLDIIKFLIRY LSG+AWDLV++QRIAFTRKKDFG +E
Sbjct: 820 IKGIGWGWAGVIWLYNIVFYLPLDIIKFLIRYALSGRAWDLVLEQRIAFTRKKDFGTQEN 879
Query: 2016 ELKWAHAQRTLHGLQP-PDAKMFSDKGGYNELNHMAEEAKRRAEIARLRELHTLKGHVES 2192
+LKWA AQRT+HGLQP A +F D YN+LN +AEEA+RRAEIARLREL TLKG +ES
Sbjct: 880 QLKWATAQRTIHGLQPAATAAVFRDMTSYNDLNQLAEEARRRAEIARLRELTTLKGRMES 939
Query: 2193 VVKLKGLDIETIQQSYTV 2246
VVK KGLD+ETIQQSYTV
Sbjct: 940 VVKQKGLDLETIQQSYTV 957
Score = 25.8 bits (55), Expect(2) = 0.0
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 1 GEIEAVVIATGV 36
GEIEAVVIATGV
Sbjct: 209 GEIEAVVIATGV 220
9632.m05471|protein plasma-membrane proton-efflux P-type ATPase
Length = 951
Score = 1206 bits (3086), Expect(2) = 0.0
Identities = 599/737 (81%), Positives = 665/737 (89%), Gaps = 3/737 (0%)
Frame = +3
Query: 36 YTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMYPIQHRAYRPGIDN 215
+TFFGKAAHLVDSTNQVGHFQ VLTAIGNFCICSIAVG+ IEIIVM+PIQHRAYR GI+N
Sbjct: 217 HTFFGKAAHLVDSTNQVGHFQTVLTAIGNFCICSIAVGIVIEIIVMFPIQHRAYRSGIEN 276
Query: 216 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 395
LLVLLIGGIPIAMPTVLSVTMAIGSH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL
Sbjct: 277 LLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 336
Query: 396 NKLTVDKSLVEVFERGITQDQVILMAARASRTENQDAIDTAIVGMLADPKEARAGIQEVH 575
NKL+VDK+LVEVF +G+ +D V+L+AARASRTENQDAID A+VGMLADPKEARAGI+EVH
Sbjct: 337 NKLSVDKNLVEVFTKGVDKDHVLLLAARASRTENQDAIDAAMVGMLADPKEARAGIREVH 396
Query: 576 FLPFNPTDKRTALTYIDADGKMHRVSKGAPEQILHLAHNTSEIERRVHAVIDKFAERGLR 755
FLPFNP DKRTALTYIDADG HR SKGAPEQIL L + +++R+VHAVIDK+AERGLR
Sbjct: 397 FLPFNPVDKRTALTYIDADGNWHRASKGAPEQILTLCNCKEDVKRKVHAVIDKYAERGLR 456
Query: 756 SLAVAYQEVPDGRKESPGGPWHFAGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 935
SLAVA QEVP+ KES GGPW F GL+PLFDPPRHDSAETIR+AL+LGVNVKMITGDQLA
Sbjct: 457 SLAVARQEVPEKSKESAGGPWQFVGLLPLFDPPRHDSAETIRKALHLGVNVKMITGDQLA 516
Query: 936 IGKETGRRLGMGTNMYPSSALLGQKNSDESISALPVDDLIEKADGFAGVFPEHKYEIVKR 1115
IGKETGRRLGMGTNMYPSSALLGQ N D S+ ALPVD+LIEKADGFAGVFPEHKYEIVKR
Sbjct: 517 IGKETGRRLGMGTNMYPSSALLGQ-NKDASLEALPVDELIEKADGFAGVFPEHKYEIVKR 575
Query: 1116 LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 1295
LQ +KHI GMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS
Sbjct: 576 LQEKKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 635
Query: 1296 RAIFQRMKNYTIYAVSITIRIVLGFMLLALIWNFDFPPFMVLIIAILNDGTIMTISKDRV 1475
R IFQRMKNYTIYAVSITIRIVLGF+L+ALIW +DF PFMVLIIAILNDGTIMTISKDRV
Sbjct: 636 RCIFQRMKNYTIYAVSITIRIVLGFLLIALIWKYDFSPFMVLIIAILNDGTIMTISKDRV 695
Query: 1476 KPSPLPDSWKLAEIFTTGVILGGYLAIMTVIFFWAAYKTNFFPRLFHVESLEKTAQDDFQ 1655
KPSPLPDSWKL EIF TG++LG YLA+MTVIFFWA +KT+FF F V S+ + +
Sbjct: 696 KPSPLPDSWKLKEIFATGIVLGSYLALMTVIFFWAMHKTDFFTDKFGVRSIRNSEHE--- 752
Query: 1656 KLASAIYLQVSTISQALIFVTRSRSWSFAERPGFLLVFAFFVAQLIATLIAVYADWKFAA 1835
+ SA+YLQVS +SQALIFVTRSRSWSF ERPG LLV AF +AQL+AT +AVYA+W FA
Sbjct: 753 -MMSALYLQVSIVSQALIFVTRSRSWSFIERPGLLLVTAFMLAQLVATFLAVYANWGFAR 811
Query: 1836 IKGIGWGWAGVVWLYNIITYFPLDIIKFLIRYTLSGKAWDLVIDQRIAFTRKKDFGKEER 2015
IKGIGWGWAGV+WLY+I+ YFPLDI KF IR+ LSG+AWD +++ +IAFT KKD+G+EER
Sbjct: 812 IKGIGWGWAGVIWLYSIVFYFPLDIFKFFIRFVLSGRAWDNLLENKIAFTTKKDYGREER 871
Query: 2016 ELKWAHAQRTLHGLQPPDA---KMFSDKGGYNELNHMAEEAKRRAEIARLRELHTLKGHV 2186
E +WA AQRTLHGLQPP+ +F+DK Y EL+ +AE+AKRRAEIARLREL+TLKGHV
Sbjct: 872 EAQWATAQRTLHGLQPPEVASNTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHV 931
Query: 2187 ESVVKLKGLDIETIQQSYTV 2246
ESVVKLKGLDI+TIQQ+YTV
Sbjct: 932 ESVVKLKGLDIDTIQQNYTV 951
Score = 25.8 bits (55), Expect(2) = 0.0
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 1 GEIEAVVIATGV 36
GEIEAVVIATGV
Sbjct: 205 GEIEAVVIATGV 216
9631.m00012|protein plasma-membrane proton-efflux P-type ATPase
Length = 970
Score = 1165 bits (2980), Expect(2) = 0.0
Identities = 581/737 (78%), Positives = 649/737 (87%), Gaps = 10/737 (1%)
Frame = +3
Query: 36 YTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMFIEIIVMYPIQHRAYRPGIDN 215
+TFFGKAAHLV+ST VGHFQKVLT+IGNFCICSIA GM IE++VMY + R YR +DN
Sbjct: 228 HTFFGKAAHLVESTTHVGHFQKVLTSIGNFCICSIAAGMVIELLVMYAVHERKYRQIVDN 287
Query: 216 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 395
LLVLLIGGIPIAMPTVLSVTMAIGSH+L+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTL
Sbjct: 288 LLVLLIGGIPIAMPTVLSVTMAIGSHKLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 347
Query: 396 NKLTVDKSLVEVFERGITQDQVILMAARASRTENQDAIDTAIVGMLADPKEARAGIQEVH 575
NKL+VDK+L+EVFE+GI +D V+LMAARASR ENQDAID AIV ML DPKEARAGIQEVH
Sbjct: 348 NKLSVDKNLIEVFEKGIEKDDVVLMAARASRLENQDAIDFAIVSMLPDPKEARAGIQEVH 407
Query: 576 FLPFNPTDKRTALTYIDADGKMHRVSKGAPEQILHLAHNTSEIERRVHAVIDKFAERGLR 755
FLPFNPTDKRTALTY+DA+GKMHRVSKGAPEQIL+LA N EIER+VH VI FAERGLR
Sbjct: 408 FLPFNPTDKRTALTYLDAEGKMHRVSKGAPEQILNLASNKCEIERKVHHVIGNFAERGLR 467
Query: 756 SLAVAYQEVPDGRKESPGGPWHFAGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 935
SLAVAYQEVP+G KESPGGPW F GL+PLFDPPRHDSAETIRRAL+LGV+VKMITGDQLA
Sbjct: 468 SLAVAYQEVPEGTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLA 527
Query: 936 IGKETGRRLGMGTNMYPSSALLGQKNSDESISALPVDDLIEKADGFAGVFPEHKYEIVKR 1115
IGKETGRRLGMGTNMYPSS+LLG + D I+ LPVD+LIE+ADGFAGVFPEHKYEIV+R
Sbjct: 528 IGKETGRRLGMGTNMYPSSSLLGDR-KDGDIAVLPVDELIEQADGFAGVFPEHKYEIVQR 586
Query: 1116 LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 1295
LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS
Sbjct: 587 LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 646
Query: 1296 RAIFQRMKNYTIYAVSITIRIVLGFMLLALIWNFDFPPFMVLIIAILNDGTIMTISKDRV 1475
RAIFQRMKNYTIYAVSIT+RIVLGF+LLA W FDFPPF+VL+IAILNDGTIMTISKD+V
Sbjct: 647 RAIFQRMKNYTIYAVSITVRIVLGFLLLACFWKFDFPPFLVLVIAILNDGTIMTISKDKV 706
Query: 1476 KPSPLPDSWKLAEIFTTGVILGGYLAIMTVIFFWAAYKTNFFPRLFHVESLEKTAQD--- 1646
KPSP PDSWKL EIF TGVI+G YLA+ TV+FFWAAYKT FF LF+V++L D
Sbjct: 707 KPSPYPDSWKLTEIFATGVIIGAYLAVTTVLFFWAAYKTQFFVHLFNVDTLNINKVDTTD 766
Query: 1647 ------DFQKLASAIYLQVSTISQALIFVTRSRSWSFAERPGFLLVFAFFVAQLIATLIA 1808
+ +KLASA+YLQVSTISQALIFVTRSR WSF ERPG LL+ AF +AQLIAT++A
Sbjct: 767 NELVARNTEKLASAVYLQVSTISQALIFVTRSRGWSFLERPGLLLMAAFVIAQLIATVLA 826
Query: 1809 VYADWKFAAIKGIGWGWAGVVWLYNIITYFPLDIIKFLIRYTLSGKAWDLVIDQRIAFTR 1988
A W+ A+I+GIGW WAG +W+YNI+ Y LD +KF +RY LSGKAW+LVID ++AFT
Sbjct: 827 AIATWEVASIRGIGWRWAGAIWVYNIVVYLLLDPMKFAVRYGLSGKAWNLVIDNKVAFTN 886
Query: 1989 KKDFGKEERELKWAHAQRTLHGLQPPDAKMFSDKGGYNELNHMAEEAKRRAEIARLRELH 2168
+KDFG+E R + WAH QRTLHGLQ ++ +K ELN MAEEA+RRAEI RLRELH
Sbjct: 887 RKDFGREARVVAWAHEQRTLHGLQSAASR---EKAASTELNQMAEEARRRAEITRLRELH 943
Query: 2169 TLKGHVESVVKLKGLDIETI-QQSYTV 2246
TLKG VESV KLKG+D+E + Q YTV
Sbjct: 944 TLKGKVESVAKLKGIDLEDVNNQHYTV 970
Score = 25.4 bits (54), Expect(2) = 0.0
Identities = 11/12 (91%), Positives = 12/12 (99%)
Frame = +1
Query: 1 GEIEAVVIATGV 36
GEIEAVVIATG+
Sbjct: 216 GEIEAVVIATGI 227
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 160749966
Number of Sequences: 59712
Number of extensions: 4288822
Number of successful extensions: 15958
Number of sequences better than 1.0e-10: 53
Number of HSP's better than 0.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 15827
Number of HSP's gapped (non-prelim): 79
length of query: 888
length of database: 26,991,925
effective HSP length: 54
effective length of query: 833
effective length of database: 23,767,477
effective search space: 19798308341
effective search space used: 19798308341
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 162 (67.5 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG410 Members:45 3pri:Y 1e-113
P17784 Fructose-bisphosphate aldolase, cytoplasmic isozyme
pir||ADRZY fructose-bisphosphate aldolase (EC 4.1.2.13), c
(1799 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9633.m03072|protein Fructose-bisphosphate aldolase class-I 675 0.0
9629.m06736|protein Fructose-bisphosphate aldolase class-I 651 0.0
9636.m00174|protein Fructose-bisphosphate aldolase class-I 568 e-161
9634.m03902|protein Fructose-bisphosphate aldolase class-I 547 e-155
9639.m00637|protein Fructose-bisphosphate aldolase class-I 383 e-106
9629.m00200|protein Fructose-bisphosphate aldolase class-... 350 4e-96
9639.m00638|protein Fructose-bisphosphate aldolase class-I 336 8e-92
9640.m00648|protein Fructose-bisphosphate aldolase class-I 156 1e-37
9637.m00098|protein Similar to aldolase 108 4e-23
9633.m03072|protein Fructose-bisphosphate aldolase class-I
Length = 358
Score = 675 bits (1722), Expect = 0.0
Identities = 332/358 (92%), Positives = 344/358 (95%)
Frame = +2
Query: 446 MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEDNRRALRELLF 625
MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVE+NRR+LRELLF
Sbjct: 1 MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLF 60
Query: 626 CTPGALQYLSGVILFEETLYQSTKGGKPFVDILKEGNVLPGIKVDKGTVELAGTNGETTT 805
CTPGALQYLSGVILFEETLYQ TK GKPFVD+LKEG VLPGIKVDKGT+E+AGT ETTT
Sbjct: 61 CTPGALQYLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTIEVAGTEKETTT 120
Query: 806 QGFDDLGKRCAKYYEAGARFAKWRAVLKIGPTEPSQLSINQNAQGLARYAIICQENGLVP 985
QG DDLGKRCAKYYEAGARFAKWRAVLKIGP EPSQL+I+ NAQGLARYAIICQENGLVP
Sbjct: 121 QGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLAIDLNAQGLARYAIICQENGLVP 180
Query: 986 IVEPEILVDGPHDIDRCAYVTEMVLAACYKALNDQHVLLEGTLLKPNMVTPGSDAKKVTP 1165
IVEPEILVDGPHDIDRCAYV+E+VLAACYKALN+ HVLLEGTLLKPNMVTPGSDAKKV+P
Sbjct: 181 IVEPEILVDGPHDIDRCAYVSEVVLAACYKALNEHHVLLEGTLLKPNMVTPGSDAKKVSP 240
Query: 1166 EVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLQTKKPWNLSFSFGRAL 1345
EVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKL TKKPW+LSFSFGRAL
Sbjct: 241 EVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLSTKKPWSLSFSFGRAL 300
Query: 1346 QQSTLKAWSGKAENEEKARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 1519
QQSTLKAWSGKAEN EKAR AFL RCKANSEATLGTYKGDA LGEGASESLHVKDYKY
Sbjct: 301 QQSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358
9629.m06736|protein Fructose-bisphosphate aldolase class-I
Length = 358
Score = 651 bits (1661), Expect = 0.0
Identities = 320/358 (89%), Positives = 338/358 (94%)
Frame = +2
Query: 446 MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEDNRRALRELLF 625
MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVE+NRR+LRELLF
Sbjct: 1 MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLF 60
Query: 626 CTPGALQYLSGVILFEETLYQSTKGGKPFVDILKEGNVLPGIKVDKGTVELAGTNGETTT 805
TPGALQ+LSGVILFEETLYQ TK GKPFVD+LKEG VLPGIKVDKGTVE+AGTN ETTT
Sbjct: 61 TTPGALQHLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTVEVAGTNKETTT 120
Query: 806 QGFDDLGKRCAKYYEAGARFAKWRAVLKIGPTEPSQLSINQNAQGLARYAIICQENGLVP 985
QG DDLGKRCAKYYEAGARFAKWRAVLKIGP EPSQLSI+ NAQGLARYAIICQENGLVP
Sbjct: 121 QGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLSIDLNAQGLARYAIICQENGLVP 180
Query: 986 IVEPEILVDGPHDIDRCAYVTEMVLAACYKALNDQHVLLEGTLLKPNMVTPGSDAKKVTP 1165
IVEPEILVDG HDI+RCAYVTE VLAACYKALN+ HVLLEG+LLKPNMVTPGS++KKV+P
Sbjct: 181 IVEPEILVDGSHDIERCAYVTEKVLAACYKALNEHHVLLEGSLLKPNMVTPGSESKKVSP 240
Query: 1166 EVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLQTKKPWNLSFSFGRAL 1345
++IAEYTVR LQRTVPAAVPAIVFLSGGQSEEEAT+NLNAMNKL TKKPW LSFSFGRAL
Sbjct: 241 QLIAEYTVRALQRTVPAAVPAIVFLSGGQSEEEATVNLNAMNKLSTKKPWALSFSFGRAL 300
Query: 1346 QQSTLKAWSGKAENEEKARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDYKY 1519
QQSTLKAW GK EN KA+KAF+ RCKANSEATLGTY+GDA LGEGASESLHVKDYKY
Sbjct: 301 QQSTLKAWGGKTENVVKAQKAFITRCKANSEATLGTYQGDAVLGEGASESLHVKDYKY 358
9636.m00174|protein Fructose-bisphosphate aldolase class-I
Length = 362
Score = 568 bits (1447), Expect = e-161
Identities = 286/358 (79%), Positives = 312/358 (86%), Gaps = 4/358 (1%)
Frame = +2
Query: 446 MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEDNRRALRELLF 625
MSAYCGKYKDELI+NAAYIGTPGKGILAADESTGTIGKR ASI VENVE+NRRALRELLF
Sbjct: 1 MSAYCGKYKDELIRNAAYIGTPGKGILAADESTGTIGKRLASIGVENVEENRRALRELLF 60
Query: 626 CTPGALQYLSGVILFEETLYQSTKGGKPFVDILKEGNVLPGIKVDKGTVELAGTNGETTT 805
PGAL LSGVILFEETLYQST+ G PFVD+L VL GIKVDKGTVELAGT+ ETTT
Sbjct: 61 TAPGALDCLSGVILFEETLYQSTRDGTPFVDVLAAAGVLAGIKVDKGTVELAGTDRETTT 120
Query: 806 QGFDDLGKRCAKYYEAGARFAKWRAVLKIG--PTEPSQLSINQNAQGLARYAIICQENGL 979
QG D LG+RC +YY AGARFAKWRAVL IG + PSQL+++ NAQGLARYAIICQENGL
Sbjct: 121 QGHDGLGERCRRYYAAGARFAKWRAVLSIGRASSRPSQLAVDANAQGLARYAIICQENGL 180
Query: 980 VPIVEPEILVDGPHDIDRCAYVTEMVLAACYKALNDQHVLLEGTLLKPNMVTPGSDAKKV 1159
VPIVEPEILVDG H I+ CA VTE VLAACYKAL+D HVLLEGTLLKPNMVTPGSDA +
Sbjct: 181 VPIVEPEILVDGEHGIEACAEVTERVLAACYKALSDHHVLLEGTLLKPNMVTPGSDAARA 240
Query: 1160 TPEVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLQT--KKPWNLSFSF 1333
PEV+AE+TVR L RTVP AVPAIVFLSGGQSEEEAT NLNAMN++ + KKPW+L+FSF
Sbjct: 241 PPEVVAEHTVRALLRTVPPAVPAIVFLSGGQSEEEATRNLNAMNQVASRGKKPWSLTFSF 300
Query: 1334 GRALQQSTLKAWSGKAENEEKARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVKDY 1513
GRALQQSTLKAW+GKAEN KA+ A L RC+ANS+ATLG Y GDA GEG SE+LHVKDY
Sbjct: 301 GRALQQSTLKAWAGKAENVGKAQAALLARCRANSQATLGAYAGDAAAGEGVSENLHVKDY 360
Query: 1514 KY 1519
KY
Sbjct: 361 KY 362
9634.m03902|protein Fructose-bisphosphate aldolase class-I
Length = 358
Score = 547 bits (1393), Expect = e-155
Identities = 280/358 (78%), Positives = 301/358 (83%), Gaps = 2/358 (0%)
Frame = +2
Query: 446 MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEDNRRALRELLF 625
MSA+ GKY DELIK A YI TPGKGILAADESTGTIGKR ASINVENVE NR+ALRELLF
Sbjct: 1 MSAFVGKYADELIKTAKYIATPGKGILAADESTGTIGKRLASINVENVEPNRQALRELLF 60
Query: 626 CTPGALQYLSGVILFEETLYQSTKGGKPFVDILKEGNVLPGIKVDKGTVELAGTNGETTT 805
TPGA QYLSGVILFEETLYQST G PFVD+LK G V+PGIKVDKGTV++AGTNGETTT
Sbjct: 61 TTPGAFQYLSGVILFEETLYQSTAAGTPFVDVLKAGGVVPGIKVDKGTVDIAGTNGETTT 120
Query: 806 QGFDDLGKRCAKYYEAGARFAKWRAVLKIGPT-EPSQLSINQNAQGLARYAIICQENGLV 982
QG D LG RCAKYYEAGARFAKWRAVLKIG EPS+L++ QNA+GLARYA+ICQENGLV
Sbjct: 121 QGLDSLGARCAKYYEAGARFAKWRAVLKIGAAGEPSELAVKQNAEGLARYALICQENGLV 180
Query: 983 PIVEPEILVDGPHDIDRCAYVTEMVLAACYKALNDQHVLLEGTLLKPNMVTPGSDAKKVT 1162
PIVEPEIL DG HDI CA VTE VLAA YK+LND VLLEGTLLKPNMVTPGSD+ KV
Sbjct: 181 PIVEPEILTDGAHDIKTCAAVTERVLAAVYKSLNDHKVLLEGTLLKPNMVTPGSDSPKVG 240
Query: 1163 PEVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLQTKKPWNLSFSFGRA 1342
EVI EYTV L+RTVP AVP IVFLSGGQSEEEA+ NLNAMNKL+ KPW L+FSFGRA
Sbjct: 241 AEVIGEYTVAALRRTVPPAVPGIVFLSGGQSEEEASQNLNAMNKLEVLKPWTLTFSFGRA 300
Query: 1343 LQQSTLKAWSGKAENEEKARKAFLVRCKANSEATLGTYKGDATLGEGA-SESLHVKDYKY 1519
LQQST+K W GK EN A+ AFL RCKANSEATLG Y G A G+ A SESL+VK Y Y
Sbjct: 301 LQQSTIKKWGGKKENVAAAQAAFLARCKANSEATLGKYGGAA--GDAATSESLYVKGYTY 358
9639.m00637|protein Fructose-bisphosphate aldolase class-I
Length = 388
Score = 383 bits (972), Expect = e-106
Identities = 203/363 (55%), Positives = 249/363 (67%), Gaps = 1/363 (0%)
Frame = +2
Query: 431 PRASTMSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEDNRRAL 610
P +M G Y DEL+K A I +PG+GILA DES T GKR ASI +EN E NR+A
Sbjct: 29 PVTVSMVVRAGAYDDELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAY 88
Query: 611 RELLFCTPGALQYLSGVILFEETLYQSTKGGKPFVDILKEGNVLPGIKVDKGTVELAGTN 790
R LL PG QY+SG ILFEETLYQST GK VDIL E ++PGIKVDKG V LAG+N
Sbjct: 89 RTLLVTAPGLGQYISGAILFEETLYQSTVDGKKIVDILTEQKIVPGIKVDKGLVPLAGSN 148
Query: 791 GETTTQGFDDLGKRCAKYYEAGARFAKWRAVLKIGPTEPSQLSINQNAQGLARYAIICQE 970
E+ QG D L R A YY+ GARFAKWR V+ I P PS+L++ + A GLARYA I Q+
Sbjct: 149 NESWCQGLDGLASREAAYYQQGARFAKWRTVVSI-PNGPSELAVKEAAWGLARYAAISQD 207
Query: 971 NGLVPIVEPEILVDGPHDIDRCAYVTEMVLAACYKALNDQHVLLEGTLLKPNMVTPGSDA 1150
NGLVPIVEPEIL+DG H IDR V + V A + + + +V+ EG LLKP+MVTPG++
Sbjct: 208 NGLVPIVEPEILLDGEHGIDRTFEVAQKVWAETFFYMAENNVMFEGILLKPSMVTPGAEC 267
Query: 1151 K-KVTPEVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLQTKKPWNLSF 1327
K + TPE +++YT++ L R +P AVP I+FLSGGQSE EAT NLNAMN Q PW++SF
Sbjct: 268 KDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMN--QGPNPWHVSF 325
Query: 1328 SFGRALQQSTLKAWSGKAENEEKARKAFLVRCKANSEATLGTYKGDATLGEGASESLHVK 1507
S+ RALQ + LK W G+ EN + A+ A L+R KANS A LG Y D E A E + VK
Sbjct: 326 SYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAE-AKEGMFVK 384
Query: 1508 DYKY 1519
+Y Y
Sbjct: 385 NYVY 388
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122490674
Number of Sequences: 59712
Number of extensions: 3935197
Number of successful extensions: 35962
Number of sequences better than 1.0e-10: 18
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35935
Number of HSP's gapped (non-prelim): 12
length of query: 599
length of database: 26,991,925
effective HSP length: 53
effective length of query: 546
effective length of database: 23,827,189
effective search space: 13009645194
effective search space used: 13009645194
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 161 (67.1 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG413 Members:57 3pri:Y 1e-123
BAB86847.1 elongation factor EF-2 [Pisum sativum]
(2889 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9630.m03028|protein AF367331 At1g56070/T6H22_13 1631 0.0
9632.m00189|protein Elongation factor G, domain IV, putative 1624 0.0
9629.m05250|protein Elongation factor G, domain IV, putative 1523 0.0
9629.m05092|protein Elongation factor G, domain IV, putative 1372 0.0
9634.m03897|protein Elongation factor G, domain IV, putative 618 e-176
9630.m03217|protein Similar to elongation factor EF-2 330 6e-90
9631.m04330|protein putative translation elongation factor 309 1e-83
9631.m03522|protein translation elongation factor G 137 9e-32
9634.m00447|protein Similar to GTP-binding membrane prote... 107 1e-22
9630.m00559|protein Similar to GTP-binding protein LepA h... 106 3e-22
9630.m01743|protein Elongation factor Tu GTP binding doma... 105 4e-22
9632.m04375|protein translation elongation factor G 104 8e-22
9629.m05356|protein Elongation factor Tu GTP binding doma... 97 1e-19
9630.m03028|protein AF367331 At1g56070/T6H22_13
Length = 843
Score = 1631 bits (4178), Expect = 0.0
Identities = 797/843 (94%), Positives = 823/843 (97%)
Frame = +1
Query: 133 MVKFTAEELRGIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 312
MVKFT EELR IMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR
Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 313 ADEAERGITIKSTGISLFYQMTPESLEMYKGDRDGDEYLINLIDSPGHVDFSSEVTAALR 492
ADEAERGITIKSTGISLFY+M+ ESL++YKG+RDG+EYLINLIDSPGHVDFSSEVTAALR
Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 493 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQFEGEEAYQTFSR 672
ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQ EGEEAYQTFSR
Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 180
Query: 673 VIENANVIMATYEDVLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEVKM 852
VIENANVIMATYED LLGDVQVYPEKGTVAFSAGLHGWAFTL++FAKMYASKFGVDE KM
Sbjct: 181 VIENANVIMATYEDTLLGDVQVYPEKGTVAFSAGLHGWAFTLSSFAKMYASKFGVDEFKM 240
Query: 853 MERLWGENFFDPATKKWTSKNTGTATCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLKK 1032
MERLWGENFFDPATKKWT+KNTG+ATCKRGFVQFCYEPIKQII TCMNDQKDKLWPML+K
Sbjct: 241 MERLWGENFFDPATKKWTNKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQK 300
Query: 1033 LGVTMKNDEKDLMGKALMKRVMQTWLPASRALLEMMIFHLPSPSKAQRYRVENLYEGPLD 1212
LGV MK DEK+LMGKALMKRVMQTWLPAS ALLEMMI+HLPSPSKAQRYRVENLYEGPLD
Sbjct: 301 LGVVMKADEKELMGKALMKRVMQTWLPASNALLEMMIYHLPSPSKAQRYRVENLYEGPLD 360
Query: 1213 DIYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFAGRVATGMKVRIMGPNFVPGQ 1392
D+YA AIRNCDP+GPLMLYVSKMIPASDKGRFFAFGRVF+GRVATGMKVRIMGPN+VPGQ
Sbjct: 361 DVYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVATGMKVRIMGPNYVPGQ 420
Query: 1393 KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVDACPIRA 1572
KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVA+VGLDQFITKNATLTNEKE DACPIRA
Sbjct: 421 KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNATLTNEKESDACPIRA 480
Query: 1573 MKFSVSPVVRVAVQCKTASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEI 1752
MKFSVSPVVRVAVQCK ASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEI
Sbjct: 481 MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEI 540
Query: 1753 CLKDLQDDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE 1932
CLKDLQ+DFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE
Sbjct: 541 CLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE 600
Query: 1933 AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI 2112
AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI
Sbjct: 601 AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI 660
Query: 2113 KDSVVAGFQWASKEGALCEENMRGICYEVCDVVLHTDAIHRGGGQVIPTARRVIYASQLT 2292
KDSVVAGFQWASKEGAL EENMRGIC+EVCDVVLH DAIHRGGGQVIPTARRVIYASQLT
Sbjct: 661 KDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLT 720
Query: 2293 AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPVIESFG 2472
AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQR GTPLYNIKAYLPVIESFG
Sbjct: 721 AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFG 780
Query: 2473 FSSTLRAATSGQAFPQCVFDHWDIMASDPLDPGTQSATLVTEIRKRKGLKEQMTPLSDFE 2652
FSS LRAATSGQAFPQCVFDHWD+M SDPL+ G+Q++TLV +IRKRKGLKEQMTPLSDFE
Sbjct: 781 FSSQLRAATSGQAFPQCVFDHWDMMTSDPLEAGSQASTLVQDIRKRKGLKEQMTPLSDFE 840
Query: 2653 DKL 2661
DKL
Sbjct: 841 DKL 843
9632.m00189|protein Elongation factor G, domain IV, putative
Length = 843
Score = 1624 bits (4159), Expect = 0.0
Identities = 794/843 (94%), Positives = 820/843 (97%)
Frame = +1
Query: 133 MVKFTAEELRGIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 312
MVKFT EELR IMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR
Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 313 ADEAERGITIKSTGISLFYQMTPESLEMYKGDRDGDEYLINLIDSPGHVDFSSEVTAALR 492
ADEAERGITIKSTGISLFY+M+ ESL++YKG+RDG+EYLINLIDSPGHVDFSSEVTAALR
Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 493 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQFEGEEAYQTFSR 672
ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQ EGEEAYQTFSR
Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 180
Query: 673 VIENANVIMATYEDVLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEVKM 852
VIENANVIMATYED LLGDVQVYPEKGTVAFSAGLHGWAFTL++FAKMYASKFGVDE KM
Sbjct: 181 VIENANVIMATYEDTLLGDVQVYPEKGTVAFSAGLHGWAFTLSSFAKMYASKFGVDESKM 240
Query: 853 MERLWGENFFDPATKKWTSKNTGTATCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLKK 1032
MERLWGENFFDPATKKWT+K+TG+ATCKRGFVQFCYEPIKQII TCMNDQKDKLWPML+K
Sbjct: 241 MERLWGENFFDPATKKWTNKSTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQK 300
Query: 1033 LGVTMKNDEKDLMGKALMKRVMQTWLPASRALLEMMIFHLPSPSKAQRYRVENLYEGPLD 1212
LGV MK DEKDLMGKALMKRVMQTWLPAS ALLEMMI+HLPSPSKAQ+YRVENLYEGPLD
Sbjct: 301 LGVVMKADEKDLMGKALMKRVMQTWLPASNALLEMMIYHLPSPSKAQKYRVENLYEGPLD 360
Query: 1213 DIYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFAGRVATGMKVRIMGPNFVPGQ 1392
D+YA AIRNCDP+GPLMLYVSKMIPASDKGRFFAFGRVF+GRVATGMKVRIMGPN+VPGQ
Sbjct: 361 DVYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVATGMKVRIMGPNYVPGQ 420
Query: 1393 KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVDACPIRA 1572
KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVA+VGLDQFITKNATLTNEKE DACPIRA
Sbjct: 421 KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNATLTNEKEADACPIRA 480
Query: 1573 MKFSVSPVVRVAVQCKTASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEI 1752
MKFSVSPVVRVAVQCK ASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEI
Sbjct: 481 MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEI 540
Query: 1753 CLKDLQDDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE 1932
CLKDLQ+DFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE
Sbjct: 541 CLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE 600
Query: 1933 AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI 2112
AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI
Sbjct: 601 AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI 660
Query: 2113 KDSVVAGFQWASKEGALCEENMRGICYEVCDVVLHTDAIHRGGGQVIPTARRVIYASQLT 2292
KDSVVAGFQWASKEGAL EENMRGIC+EVCDVVLH DAIHRGGGQVIPTARRVIYASQLT
Sbjct: 661 KDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLT 720
Query: 2293 AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPVIESFG 2472
AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQR GTPLYNIKAYLPVIESFG
Sbjct: 721 AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFG 780
Query: 2473 FSSTLRAATSGQAFPQCVFDHWDIMASDPLDPGTQSATLVTEIRKRKGLKEQMTPLSDFE 2652
FSS LRAATSGQAFPQCVFDHWD+M SDPL+ +Q+ LV +IRKRKGLKEQMTPLSDFE
Sbjct: 781 FSSQLRAATSGQAFPQCVFDHWDMMTSDPLEVSSQANQLVLDIRKRKGLKEQMTPLSDFE 840
Query: 2653 DKL 2661
DKL
Sbjct: 841 DKL 843
9629.m05250|protein Elongation factor G, domain IV, putative
Length = 826
Score = 1523 bits (3899), Expect = 0.0
Identities = 742/819 (90%), Positives = 787/819 (95%), Gaps = 2/819 (0%)
Frame = +1
Query: 133 MVKFTAEELRGIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 312
MVKFT EE+R IMDKK+NIRNMSV+AHVDHGKSTLTDSLVAAAGIIAQ+VAGDVRMTD+R
Sbjct: 1 MVKFTVEEMRRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSR 60
Query: 313 ADEAERGITIKSTGISLFYQMTPESLEMYKGDRDGDEYLINLIDSPGHVDFSSEVTAALR 492
+DEAERGITIKSTGISL+Y+M+ ESL+ YKGDRDG+EYLINLIDSPGHVDFSSEVTAALR
Sbjct: 61 SDEAERGITIKSTGISLYYEMSDESLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 493 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQFEGEEAYQTFSR 672
ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQ GEEAYQTFSR
Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVGGEEAYQTFSR 180
Query: 673 VIENANVIMATYEDVLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEVKM 852
VIENANVIMATYED LLGDVQVYPEKGTVAFSAGLHGWAFTL+NFAKMYASKFGVDE KM
Sbjct: 181 VIENANVIMATYEDALLGDVQVYPEKGTVAFSAGLHGWAFTLSNFAKMYASKFGVDESKM 240
Query: 853 MERLWGENFFDPATKKWTSKNTGTATCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLKK 1032
MERLWGEN+FDP TKKWT K+TG+ TCKRGF+QFCYEPI+QII TCMNDQKDKL PML+K
Sbjct: 241 MERLWGENYFDPTTKKWTIKHTGSDTCKRGFIQFCYEPIRQIINTCMNDQKDKLLPMLQK 300
Query: 1033 LGVTMKNDEKDLMGKALMKRVMQTWLPASRALLEMMIFHLPSPSKAQRYRVENLYEGPLD 1212
LGVTMK DL GKALMKRVMQTWLPAS ALLEMMI+HLPSP+KAQRYRVENLYEGPLD
Sbjct: 301 LGVTMK----DLTGKALMKRVMQTWLPASNALLEMMIYHLPSPAKAQRYRVENLYEGPLD 356
Query: 1213 DIYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFAGRVATGMKVRIMGPNFVPGQ 1392
DIYA+AIRNCDP+GPLMLYVSKMIPASDKGRF+AFGRVF+GRVATGMKVRIMGPN+ PGQ
Sbjct: 357 DIYASAIRNCDPEGPLMLYVSKMIPASDKGRFYAFGRVFSGRVATGMKVRIMGPNYAPGQ 416
Query: 1393 KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVDACPIRA 1572
KKDLYVK+VQRTVIWMGKKQESVE VPCGNTVA+VGLDQFITKNATLTNEKEVDACPI+A
Sbjct: 417 KKDLYVKNVQRTVIWMGKKQESVEGVPCGNTVAMVGLDQFITKNATLTNEKEVDACPIKA 476
Query: 1573 MKFSVSPVVRVAVQCKTASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEI 1752
MKFSVSPVVRVAVQCK ASDLPKLVEGLKRLAKSDPMVLCT+EESGEHIIAGAGELHLEI
Sbjct: 477 MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTVEESGEHIIAGAGELHLEI 536
Query: 1753 CLKDLQDDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE 1932
CLKDLQ+DFMGGAEI VSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARP+EEGL E
Sbjct: 537 CLKDLQEDFMGGAEITVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPMEEGLPE 596
Query: 1933 AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI 2112
AID+GRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPN+VVDMCKGVQYLNEI
Sbjct: 597 AIDEGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNIVVDMCKGVQYLNEI 656
Query: 2113 KDSVVAGFQWASKEGALCEENM--RGICYEVCDVVLHTDAIHRGGGQVIPTARRVIYASQ 2286
KDSVVAGFQWASKEGAL EENM RGIC+EVCDV+LH+DAIHRGGGQ+IPTARRVIYA+Q
Sbjct: 657 KDSVVAGFQWASKEGALAEENMRGRGICFEVCDVILHSDAIHRGGGQIIPTARRVIYAAQ 716
Query: 2287 LTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPVIES 2466
LTAKPRLLEPVYLVEIQAPENALGGIY VLNQKRGHVFEEMQR GTPLYNIKAYLPVIES
Sbjct: 717 LTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIES 776
Query: 2467 FGFSSTLRAATSGQAFPQCVFDHWDIMASDPLDPGTQSATL 2589
FGF+STLRAATSGQAFP VFDHW++++ DPL+PGT+ TL
Sbjct: 777 FGFTSTLRAATSGQAFPLFVFDHWEMLSVDPLEPGTRQLTL 817
9629.m05092|protein Elongation factor G, domain IV, putative
Length = 853
Score = 1372 bits (3511), Expect = 0.0
Identities = 659/843 (78%), Positives = 750/843 (88%), Gaps = 10/843 (1%)
Frame = +1
Query: 133 MVKFTAEELRGIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 312
MV+FTAEELR MDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQ+VAGDVRMTDTR
Sbjct: 1 MVRFTAEELRASMDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTR 60
Query: 313 ADEAERGITIKSTGISLFYQMTPESLEMYKGDRDGDEYLINLIDSPGHVDFSSEVTAALR 492
ADEAERGITIKSTGISL+Y+MT +L ++G RDG+ YLINLIDSPGH+DFSSEVTAALR
Sbjct: 61 ADEAERGITIKSTGISLYYEMTDAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALR 120
Query: 493 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQFEGEEAYQTFSR 672
ITDGALVVVDCIEGVCVQTETVLRQ+L ERI+PVLTVNKMDRCFLELQ GEEAYQ FSR
Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQSLAERIKPVLTVNKMDRCFLELQQSGEEAYQAFSR 180
Query: 673 VIENANVIMATYEDVLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEVKM 852
VIE+ NV MA YED LGD V PEKGTVAFSAGLHGWAFTL+NFAKMY +KF VDE KM
Sbjct: 181 VIESVNVTMAPYEDKNLGDCMVAPEKGTVAFSAGLHGWAFTLSNFAKMYKAKFKVDEAKM 240
Query: 853 MERLWGENFFDPATKKWTSK--NTGTATCKRGFVQFCYEPIKQIIATCMNDQKDKLWPML 1026
MERLWGEN+FD TKKWT+ +T + TC+RGFVQFCYEPI++II+ CMND K+ LW ML
Sbjct: 241 MERLWGENYFDHTTKKWTTTAPSTSSKTCQRGFVQFCYEPIRRIISACMNDDKENLWDML 300
Query: 1027 KKLGVTMKNDEKDLMGKALMKRVMQTWLPASRALLEMMIFHLPSPSKAQRYRVENLYEGP 1206
KL +T+K +EK+L GK LMKRVMQ WLPAS ALLEM++FHLPSP+KAQ+YRV+ LY+GP
Sbjct: 301 TKLKITLKAEEKELTGKKLMKRVMQAWLPASDALLEMIVFHLPSPAKAQQYRVDTLYDGP 360
Query: 1207 LDDIYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFAGRVATGMKVRIMGPNFVP 1386
LDD YA AIRNCDP GPLM+YVSKMIPASDKGRFFAFGRVF+G VATG KVRIMGPNFVP
Sbjct: 361 LDDPYATAIRNCDPKGPLMVYVSKMIPASDKGRFFAFGRVFSGTVATGNKVRIMGPNFVP 420
Query: 1387 GQKKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVDACPI 1566
G+KKDLYVK+VQRTVIWMGKKQESV+DVPCGNTVA+VGLDQFITKNATLT+EK VDA PI
Sbjct: 421 GEKKDLYVKTVQRTVIWMGKKQESVDDVPCGNTVAMVGLDQFITKNATLTDEKAVDAHPI 480
Query: 1567 RAMKFSVSPVVRVAVQCKTASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHL 1746
+AMKFSVSPVVR +V CK AS+LPKLVEGLKRLAKSDP+V+CTIEESGEH+IAG G+LHL
Sbjct: 481 KAMKFSVSPVVRKSVACKNASELPKLVEGLKRLAKSDPLVVCTIEESGEHVIAGVGQLHL 540
Query: 1747 EICLKDLQDDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPL---- 1914
EIC+KDLQ+DFMGGAEIIV PP++++RETV + SCRTVMSKSPNKHNRLYMEARPL
Sbjct: 541 EICIKDLQEDFMGGAEIIVGPPIITYRETVTKNSCRTVMSKSPNKHNRLYMEARPLDKED 600
Query: 1915 ----EEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDM 2082
E L +AIDD RIGP+DD K R KILSEEFGWDKDLAKKIW FGPET GPN++VDM
Sbjct: 601 LQQDEPSLCKAIDDERIGPKDDIKERGKILSEEFGWDKDLAKKIWAFGPETKGPNLLVDM 660
Query: 2083 CKGVQYLNEIKDSVVAGFQWASKEGALCEENMRGICYEVCDVVLHTDAIHRGGGQVIPTA 2262
CKGVQYL+EIKDSVVAGFQWASKEGAL EENMRG+C+E+CDV LH+D+IHRGGGQ+IPTA
Sbjct: 661 CKGVQYLSEIKDSVVAGFQWASKEGALAEENMRGVCFELCDVTLHSDSIHRGGGQLIPTA 720
Query: 2263 RRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRQGTPLYNIK 2442
RR +YA+QLTA PRL+EP+Y V+IQ P+ A+G +YGVLN + G + EE +R GTPL N++
Sbjct: 721 RRAMYAAQLTASPRLMEPMYQVDIQVPKTAVGNVYGVLNSRNGELVEESERTGTPLSNLR 780
Query: 2443 AYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDIMASDPLDPGTQSATLVTEIRKRKGLK 2622
YLPV +SF F+ LRA TSGQAFPQC+F HW M SDP G+++A ++T+IRKRKGLK
Sbjct: 781 FYLPVAKSFDFTEKLRAETSGQAFPQCIFHHWQTMRSDPFQEGSEAAKVITDIRKRKGLK 840
Query: 2623 EQMTPLSDFEDKL 2661
+ +TPLSD+EDKL
Sbjct: 841 DIITPLSDYEDKL 853
9634.m03897|protein Elongation factor G, domain IV, putative
Length = 997
Score = 618 bits (1577), Expect = e-176
Identities = 327/839 (38%), Positives = 507/839 (59%), Gaps = 22/839 (2%)
Frame = +1
Query: 145 TAEELRGIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIA---QEVAGDVRMTDTRA 315
T + L G+ +RN++++ H+ HGK+ D LV + E VR TDTR
Sbjct: 134 TTDFLLGLAANPALVRNVALVGHLQHGKTVFMDMLVEQTHEVDTFDSEGERHVRFTDTRV 193
Query: 316 DEAERGITIKSTGISLFYQMTPESLEMYKGDRDGDEYLINLIDSPGHVDFSSEVTAALRI 495
DE ER ++IK+ +SL + +G YL N++D+PGHV+FS E+TAALRI
Sbjct: 194 DEQERRVSIKAVPMSLVLE-----------GGNGKSYLCNIMDTPGHVNFSDEMTAALRI 242
Query: 496 TDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQFEGEEAYQTFSRV 675
DGA++VVD EGV V TE +R A ER+ V+ +NK+DR EL+ +AY
Sbjct: 243 ADGAVLVVDAAEGVMVNTERAIRHATQERLPIVVVINKVDRLITELKLPPNDAYFKLRHT 302
Query: 676 IENANVIMATYEDVLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGV--DEVK 849
+E N ++++ + G V P G V F++G GW+FTL +FA +Y G+ D K
Sbjct: 303 LEAINDLISSCSTTVGGTQLVDPAAGNVCFASGSAGWSFTLQSFAHLYLKIHGIQFDHEK 362
Query: 850 MMERLWGENFFDPATKKWTSKNTGTATCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLK 1029
RLWG+ ++ P T+ + K R FV+F EP+ +I + + + K K+ L
Sbjct: 363 FASRLWGDLYYHPDTRTFKKKPPKEGA-NRSFVEFVLEPLYKIYSQVVGESKGKVEATLS 421
Query: 1030 KLGVTMKNDEKDLMGKALMKRVMQTWLPASRALLEMMIFHLPSPSKAQRYRVENLYEGPL 1209
+LGVT+ N L + L++ ++ S +M++ H+PS A ++E++Y GP
Sbjct: 422 ELGVTLSNAAYKLNVRPLLRLACRSIFGTSTGFTDMLVKHIPSVKDAAPRKIEHIYTGPQ 481
Query: 1210 DDIYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFAGRVATGMKVRIMGPNFVPG 1389
D +A++ CDP PLM+ V+K+ P SD F AFGRV++G + TG VR++G + P
Sbjct: 482 DSTIVDAMKKCDPHAPLMVNVTKLYPKSDCSVFDAFGRVYSGTIQTGQTVRVLGEGYSPD 541
Query: 1390 QKKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEK-EVDACPI 1566
++D+ VK V + ++ + + + P G+ V + G+D I K AT+ K + D
Sbjct: 542 DEEDMTVKEVTKLWVYQARYRVPISKAPAGSWVLIEGVDASIMKTATICPMKMDEDVYIF 601
Query: 1567 RAMKFSVSPVVRVAVQCKTASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHL 1746
R ++F+ PVV++A + S+LPK+VEGL++++KS P+ + +EESGEH I G GEL+L
Sbjct: 602 RPLRFNTLPVVKIAAEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYL 661
Query: 1747 EICLKDLQDDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGL 1926
+ +KDL++ + E+ V+ PVV+F ETV++ S +++PNK N++ M A PLE+GL
Sbjct: 662 DSIMKDLRELY-SEVEVKVADPVVTFCETVVDTSSMKCFAETPNKRNKITMVAEPLEKGL 720
Query: 1927 AEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQY-- 2100
AE I++G + K + + + WD A+ IW FGPE GPN+++D V+
Sbjct: 721 AEDIENGLVSLDSRQKEITDFFRQRYQWDVLAARSIWAFGPEKQGPNILLDDTLSVEVDK 780
Query: 2101 --LNEIKDSVVAGFQWASKEGALCEENMRGICYEVCDVVLHTDAIHRGGGQVIPTARRVI 2274
LN +KDS+V GFQW ++EG LC+E +R + +++ + + + +HRGGGQ+IPTARRV+
Sbjct: 781 NLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKILNANIAPEPLHRGGGQIIPTARRVV 840
Query: 2275 YASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLP 2454
Y++ L A PRL+EPVY +EIQ P + + IY VL+++RGHV ++ + GTP+Y +KA+LP
Sbjct: 841 YSAFLMANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVTADVPKPGTPIYVVKAFLP 900
Query: 2455 VIESFGFSSTLRAATSGQAFPQCVFDHWDIMASDPLDPGTQSATL------------VTE 2598
VIESFGF + LR T GQAF VFDHW I+ DPLD L + +
Sbjct: 901 VIESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKNIVLRPLEPAPIQHLAREFMVK 960
Query: 2599 IRKRKGLKEQMTPLSDFEDKL 2661
R+RKG+ E ++ F++ +
Sbjct: 961 TRRRKGMSEDVSINKFFDEAM 981
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 181160810
Number of Sequences: 59712
Number of extensions: 4977739
Number of successful extensions: 16715
Number of sequences better than 1.0e-10: 26
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 16658
Number of HSP's gapped (non-prelim): 32
length of query: 963
length of database: 26,991,925
effective HSP length: 54
effective length of query: 908
effective length of database: 23,767,477
effective search space: 21580869116
effective search space used: 21580869116
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 163 (67.9 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG422 Members:65 3pri:Y 1e-132
AAB18209.1 chlorophyll a/b-binding protein WCAB precursor
[Triticum aestivum]
(1226 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9629.m03990|protein Chlorophyll A-B binding protein, puta... 499 e-141
9629.m05067|protein Chlorophyll A-B binding protein, puta... 499 e-141
9637.m01516|protein chlorophyll a/b-binding protein I pre... 495 e-140
9631.m03807|protein chlorophyll a/b binding protein 414 e-115
9635.m03724|protein chlorophyll a-b binding protein of lh... 343 3e-94
9637.m00977|protein Chlorophyll A-B binding protein, puta... 219 6e-57
9639.m01284|protein chlorophyll a/b-binding protein CP26 ... 215 2e-55
9634.m02114|protein chlorophyll a/b-binding protein precu... 140 4e-33
9635.m03882|protein LHCI-680, photosystem I antenna prote... 136 6e-32
9630.m05194|protein light-harvesting complex protein [imp... 128 2e-29
9630.m00958|protein chlorophyll a/b-binding protein type ... 127 5e-29
9637.m02343|protein AY086461 PSI type II chlorophyll a/b-... 122 1e-27
9639.m01283|protein chlorophyll a/b-binding protein CP26 ... 118 3e-26
9635.m03689|protein probable chlorophyll a/b-binding prot... 116 8e-26
9630.m00957|protein chlorophyll a/b-binding protein type ... 82 2e-16
9632.m03624|protein chlorophyll a/b-binding apoprotein CP... 81 5e-15
9629.m03990|protein Chlorophyll A-B binding protein, putative
Length = 261
Score = 499 bits (1271), Expect = e-141
Identities = 241/266 (90%), Positives = 248/266 (92%)
Frame = +3
Query: 63 MAAATMSLSSPAFAGKAVKNVSLSALFGEARVTMRKTTAKAKQVASSSPWYGADRVLYLG 242
MAAATM+LSSPA AGKA V FGE R+TMRK+ AK K AS SPWYGADRVLYLG
Sbjct: 1 MAAATMALSSPALAGKAAAKV-----FGEGRITMRKSAAKPKPAASGSPWYGADRVLYLG 55
Query: 243 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 422
PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 56 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 115
Query: 423 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGG 602
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGG
Sbjct: 116 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGG 175
Query: 603 PLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 782
PLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 176 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 235
Query: 783 ENLADHITDPVNNNAWAFATNFVPGK 860
ENLADH+ DPVNNNAWA+ATNFVPGK
Sbjct: 236 ENLADHLADPVNNNAWAYATNFVPGK 261
9629.m05067|protein Chlorophyll A-B binding protein, putative
Length = 265
Score = 499 bits (1270), Expect = e-141
Identities = 242/266 (90%), Positives = 252/266 (93%), Gaps = 2/266 (0%)
Frame = +3
Query: 63 MAAATMSLSSPA-FAGKAVKNVSLSALFGEARVTMRKTTAKAKQVASS-SPWYGADRVLY 236
MAA+TM+LSSPA AGKAV N + FGE RVTMRK+ AK K A+S SPWYGADRVLY
Sbjct: 1 MAASTMALSSPAALAGKAVANAKV---FGEGRVTMRKSAAKPKPAAASGSPWYGADRVLY 57
Query: 237 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 416
LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 58 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117
Query: 417 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 596
LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIW CQVVLMGAVEGYR+A
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWGCQVVLMGAVEGYRVA 177
Query: 597 GGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 776
GGPLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 777 PLENLADHITDPVNNNAWAFATNFVPGK 860
PLENLADH+ DPVNNNAWA+ATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAYATNFVPGK 265
9637.m01516|protein chlorophyll a/b-binding protein I precursor -
rice
Length = 265
Score = 495 bits (1260), Expect = e-140
Identities = 243/266 (91%), Positives = 252/266 (94%), Gaps = 1/266 (0%)
Frame = +3
Query: 63 MAAATMSLSSPAFAGKAVKNVSLSALFGEARVTMRKTTAKAKQVASS-SPWYGADRVLYL 239
MAAATM+LSSP A +A + S SALFGEAR+TMRKT AK K ASS SPWYGADRVLYL
Sbjct: 1 MAAATMALSSPVMA-RAAPSTS-SALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYL 58
Query: 240 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 419
GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 59 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 118
Query: 420 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 599
ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 119 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 178
Query: 600 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 779
GPLGE+VDPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 179 GPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 780 LENLADHITDPVNNNAWAFATNFVPGK 860
LENLADH+ DPVNNNAWA+ATNFVPGK
Sbjct: 239 LENLADHLADPVNNNAWAYATNFVPGK 265
9631.m03807|protein chlorophyll a/b binding protein
Length = 263
Score = 414 bits (1054), Expect = e-115
Identities = 200/264 (75%), Positives = 224/264 (84%), Gaps = 2/264 (0%)
Frame = +3
Query: 69 AATMSLSSPAFAGKAVKNVSLSALFGEA--RVTMRKTTAKAKQVASSSPWYGADRVLYLG 242
AA+ + +F G A + L G++ R+TMR+T A Q S WYG DR YLG
Sbjct: 2 AASALHQTTSFLGTAPRRDELVRRVGDSGGRITMRRTVKSAPQ----SIWYGPDRPKYLG 57
Query: 243 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 422
P S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L+
Sbjct: 58 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILS 117
Query: 423 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGG 602
+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYR+ GG
Sbjct: 118 KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGG 177
Query: 603 PLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 782
PLGE +D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+
Sbjct: 178 PLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 237
Query: 783 ENLADHITDPVNNNAWAFATNFVPGK 860
ENL DH+ DPV NNAWA+ATNFVPGK
Sbjct: 238 ENLFDHVADPVANNAWAYATNFVPGK 263
9635.m03724|protein chlorophyll a-b binding protein of lhcii type
iii, chloroplastprecursor (cab)
Length = 266
Score = 343 bits (871), Expect = 3e-94
Identities = 179/268 (66%), Positives = 199/268 (73%), Gaps = 2/268 (0%)
Frame = +3
Query: 54 SSPMAAATMSLSSPAFAGKAVKNVSLSALFGEARVTMRKTTAKAKQVASSSPWYGADRVL 233
S +AA T L P + V++++ +A R+TM K WYG DRV
Sbjct: 10 SRVLAAKTPFLGHPRPSNAPVRDIAAAAT---GRITMSKEL-----------WYGPDRVK 55
Query: 234 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 413
YLGP S + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE
Sbjct: 56 YLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPE 115
Query: 414 LLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 590
+L + V F E VWFKAG+QIFS+GGLDYLGNP+LVHAQSILA+ QVVLMG VEGYR
Sbjct: 116 VLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYR 175
Query: 591 IAGGPLGEIVDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 767
I G P + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVT
Sbjct: 176 INGLPGVGDGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 235
Query: 768 GKGPLENLADHITDPVNNNAWAFATNFVPG 857
GKGPLENL DH+ DPV NNAW +AT F PG
Sbjct: 236 GKGPLENLLDHLADPVANNAWVYATKFTPG 265
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79162351
Number of Sequences: 59712
Number of extensions: 2248204
Number of successful extensions: 9141
Number of sequences better than 1.0e-10: 32
Number of HSP's better than 0.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 9086
Number of HSP's gapped (non-prelim): 20
length of query: 408
length of database: 26,991,925
effective HSP length: 51
effective length of query: 357
effective length of database: 23,946,613
effective search space: 8548940841
effective search space used: 8548940841
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG424 Members:35 3pri:Y 1e-127
AAB18209.1 chlorophyll a/b-binding protein WCAB precursor
[Triticum aestivum]
(1024 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9629.m05067|protein Chlorophyll A-B binding protein, puta... 495 e-140
9629.m03990|protein Chlorophyll A-B binding protein, puta... 493 e-139
9637.m01516|protein chlorophyll a/b-binding protein I pre... 490 e-138
9631.m03807|protein chlorophyll a/b binding protein 413 e-115
9635.m03724|protein chlorophyll a-b binding protein of lh... 340 3e-93
9637.m00977|protein Chlorophyll A-B binding protein, puta... 217 3e-56
9639.m01284|protein chlorophyll a/b-binding protein CP26 ... 215 1e-55
9634.m02114|protein chlorophyll a/b-binding protein precu... 142 1e-33
9635.m03882|protein LHCI-680, photosystem I antenna prote... 137 3e-32
9630.m05194|protein light-harvesting complex protein [imp... 129 6e-30
9630.m00958|protein chlorophyll a/b-binding protein type ... 125 2e-28
9637.m02343|protein AY086461 PSI type II chlorophyll a/b-... 123 6e-28
9639.m01283|protein chlorophyll a/b-binding protein CP26 ... 118 2e-26
9635.m03689|protein probable chlorophyll a/b-binding prot... 114 2e-25
9636.m03389|protein chlorophyll a/b-binding protein presu... 108 2e-23
9632.m03624|protein chlorophyll a/b-binding apoprotein CP... 81 4e-15
9630.m00957|protein chlorophyll a/b-binding protein type ... 79 1e-14
9629.m05067|protein Chlorophyll A-B binding protein, putative
Length = 265
Score = 495 bits (1262), Expect = e-140
Identities = 239/266 (89%), Positives = 254/266 (94%), Gaps = 2/266 (0%)
Frame = +1
Query: 37 MAATTMSLSS-SSFAGKMVENIPSSALFGEARVTMRKTAAKAKQVS-SGSPWYGADRVLY 210
MAA+TM+LSS ++ AGK V N + +FGE RVTMRK+AAK K + SGSPWYGADRVLY
Sbjct: 1 MAASTMALSSPAALAGKAVAN---AKVFGEGRVTMRKSAAKPKPAAASGSPWYGADRVLY 57
Query: 211 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPEL 390
LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 58 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117
Query: 391 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 570
LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIW CQVVLMGAVEGYRVA
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWGCQVVLMGAVEGYRVA 177
Query: 571 GGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKG 750
GGPLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 751 PLENLADHIADPINNNAWAFATNFVPGK 834
PLENLADH+ADP+NNNAWA+ATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAYATNFVPGK 265
9629.m03990|protein Chlorophyll A-B binding protein, putative
Length = 261
Score = 493 bits (1255), Expect = e-139
Identities = 234/266 (87%), Positives = 248/266 (92%)
Frame = +1
Query: 37 MAATTMSLSSSSFAGKMVENIPSSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLG 216
MAA TM+LSS + AGK + FGE R+TMRK+AAK K +SGSPWYGADRVLYLG
Sbjct: 1 MAAATMALSSPALAGKAAAKV-----FGEGRITMRKSAAKPKPAASGSPWYGADRVLYLG 55
Query: 217 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLA 396
PLSGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 56 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 115
Query: 397 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGG 576
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AGG
Sbjct: 116 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGG 175
Query: 577 PLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGPL 756
PLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 176 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 235
Query: 757 ENLADHIADPINNNAWAFATNFVPGK 834
ENLADH+ADP+NNNAWA+ATNFVPGK
Sbjct: 236 ENLADHLADPVNNNAWAYATNFVPGK 261
9637.m01516|protein chlorophyll a/b-binding protein I precursor -
rice
Length = 265
Score = 490 bits (1249), Expect = e-138
Identities = 238/266 (89%), Positives = 249/266 (93%), Gaps = 1/266 (0%)
Frame = +1
Query: 37 MAATTMSLSSSSFAGKMVENIPSSALFGEARVTMRKTAAKAKQV-SSGSPWYGADRVLYL 213
MAA TM+LSS A SSALFGEAR+TMRKTAAK K SSGSPWYGADRVLYL
Sbjct: 1 MAAATMALSSPVMARAAPST--SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYL 58
Query: 214 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 393
GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL
Sbjct: 59 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 118
Query: 394 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 573
ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AG
Sbjct: 119 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 178
Query: 574 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGP 753
GPLGE+VDPLYPGG+FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 179 GPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 754 LENLADHIADPINNNAWAFATNFVPGK 834
LENLADH+ADP+NNNAWA+ATNFVPGK
Sbjct: 239 LENLADHLADPVNNNAWAYATNFVPGK 265
9631.m03807|protein chlorophyll a/b binding protein
Length = 263
Score = 413 bits (1049), Expect = e-115
Identities = 198/263 (75%), Positives = 222/263 (84%)
Frame = +1
Query: 46 TTMSLSSSSFAGKMVENIPSSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLS 225
TT L ++ ++V + S R+TMR+T A Q S WYG DR YLGP S
Sbjct: 9 TTSFLGTAPRRDELVRRVGDSG----GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFS 60
Query: 226 GEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNG 405
+ PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPE+L++NG
Sbjct: 61 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNG 120
Query: 406 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 585
VKFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRV GGPLG
Sbjct: 121 VKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLG 180
Query: 586 EIVDPLYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGPLENL 765
E +D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL
Sbjct: 181 EGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 240
Query: 766 ADHIADPINNNAWAFATNFVPGK 834
DH+ADP+ NNAWA+ATNFVPGK
Sbjct: 241 FDHVADPVANNAWAYATNFVPGK 263
9635.m03724|protein chlorophyll a-b binding protein of lhcii type
iii, chloroplastprecursor (cab)
Length = 266
Score = 340 bits (862), Expect = 3e-93
Identities = 177/265 (66%), Positives = 200/265 (74%), Gaps = 5/265 (1%)
Frame = +1
Query: 37 MAATTMSLSSSSFAGK---MVENIPSSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVL 207
MA+T M+ +S A K + PS+A + AA + S WYG DRV
Sbjct: 1 MASTIMAPTSRVLAAKTPFLGHPRPSNAPVRDIAA-----AATGRITMSKELWYGPDRVK 55
Query: 208 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPE 387
YLGP S + PSYL GEFPGDYGWDTAGLSADPE F++NR LEVIH RWAMLGALGC+ PE
Sbjct: 56 YLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPE 115
Query: 388 LLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 564
+L + V F E VWFKAG+QIFS+GGLDYLGNP+LVHAQSILA+ QVVLMG VEGYR
Sbjct: 116 VLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYR 175
Query: 565 VAGGPLGEIVDPLYPGGS-FDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVT 741
+ G P + LYPGG FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVT
Sbjct: 176 INGLPGVGDGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 235
Query: 742 GKGPLENLADHIADPINNNAWAFATNFVPG 831
GKGPLENL DH+ADP+ NNAW +AT F PG
Sbjct: 236 GKGPLENLLDHLADPVANNAWVYATKFTPG 265
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68438651
Number of Sequences: 59712
Number of extensions: 1974432
Number of successful extensions: 8627
Number of sequences better than 1.0e-10: 34
Number of HSP's better than 0.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 8571
Number of HSP's gapped (non-prelim): 22
length of query: 341
length of database: 26,991,925
effective HSP length: 51
effective length of query: 289
effective length of database: 23,946,613
effective search space: 6920571157
effective search space used: 6920571157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG454 Members:2 3pri:Y .052
BAB90465.1 P0510C12.9 [Oryza sativa (japonica cultivar-group)]
dbj|BAB92803.1| P0039G05.22 [Oryza sativa (japonica cultiv
(530 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9629.m04344|protein hypothetical protein 75 1e-13
9629.m04344|protein hypothetical protein
Length = 101
Score = 74.9 bits (181), Expect = 1e-13
Identities = 57/99 (57%), Positives = 62/99 (62%), Gaps = 13/99 (13%)
Frame = +2
Query: 137 MASLKAVKPTGLEGQAKEPTKVSATKGPAKLSNTATKPAAAKGGIKKAESKPREPKKRQV 316
MASLKAVKP GL AKEP AKLS TATKPAAAKGG+KKAE KPREPKK
Sbjct: 1 MASLKAVKPAGL---AKEPA--------AKLSETATKPAAAKGGVKKAEQKPREPKK--- 46
Query: 317 KSTKPAAAKN*QRQQENGACIAI-------------SMVL*IIYESCLSLPL 433
KS K+ + QQ G+ I S + YES LSLPL
Sbjct: 47 KSFGYFHVKSGEEQQAGGSQKLIVATGEMEIVRGSPSYAMLWDYESRLSLPL 98
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30273102
Number of Sequences: 59712
Number of extensions: 712559
Number of successful extensions: 2909
Number of sequences better than 1.0e-10: 2
Number of HSP's better than 0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2908
Number of HSP's gapped (non-prelim): 1
length of query: 176
length of database: 26,991,925
effective HSP length: 49
effective length of query: 127
effective length of database: 24,066,037
effective search space: 3056386699
effective search space used: 3056386699
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 155 (64.8 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG495 Members:30 3pri:Y 1e-115
P40880 Carbonic anhydrase, chloroplast precursor (Carbonate
dehydratase) pir||T04478 probable carbonate dehydratase (
(1774 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9629.m04324|protein Carbonic anhydrase, putative 407 e-113
9629.m04323|protein Carbonic anhydrase, putative 370 e-102
9637.m02550|protein carbonate dehydratase, putative 186 1e-46
9637.m02548|protein carbonate dehydratase, putative 182 2e-45
9637.m02549|protein carbonate dehydratase, putative 182 2e-45
9637.m02551|protein carbonate dehydratase, putative 117 5e-26
9632.m01958|protein plant integral membrane protein TIGR0... 115 3e-25
9629.m04325|protein retrotransposon protein, putative, un... 92 3e-18
9629.m04324|protein Carbonic anhydrase, putative
Length = 262
Score = 407 bits (1035), Expect = e-113
Identities = 206/261 (78%), Positives = 222/261 (84%), Gaps = 6/261 (2%)
Frame = +2
Query: 245 MSGCLCLPCCYKK------SPAPAPAGENNKPAAAAAAAAAAIDSSSSSLIQKPTYHPPP 406
MSGCLCLP YKK SP P A + AAAAAA +IDSSSS + HPPP
Sbjct: 1 MSGCLCLPR-YKKAPNGTPSPPPPAAAAEAEAAAAAAATKPSIDSSSSPSLLTNN-HPPP 58
Query: 407 PPPSNKMDAAVERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTL 586
+KMDAAV+RLK GF KFKTE YDKKP+ FEPLKAGQAPKYMVF+CADSRVCPSVT+
Sbjct: 59 ----SKMDAAVDRLKDGFAKFKTEFYDKKPELFEPLKAGQAPKYMVFSCADSRVCPSVTM 114
Query: 587 GLEPGEAFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLS 766
GLEPGEAFT+RNIANMVPAYCK K+AGVGSAIEYAVCALKVE+IVVIGHSRCGGIKALLS
Sbjct: 115 GLEPGEAFTVRNIANMVPAYCKIKHAGVGSAIEYAVCALKVELIVVIGHSRCGGIKALLS 174
Query: 767 LKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFV 946
LKDGA DSFHFVEDWVR GFPAKKKVQTE AS+PFDDQC +LEKEAVN SL+NL TYPFV
Sbjct: 175 LKDGAPDSFHFVEDWVRTGFPAKKKVQTEHASLPFDDQCAILEKEAVNQSLENLKTYPFV 234
Query: 947 KEGVTNGTLKLVGGHYDFVSGKFETWE 1027
KEG+ NGTLKLVGGHYDFVSG + WE
Sbjct: 235 KEGIANGTLKLVGGHYDFVSGNLDLWE 261
9629.m04323|protein Carbonic anhydrase, putative
Length = 272
Score = 370 bits (941), Expect = e-102
Identities = 183/235 (77%), Positives = 204/235 (85%), Gaps = 11/235 (4%)
Frame = +2
Query: 323 AAAAAAAAAAIDSSSSS-----------LIQKPTYHPPPPPPSNKMDAAVERLKTGFEKF 469
A+ A+ + ++ SSS+S + P + P P + MDAAV+RLK GF KF
Sbjct: 28 ASLASPSPSSSSSSSNSSNLPAPFRPRLIRNTPVFAAPVAPAA--MDAAVDRLKDGFAKF 85
Query: 470 KTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYC 649
KTE YDKKP+ FEPLKAGQAPKYMVF+CADSRVCPSVT+GLEPGEAFT+RNIANMVPAYC
Sbjct: 86 KTEFYDKKPELFEPLKAGQAPKYMVFSCADSRVCPSVTMGLEPGEAFTVRNIANMVPAYC 145
Query: 650 KNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFP 829
K K+AGVGSAIEYAVCALKVE+IVVIGHSRCGGIKALLSLKDGA DSFHFVEDWVR GFP
Sbjct: 146 KIKHAGVGSAIEYAVCALKVELIVVIGHSRCGGIKALLSLKDGAPDSFHFVEDWVRTGFP 205
Query: 830 AKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSG 1009
AKKKVQTE AS+PFDDQC +LEKEAVN SL+NL TYPFVKEG+ NGTLKLVGGHYDFVSG
Sbjct: 206 AKKKVQTEHASLPFDDQCAILEKEAVNQSLENLKTYPFVKEGIANGTLKLVGGHYDFVSG 265
Query: 1010 KFETWE 1027
+ WE
Sbjct: 266 NLDLWE 271
9637.m02550|protein carbonate dehydratase, putative
Length = 333
Score = 186 bits (467), Expect = 1e-46
Identities = 123/342 (35%), Positives = 169/342 (48%), Gaps = 2/342 (0%)
Frame = +2
Query: 2 RLTGATQPSRPVPAPPPSPPASAPPRPPPPPPSAPSSSGPPPSRPRPSHLHCNPSVHPSG 181
RL A +R PA S S PP P PP P PP HL + H G
Sbjct: 12 RLAAAAAAARAAPA---SVAHSPPPAPMPPQPC-------PPEDAALQHLR-RATGHDDG 60
Query: 182 ERREKREERRENKRVESR*LKMSGCLCLPCCYKKSPAPAPAGENNKPAAAAAAAAAAIDS 361
+P ++ P+ P + P A+ D
Sbjct: 61 ---------------------------VPAAGEQPPSRRPIHRRDFPCTTMASR----DH 89
Query: 362 SSSSLIQKPTYHPPPPPPSNKMDAAVERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYM 541
S + H + D +E LK F FK ++ L Q PK+M
Sbjct: 90 SGLTRQLLDFQHGTVDEIDGEHDPFME-LKARFMDFKHRNCVDNISNYQNLAQQQTPKFM 148
Query: 542 VFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIV 721
V ACADSRVCPS LG +PGEAFT+RNIAN+VP Y ++ + +A+E+AV L+VE ++
Sbjct: 149 VVACADSRVCPSSVLGFQPGEAFTVRNIANLVPPY-QHGASETSAALEFAVNTLEVENVL 207
Query: 722 VIGHSRCGGIKALLSLKDGADDSFH--FVEDWVRIGFPAKKKVQTECASMPFDDQCTVLE 895
V+GHSRCGGI+AL+S+K DDS F+ DWV I A+ + ++ F+ QC E
Sbjct: 208 VVGHSRCGGIQALMSMKSKQDDSQSRSFIRDWVSIAKSARLSTEAAAGNLNFELQCKHCE 267
Query: 896 KEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETWE 1027
KE++N SL NLLTYP++++ V GTL L GG+Y+F+ FE W+
Sbjct: 268 KESINSSLLNLLTYPWIEKRVNEGTLSLHGGYYNFIDCTFEKWK 311
9637.m02548|protein carbonate dehydratase, putative
Length = 250
Score = 182 bits (457), Expect = 2e-45
Identities = 93/194 (47%), Positives = 128/194 (65%), Gaps = 2/194 (1%)
Frame = +2
Query: 446 LKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNI 625
LK F FK ++ L Q PK+MV ACADSRVCPS LG +PGEAFT+RNI
Sbjct: 34 LKARFMDFKHRNCVDNISNYQNLAQQQTPKFMVVACADSRVCPSSVLGFQPGEAFTVRNI 93
Query: 626 ANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFH--F 799
AN+VP Y ++ + +A+E+AV L+VE ++V+GHSRCGGI+AL+S+K DDS F
Sbjct: 94 ANLVPPY-QHGASETSAALEFAVNTLEVENVLVVGHSRCGGIQALMSMKSKQDDSQSRSF 152
Query: 800 VEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKL 979
+ DWV I A+ + ++ F+ QC EKE++N SL NLLTYP++++ V GTL L
Sbjct: 153 IRDWVSIAKSARLSTEAAAGNLNFELQCKHCEKESINSSLLNLLTYPWIEKRVNEGTLSL 212
Query: 980 VGGHYDFVSGKFETWE 1027
GG+Y+F+ FE W+
Sbjct: 213 HGGYYNFIDCTFEKWK 228
9637.m02549|protein carbonate dehydratase, putative
Length = 306
Score = 182 bits (457), Expect = 2e-45
Identities = 93/194 (47%), Positives = 128/194 (65%), Gaps = 2/194 (1%)
Frame = +2
Query: 446 LKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNI 625
LK F FK ++ L Q PK+MV ACADSRVCPS LG +PGEAFT+RNI
Sbjct: 90 LKARFMDFKHRNCVDNISNYQNLAQQQTPKFMVVACADSRVCPSSVLGFQPGEAFTVRNI 149
Query: 626 ANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFH--F 799
AN+VP Y ++ + +A+E+AV L+VE ++V+GHSRCGGI+AL+S+K DDS F
Sbjct: 150 ANLVPPY-QHGASETSAALEFAVNTLEVENVLVVGHSRCGGIQALMSMKSKQDDSQSRSF 208
Query: 800 VEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKL 979
+ DWV I A+ + ++ F+ QC EKE++N SL NLLTYP++++ V GTL L
Sbjct: 209 IRDWVSIAKSARLSTEAAAGNLNFELQCKHCEKESINSSLLNLLTYPWIEKRVNEGTLSL 268
Query: 980 VGGHYDFVSGKFETWE 1027
GG+Y+F+ FE W+
Sbjct: 269 HGGYYNFIDCTFEKWK 284
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127460182
Number of Sequences: 59712
Number of extensions: 4637041
Number of successful extensions: 176762
Number of sequences better than 1.0e-10: 16
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 176714
Number of HSP's gapped (non-prelim): 19
length of query: 591
length of database: 26,991,925
effective HSP length: 53
effective length of query: 537
effective length of database: 23,827,189
effective search space: 12795200493
effective search space used: 12795200493
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 161 (67.1 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG515 Members:3 3pri:N 1e-73
AAG13467.1 putative proline oxidase [Oryza sativa (japonica
cultivar-group)] gb|AAP54933.1| putative proline oxidase [Ory
(557 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9638.m03659|protein putative proline oxidase 314 1e-85
9638.m03659|protein putative proline oxidase
Length = 490
Score = 314 bits (795), Expect = 1e-85
Identities = 156/185 (84%), Positives = 170/185 (91%), Gaps = 1/185 (0%)
Frame = +2
Query: 2 LTAEEERELQLAHDRLLAVGARCAEHDIPLLVDAEYASVQPSIDYFTFVGALACNGGGRP 181
L AEEEREL++AH RLLA+G RCAE+DIPLLVDAEYA+VQP+IDYFTF GALA NGGGRP
Sbjct: 239 LEAEEERELEMAHGRLLAIGERCAEYDIPLLVDAEYATVQPAIDYFTFAGALAFNGGGRP 298
Query: 182 IVHGTVQAYLRDARDRLDAMVRAAEEERVCLGVKIVRGAYLTREARLAESLGVPSPIHGS 361
IVHGTVQAYLRDARDRL+AM RAA+ ERVCL +K+VRGAYL REARLA SLGVPSP+H S
Sbjct: 299 IVHGTVQAYLRDARDRLEAMARAAQGERVCLALKLVRGAYLAREARLAASLGVPSPVHRS 358
Query: 362 IQDTHDCYNGCAAFLLERVRRGSASVMLATHNVESGQLAAARAQELGI-GKGDRNLQFAQ 538
IQDTHDCYNGCAAFLL+RVRRG+A+V LATHNVESGQLAAARA ELGI G GDR LQFAQ
Sbjct: 359 IQDTHDCYNGCAAFLLDRVRRGAAAVTLATHNVESGQLAAARALELGIGGGGDRGLQFAQ 418
Query: 539 LMGMAD 556
LMGMAD
Sbjct: 419 LMGMAD 424
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46644594
Number of Sequences: 59712
Number of extensions: 1663900
Number of successful extensions: 30056
Number of sequences better than 1.0e-10: 2
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30053
Number of HSP's gapped (non-prelim): 2
length of query: 185
length of database: 26,991,925
effective HSP length: 49
effective length of query: 136
effective length of database: 24,066,037
effective search space: 3272981032
effective search space used: 3272981032
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 156 (65.2 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG542 Members:74 3pri:Y 8e-42
NP_197221.1 expressed protein [Arabidopsis thaliana]
dbj|BAB10506.1| gb|AAF26109.1~gene_id:MKP11.4~similar to unknown prot
(900 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9630.m04919|protein expressed protein 256 3e-68
9631.m01309|protein T1N15.5 81 3e-15
9630.m04919|protein expressed protein
Length = 132
Score = 256 bits (648), Expect = 3e-68
Identities = 126/132 (95%), Positives = 128/132 (96%)
Frame = +3
Query: 171 MALEWVVLGYAAGAEAIMLLLLTLPGLDALRRGMISVVRSALKPMMSVVPFCLFLLMDIY 350
MALEWVVLGYAAGAEAIMLLLLTLPGLD LRRGMISVVRSALKPMMSVVPFCLFLLMDIY
Sbjct: 1 MALEWVVLGYAAGAEAIMLLLLTLPGLDGLRRGMISVVRSALKPMMSVVPFCLFLLMDIY 60
Query: 351 WKYEMRPTCDDEHACTPSEHLRHQKSIMKSQRNALLIAAALLLYWILFSVTSLVVKLDHL 530
WKYE RPTCDDEH CTPSEHLRHQKSIMKSQRNALLIAAALLLYWILFS+TSLVV+LD L
Sbjct: 61 WKYETRPTCDDEHHCTPSEHLRHQKSIMKSQRNALLIAAALLLYWILFSITSLVVRLDQL 120
Query: 531 QQRVDKLKKRDD 566
QQRVDKLKKRDD
Sbjct: 121 QQRVDKLKKRDD 132
9631.m01309|protein T1N15.5
Length = 180
Score = 80.8 bits (196), Expect = 3e-15
Identities = 50/129 (38%), Positives = 77/129 (58%), Gaps = 51/129 (39%)
Frame = +3
Query: 171 MALEWVVLGYAAGAEAIMLLLLTLPGLDALRRGMISVVRSALKPMMSVVPFCLFLLMDIY 350
MAL+W++L AEA + ++LTLP A+R+ ++ + L+P ++PF F L+DIY
Sbjct: 1 MALQWMILACVVAAEAAVAVMLTLPAPRAVRKQIVGLTSMLLQPFAGILPFAAFQLLDIY 60
Query: 351 WKYEMRPTCDDEHACTPSEHLRHQKS---------------------------------- 428
WK E R C E CT E +R +KS
Sbjct: 61 WKNEHRLMCTSE-ICTADERIRFEKSELLLGKEENWPYFGNPLWPYIHHYSLRSGGIVCI 119
Query: 429 -----------------IMKSQRNALLIAAALLLYWILFSVTSLVVKLDHLQQRVDKLKK 557
I K+QRN +L +A LLYW +F + + L++ +LK+
Sbjct: 120 CTSHTLKDVLLPDIECLIFKAQRNVILCVSACLLYWCIFRICKYNKDIKALEETEKRLKE 179
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66028042
Number of Sequences: 59712
Number of extensions: 2529481
Number of successful extensions: 75017
Number of sequences better than 1.0e-10: 4
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75014
Number of HSP's gapped (non-prelim): 3
length of query: 300
length of database: 26,991,925
effective HSP length: 51
effective length of query: 248
effective length of database: 23,946,613
effective search space: 5938760024
effective search space used: 5938760024
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG565 Members:12 3pri:Y 2e-89
O49818 Lactoylglutathione lyase (Methylglyoxalase)
(Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase)
(1015 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9633.m02024|protein lactoylglutathione lyase, putative 305 1e-82
9630.m01682|protein lactoylglutathione lyase, putative 83 6e-16
9630.m01683|protein lactoylglutathione lyase, putative 82 2e-15
9633.m01239|protein glyoxalase I, putative 81 4e-15
9630.m01684|protein lactoylglutathione lyase, putative 78 3e-14
9636.m00879|protein lactoylglutathione lyase, putative 66 8e-11
9633.m02024|protein lactoylglutathione lyase, putative
Length = 352
Score = 305 bits (772), Expect = 1e-82
Identities = 141/154 (91%), Positives = 146/154 (94%)
Frame = +1
Query: 259 MFRVKDPKVSLDFYSRVMGMSLLKRLDFPEMKFSLYFLGYEDLSAAPVDPVQRTGWTFGQ 438
MFRVKDPKVSLDFYSRVMGMSLLKRLDFPEMKFSLYFLGYED+ +AP DPV+RT WTFGQ
Sbjct: 199 MFRVKDPKVSLDFYSRVMGMSLLKRLDFPEMKFSLYFLGYEDVESAPTDPVKRTVWTFGQ 258
Query: 439 KATIELTHNWGTENDPEFKGYHNGNSDPRGFGHIGVTVDDVYKACERFERLGVEFVKKPD 618
+AT+ELTHNWGTENDPEFKGYHNGNSDPRGFGHIGVTV DVYKACERFERLGVEFVKKPD
Sbjct: 259 RATLELTHNWGTENDPEFKGYHNGNSDPRGFGHIGVTVHDVYKACERFERLGVEFVKKPD 318
Query: 619 DGKMKGIAFIKDPDGYWIEIFDLKRIGEVTGTAS 720
DGKMKGIAFIKDPDGYWIEIFDL RIG VT AS
Sbjct: 319 DGKMKGIAFIKDPDGYWIEIFDLNRIGAVTAEAS 352
Score = 83.1 bits (202), Expect = 7e-16
Identities = 58/88 (65%), Positives = 64/88 (71%), Gaps = 3/88 (3%)
Frame = +1
Query: 4 MPAASLLRSSLLLSS-HALRRLSSASASAPRGLRLAQPKGFGRSYPPALAAAAMSTSSGA 180
M AA++ +SLL SS ALRRLSSA+ + R AQ K F R+ A AAAMSTSSG
Sbjct: 1 MAAAAIAAASLLPSSAFALRRLSSAANVS----RFAQLKRFDRARRFA-PAAAMSTSSGP 55
Query: 181 KEAPANNPGLQA--EVDPATKGYFMQQTMFR 267
KEAPANNPGLQA E DPATKGYFMQQT R
Sbjct: 56 KEAPANNPGLQAPSEKDPATKGYFMQQTSGR 86
9630.m01682|protein lactoylglutathione lyase, putative
Length = 345
Score = 83.5 bits (203), Expect = 6e-16
Identities = 74/228 (32%), Positives = 108/228 (46%), Gaps = 6/228 (2%)
Frame = +1
Query: 1 AMPAASLLRSSLLLSSHALRRLSSASASAPRGLRLAQPKGFGRSYPPALAAAAMSTSSGA 180
A + ++ R SLLLS+ +A+A P +RL + G S P L A S A
Sbjct: 16 ACASPAVPRRSLLLST-------AAAALQPEPVRLTR----GASAAPKLRA---SPPDAA 61
Query: 181 KEAPANNPGLQAEVDPATKGYFMQQTMFRVKDPKVSLDFYSRVMGMSLLKRLDFPEMKFS 360
+ A A +A + + ++RV D ++ FY+ +GM LL++ D PE K++
Sbjct: 62 QAAAAFGSKEEAFAWAKSDNRRLLHVVYRVGDIDRTIKFYTECLGMKLLRKRDIPEEKYT 121
Query: 361 LYFLGY--EDLSAAPVDPVQRTGWTFGQKATIELTHNWGTENDPEFKGYHNGNSDPRGFG 534
FLGY ED +ELT+N+G + Y G GFG
Sbjct: 122 NAFLGYGAED-----------------NHFVVELTYNYGVDK------YDIG----AGFG 154
Query: 535 HIGVTVDDVYKACERFERLGVEFVKKPDDGKMKG----IAFIKDPDGYWIEIFD 684
H G+ VDDV K E G + ++P G +KG IAF++DPDGY EI +
Sbjct: 155 HFGIAVDDVAKTVELIRAKGGKVTREP--GPVKGGKTVIAFVEDPDGYKFEILE 206
9630.m01683|protein lactoylglutathione lyase, putative
Length = 377
Score = 81.9 bits (199), Expect = 2e-15
Identities = 69/211 (32%), Positives = 99/211 (46%), Gaps = 6/211 (2%)
Frame = +1
Query: 52 ALRRLSSASASAPRGLRLAQPKGFGRSYPPALAAAAMSTSSGAKEAPANNPGLQAEVDPA 231
A+R L +A P +RL + G S P L A S A+ A A +A
Sbjct: 58 AVRLLGWTAALQPEPVRLTR----GASAAPKLRA---SPPDAAQAAAAFGSKEEAFAWAK 110
Query: 232 TKGYFMQQTMFRVKDPKVSLDFYSRVMGMSLLKRLDFPEMKFSLYFLGY--EDLSAAPVD 405
+ + ++RV D ++ FY+ +GM LL++ D PE K++ FLGY ED
Sbjct: 111 SDNRRLLHVVYRVGDIDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGAED------- 163
Query: 406 PVQRTGWTFGQKATIELTHNWGTENDPEFKGYHNGNSDPRGFGHIGVTVDDVYKACERFE 585
+ELT+N+G + Y G GFGH G+ VDDV K E
Sbjct: 164 ----------NHFVVELTYNYGVDK------YDIG----AGFGHFGIAVDDVAKTVELIR 203
Query: 586 RLGVEFVKKPDDGKMKG----IAFIKDPDGYWIEIFD 684
G + ++P G +KG IAF++DPDGY EI +
Sbjct: 204 AKGGKVTREP--GPVKGGKTVIAFVEDPDGYKFEILE 238
9633.m01239|protein glyoxalase I, putative
Length = 313
Score = 80.8 bits (196), Expect = 4e-15
Identities = 74/228 (32%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Frame = +1
Query: 1 AMPAASLLRSSLLLSSHALRR---LSSASASAPRGLRLAQPKGFGRSYPPALAAAAMSTS 171
A AAS LR +L SS A R A+A +RLA+ ++A A +
Sbjct: 11 AAAAASRLRLPVLSSSVARREALLFGGRVAAARAPVRLARR---------GVSAGAEAGG 61
Query: 172 SGAKEAPANNPGLQAEVDPATKGYF-MQQTMFRVKDPKVSLDFYSRVMGMSLLKRLDFPE 348
S + A A G V+ K M ++RV D ++ FY+ +GM LL++ D PE
Sbjct: 62 SSSAAAAAQVIGQDEAVEWVKKDRRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE 121
Query: 349 MKFSLYFLGYEDLSAAPVDPVQRTGWTFGQKATIELTHNWGTENDPEFKGYHNGNSDPRG 528
+++ FLGY P D +ELT+N+G E+ Y G +
Sbjct: 122 ERYTNAFLGY-----GPED----------SHFVVELTYNYGVES------YDIGTA---- 156
Query: 529 FGHIGVTVDDVYKACERFERLGVEFVKKPDDGKMKG----IAFIKDPDGYWIEIFD 684
FGH G+ V+DV K + + G ++P G +KG IAFI+DPDGY E+ +
Sbjct: 157 FGHFGIAVEDVAKTVDLIKAKGGTVTREP--GPVKGGKSVIAFIEDPDGYKFELIE 210
9630.m01684|protein lactoylglutathione lyase, putative
Length = 290
Score = 77.6 bits (188), Expect = 3e-14
Identities = 62/186 (33%), Positives = 87/186 (46%), Gaps = 6/186 (3%)
Frame = +1
Query: 127 RSYPPALAAAAMSTSSGAKEAPANNPGLQAEVDPATKGYFMQQTMFRVKDPKVSLDFYSR 306
R+ P A AAA S A ++N L ++RV D ++ FY+
Sbjct: 2 RALPMAAAAAFGSKEEAFAWAKSDNRRLL-------------HVVYRVGDIDRTIKFYTE 48
Query: 307 VMGMSLLKRLDFPEMKFSLYFLGY--EDLSAAPVDPVQRTGWTFGQKATIELTHNWGTEN 480
+GM LL++ D PE K++ FLGY ED +ELT+N+G +
Sbjct: 49 CLGMKLLRKRDIPEEKYTNAFLGYGAED-----------------NHFVVELTYNYGVDK 91
Query: 481 DPEFKGYHNGNSDPRGFGHIGVTVDDVYKACERFERLGVEFVKKPDDGKMKG----IAFI 648
Y G GFGH G+ VDDV K E G + ++P G +KG IAF+
Sbjct: 92 ------YDIG----AGFGHFGIAVDDVAKTVELIRAKGGKVTREP--GPVKGGKTVIAFV 139
Query: 649 KDPDGYWIEIFD 684
+DPDGY EI +
Sbjct: 140 EDPDGYKFEILE 151
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71934185
Number of Sequences: 59712
Number of extensions: 2501851
Number of successful extensions: 83860
Number of sequences better than 1.0e-10: 12
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 83838
Number of HSP's gapped (non-prelim): 12
length of query: 338
length of database: 26,991,925
effective HSP length: 51
effective length of query: 286
effective length of database: 23,946,613
effective search space: 6848731318
effective search space used: 6848731318
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG592 Members:46 3pri:Y 1e-127
CAE03504.1 OSJNBa0053K19.12 [Oryza sativa (japonica
cultivar-group)]
(1552 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9632.m05164|protein glycine cleavage system T protein 780 0.0
9631.m03557|protein putative protein kinase 90 7e-18
9633.m00004|protein transposon protein, putative, CACTA, ... 80 1e-14
9630.m00367|protein transposon protein, putative, CACTA, ... 79 2e-14
9629.m00111|protein transposon protein, putative, CACTA, ... 77 9e-14
9629.m00112|protein transposon protein, putative, CACTA, ... 77 9e-14
9635.m04045|protein transposon protein, putative, CACTA, ... 71 4e-12
9632.m03436|protein transposon protein, putative, CACTA, ... 70 9e-12
9639.m04036|protein transposon protein, putative, CACTA, ... 70 9e-12
9629.m05120|protein retrotransposon protein, putative, Ty... 69 2e-11
9636.m00525|protein dna-directed rna polymerase ii larges... 69 2e-11
9636.m00068|protein transposon protein, putative, CACTA, ... 69 2e-11
9631.m02812|protein retrotransposon protein, putative, un... 69 2e-11
9638.m00204|protein transposon protein, putative, CACTA, ... 69 3e-11
9633.m02231|protein hypothetical protein 68 4e-11
9632.m05164|protein glycine cleavage system T protein
Length = 408
Score = 780 bits (1993), Expect = 0.0
Identities = 385/411 (93%), Positives = 395/411 (95%)
Frame = +3
Query: 30 MRGLLACATLARRAAAASSTASSTAARRHLAGAAEVAEAELKKTALYDFHVAHGGKMVPF 209
MRGLLACATLARRAA A+STA RRHLAGAAE AEAELKKTALYDFHVAHGGKMVPF
Sbjct: 1 MRGLLACATLARRAAGATSTA-----RRHLAGAAEAAEAELKKTALYDFHVAHGGKMVPF 55
Query: 210 AGWSMPIQYKDTIMDSTLNCRANGSLFDVSHMCGLSLQGRQAIPFLESLVVADVAALKDG 389
AGWSMPIQYKDTIMDSTLNCRANGSLFDVSHMCGLSL GRQAIPFLESLVVADVAALKDG
Sbjct: 56 AGWSMPIQYKDTIMDSTLNCRANGSLFDVSHMCGLSLHGRQAIPFLESLVVADVAALKDG 115
Query: 390 TGSLTVFTNDKGGAIDDSVVTKVNDHHVYLVVNAGCRDKDLAHIGAHMEAFQKKGGDVKW 569
TG+LTVFTND+GGAIDDSVVTKV D H+YLVVNAGCRDKDLAHIG HMEAF KKGGDVKW
Sbjct: 116 TGTLTVFTNDRGGAIDDSVVTKVTDQHIYLVVNAGCRDKDLAHIGEHMEAFNKKGGDVKW 175
Query: 570 HVHDERSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKMIDINGSACFLTRTGYTGEDGFE 749
HVHDERSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKMIDING ACFLTRTGYTGEDGFE
Sbjct: 176 HVHDERSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKMIDINGYACFLTRTGYTGEDGFE 235
Query: 750 ISVPSENAVDLAKALLEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHITPVEAGLSW 929
ISVPSENAVDLAKALLEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHITPVEAGLSW
Sbjct: 236 ISVPSENAVDLAKALLEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHITPVEAGLSW 295
Query: 930 AIGKRRRAEGGFLGAEVILKQLKEGPKIRRVGIFSQGPPPRSHSEIVSGAGENIGEVTSG 1109
AIGKRR+AEGGFLGA+VILKQL+EGPKIRRVG+ SQGPPPRSHSEIVS +GENIGEVTSG
Sbjct: 296 AIGKRRKAEGGFLGADVILKQLQEGPKIRRVGLLSQGPPPRSHSEIVSNSGENIGEVTSG 355
Query: 1110 GFSPCLKKNIAMGYVKNGLHKAGTEFKVVVRGKQYDAVVTKMPFVPTKYYK 1262
GFSPCLKKNIAMGYVK+GLHKAGTEFKVVVRGK YDAVVTKMPFVPTKYYK
Sbjct: 356 GFSPCLKKNIAMGYVKSGLHKAGTEFKVVVRGKSYDAVVTKMPFVPTKYYK 406
9631.m03557|protein putative protein kinase
Length = 675
Score = 90.5 bits (221), Expect = 7e-18
Identities = 62/197 (31%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Frame = +1
Query: 10 PSPTPPP*EASSRAPLWPAAPPPPPPRRPPPPRAATWPARRRWPRRSSRRRRCTTSTWRT 189
PSP+PPP + +P P PPPPPP PPPP A+ P + + P S+ ++
Sbjct: 33 PSPSPPPPPPTPSSPQRP--PPPPPPATPPPPPPAS-PGKNQSPASPSQDSPPPVASPSV 89
Query: 190 GARWYPSPAGACPSSTRTPSWTPPSTAAPTAASSTSPTCAASACRAARPSPSSSPSSSPT 369
+ P PA P S PS +PP + P SST P+ + P PS S ++
Sbjct: 90 SS---PPPAPTTPPSPPPPSKSPPPPSPPPTTSSTPPSHQSPPEEGTSPPPSPSSGATTP 146
Query: 370 SPPSRTAPAPSPSSPTTRAAPSTTPSSPRSTTTTSTSSSTPAA--GTRTSPTSAPTWRRS 543
SPP + S S+P A T+P +PR + T S P T+ P P
Sbjct: 147 SPPPNAQSSSSSSTPP--AGAGTSPPAPREMPSPGTPPSPPTTLITTQAPPIQPPPPPGG 204
Query: 544 RRRVATSSGTSTTSAPSSP 600
+ SS T+ ++ S P
Sbjct: 205 NSMIMPSSLTTAGTSQSPP 223
Score = 82.3 bits (200), Expect = 2e-15
Identities = 66/171 (38%), Positives = 84/171 (48%), Gaps = 8/171 (4%)
Frame = +1
Query: 4 PPPSPTPPP*EASSRAPLWPAAPPPPP----PRRPPPPRAATWPARRRWPRRSSRRRRCT 171
P P PP ++SS +P P+ PPPPP P+RPPPP PA P +S +
Sbjct: 17 PAGGPPEPPPQSSSASPS-PSPPPPPPTPSSPQRPPPPPP---PATPPPPPPASPGKN-- 70
Query: 172 TSTWRTGARWYPSPAGACPSSTRTPSWTPPSTAAPTAASSTSPTCAASACRAARPSP--- 342
SPA PS P PS ++P A +T P+ + PSP
Sbjct: 71 -----------QSPAS--PSQDSPPPVASPSVSSPPPAPTTPPSPPPPSKSPPPPSPPPT 117
Query: 343 -SSSPSSSPTSPPSRTAPAPSPSSPTTRAAPSTTPSSPRSTTTTSTSSSTPAAGTRTSP 516
SS+P S + P T+P PSPSS +TTPS P +S+SSSTP AG TSP
Sbjct: 118 TSSTPPSHQSPPEEGTSPPPSPSS------GATTPSPP-PNAQSSSSSSTPPAGAGTSP 169
Score = 69.9 bits (168), Expect = 1e-11
Identities = 56/171 (32%), Positives = 75/171 (43%), Gaps = 1/171 (0%)
Frame = +1
Query: 4 PPPSPTPPP*EASSRAPLWPAAPPPPPPRRPPPPRAATWPARRRWPRRSSRRRRCTTSTW 183
PPP+PT PP +P P+ PPPP PPP ++T P+ + P +
Sbjct: 92 PPPAPTTPP------SPPPPSKSPPPPS--PPPTTSSTPPSHQSPPEEGT---------- 133
Query: 184 RTGARWYPSPAGACPSSTRTPSWTPPSTAAPTAASSTSPTCAASACRAARPSPS-SSPSS 360
SP + S TPS PP A +++SST P A ++ A R PS +P S
Sbjct: 134 --------SPPPSPSSGATTPS--PPPNAQSSSSSSTPPAGAGTSPPAPREMPSPGTPPS 183
Query: 361 SPTSPPSRTAPAPSPSSPTTRAAPSTTPSSPRSTTTTSTSSSTPAAGTRTSP 516
PT+ + AP P P + P S TT TS S P A T +P
Sbjct: 184 PPTTLITTQAPPIQPPPP----PGGNSMIMPSSLTTAGTSQSPPDATTAGAP 231
9633.m00004|protein transposon protein, putative, CACTA, En/Spm
sub-class
Length = 601
Score = 79.6 bits (193), Expect = 1e-14
Identities = 59/175 (33%), Positives = 79/175 (44%)
Frame = +1
Query: 4 PPPSPTPPP*EASSRAPLWPAAPPPPPPRRPPPPRAATWPARRRWPRRSSRRRRCTTSTW 183
PPP+ P P S P A+PPPPPP PPPPR + P +
Sbjct: 59 PPPASPPLP----SATPPLAASPPPPPP--PPPPRNSPSPPKP----------------- 95
Query: 184 RTGARWYPSPAGACPSSTRTPSWTPPSTAAPTAASSTSPTCAASACRAARPSPSSSPSSS 363
PS A P T + TPP+ AP A++ PT PSP S+PS +
Sbjct: 96 -------PSQAAQSPLPPTTTTTTPPT--APVPAAAPPPTA---------PSPYSAPSPT 137
Query: 364 PTSPPSRTAPAPSPSSPTTRAAPSTTPSSPRSTTTTSTSSSTPAAGTRTSPTSAP 528
PT P+ T P PSP T A + + ++ +S SS+PAA RT+ +S+P
Sbjct: 138 PT--PTHTQPRPSPPLLPTPATAADPANPNKARHPSSNKSSSPAAPRRTNSSSSP 190
9630.m00367|protein transposon protein, putative, CACTA, En/Spm
sub-class
Length = 694
Score = 78.8 bits (191), Expect = 2e-14
Identities = 69/196 (35%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Frame = +1
Query: 7 PPSPTPPP*EASSRAPLWPAAPPPPPPRRPPPPRAATWPARRRWPRRSSRRRRCTTSTWR 186
PPS +P P S + +PA P P P PP +AT P+ P SS TT +
Sbjct: 417 PPSSSPTP-SYPSPSSSYPAPPGSNTPSYPSPPSSATTPSSHSPPGGSS----STTPS-- 469
Query: 187 TGARWYPSPAGACPSSTRTPSWTPPSTAAPT----AASSTSPTCAASACRAARPSPSSSP 354
YPSP G PS+ PS PP + P+ +SST+P+ + PS S P
Sbjct: 470 -----YPSPNGGKPSTPSHPS--PPGSTTPSYPSPPSSSTTPSYHSPPQGHTTPSHPSPP 522
Query: 355 SSSPTSPPSRTAPAPSPSSPTTRAAPST-TPSSPRST------------------TTTST 477
SSS T+PPS + P +P+ P+ + P T TP P S +T +
Sbjct: 523 SSS-TAPPSHSPPQSTPTHPSYPSPPVTYTPPPPTSADRPDVRFAPPPGSYGPIPSTPPS 581
Query: 478 SSSTPAAGTRTSPTSAPTWRRSRRRVATSSGTSTTSAPS 594
S S P+ + P S + +GT TT+ PS
Sbjct: 582 SGSPPSPSSGYQPPSGQPGASPPTQHVPGAGTPTTTPPS 620
Score = 69.9 bits (168), Expect = 1e-11
Identities = 63/186 (33%), Positives = 85/186 (44%), Gaps = 9/186 (4%)
Frame = +1
Query: 43 SRAPLWPAAPPPPPPRRPP-----PPRAATWPARRRWPRRSSRRRRCTTSTWRTGARWYP 207
S+A A+ P P P PP + P RRR P YP
Sbjct: 376 SKAQCQAASYTPTPGGSPGRGGQGPPAPVSSPPRRRGP--------------------YP 415
Query: 208 SPAGACPSSTRTPSWTPPSTAAPTAASSTSPTCAASACRAARPSPSSSPSSSPTSPPSRT 387
P PSS+ TPS+ PS++ P S +P+ + A PS S P S ++ PS
Sbjct: 416 QP----PSSSPTPSYPSPSSSYPAPPGSNTPSYPSPPSSATTPSSHSPPGGSSSTTPSYP 471
Query: 388 AP-APSPSSPTTRAAP-STTPS--SPRSTTTTSTSSSTPAAGTRTSPTSAPTWRRSRRRV 555
+P PS+P+ + P STTPS SP S++TT + S P T S S P+ S
Sbjct: 472 SPNGGKPSTPSHPSPPGSTTPSYPSPPSSSTTPSYHSPPQGHTTPSHPSPPS--SSTAPP 529
Query: 556 ATSSGTSTTSAPSSP 600
+ S ST + PS P
Sbjct: 530 SHSPPQSTPTHPSYP 544
Score = 68.7 bits (165), Expect = 3e-11
Identities = 58/173 (33%), Positives = 83/173 (47%), Gaps = 10/173 (5%)
Frame = +1
Query: 13 SPTPPP*EASSRAPLWPAAPPPPPPRR----PPPPRAATWPARRRWPRRSSRRRRCTTST 180
S TP P + R P AP PPRR P PP ++ P+
Sbjct: 384 SYTPTPGGSPGRGGQGPPAPVSSPPRRRGPYPQPPSSSPTPS------------------ 425
Query: 181 WRTGARWYPSPAGACPS--STRTPSW-TPPSTAAPTAASSTSPTCAASACRAARPSPSSS 351
YPSP+ + P+ + TPS+ +PPS+A T SS SP +S+ + PSP+
Sbjct: 426 -------YPSPSSSYPAPPGSNTPSYPSPPSSA--TTPSSHSPPGGSSSTTPSYPSPNGG 476
Query: 352 PSSSPT--SPP-SRTAPAPSPSSPTTRAAPSTTPSSPRSTTTTSTSSSTPAAGTRTSPTS 522
S+P+ SPP S T PSP S +T + + P + + S SS+ A + + P S
Sbjct: 477 KPSTPSHPSPPGSTTPSYPSPPSSSTTPSYHSPPQGHTTPSHPSPPSSSTAPPSHSPPQS 536
Query: 523 APT 531
PT
Sbjct: 537 TPT 539
9629.m00111|protein transposon protein, putative, CACTA, En/Spm
sub-class
Length = 698
Score = 76.9 bits (186), Expect = 9e-14
Identities = 65/199 (32%), Positives = 87/199 (43%), Gaps = 3/199 (1%)
Frame = +1
Query: 1 LPPPSPTPPP*EASSRAPLWPAA---PPPPPPRRPPPPRAATWPARRRWPRRSSRRRRCT 171
+PPP+ PPP + P P+A PP PP P PP AT P P+ S ++
Sbjct: 75 VPPPATVPPPPVPVASPPPTPSATLPPPSPPASVPVPPTPATTP-----PKPSPVQQPPV 129
Query: 172 TSTWRTGARWYPSPAGACPSSTRTPSWTPPSTAAPTAASSTSPTCAASACRAARPSPSSS 351
++ SPA P + S TPP +P SP + A PSPS S
Sbjct: 130 AASPPPS-----SPADLPPPNPPARSDTPPVVQSPPPPHRRSPRTPWAPPMA--PSPSGS 182
Query: 352 PSSSPTSPPSRTAPAPSPSSPTTRAAPSTTPSSPRSTTTTSTSSSTPAAGTRTSPTSAPT 531
P+ + PS A P +P ++P TPS+P S T T S+ P +G SP +AP
Sbjct: 183 PTKPSPASPSPIAGDPIIPTPNNPSSPLATPSAPGSGTPVVTPSA-PVSGP-PSPGTAPA 240
Query: 532 WRRSRRRVATSSGTSTTSAPSS 597
R + S T S SS
Sbjct: 241 TAADRSNKSLSPNTQDGSVSSS 262
Score = 67.1 bits (161), Expect = 8e-11
Identities = 64/199 (32%), Positives = 84/199 (42%), Gaps = 8/199 (4%)
Frame = +1
Query: 1 LPPPSPTPPP*EASSRAPLWPAAPPPPPPRRP---PPPRAATWPARRRWPRRSSRRRRCT 171
+ PP+ +PP A++ P + PP PPP P PPP P P +
Sbjct: 41 ITPPAASPPLPSAATPPPQPDSPPPSPPPAPPVAVPPPATVPPP-----PVPVASPPPTP 95
Query: 172 TSTWRTGARWYPSPAGACPSSTRTPSWTPPSTA---APTAASSTSPTCAASACRAARPSP 342
++T PSP + P TP+ TPP + P A+S P+ A P
Sbjct: 96 SATLPP-----PSPPASVPVPP-TPATTPPKPSPVQQPPVAASPPPSSPADL------PP 143
Query: 343 SSSPSSSPTSPPSRTAPAPSPSSPTTRAAPSTTPSSPRSTTTTSTSSSTPAAGTRTSPTS 522
+ P+ S T P ++ P P SP T AP PS S T S +S +P AG PT
Sbjct: 144 PNPPARSDTPPVVQSPPPPHRRSPRTPWAPPMAPSPSGSPTKPSPASPSPIAGDPIIPTP 203
Query: 523 APTWRRSRRRVATSSGTS--TTSAPSS 597
A SGT T SAP S
Sbjct: 204 NNPSSPLATPSAPGSGTPVVTPSAPVS 230
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121895349
Number of Sequences: 59712
Number of extensions: 4831986
Number of successful extensions: 174227
Number of sequences better than 1.0e-10: 30
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 171617
Number of HSP's gapped (non-prelim): 420
length of query: 517
length of database: 26,991,925
effective HSP length: 52
effective length of query: 464
effective length of database: 23,886,901
effective search space: 11083522064
effective search space used: 11083522064
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG600 Members:23 3pri:Y 3e-92
A35275 carboxypeptidase C (EC 3.4.16.5) - barley
(1933 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9630.m00134|protein serine carboxypeptidase iii precursor... 889 0.0
9635.m02886|protein Serine carboxypeptidase, putative 698 0.0
9633.m00589|protein serine carboxypeptidase II-like protein 189 1e-47
9629.m02211|protein Serine carboxypeptidase 187 6e-47
9633.m04764|protein Serine carboxypeptidase 186 1e-46
9629.m02212|protein Serine carboxypeptidase 185 2e-46
9629.m01124|protein Serine carboxypeptidase 181 4e-45
9631.m02651|protein probable serine carboxypeptidase II [... 177 5e-44
9629.m04229|protein Serine carboxypeptidase 174 6e-43
9632.m02396|protein serine carboxypeptidase i precursor (... 168 4e-41
9634.m05001|protein serine carboxypeptidase II-like protein 168 4e-41
9633.m04762|protein Serine carboxypeptidase 166 1e-40
9632.m00842|protein Serine carboxypeptidase 164 5e-40
9632.m03105|protein Serine carboxypeptidase 162 2e-39
9639.m02167|protein carboxypeptidase, putative 161 4e-39
9629.m02207|protein Serine carboxypeptidase, putative 161 4e-39
9635.m04658|protein Serine carboxypeptidase 161 4e-39
9634.m00816|protein serine carboxypeptidase ii-2 precurso... 161 5e-39
9640.m01504|protein serine carboxypeptidase i precursor (... 151 3e-36
9631.m00868|protein probable serine carboxypeptidase II [... 150 6e-36
9630.m00134|protein serine carboxypeptidase iii precursor (ec
3.4.16.5).
Length = 500
Score = 889 bits (2273), Expect = 0.0
Identities = 433/501 (86%), Positives = 460/501 (91%), Gaps = 7/501 (1%)
Frame = +3
Query: 162 VSLLLLLALCAAAAGA--LRLPPDASFPGAQAERLIRALNLLPKDSSSSSGRHGARVGAG 335
VSL+LL+ + AA+A A LRLP DA FP AQAERLIR+LNLLPK++ + GAG
Sbjct: 6 VSLILLVVVLAASACAEGLRLPRDAKFPAAQAERLIRSLNLLPKEAGPT--------GAG 57
Query: 336 K-EDVAPGQLLERRVTLPGLPEGVADLGHHAGYYRLPNTHDARMFYFFFESRGKKEDPVV 512
VAPG+LLERRVTLPGLP+GV DLGHHAGYYRLPNTHDARMFYF FESRGKKEDPVV
Sbjct: 58 DVPSVAPGELLERRVTLPGLPQGVGDLGHHAGYYRLPNTHDARMFYFLFESRGKKEDPVV 117
Query: 513 IWLTGGPGCSSELAVFYENGPFTIANNMSLVWNKFGWDKISNIIFVDQPTGTGFSYSSDD 692
IWLTGGPGCSSELAVFYENGPFTI+NNMSL WNKFGWD ISNIIFVDQPTGTGFSYSSDD
Sbjct: 118 IWLTGGPGCSSELAVFYENGPFTISNNMSLAWNKFGWDTISNIIFVDQPTGTGFSYSSDD 177
Query: 693 RDTRHDETGVSNDLYDFLQVFFKKHPEFIKNDFFITGESYAGHYIPAFASRVHQGNKKNE 872
RDTRHDETGVSNDLY FLQVFFKKHPEF KNDFFITGESYAGHYIPAFASRVHQGNK NE
Sbjct: 178 RDTRHDETGVSNDLYSFLQVFFKKHPEFAKNDFFITGESYAGHYIPAFASRVHQGNKANE 237
Query: 873 GTHINLKGFAIGNGLTDPAIQYKAYTDYALEMNLIQKADYERINKFIPPCEFAIKLCGTN 1052
G HINLKGFAIGNGLTDPAIQYKAYTDYAL+MNLI+K+DY+RINKFIPPCEFAIKLCGTN
Sbjct: 238 GIHINLKGFAIGNGLTDPAIQYKAYTDYALDMNLIKKSDYDRINKFIPPCEFAIKLCGTN 297
Query: 1053 GKASCMAAYMVCNTIFNSIMKLVGTKNYYDVRKECEGKLCYDFSNLEKFFGDKAVRQAIG 1232
GKASCMAAYMVCN+IF+SIMKLVGTKNYYDVRKECEGKLCYDFSNLEKFFGDKAV++AIG
Sbjct: 298 GKASCMAAYMVCNSIFSSIMKLVGTKNYYDVRKECEGKLCYDFSNLEKFFGDKAVKEAIG 357
Query: 1233 VGDIEFVSCSTSVYQAMLTDWMRNLEVGIPALLEDGINVLIYAGEYDLICNWLGNSRWVH 1412
VGD+EFVSCST+VYQAMLTDWMRNLEVGIPALLEDGINVLIYAGEYDLICNWLGNSRWVH
Sbjct: 358 VGDLEFVSCSTTVYQAMLTDWMRNLEVGIPALLEDGINVLIYAGEYDLICNWLGNSRWVH 417
Query: 1413 SMEWSGQKDFAKTAESSFLVDDAQAGVLKSHGALSFLKVHNAGHMVPMDQPKAALEMLRR 1592
SMEWSGQKDF + ES F+VD A+AGVLKSHG LSFLKVHNAGHMVPMDQPKA+LEMLRR
Sbjct: 418 SMEWSGQKDFVSSHESPFVVDGAEAGVLKSHGPLSFLKVHNAGHMVPMDQPKASLEMLRR 477
Query: 1593 FTQGKLKE----AVPEEESSTTSFYAAM 1664
FTQGKLKE +PE+ YAAM
Sbjct: 478 FTQGKLKEEWLAELPEQ-----PMYAAM 500
9635.m02886|protein Serine carboxypeptidase, putative
Length = 524
Score = 698 bits (1782), Expect = 0.0
Identities = 345/493 (69%), Positives = 396/493 (79%), Gaps = 26/493 (5%)
Frame = +3
Query: 141 MATTPRLVSLLLLLALCAAAAGA-----------LRLP-------PDASFPGAQAERLIR 266
M T + SLLL L AAA A LRLP P P + A LIR
Sbjct: 1 MGPTRQSHSLLLTFLLVGAAAAAAAASPEDGSPFLRLPTASDLPVPAGQLPRSAAVGLIR 60
Query: 267 ALNLLPKDSSSSSGRHGARVGAGKEDVAPGQLLERRVTLPGLPEGVA------DLGHHAG 428
ALNL P+D+S S G DV G L+ER + L + G + DLGHHAG
Sbjct: 61 ALNLHPRDASPSPSSRG------DGDVPAGTLVERPIHLASMATGKSGGSSAEDLGHHAG 114
Query: 429 YYRLPNTHDARMFYFFFESRGKK--EDPVVIWLTGGPGCSSELAVFYENGPFTIANNMSL 602
YYRLPNTHDAR+FYFFFESRG K +DPVVIWLTGGPGCSSELA+FYENGPF IA+NMSL
Sbjct: 115 YYRLPNTHDARLFYFFFESRGSKGEDDPVVIWLTGGPGCSSELALFYENGPFHIADNMSL 174
Query: 603 VWNKFGWDKISNIIFVDQPTGTGFSYSSDDRDTRHDETGVSNDLYDFLQVFFKKHPEFIK 782
VWN FGWD+ SN+I+VDQPTGTGFSYSS+ RDTRHDE GVSNDLY FLQ FF +HP F K
Sbjct: 175 VWNDFGWDQESNLIYVDQPTGTGFSYSSNPRDTRHDEAGVSNDLYAFLQAFFTEHPNFAK 234
Query: 783 NDFFITGESYAGHYIPAFASRVHQGNKKNEGTHINLKGFAIGNGLTDPAIQYKAYTDYAL 962
NDF+ITGESYAGHYIPAFASRV++GNK +EG HINLKGFAIGNGLTDPAIQYKAYTDY+L
Sbjct: 235 NDFYITGESYAGHYIPAFASRVYKGNKNSEGIHINLKGFAIGNGLTDPAIQYKAYTDYSL 294
Query: 963 EMNLIQKADYERINKFIPPCEFAIKLCGTNGKASCMAAYMVCNTIFNSIMKLVGTKNYYD 1142
+M LI K+ + RINK +P CE AIKLCGT+G SC+ AY+VCN IF+SI ++G KNYYD
Sbjct: 295 DMGLITKSQFNRINKIVPTCELAIKLCGTSGTISCLGAYVVCNLIFSSIETIIGKKNYYD 354
Query: 1143 VRKECEGKLCYDFSNLEKFFGDKAVRQAIGVGDIEFVSCSTSVYQAMLTDWMRNLEVGIP 1322
+RK C G LCYD SN+EKF K+VR+++GVGDI+FVSCS +VYQAML DWMRNLEVGIP
Sbjct: 355 IRKPCVGSLCYDLSNMEKFLQLKSVRESLGVGDIQFVSCSPTVYQAMLLDWMRNLEVGIP 414
Query: 1323 ALLEDGINVLIYAGEYDLICNWLGNSRWVHSMEWSGQKDFAKTAESSFLVDDAQAGVLKS 1502
LLE+ I VLIYAGEYDLICNWLGNSRWV+SMEWSG++ F ++E F VD +AG+LKS
Sbjct: 415 ELLENDIKVLIYAGEYDLICNWLGNSRWVNSMEWSGKEAFVSSSEEPFTVDGKEAGILKS 474
Query: 1503 HGALSFLKVHNAGHMVPMDQPKAALEMLRRFTQGKLKEA 1619
+G LSFLKVH+AGHMVPMDQPK ALEML R+T G L A
Sbjct: 475 YGPLSFLKVHDAGHMVPMDQPKVALEMLMRWTSGNLSNA 513
9633.m00589|protein serine carboxypeptidase II-like protein
Length = 482
Score = 189 bits (475), Expect = 1e-47
Identities = 138/438 (31%), Positives = 224/438 (50%), Gaps = 35/438 (7%)
Frame = +3
Query: 294 SSSSGRHGARVGAGKEDVAPGQLLERRVTLPGLPEGVADLGHHAGYYRLPNTHDARMFYF 473
SSS G G G+++ +R LPG P A + AGY + H +FY+
Sbjct: 24 SSSMAATGGGGGGGEQEA------DRVARLPGQPASPA-VSQFAGYVGVDERHGRALFYW 76
Query: 474 FFESRGK---KEDPVVIWLTGGPGCSS-ELAVFYENGPFTIANN-MSLVWNKFGWDKISN 638
FFE++ ++ P+++WL GGPGCSS E GP +A +L +N++GW+K +N
Sbjct: 77 FFEAQASPAPEKKPLLLWLNGGPGCSSIGYGAASELGPLRVARQGAALEFNQYGWNKEAN 136
Query: 639 IIFVDQPTGTGFSYSSDDRDTRH-DETGVSNDLYDFLQVFFKKHPEFIKNDFFITGESYA 815
++F++ P G GFSY++ D + ++ V+ D Y FL +FK+ P++ N+F+I+GESYA
Sbjct: 137 LLFLESPVGVGFSYTNTSSDLSNLNDDFVAEDAYSFLVNWFKRFPQYKDNEFYISGESYA 196
Query: 816 GHYIPAFASRVHQGNK-KNEGTHINLKGFAIGNGLTDPAIQYKAYTDYALEMNLIQKADY 992
GHY+P A V++ NK K T+INLKGF +GN LTD K +YA ++ Y
Sbjct: 197 GHYVPQLADLVYERNKDKRASTYINLKGFIVGNPLTDDYYDSKGLAEYAWSHAIVSDQVY 256
Query: 993 ERINKFIPPCEFAIKLCGTNGKASCMAAYMVCNTIFNSI--------------------M 1112
ERI K C F +N C AA + + +N I
Sbjct: 257 ERIKK---TCNFK----NSNWTDDCNAAMNIIFSQYNQIDIYNIYAPKCLLNSTSASSPD 309
Query: 1113 KLVGTKNYYDVRKECEGKLCYD---FSNLEKFFGDKAVRQAI-----GVGDIEFVSCSTS 1268
+ N R + YD S E +F V++A G+ ++ CS
Sbjct: 310 RAFFANNQEQFRWRIKMFSGYDPCYSSYAEDYFNKHDVQEAFHANASGLLPGKWQVCSDQ 369
Query: 1269 VYQAMLTDWMRNLEVGIPALLEDGINVLIYAGEYDLICNWLGNSRWVHSMEWSGQKDFAK 1448
+ + + L + L++ G+ V +Y+G+ D + + V ++ K
Sbjct: 370 ILNSYNFSVLSILPI-YSKLIKAGLRVWLYSGDADGRVPVISSRYCVEALGLP-----IK 423
Query: 1449 TAESSFLVDDAQAGVLKSHGALSFLKVHNAGHMVPMDQPKAALEMLRRFTQGK 1607
T S+ +D AG + ++ + V AGH+VP+++P L ++ F G+
Sbjct: 424 TDWQSWYLDKQVAGRFVEYHGMTMVTVRGAGHLVPLNKPAEGLMLINAFLHGE 476
9629.m02211|protein Serine carboxypeptidase
Length = 480
Score = 187 bits (470), Expect = 6e-47
Identities = 126/417 (30%), Positives = 219/417 (52%), Gaps = 32/417 (7%)
Frame = +3
Query: 357 QLLERRVTLPGLPEGVADLGHHAGYYRLPNTHDARMFYFFFESRG-KKEDPVVIWLTGGP 533
Q +R LPG P + +GY + + + +FY+FFE++ + P+++WL GGP
Sbjct: 36 QEADRVAFLPGQPRS-PQMSQFSGYITVNSQNGRALFYWFFEAQALPSKKPLLLWLNGGP 94
Query: 534 GCSSE-LAVFYENGPFTI-ANNMSLVWNKFGWDKISNIIFVDQPTGTGFSYSSDDRDTRH 707
GCSS E GP + N L +NKF W+ +N++F++ P G GFSY++ D
Sbjct: 95 GCSSVGYGAASELGPLMVNGNGTGLEFNKFAWNNEANLLFLESPVGVGFSYTNTSSDLES 154
Query: 708 -DETGVSNDLYDFLQVFFKKHPEFIKNDFFITGESYAGHYIPAFASRVHQGNKKNE-GTH 881
D+ V+ D Y+FL +FK+ P++ +DF+I+GESYAGHY+P A V++ NK E H
Sbjct: 155 IDDRFVAEDTYNFLVNWFKRFPQYKNHDFYISGESYAGHYVPQLADVVYERNKHVETNQH 214
Query: 882 INLKGFAIGNGLTDPAIQYKAYTDYALEMNLIQKADYERINKFIPPCEFAIKLCGTNGKA 1061
INLKGF +GN TD YK ++A ++I Y+ +N C+F +L + +
Sbjct: 215 INLKGFIVGNAETDDYYDYKGLVEFAWSHSVISDQLYKHVNNV---CDF--RLSPRSNEC 269
Query: 1062 SCMAAYMV---------------CNTIFNSIMKLVGTKNYYDVRKECEGKLCYD------ 1178
+ + Y+ CNT +S+ + + +K +G Y
Sbjct: 270 NHVMGYIYDQYDMIDIFNVYAPKCNTDDSSLFSTSYSTADMNAKKRLKGTRMYSGYDPCY 329
Query: 1179 FSNLEKFFGDKAVRQAIG------VGDIEFVSCSTSVYQAMLTDWMRNLEVGIPALLEDG 1340
S++E + V++++ + D ++ CS S++ L + L++ G
Sbjct: 330 SSHIEDYMNKMDVQKSLHANTSGLIKDRKWSICSYSIFDNYDITVFSVLPI-YSKLIKAG 388
Query: 1341 INVLIYAGEYDLICNWLGNSRWVHSMEWSGQKDFAKTAESSFLVDDAQAGVLKSHGALSF 1520
+ + +Y+G+ D +G+ V ++ K+ + +++ AG + L+
Sbjct: 389 LRIWVYSGDVDGRVPVIGSRYCVEALGLP-----VKSQWQPWYLNNQVAGRFVEYQGLTM 443
Query: 1521 LKVHNAGHMVPMDQPKAALEMLRRFTQGK 1607
V AGH VP D+P+ AL ++ F G+
Sbjct: 444 ATVRGAGHAVPQDKPEQALVVINSFLSGR 472
9633.m04764|protein Serine carboxypeptidase
Length = 442
Score = 186 bits (468), Expect = 1e-46
Identities = 130/389 (33%), Positives = 198/389 (50%), Gaps = 10/389 (2%)
Frame = +3
Query: 420 HAGYYRLPNTHDARMFYFFFESRGK----KEDPVVIWLTGGPGCSSELAVFYENGPFTIA 587
++GY + T+ A +F+ ++E+ P+++WL GGPGCS F+E GP+ +
Sbjct: 39 NSGYLPITTTN-ASLFFAYYEATHPLTPPASTPLLLWLQGGPGCSGLAGNFFELGPYFVN 97
Query: 588 NN-MSLVWNKFGWDKISNIIFVDQPTGTGFSYSSDDRDTRHDETGVSNDLYDFLQVFFKK 764
+ +SL N F W++ ++F+D P GTGFS + +++ V+ L+ LQ FF
Sbjct: 98 RDALSLSPNPFSWNRRFGLLFIDNPLGTGFSAAPSPAAIPTNQSVVAAHLFAALQSFFAL 157
Query: 765 HPEFIKNDFFITGESYAGHYIPAFASRVHQGNKK-NEGTHINLKGFAIGNGLTDPAIQYK 941
P FF+TGESYAG YIPA S + N +NL G AIGNGLT P Q
Sbjct: 158 QPGSRSRPFFLTGESYAGKYIPAAGSYILAVNPTLPTRLRVNLHGVAIGNGLTHPVAQVA 217
Query: 942 AYTDYALEMNLI---QKADYERINKFIPPCEFAIKLCGTNGKASCMAAYMVCNTIFNSIM 1112
+ D A M LI QK + E + A++L TN A A + + +
Sbjct: 218 THADTAYFMGLINAKQKRELEALQ------ARAVEL--TNA-ARWSEAADARGLVLSWLE 268
Query: 1113 KLVGTKNYYDVRKECEGKLCYDFSNLEKFFGDKAVRQAIGV-GDIEFVSCSTSVYQAMLT 1289
G +D K K Y+ + KF V+ A+G GD+E+ CS +V AM
Sbjct: 269 NATGLATLFDAAK----KRPYETGPVGKFVNRAEVKAALGARGDVEWEECSDAVGAAMHG 324
Query: 1290 DWMRNLEVGIPALLEDGINVLIYAGEYDLICNWLGNSRWVHSMEWSGQKDFAKTAESSFL 1469
D M++++ + ALL G VL+Y G DL + W+ +EW G F + +
Sbjct: 325 DVMKSVKPEVEALLR-GTRVLLYQGIRDLRDGVVSTEAWMRELEWDGLPAFLDADRAVWR 383
Query: 1470 VDDAQAGVLKSHGALSFLKVHNAGHMVPMDQPKAALEML 1586
+ + AG ++ G LS + V+ AGH++P D +AA EM+
Sbjct: 384 IGEELAGYVQRSGPLSHVVVYGAGHLMPADNGRAAQEMI 422
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135598241
Number of Sequences: 59712
Number of extensions: 4570198
Number of successful extensions: 80166
Number of sequences better than 1.0e-10: 76
Number of HSP's better than 0.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 79920
Number of HSP's gapped (non-prelim): 114
length of query: 644
length of database: 26,991,925
effective HSP length: 53
effective length of query: 590
effective length of database: 23,827,189
effective search space: 14058041510
effective search space used: 14058041510
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 161 (67.1 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG602 Members:17 3pri:Y 1e-123
P31924 Sucrose synthase 2 (Sucrose-UDP glucosyltransferase
2) emb|CAA41774.1| sucrose-UDP glucosyltransferase (isoenz
(1631 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m02804|protein sucrose-UDP glucosyltransferase 2 894 0.0
9635.m04256|protein Sucrose synthase, putative 846 0.0
9634.m00901|protein sucrose synthase (EC 2.4.1.13) 1 - rice 776 0.0
9634.m00900|protein sucrose synthase (EC 2.4.1.13) 1 - rice 776 0.0
9634.m00899|protein sucrose synthase (EC 2.4.1.13) 1 - rice 776 0.0
9634.m00898|protein sucrose synthase (EC 2.4.1.13) 1 - rice 776 0.0
9631.m02214|protein sucrose synthase 3 674 0.0
9631.m02215|protein sucrose synthase 3 674 0.0
9630.m05839|protein Sucrose synthase, putative 548 e-156
9632.m01596|protein Sucrose synthase, putative 505 e-142
9632.m02280|protein Sucrose synthase, putative 503 e-142
9629.m06860|protein glycosyl transferase, group 1 family ... 125 2e-28
9636.m02033|protein sucrose-phosphate synthase 1 (ec 2.4.... 124 5e-28
9636.m02032|protein sucrose-phosphate synthase 1 (ec 2.4.... 124 5e-28
9634.m04216|protein sucrose-phosphate synthase 124 5e-28
9630.m00828|protein sucrose-phosphate synthase 123 6e-28
9630.m00829|protein sucrose-phosphate synthase 123 6e-28
9634.m00988|protein hypothetical protein 68 6e-11
9631.m02804|protein sucrose-UDP glucosyltransferase 2
Length = 816
Score = 894 bits (2285), Expect = 0.0
Identities = 422/440 (95%), Positives = 436/440 (98%)
Frame = +2
Query: 2 GIVRKWISRFEVWPYLETFTEDVAHEISGELQANPDLIIGNYSDGNLVACLLAHKMGVTH 181
GIVRKWISRFEVWPYLETFT+DVAHEI+GELQANPDLIIGNYSDGNLVACLLAHKMGVTH
Sbjct: 377 GIVRKWISRFEVWPYLETFTDDVAHEIAGELQANPDLIIGNYSDGNLVACLLAHKMGVTH 436
Query: 182 CTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQEIAGNKDTV 361
CTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQEIAGNKDTV
Sbjct: 437 CTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQEIAGNKDTV 496
Query: 362 GQYESHMAFTMPGMYRVVHGIDVFDPKFNIVSPGADMSIYFPYSESQRRLTSLHPEIEEL 541
GQYESHMAFTMPG+YRVVHGIDVFDPKFNIVSPGADMSIYFPYSES++RLTSLHPEIEEL
Sbjct: 497 GQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSESRKRLTSLHPEIEEL 556
Query: 542 LYSNVDNNEHKYVLKDRNKPIIFSMARLDRVKNLTGLVELYGKNPRLQELVNLVVVCGDH 721
LYS VDNNEHK++LKDRNKPIIFSMARLDRVKNLTGLVELYG+NPRLQELVNLVVVCGDH
Sbjct: 557 LYSEVDNNEHKFMLKDRNKPIIFSMARLDRVKNLTGLVELYGRNPRLQELVNLVVVCGDH 616
Query: 722 GNPSKDKEEQAEFKKMFDLIEQYNLNGHVRWISAQMNRVRNAELYRYICDTKGAFVQPAF 901
GNPSKDKEEQAEFKKMFDLIEQYNLNGH+RWISAQMNRVRN ELYRYICDTKGAFVQPAF
Sbjct: 617 GNPSKDKEEQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAF 676
Query: 902 YEAFGLTVIEAMTCGLPTFATAYGGPAEIIVNGVSGYHIDPYQGDKASALLVEFFEKCEV 1081
YEAFGLTV+E+MTCGLPTFATAYGGPAEIIVNGVSG+HIDPYQGDKASALLVEFFEKC+
Sbjct: 677 YEAFGLTVVESMTCGLPTFATAYGGPAEIIVNGVSGFHIDPYQGDKASALLVEFFEKCQE 736
Query: 1082 DPSHWTKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYAL 1261
DPSHWTKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYAL
Sbjct: 737 DPSHWTKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYAL 796
Query: 1262 KYRTMASTVPLAVEGESSSK 1321
KYRTMASTVPLAVEGE S+K
Sbjct: 797 KYRTMASTVPLAVEGEPSNK 816
9635.m04256|protein Sucrose synthase, putative
Length = 816
Score = 846 bits (2161), Expect = 0.0
Identities = 397/440 (90%), Positives = 424/440 (96%)
Frame = +2
Query: 2 GIVRKWISRFEVWPYLETFTEDVAHEISGELQANPDLIIGNYSDGNLVACLLAHKMGVTH 181
G VRKWISRFEVWPYLET+T+DVAHEISGELQA PDLIIGNYSDGNLVACLLAHK+GVTH
Sbjct: 377 GTVRKWISRFEVWPYLETYTDDVAHEISGELQATPDLIIGNYSDGNLVACLLAHKLGVTH 436
Query: 182 CTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQEIAGNKDTV 361
CTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFT DLIAMNHADFIITSTFQEIAGNK+TV
Sbjct: 437 CTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTADLIAMNHADFIITSTFQEIAGNKETV 496
Query: 362 GQYESHMAFTMPGMYRVVHGIDVFDPKFNIVSPGADMSIYFPYSESQRRLTSLHPEIEEL 541
GQYESHMAFTMPG+YRVVHGIDVFDPKFNIVSPGADMSIYFP++ESQ+RLTSLH EIEEL
Sbjct: 497 GQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPFTESQKRLTSLHLEIEEL 556
Query: 542 LYSNVDNNEHKYVLKDRNKPIIFSMARLDRVKNLTGLVELYGKNPRLQELVNLVVVCGDH 721
L+S+V+N EHK+VLKD+ KPIIFSMARLD VKNLTGLVELYG+NPRLQELVNLVVVCGDH
Sbjct: 557 LFSDVENTEHKFVLKDKKKPIIFSMARLDHVKNLTGLVELYGRNPRLQELVNLVVVCGDH 616
Query: 722 GNPSKDKEEQAEFKKMFDLIEQYNLNGHVRWISAQMNRVRNAELYRYICDTKGAFVQPAF 901
G SKDKEEQAEFKKMF+LIEQYNLNGH+RWISAQMNRVRN ELYRYICD +GAFVQPA
Sbjct: 617 GKESKDKEEQAEFKKMFNLIEQYNLNGHIRWISAQMNRVRNGELYRYICDMRGAFVQPAL 676
Query: 902 YEAFGLTVIEAMTCGLPTFATAYGGPAEIIVNGVSGYHIDPYQGDKASALLVEFFEKCEV 1081
YEAFGLTVIEAMTCGLPTFATAYGGPAEIIV+GVSGYHIDPYQ DKASALLVEFFEKC+
Sbjct: 677 YEAFGLTVIEAMTCGLPTFATAYGGPAEIIVHGVSGYHIDPYQNDKASALLVEFFEKCQE 736
Query: 1082 DPSHWTKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYAL 1261
DP+HW KISQGGLQRIEEKYTWKLYSERLMTL+GVYGFWKYV+NL+RRETRRYLEMLYAL
Sbjct: 737 DPNHWIKISQGGLQRIEEKYTWKLYSERLMTLSGVYGFWKYVTNLDRRETRRYLEMLYAL 796
Query: 1262 KYRTMASTVPLAVEGESSSK 1321
KYR MA+TVPLA+EGE+S+K
Sbjct: 797 KYRKMATTVPLAIEGEASTK 816
9634.m00901|protein sucrose synthase (EC 2.4.1.13) 1 - rice
Length = 808
Score = 776 bits (1981), Expect = 0.0
Identities = 360/440 (81%), Positives = 403/440 (90%)
Frame = +2
Query: 2 GIVRKWISRFEVWPYLETFTEDVAHEISGELQANPDLIIGNYSDGNLVACLLAHKMGVTH 181
GI+RKWISRF+VWP+LET+TEDVA+EI E+QA PDLIIGNYSDGNLVA LLAHK+GVT
Sbjct: 369 GILRKWISRFDVWPFLETYTEDVANEIMREMQAKPDLIIGNYSDGNLVATLLAHKLGVTQ 428
Query: 182 CTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQEIAGNKDTV 361
CTIAHALEKTKYPNSD+Y KF+ YHFSCQFT DLIAMNH DFIITSTFQEIAG+KDTV
Sbjct: 429 CTIAHALEKTKYPNSDIYLDKFDSQYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTV 488
Query: 362 GQYESHMAFTMPGMYRVVHGIDVFDPKFNIVSPGADMSIYFPYSESQRRLTSLHPEIEEL 541
GQYESH+AFT+PG+YRVVHGIDVFDPKFNIVSPGADMS+YFPY+E+ +RLT+ HPEIEEL
Sbjct: 489 GQYESHIAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSVYFPYTEADKRLTAFHPEIEEL 548
Query: 542 LYSNVDNNEHKYVLKDRNKPIIFSMARLDRVKNLTGLVELYGKNPRLQELVNLVVVCGDH 721
LYS V+N+EHK+VLKD+NKPIIFSMARLDRVKN+TGLVE+YGKN L++L NLV+VCGDH
Sbjct: 549 LYSEVENDEHKFVLKDKNKPIIFSMARLDRVKNMTGLVEMYGKNAHLRDLANLVIVCGDH 608
Query: 722 GNPSKDKEEQAEFKKMFDLIEQYNLNGHVRWISAQMNRVRNAELYRYICDTKGAFVQPAF 901
GN SKD+EEQAEFKKM+ LI+QY L GH+RWISAQMNRVRN ELYRYICDTKG FVQPAF
Sbjct: 609 GNQSKDREEQAEFKKMYGLIDQYKLKGHIRWISAQMNRVRNGELYRYICDTKGVFVQPAF 668
Query: 902 YEAFGLTVIEAMTCGLPTFATAYGGPAEIIVNGVSGYHIDPYQGDKASALLVEFFEKCEV 1081
YEAFGLTVIEAMTCGLPT AT +GGPAEIIV+GVSG HIDPY DKA+ +LV FFEKC+
Sbjct: 669 YEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFEKCKQ 728
Query: 1082 DPSHWTKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYAL 1261
D ++W ISQGGLQRI EKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRY+EM YAL
Sbjct: 729 DSTYWDNISQGGLQRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYAL 788
Query: 1262 KYRTMASTVPLAVEGESSSK 1321
KYR++AS VPLAV+GES+SK
Sbjct: 789 KYRSLASAVPLAVDGESTSK 808
9634.m00900|protein sucrose synthase (EC 2.4.1.13) 1 - rice
Length = 808
Score = 776 bits (1981), Expect = 0.0
Identities = 360/440 (81%), Positives = 403/440 (90%)
Frame = +2
Query: 2 GIVRKWISRFEVWPYLETFTEDVAHEISGELQANPDLIIGNYSDGNLVACLLAHKMGVTH 181
GI+RKWISRF+VWP+LET+TEDVA+EI E+QA PDLIIGNYSDGNLVA LLAHK+GVT
Sbjct: 369 GILRKWISRFDVWPFLETYTEDVANEIMREMQAKPDLIIGNYSDGNLVATLLAHKLGVTQ 428
Query: 182 CTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQEIAGNKDTV 361
CTIAHALEKTKYPNSD+Y KF+ YHFSCQFT DLIAMNH DFIITSTFQEIAG+KDTV
Sbjct: 429 CTIAHALEKTKYPNSDIYLDKFDSQYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTV 488
Query: 362 GQYESHMAFTMPGMYRVVHGIDVFDPKFNIVSPGADMSIYFPYSESQRRLTSLHPEIEEL 541
GQYESH+AFT+PG+YRVVHGIDVFDPKFNIVSPGADMS+YFPY+E+ +RLT+ HPEIEEL
Sbjct: 489 GQYESHIAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSVYFPYTEADKRLTAFHPEIEEL 548
Query: 542 LYSNVDNNEHKYVLKDRNKPIIFSMARLDRVKNLTGLVELYGKNPRLQELVNLVVVCGDH 721
LYS V+N+EHK+VLKD+NKPIIFSMARLDRVKN+TGLVE+YGKN L++L NLV+VCGDH
Sbjct: 549 LYSEVENDEHKFVLKDKNKPIIFSMARLDRVKNMTGLVEMYGKNAHLRDLANLVIVCGDH 608
Query: 722 GNPSKDKEEQAEFKKMFDLIEQYNLNGHVRWISAQMNRVRNAELYRYICDTKGAFVQPAF 901
GN SKD+EEQAEFKKM+ LI+QY L GH+RWISAQMNRVRN ELYRYICDTKG FVQPAF
Sbjct: 609 GNQSKDREEQAEFKKMYGLIDQYKLKGHIRWISAQMNRVRNGELYRYICDTKGVFVQPAF 668
Query: 902 YEAFGLTVIEAMTCGLPTFATAYGGPAEIIVNGVSGYHIDPYQGDKASALLVEFFEKCEV 1081
YEAFGLTVIEAMTCGLPT AT +GGPAEIIV+GVSG HIDPY DKA+ +LV FFEKC+
Sbjct: 669 YEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFEKCKQ 728
Query: 1082 DPSHWTKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYAL 1261
D ++W ISQGGLQRI EKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRY+EM YAL
Sbjct: 729 DSTYWDNISQGGLQRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYAL 788
Query: 1262 KYRTMASTVPLAVEGESSSK 1321
KYR++AS VPLAV+GES+SK
Sbjct: 789 KYRSLASAVPLAVDGESTSK 808
9634.m00899|protein sucrose synthase (EC 2.4.1.13) 1 - rice
Length = 808
Score = 776 bits (1981), Expect = 0.0
Identities = 360/440 (81%), Positives = 403/440 (90%)
Frame = +2
Query: 2 GIVRKWISRFEVWPYLETFTEDVAHEISGELQANPDLIIGNYSDGNLVACLLAHKMGVTH 181
GI+RKWISRF+VWP+LET+TEDVA+EI E+QA PDLIIGNYSDGNLVA LLAHK+GVT
Sbjct: 369 GILRKWISRFDVWPFLETYTEDVANEIMREMQAKPDLIIGNYSDGNLVATLLAHKLGVTQ 428
Query: 182 CTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQEIAGNKDTV 361
CTIAHALEKTKYPNSD+Y KF+ YHFSCQFT DLIAMNH DFIITSTFQEIAG+KDTV
Sbjct: 429 CTIAHALEKTKYPNSDIYLDKFDSQYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTV 488
Query: 362 GQYESHMAFTMPGMYRVVHGIDVFDPKFNIVSPGADMSIYFPYSESQRRLTSLHPEIEEL 541
GQYESH+AFT+PG+YRVVHGIDVFDPKFNIVSPGADMS+YFPY+E+ +RLT+ HPEIEEL
Sbjct: 489 GQYESHIAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSVYFPYTEADKRLTAFHPEIEEL 548
Query: 542 LYSNVDNNEHKYVLKDRNKPIIFSMARLDRVKNLTGLVELYGKNPRLQELVNLVVVCGDH 721
LYS V+N+EHK+VLKD+NKPIIFSMARLDRVKN+TGLVE+YGKN L++L NLV+VCGDH
Sbjct: 549 LYSEVENDEHKFVLKDKNKPIIFSMARLDRVKNMTGLVEMYGKNAHLRDLANLVIVCGDH 608
Query: 722 GNPSKDKEEQAEFKKMFDLIEQYNLNGHVRWISAQMNRVRNAELYRYICDTKGAFVQPAF 901
GN SKD+EEQAEFKKM+ LI+QY L GH+RWISAQMNRVRN ELYRYICDTKG FVQPAF
Sbjct: 609 GNQSKDREEQAEFKKMYGLIDQYKLKGHIRWISAQMNRVRNGELYRYICDTKGVFVQPAF 668
Query: 902 YEAFGLTVIEAMTCGLPTFATAYGGPAEIIVNGVSGYHIDPYQGDKASALLVEFFEKCEV 1081
YEAFGLTVIEAMTCGLPT AT +GGPAEIIV+GVSG HIDPY DKA+ +LV FFEKC+
Sbjct: 669 YEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFEKCKQ 728
Query: 1082 DPSHWTKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYAL 1261
D ++W ISQGGLQRI EKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRY+EM YAL
Sbjct: 729 DSTYWDNISQGGLQRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYAL 788
Query: 1262 KYRTMASTVPLAVEGESSSK 1321
KYR++AS VPLAV+GES+SK
Sbjct: 789 KYRSLASAVPLAVDGESTSK 808
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103421791
Number of Sequences: 59712
Number of extensions: 2810839
Number of successful extensions: 11089
Number of sequences better than 1.0e-10: 36
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 11041
Number of HSP's gapped (non-prelim): 30
length of query: 543
length of database: 26,991,925
effective HSP length: 52
effective length of query: 491
effective length of database: 23,886,901
effective search space: 11728468391
effective search space used: 11728468391
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG610 Members:8 3pri:Y 1e-97
P40880 Carbonic anhydrase, chloroplast precursor (Carbonate
dehydratase) pir||T04478 probable carbonate dehydratase (
(906 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9629.m04324|protein Carbonic anhydrase, putative 339 6e-93
9629.m04323|protein Carbonic anhydrase, putative 335 5e-92
9637.m02550|protein carbonate dehydratase, putative 167 2e-41
9637.m02548|protein carbonate dehydratase, putative 167 2e-41
9637.m02549|protein carbonate dehydratase, putative 167 2e-41
9637.m02551|protein carbonate dehydratase, putative 104 3e-22
9629.m04325|protein retrotransposon protein, putative, un... 87 4e-17
9629.m04324|protein Carbonic anhydrase, putative
Length = 262
Score = 339 bits (859), Expect = 6e-93
Identities = 162/204 (79%), Positives = 177/204 (86%), Gaps = 4/204 (1%)
Frame = +2
Query: 20 NHPCRLKME----RLRTGFDKFKTEVYDKKPDLFGPLKANQEPTYLLFACADSRVCPSVT 187
NHP KM+ RL+ GF KFKTE YDKKP+LF PLKA Q P Y++F+CADSRVCPSVT
Sbjct: 54 NHPPPSKMDAAVDRLKDGFAKFKTEFYDKKPELFEPLKAGQAPKYMVFSCADSRVCPSVT 113
Query: 188 LGLEPGEAFTVRNIGAMVPCYCKNKHTGVGSAIEYAVCALKVKVIVVIGHSRCGGIKALL 367
+GLEPGEAFTVRNI MVP YCK KH GVGSAIEYAVCALKV++IVVIGHSRCGGIKALL
Sbjct: 114 MGLEPGEAFTVRNIANMVPAYCKIKHAGVGSAIEYAVCALKVELIVVIGHSRCGGIKALL 173
Query: 368 SLKDGADDSFHFVEDWVRIGFSAKKKVKDECCDLPFEDQCAVLEKEAVNVSLQNLSTYPF 547
SLKDGA DSFHFVEDWVR GF AKKKV+ E LPF+DQCA+LEKEAVN SL+NL TYPF
Sbjct: 174 SLKDGAPDSFHFVEDWVRTGFPAKKKVQTEHASLPFDDQCAILEKEAVNQSLENLKTYPF 233
Query: 548 VKEGVANGTLKLIGGHYDFVSGKFDTWE 631
VKEG+ANGTLKL+GGHYDFVSG D WE
Sbjct: 234 VKEGIANGTLKLVGGHYDFVSGNLDLWE 261
9629.m04323|protein Carbonic anhydrase, putative
Length = 272
Score = 335 bits (851), Expect = 5e-92
Identities = 157/197 (79%), Positives = 173/197 (87%)
Frame = +2
Query: 41 MERLRTGFDKFKTEVYDKKPDLFGPLKANQEPTYLLFACADSRVCPSVTLGLEPGEAFTV 220
++RL+ GF KFKTE YDKKP+LF PLKA Q P Y++F+CADSRVCPSVT+GLEPGEAFTV
Sbjct: 75 VDRLKDGFAKFKTEFYDKKPELFEPLKAGQAPKYMVFSCADSRVCPSVTMGLEPGEAFTV 134
Query: 221 RNIGAMVPCYCKNKHTGVGSAIEYAVCALKVKVIVVIGHSRCGGIKALLSLKDGADDSFH 400
RNI MVP YCK KH GVGSAIEYAVCALKV++IVVIGHSRCGGIKALLSLKDGA DSFH
Sbjct: 135 RNIANMVPAYCKIKHAGVGSAIEYAVCALKVELIVVIGHSRCGGIKALLSLKDGAPDSFH 194
Query: 401 FVEDWVRIGFSAKKKVKDECCDLPFEDQCAVLEKEAVNVSLQNLSTYPFVKEGVANGTLK 580
FVEDWVR GF AKKKV+ E LPF+DQCA+LEKEAVN SL+NL TYPFVKEG+ANGTLK
Sbjct: 195 FVEDWVRTGFPAKKKVQTEHASLPFDDQCAILEKEAVNQSLENLKTYPFVKEGIANGTLK 254
Query: 581 LIGGHYDFVSGKFDTWE 631
L+GGHYDFVSG D WE
Sbjct: 255 LVGGHYDFVSGNLDLWE 271
9637.m02550|protein carbonate dehydratase, putative
Length = 333
Score = 167 bits (419), Expect = 2e-41
Identities = 85/173 (49%), Positives = 119/173 (68%), Gaps = 2/173 (1%)
Frame = +2
Query: 116 LKANQEPTYLLFACADSRVCPSVTLGLEPGEAFTVRNIGAMVPCYCKNKHTGVGSAIEYA 295
L Q P +++ ACADSRVCPS LG +PGEAFTVRNI +VP Y ++ + +A+E+A
Sbjct: 139 LAQQQTPKFMVVACADSRVCPSSVLGFQPGEAFTVRNIANLVPPY-QHGASETSAALEFA 197
Query: 296 VCALKVKVIVVIGHSRCGGIKALLSLKDGADDSFH--FVEDWVRIGFSAKKKVKDECCDL 469
V L+V+ ++V+GHSRCGGI+AL+S+K DDS F+ DWV I SA+ + +L
Sbjct: 198 VNTLEVENVLVVGHSRCGGIQALMSMKSKQDDSQSRSFIRDWVSIAKSARLSTEAAAGNL 257
Query: 470 PFEDQCAVLEKEAVNVSLQNLSTYPFVKEGVANGTLKLIGGHYDFVSGKFDTWEL 634
FE QC EKE++N SL NL TYP++++ V GTL L GG+Y+F+ F+ W+L
Sbjct: 258 NFELQCKHCEKESINSSLLNLLTYPWIEKRVNEGTLSLHGGYYNFIDCTFEKWKL 312
9637.m02548|protein carbonate dehydratase, putative
Length = 250
Score = 167 bits (419), Expect = 2e-41
Identities = 85/173 (49%), Positives = 119/173 (68%), Gaps = 2/173 (1%)
Frame = +2
Query: 116 LKANQEPTYLLFACADSRVCPSVTLGLEPGEAFTVRNIGAMVPCYCKNKHTGVGSAIEYA 295
L Q P +++ ACADSRVCPS LG +PGEAFTVRNI +VP Y ++ + +A+E+A
Sbjct: 56 LAQQQTPKFMVVACADSRVCPSSVLGFQPGEAFTVRNIANLVPPY-QHGASETSAALEFA 114
Query: 296 VCALKVKVIVVIGHSRCGGIKALLSLKDGADDSFH--FVEDWVRIGFSAKKKVKDECCDL 469
V L+V+ ++V+GHSRCGGI+AL+S+K DDS F+ DWV I SA+ + +L
Sbjct: 115 VNTLEVENVLVVGHSRCGGIQALMSMKSKQDDSQSRSFIRDWVSIAKSARLSTEAAAGNL 174
Query: 470 PFEDQCAVLEKEAVNVSLQNLSTYPFVKEGVANGTLKLIGGHYDFVSGKFDTWEL 634
FE QC EKE++N SL NL TYP++++ V GTL L GG+Y+F+ F+ W+L
Sbjct: 175 NFELQCKHCEKESINSSLLNLLTYPWIEKRVNEGTLSLHGGYYNFIDCTFEKWKL 229
9637.m02549|protein carbonate dehydratase, putative
Length = 306
Score = 167 bits (419), Expect = 2e-41
Identities = 85/173 (49%), Positives = 119/173 (68%), Gaps = 2/173 (1%)
Frame = +2
Query: 116 LKANQEPTYLLFACADSRVCPSVTLGLEPGEAFTVRNIGAMVPCYCKNKHTGVGSAIEYA 295
L Q P +++ ACADSRVCPS LG +PGEAFTVRNI +VP Y ++ + +A+E+A
Sbjct: 112 LAQQQTPKFMVVACADSRVCPSSVLGFQPGEAFTVRNIANLVPPY-QHGASETSAALEFA 170
Query: 296 VCALKVKVIVVIGHSRCGGIKALLSLKDGADDSFH--FVEDWVRIGFSAKKKVKDECCDL 469
V L+V+ ++V+GHSRCGGI+AL+S+K DDS F+ DWV I SA+ + +L
Sbjct: 171 VNTLEVENVLVVGHSRCGGIQALMSMKSKQDDSQSRSFIRDWVSIAKSARLSTEAAAGNL 230
Query: 470 PFEDQCAVLEKEAVNVSLQNLSTYPFVKEGVANGTLKLIGGHYDFVSGKFDTWEL 634
FE QC EKE++N SL NL TYP++++ V GTL L GG+Y+F+ F+ W+L
Sbjct: 231 NFELQCKHCEKESINSSLLNLLTYPWIEKRVNEGTLSLHGGYYNFIDCTFEKWKL 285
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58799892
Number of Sequences: 59712
Number of extensions: 1705439
Number of successful extensions: 7700
Number of sequences better than 1.0e-10: 14
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7684
Number of HSP's gapped (non-prelim): 9
length of query: 302
length of database: 26,991,925
effective HSP length: 51
effective length of query: 250
effective length of database: 23,946,613
effective search space: 5986653250
effective search space used: 5986653250
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG614 Members:412 3pri:Y 1e-116
P27665 Oxygen-evolving enhancer protein 1, chloroplast
precursor (OEE1) (33 kDa subunit of oxygen evolving system of
(1319 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9629.m02949|protein Manganese-stabilizing protein / photo... 599 e-171
9629.m02950|protein Manganese-stabilizing protein / photo... 484 e-136
9639.m04036|protein transposon protein, putative, CACTA, ... 71 4e-12
9631.m03557|protein putative protein kinase 69 1e-11
9633.m03752|protein retrotransposon protein, putative, un... 69 2e-11
9629.m02949|protein Manganese-stabilizing protein / photosystem II
polypeptide
Length = 333
Score = 599 bits (1527), Expect = e-171
Identities = 303/326 (92%), Positives = 314/326 (95%), Gaps = 7/326 (2%)
Frame = +2
Query: 62 MAASLQAAATLM-PAKIGGRASSV----RPSSHVARAFGVD--AAARITCSLQSDIREVA 220
MAASLQAAATLM PAK+GGRASS RPSSHVARAFGVD AA RITCSLQSDIREVA
Sbjct: 1 MAASLQAAATLMQPAKLGGRASSAALPSRPSSHVARAFGVDTGAAGRITCSLQSDIREVA 60
Query: 221 SKCADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDG 400
+KCADAAK+AGFALATSALLVSGASAEG P+RLTFDEIQSKTYMEVKGTGTANQCPT++G
Sbjct: 61 NKCADAAKLAGFALATSALLVSGASAEGVPRRLTFDEIQSKTYMEVKGTGTANQCPTVEG 120
Query: 401 GVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLE 580
GVDSF FKAGKY MKKFCLEPTSFTVKAEG+ KN PP FQKTKLMTRLTYTLDE+EGPLE
Sbjct: 121 GVDSFAFKAGKYNMKKFCLEPTSFTVKAEGVAKNAPPEFQKTKLMTRLTYTLDEIEGPLE 180
Query: 581 VGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGS 760
V +DGT+KFEEKDGIDYAAVTVQLPGGERVPFLFT+K LVATGKPESF GPFLVPSYRGS
Sbjct: 181 VSSDGTIKFEEKDGIDYAAVTVQLPGGERVPFLFTIKNLVATGKPESFGGPFLVPSYRGS 240
Query: 761 SFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEV 940
SFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEV
Sbjct: 241 SFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEV 300
Query: 941 IGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 1039
IGVFESVQPSDTDLGAK PKDVKIQGVWYAQLE
Sbjct: 301 IGVFESVQPSDTDLGAKVPKDVKIQGVWYAQLE 333
9629.m02950|protein Manganese-stabilizing protein / photosystem II
polypeptide
Length = 274
Score = 484 bits (1233), Expect = e-136
Identities = 239/276 (86%), Positives = 250/276 (89%)
Frame = +2
Query: 212 EVASKCADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPT 391
+ A+ AK+ G A SGASAEG P+RLTFDEIQSKTYMEVKGTGTANQCPT
Sbjct: 6 QAAATLMQPAKLGGRAS-------SGASAEGVPRRLTFDEIQSKTYMEVKGTGTANQCPT 58
Query: 392 IDGGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPAFQKTKLMTRLTYTLDEMEG 571
++GGVDSF FKAGKY MKKFCLEPTSFTVKAEG+ KN PP FQKTKLMTRLTYTLDE+EG
Sbjct: 59 VEGGVDSFAFKAGKYNMKKFCLEPTSFTVKAEGVAKNAPPEFQKTKLMTRLTYTLDEIEG 118
Query: 572 PLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSY 751
PLEV +DGT+KFEEKDGIDYAAVTVQLPGGERVPFLFT+K LVATGKPESF GPFLVPSY
Sbjct: 119 PLEVSSDGTIKFEEKDGIDYAAVTVQLPGGERVPFLFTIKNLVATGKPESFGGPFLVPSY 178
Query: 752 RGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPET 931
RGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPET
Sbjct: 179 RGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPET 238
Query: 932 GEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 1039
GEVIGVFESVQPSDTDLGAK PKDVKIQGVWYAQLE
Sbjct: 239 GEVIGVFESVQPSDTDLGAKVPKDVKIQGVWYAQLE 274
9639.m04036|protein transposon protein, putative, CACTA, En/Spm
sub-class
Length = 946
Score = 71.0 bits (171), Expect = 4e-12
Identities = 80/298 (26%), Positives = 111/298 (36%), Gaps = 11/298 (3%)
Frame = +3
Query: 36 PAYQAHRPTWQRLSKPRPR*-CRPRSAAG-PPPCGRRRTSPGRSASTLPPGSRAPCNPTS 209
PA + H P+ + P + P S A PPP +P ST PP ++P P
Sbjct: 631 PAPEGHTPSPPESTPPSEKSPLTPESKASCPPPPTPEGHTPSPPKST-PPTEKSPHTP-- 687
Query: 210 GRSQASAPTPPRWPASPSQPLPSSSLAQVRRGRPRG*PSTKSRARPTWR*RVPAPRTSAR 389
S++S+P PP P P S V + P S P P+P S+
Sbjct: 688 -ESESSSPPPPA--PEGHMPSPPKSTPPVEKSPPTPESEASSPPPPAPEGHTPSPPKSSP 744
Query: 390 PSTAASTPSPSRPASTR*RSSAWSPPPSPSRPRASRRTSHRPSRRPSS--*PVSLTPLTR 563
P + P+ S PP S P H P + P S P S P +
Sbjct: 745 PEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEK 804
Query: 564 ---WKARSRSAPT---APSSSRRRTASTTRPSQCSSPEASACRSS-SPSSSSSPPASRRA 722
A S PT +PS + P + SSP A SS P SSSPP
Sbjct: 805 SPPTPAEESSPPTPEKSPSPPSGHEGTPPSPVKSSSPPPEAHVSSPPPEKSSSPPPEAHV 864
Query: 723 SAGPSSCPATGVPLSSTQRAVVALLATTTRWRCPPEAEETRRSWPRRT*RTRPPPRATSP 902
S+ P + P + + + ++ + PP S P + + PPP T
Sbjct: 865 SSPPPPEKSPPPPETKSPPTLTPEISPPPEGKSPPSHTPESSSPPSK--ESEPPPTPTPK 922
Query: 903 SA*PRASRR 929
S+ P R
Sbjct: 923 SSPPSHEER 931
Score = 69.9 bits (168), Expect = 1e-11
Identities = 88/303 (29%), Positives = 124/303 (40%), Gaps = 32/303 (10%)
Frame = +3
Query: 81 PRPR*CRPRSAAGPPPCGRRRTSPGRSASTLPPGS---RAPCNPTSGRSQASAPTPPRWP 251
P P P PP + +P AS+ PP + P P S +P P
Sbjct: 598 PTPEEYTPSPPKSTPPAEKSPPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPLTPESK 657
Query: 252 AS-PSQPLPSSSLAQVRRGRPRG*PSTKSRARPTWR*RVPAPRT--SARPSTAASTPSPS 422
AS P P P + P P+ KS P P P PS STP
Sbjct: 658 ASCPPPPTPEGHTPSPPKSTP---PTEKSPHTPESESSSPPPPAPEGHMPSPPKSTPPVE 714
Query: 423 RPASTR*RSSAWSPPP------SPSRPRASRRTSHRPSRRPSS*PVSLTPLTRWKARSRS 584
+ T S A SPPP +PS P++S P P+S TP + +S
Sbjct: 715 KSPPTP-ESEASSPPPPAPEGHTPSPPKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPPKS 773
Query: 585 APTAPSSSRRRTASTTRPSQC--SSPEASACRSSSPSSSSSPPASRRASAGPSSCPAT-G 755
+P S + + PS+ +SP S +P+ SSPP ++ + PS T
Sbjct: 774 SPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPSGHEGTPP 833
Query: 756 VPLSSTQRAVVALLATTTRWRC---PPEAEET-------------RRSWPRRT*RTRPPP 887
P+ S+ A +++ + PPEA + +S P T PPP
Sbjct: 834 SPVKSSSPPPEAHVSSPPPEKSSSPPPEAHVSSPPPPEKSPPPPETKSPPTLTPEISPPP 893
Query: 888 RATS-PSA*PRASRRPAR**ASSRACSRQTPTSAP 989
S PS P +S P++ S TP S+P
Sbjct: 894 EGKSPPSHTPESSSPPSK---ESEPPPTPTPKSSP 925
Score = 67.5 bits (162), Expect = 5e-11
Identities = 86/308 (27%), Positives = 113/308 (35%), Gaps = 29/308 (9%)
Frame = +3
Query: 102 PRSAAGPPPCGRRRTS---PGRSASTLPPGSRAPCNPTSGRS-----QASAPTPPRW--P 251
P PPP T P S+ PP ++P PT+ S + P+PP+ P
Sbjct: 523 PERKKAPPPQAEPPTEYSPPATPESSPPPEGKSPPTPTASHSPPPVPEGHTPSPPKSGPP 582
Query: 252 ASPSQPLPSSSLAQVRRGRPRG*PSTKSRARPTWR*RVPAPRTSARPSTAASTPSPSRPA 431
A S P P S K+ PT P+P S P S P+P A
Sbjct: 583 AGESPPTPES----------------KASPPPTPEEYTPSPPKST-PPAEKSPPTPESKA 625
Query: 432 STR*RSSAWSPPPSPSRPRASRRTSHRPSRRPSS*PVSLTPLTRWKARSRSAPTAPSSSR 611
S+ PPP+P H PS S+ P +PLT S P P
Sbjct: 626 SS-------PPPPAPE--------GHTPSPPESTPPSEKSPLTPESKASCPPPPTPEGHT 670
Query: 612 RRTASTTRP---------SQCSSPE--------ASACRSSSPSSSSSPPASRRASAGPSS 740
+T P S+ SSP S +S+ P S P AS+ P
Sbjct: 671 PSPPKSTPPTEKSPHTPESESSSPPPPAPEGHMPSPPKSTPPVEKSPPTPESEASSPPPP 730
Query: 741 CPA--TGVPLSSTQRAVVALLATTTRWRCPPEAEETRRSWPRRT*RTRPPPRATSPSA*P 914
P T P S+ + T PP EE S P+ + P SP P
Sbjct: 731 APEGHTPSPPKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPPEEKSPPPHSPEKSP 790
Query: 915 RASRRPAR**ASSRACSRQTPTSAPRRPRMSRSRVCG 1025
+ P S ++ S+P P S S G
Sbjct: 791 PSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPSG 827
9631.m03557|protein putative protein kinase
Length = 675
Score = 69.5 bits (167), Expect = 1e-11
Identities = 69/261 (26%), Positives = 105/261 (39%), Gaps = 1/261 (0%)
Frame = +3
Query: 126 PCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPPRWPASPSQPLPSSSLAQVRRG 305
P G P +S+S P S P PT Q P PP PA+P P P+S G
Sbjct: 17 PAGGPPEPPPQSSSASPSPSPPPPPPTPSSPQRPPPPPP--PATPPPPPPASP------G 68
Query: 306 RPRG*PSTKSRARPTWR*RVPAPRTSARPSTAASTPSPSRPASTR*RSSAWSPPPSPSRP 485
+ + P++ S+ P V +P S+ P + PSP P+ + PPPSP
Sbjct: 69 KNQS-PASPSQDSPP---PVASPSVSSPPPAPTTPPSPPPPSKS-------PPPPSPPPT 117
Query: 486 RASRRTSHR-PSRRPSS*PVSLTPLTRWKARSRSAPTAPSSSRRRTASTTRPSQCSSPEA 662
+S SH+ P +S P S + + P+ P +++ ++S+T P+ +
Sbjct: 118 TSSTPPSHQSPPEEGTSPPPS-------PSSGATTPSPPPNAQSSSSSSTPPAGAGTSPP 170
Query: 663 SACRSSSPSSSSSPPASRRASAGPSSCPATGVPLSSTQRAVVALLATTTRWRCPPEAEET 842
+ SP + SPP + + P P P + + L T + PP+A
Sbjct: 171 APREMPSPGTPPSPPTTLITTQAPPIQPPP--PPGGNSMIMPSSLTTAGTSQSPPDA--- 225
Query: 843 RRSWPRRT*RTRPPPRATSPSA 908
T PPP A S A
Sbjct: 226 -------TTAGAPPPPAPSVGA 240
9633.m03752|protein retrotransposon protein, putative, unclassified
Length = 796
Score = 68.7 bits (165), Expect = 2e-11
Identities = 95/319 (29%), Positives = 129/319 (39%), Gaps = 8/319 (2%)
Frame = +3
Query: 90 R*CRPRSAAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPPRWPASPSQP 269
R R S P +S R+A S PT+ ++S P+ + S+P
Sbjct: 73 RPARSNSVTRPSIQSTLMSSSNRTAVLNTSISSVSSRPTTPSRRSSTVVAPKQSIAASRP 132
Query: 270 LPSSSLAQVRRGRPRG*PSTKSRARPTWR*RVPAPRTSARPSTAASTPSP--SRPASTR* 443
+P+ S V+ PST ++ RP+ R S S AA T S SRP++
Sbjct: 133 VPARSSTPVKTR-----PSTPTKTRPSTPVRTRQTANSTSDSAAARTTSAQNSRPSTPTS 187
Query: 444 RSSAWSPPPSPSRPRASRRTSHRPSRRPSS*PVSLTPLTRWKARSRSAPTAPSSSRRRTA 623
RS A S + P S RP + +S T +R A + SA + P SS
Sbjct: 188 RSRAMPNSSSGAIPAMS---------RPGASTISAT--SRSNASTISATSRPGSSSSNVP 236
Query: 624 STTRPSQCSSPEA-SACRSSSPSSSSSPPASRRASAGPSSCPATG-VPLSSTQRAVVALL 797
+R + SS S RSSS SS+ + R A SS PA G P ++ +L
Sbjct: 237 GISRATSLSSSTVPSMSRSSSRSSTPT-----RQPAMRSSAPAVGRSPSVGRSSSISSLT 291
Query: 798 ATTTRWRCPPEAEETRRSWPRRT*RTRPPPRATSPSA*PRASRRPAR**ASSRACSRQTP 977
++ R P A R S P + P R +SP PRA RP
Sbjct: 292 SSINR----PAANGGRNSAP----SSAPSSRPSSPGPRPRAPVRPLDIPDFPNETPPNLR 343
Query: 978 TSAPRRP-RMSRSR---VCGTRSSSLT 1046
T P RP RSR G RS+S T
Sbjct: 344 TKLPERPLSAGRSRPGMALGVRSTSNT 370
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94977523
Number of Sequences: 59712
Number of extensions: 3273328
Number of successful extensions: 43936
Number of sequences better than 1.0e-10: 10
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 43763
Number of HSP's gapped (non-prelim): 32
length of query: 439
length of database: 26,991,925
effective HSP length: 52
effective length of query: 387
effective length of database: 23,886,901
effective search space: 9244230687
effective search space used: 9244230687
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG619 Members:42 3pri:Y 3e-88
BAA78733.1 ESTs AU058067(E20733), AAU058070(E20873) correspond
to a region of the predicted gene.~Similar to Populus trem
(1346 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9634.m00630|protein O-methyltransferase 476 e-134
9636.m03925|protein O-methyltransferase 289 9e-78
9636.m03927|protein O-methyltransferase 286 5e-77
9636.m03926|protein O-methyltransferase 286 8e-77
9636.m03928|protein O-methyltransferase 279 8e-75
9636.m00509|protein O-methyltransferase, putative 153 6e-37
9639.m04036|protein transposon protein, putative, CACTA, ... 82 3e-15
9640.m03456|protein Similar to extensin-like protein - maize 78 3e-14
9629.m05120|protein retrotransposon protein, putative, Ty... 77 8e-14
9629.m00408|protein expressed protein 74 8e-14
9633.m03752|protein retrotransposon protein, putative, un... 74 5e-13
9637.m03072|protein retrotransposon protein, putative, Ty... 68 4e-11
9636.m00525|protein dna-directed rna polymerase ii larges... 67 7e-11
9632.m03436|protein transposon protein, putative, CACTA, ... 67 9e-11
9634.m00630|protein O-methyltransferase
Length = 260
Score = 476 bits (1211), Expect = e-134
Identities = 235/262 (89%), Positives = 245/262 (92%)
Frame = +2
Query: 353 AADATAAVPKDQAANGSAAASTGGEQVTRHSEVGHKSLLQSDALYQYILETSVYPREHEC 532
AA A AA +QA NGS+ GGEQ TRHSEVGHKSLL+SD LYQYILETSVYPREHEC
Sbjct: 4 AASAAAAATTEQA-NGSS----GGEQKTRHSEVGHKSLLKSDDLYQYILETSVYPREHEC 58
Query: 533 MKELREITANHPWNLMTTSADEGQFLNMLLKLIGAKKTMEIGVYTGYSLLATALAIPDDG 712
MKELRE+TANHPWNLMTTSADEGQFLN+LLKLIGAKKTMEIGVYTGYSLLATALAIPDDG
Sbjct: 59 MKELREVTANHPWNLMTTSADEGQFLNLLLKLIGAKKTMEIGVYTGYSLLATALAIPDDG 118
Query: 713 TILAMDINRENYELGLPCIEKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDAD 892
TILAMDINRENYELGLP IEKAGVAHKIDFREGPALPVLD L+E+E NHG+FDFVFVDAD
Sbjct: 119 TILAMDINRENYELGLPSIEKAGVAHKIDFREGPALPVLDQLVEEEGNHGSFDFVFVDAD 178
Query: 893 KDNYLNYHERLMKLVKVGGLLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAA 1072
KDNYLNYHERLMKLVKVGGL+GYDNTLWNGSVVLPADAPMRKYIRYYRDFVL+LNKALAA
Sbjct: 179 KDNYLNYHERLMKLVKVGGLVGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLELNKALAA 238
Query: 1073 DQRVEICQLPVGDGITLCRRAK 1138
D RVEICQLPVGDGITLCRR K
Sbjct: 239 DHRVEICQLPVGDGITLCRRVK 260
9636.m03925|protein O-methyltransferase
Length = 252
Score = 289 bits (731), Expect = 9e-78
Identities = 138/231 (59%), Positives = 181/231 (77%), Gaps = 5/231 (2%)
Frame = +2
Query: 440 HSEVG--HKSLLQSDALYQYILETSVYPREHECMKELREITANHPWNLMTTSADEGQFLN 613
HS++ +K+LL+SDALY+Y+L+T+V PRE ECM++LR IT H W M +SADE Q L
Sbjct: 15 HSDIDSTNKTLLKSDALYKYVLDTTVLPREPECMRDLRLITDKHQWGFMQSSADEAQLLG 74
Query: 614 MLLKLIGAKKTMEIGVYTGYSLLATALAIPDDGTILAMDINRENYELGLPCIEKAGVAHK 793
MLLK+ GAK+T+E+GV+TGYSLLATALA+P+DG ++A+D +RE+YE+G P +EKAGVAHK
Sbjct: 75 MLLKMAGAKRTIEVGVFTGYSLLATALALPEDGKVVAIDPDRESYEIGRPFLEKAGVAHK 134
Query: 794 IDFREGPALPVLDALLEDEANHG---TFDFVFVDADKDNYLNYHERLMKLVKVGGLLGYD 964
+DFREG L LD LL +EA G FDF FVDADK NY+ YHE+L++LV+VGG + YD
Sbjct: 135 VDFREGKGLEKLDELLAEEAAAGREAAFDFAFVDADKPNYVKYHEQLLQLVRVGGHIVYD 194
Query: 965 NTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPVGDGITLCRR 1132
NTLW G+V LP D P+ R + + DLN LAAD R+++CQL + DGIT+CRR
Sbjct: 195 NTLWAGTVALPPDTPLSDLDRRFSVAIRDLNSRLAADPRIDVCQLAIADGITICRR 250
9636.m03927|protein O-methyltransferase
Length = 292
Score = 286 bits (725), Expect = 5e-77
Identities = 142/267 (53%), Positives = 190/267 (70%), Gaps = 1/267 (0%)
Frame = +2
Query: 332 TPAM-ATTAADATAAVPKDQAANGSAAASTGGEQVTRHSEVGHKSLLQSDALYQYILETS 508
TPA ++ A A A ANG + + HS K+LL+S++L++Y+L T
Sbjct: 23 TPASRVSSTAMAAANGDASHGANGGIQIQSKEMKTAIHSNDSPKTLLKSESLHEYMLNTM 82
Query: 509 VYPREHECMKELREITANHPWNLMTTSADEGQFLNMLLKLIGAKKTMEIGVYTGYSLLAT 688
VYPRE+E M+ELR IT+ H + M++ +EGQ L++LL L GAK T+E+GV+TG S+LAT
Sbjct: 83 VYPRENEFMRELRLITSEHTYGFMSSPPEEGQLLSLLLNLTGAKNTIEVGVFTGCSVLAT 142
Query: 689 ALAIPDDGTILAMDINRENYELGLPCIEKAGVAHKIDFREGPALPVLDALLEDEANHGTF 868
ALAIPDDG ++A+D++RE ++LGLP I+KAGVAHK+DFREG A+P+LD LL +E N G F
Sbjct: 143 ALAIPDDGKVVAIDVSREYFDLGLPVIKKAGVAHKVDFREGAAMPILDNLLANEENEGKF 202
Query: 869 DFVFVDADKDNYLNYHERLMKLVKVGGLLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVL 1048
DF FVDADK NY YHERL++LV+ GG+L YDNTLW GSV L D+ + ++ + R ++
Sbjct: 203 DFAFVDADKGNYGEYHERLLRLVRAGGVLAYDNTLWGGSVALEDDSVLEEFDQDIRRSIV 262
Query: 1049 DLNKALAADQRVEICQLPVGDGITLCRR 1132
N +A D RVE QLPV DGITLCRR
Sbjct: 263 AFNAKIAGDPRVEAVQLPVSDGITLCRR 290
9636.m03926|protein O-methyltransferase
Length = 260
Score = 286 bits (723), Expect = 8e-77
Identities = 141/248 (56%), Positives = 188/248 (74%), Gaps = 8/248 (3%)
Frame = +2
Query: 389 AANGSAA-ASTGGEQVTR-------HSEVGHKSLLQSDALYQYILETSVYPREHECMKEL 544
AANG A+ + GG Q+ HS K+LL+S++L++Y+L T VYPRE+E M+EL
Sbjct: 3 AANGDASHGANGGIQIQSKEMKTAIHSNDSPKTLLKSESLHEYMLNTMVYPRENEFMREL 62
Query: 545 REITANHPWNLMTTSADEGQFLNMLLKLIGAKKTMEIGVYTGYSLLATALAIPDDGTILA 724
R IT+ H + M++ +EGQ L++LL L GAK T+E+GV+TG S+LATALAIPDDG ++A
Sbjct: 63 RLITSEHTYGFMSSPPEEGQLLSLLLNLTGAKNTIEVGVFTGCSVLATALAIPDDGKVVA 122
Query: 725 MDINRENYELGLPCIEKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNY 904
+D++RE ++LGLP I+KAGVAHK+DFREG A+P+LD LL +E N G FDF FVDADK NY
Sbjct: 123 IDVSREYFDLGLPVIKKAGVAHKVDFREGAAMPILDNLLANEENEGKFDFAFVDADKGNY 182
Query: 905 LNYHERLMKLVKVGGLLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRV 1084
YHERL++LV+ GG+L YDNTLW GSV L D+ + ++ + R ++ N +A D RV
Sbjct: 183 GEYHERLLRLVRAGGVLAYDNTLWGGSVALEDDSVLEEFDQDIRRSIVAFNAKIAGDPRV 242
Query: 1085 EICQLPVGDGITLCRR 1132
E QLPV DGITLCRR
Sbjct: 243 EAVQLPVSDGITLCRR 258
9636.m03928|protein O-methyltransferase
Length = 234
Score = 279 bits (706), Expect = 8e-75
Identities = 132/229 (57%), Positives = 173/229 (74%), Gaps = 1/229 (0%)
Frame = +2
Query: 452 GHKSLLQSDALYQYILETSVYPREHECMKELREITANHPWNLMTTSADEGQFLNMLLKLI 631
G +LL+SD++ +Y+L+T+VYPREHE ++ELR IT NHP + M +S D+ QF ++LLK+I
Sbjct: 7 GSNTLLKSDSILEYVLDTTVYPREHERLRELRLITQNHPKSFMGSSPDQMQFFSVLLKMI 66
Query: 632 GAKKTMEIGVYTGYSLLATALAIPDDGTILAMDINRENYELGLPCIEKAGVAHKIDFREG 811
GA+ +E+GV+TGYSLLATALA+PDDG ++A+D++RE YELG P IE AGVAHK+DFR G
Sbjct: 67 GARNAVEVGVFTGYSLLATALALPDDGKVVAIDVSREYYELGRPVIEDAGVAHKVDFRHG 126
Query: 812 PALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLMKLVKVGGLLGYDNTLWNGSVV 991
L VLD LL G FDF + DADK+ Y YHERL++L++VGG++ YDNTLW GSV
Sbjct: 127 DGLAVLDQLL--AGGEGKFDFAYADADKEQYRGYHERLVRLLRVGGVVAYDNTLWGGSVA 184
Query: 992 LPADAP-MRKYIRYYRDFVLDLNKALAADQRVEICQLPVGDGITLCRRAK 1138
+P D P Y R RD+++ N +AAD RVE C LPV DG+TLCRR K
Sbjct: 185 MPRDTPGSSAYDRVVRDYMVGFNAMVAADDRVEACLLPVADGVTLCRRLK 234
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103827697
Number of Sequences: 59712
Number of extensions: 3945068
Number of successful extensions: 96068
Number of sequences better than 1.0e-10: 28
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 95639
Number of HSP's gapped (non-prelim): 98
length of query: 448
length of database: 26,991,925
effective HSP length: 52
effective length of query: 396
effective length of database: 23,886,901
effective search space: 9459212796
effective search space used: 9459212796
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG620 Members:95 3pri:Y 6e-67
Q00327 Photosystem I reaction center subunit V, chloroplast
precursor (PSI-G) (Photosystem I 9 kDa protein)
(947 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9637.m02710|protein photosystem i reaction center subunit... 222 7e-58
9637.m01516|protein chlorophyll a/b-binding protein I pre... 104 2e-22
9629.m05067|protein Chlorophyll A-B binding protein, puta... 104 2e-22
9629.m03990|protein Chlorophyll A-B binding protein, puta... 104 2e-22
9631.m03807|protein chlorophyll a/b binding protein 99 1e-20
9635.m03724|protein chlorophyll a-b binding protein of lh... 92 1e-18
9637.m02710|protein photosystem i reaction center subunit v,
chloroplast precursor (psi-g)(photosystem i 9 kda
protein)
Length = 141
Score = 222 bits (560), Expect = 7e-58
Identities = 112/137 (81%), Positives = 123/137 (89%), Gaps = 3/137 (2%)
Frame = +1
Query: 340 AAVLSPPAVAGLRLAPSPRA---AASFRGVSPPARRSVAARAALEPSVVISLSTGLSLVM 510
A LSPP VAGLRLAPSPR + +FR +P RRSVAARA L PS+VISLSTG+SL +
Sbjct: 3 ATSLSPPTVAGLRLAPSPRVRSPSVAFRA-APARRRSVAARAELSPSLVISLSTGVSLFL 61
Query: 511 GRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEFAGILKSNDPVGFNLVDVLAWGSIG 690
GRFVFFNFQRENVAKQVPEQNGKTHF+AGDERAKEFAG+L+SNDPVGFNLVDVLAWGS+G
Sbjct: 62 GRFVFFNFQRENVAKQVPEQNGKTHFDAGDERAKEFAGLLRSNDPVGFNLVDVLAWGSLG 121
Query: 691 HIVAYYILATTSNGYDPPFF 750
HIVAYYILAT SNGY+P FF
Sbjct: 122 HIVAYYILATCSNGYNPNFF 141
9637.m01516|protein chlorophyll a/b-binding protein I precursor -
rice
Length = 265
Score = 104 bits (258), Expect = 2e-22
Identities = 48/51 (94%), Positives = 50/51 (97%)
Frame = -3
Query: 240 KNGRPAMFSMFGFFVQAIVSGKGPLENLADHLADPVNNNAWAFATNFVPGK 88
KNGR AMFSMFGFFVQAIV+GKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
9629.m05067|protein Chlorophyll A-B binding protein, putative
Length = 265
Score = 104 bits (258), Expect = 2e-22
Identities = 48/51 (94%), Positives = 50/51 (97%)
Frame = -3
Query: 240 KNGRPAMFSMFGFFVQAIVSGKGPLENLADHLADPVNNNAWAFATNFVPGK 88
KNGR AMFSMFGFFVQAIV+GKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
9629.m03990|protein Chlorophyll A-B binding protein, putative
Length = 261
Score = 104 bits (258), Expect = 2e-22
Identities = 48/51 (94%), Positives = 50/51 (97%)
Frame = -3
Query: 240 KNGRPAMFSMFGFFVQAIVSGKGPLENLADHLADPVNNNAWAFATNFVPGK 88
KNGR AMFSMFGFFVQAIV+GKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 211 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 261
9631.m03807|protein chlorophyll a/b binding protein
Length = 263
Score = 98.7 bits (242), Expect = 1e-20
Identities = 54/86 (62%), Positives = 61/86 (70%), Gaps = 3/86 (3%)
Frame = -3
Query: 345 GGGGGGHGPHSSFGAGAVWVGGCSG---TNAPRVLDLGKNGRPAMFSMFGFFVQAIVSGK 175
GGG G G + GA G + T A + KNGR AMFSMFGFFVQAIV+GK
Sbjct: 175 GGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 234
Query: 174 GPLENLADHLADPVNNNAWAFATNFVPGK 88
GP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 235 GPIENLFDHVADPVANNAWAYATNFVPGK 263
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72437294
Number of Sequences: 59712
Number of extensions: 2669534
Number of successful extensions: 71861
Number of sequences better than 1.0e-10: 12
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71854
Number of HSP's gapped (non-prelim): 6
length of query: 315
length of database: 26,991,925
effective HSP length: 51
effective length of query: 264
effective length of database: 23,946,613
effective search space: 6321905832
effective search space used: 6321905832
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG624 Members:72 3pri:Y 1e-118
AAL26573.1 putative fructokinase II [Oryza sativa]
dbj|BAC78556.1| fructokinase [Oryza sativa (japonica cultivar-group)]
(1378 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9636.m00111|protein pfkB family carbohydrate kinase 628 e-180
9634.m01241|protein probable fructokinase F28G11.11 [impo... 423 e-118
9629.m06644|protein pfkB family carbohydrate kinase 415 e-115
9629.m06250|protein SOUL heme-binding protein, putative 155 2e-37
9631.m03901|protein Similar to F4N2.16 129 2e-29
9629.m05120|protein retrotransposon protein, putative, Ty... 94 7e-19
9639.m04036|protein transposon protein, putative, CACTA, ... 92 3e-18
9636.m00525|protein dna-directed rna polymerase ii larges... 90 1e-17
9630.m00367|protein transposon protein, putative, CACTA, ... 85 2e-16
9633.m03752|protein retrotransposon protein, putative, un... 82 2e-15
9631.m04359|protein transposon protein, putative, CACTA, ... 80 9e-15
9631.m06019|protein expressed protein 76 2e-13
9629.m00408|protein expressed protein 75 2e-13
9631.m03557|protein putative protein kinase 75 2e-13
9634.m04142|protein retrotransposon protein, putative, Ty... 75 4e-13
9632.m03281|protein transposon protein, putative, CACTA, ... 71 3e-12
9632.m03280|protein transposon protein, putative, CACTA, ... 71 3e-12
9632.m03436|protein transposon protein, putative, CACTA, ... 71 3e-12
9638.m02460|protein retrotransposon protein, putative, un... 71 4e-12
9633.m00004|protein transposon protein, putative, CACTA, ... 70 8e-12
9636.m00111|protein pfkB family carbohydrate kinase
Length = 336
Score = 628 bits (1603), Expect = e-180
Identities = 309/336 (91%), Positives = 322/336 (94%)
Frame = +3
Query: 96 MAPLGDAVAPAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAVS 275
MAPLGD A AAAA P LVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACA+S
Sbjct: 1 MAPLGDGAAAAAAAEPNLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAIS 60
Query: 276 KLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGEREFMF 455
KLGGSSAFVGKFGDDEFGHMLV+ILK+NGVNAEGCLFD+HARTALAFVTLK+NGEREFMF
Sbjct: 61 KLGGSSAFVGKFGDDEFGHMLVDILKKNGVNAEGCLFDEHARTALAFVTLKSNGEREFMF 120
Query: 456 YRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDP 635
YRNPSADMLLTEAELNLDLIRRA+IFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDP
Sbjct: 121 YRNPSADMLLTEAELNLDLIRRAKIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDP 180
Query: 636 NVRLPLWPSAQAARDGIMSIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLWFEGLKLLI 815
NVRLPLWPS AAR GI+SIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLWF+GLKLLI
Sbjct: 181 NVRLPLWPSEDAARAGILSIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLWFDGLKLLI 240
Query: 816 VTDGEKGCRYFTKDFKGSVPGYSVNTVDTTGAGDAFVGSLLVNVSKDDSIFYNEAKLREV 995
VTDGEKGCRYFTKDFKGSVPG+SVNTVDTTGAGDAFVGSLLVNV+KDDSIF+NE KLRE
Sbjct: 241 VTDGEKGCRYFTKDFKGSVPGFSVNTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREA 300
Query: 996 LQFSNACGAICTTKKGAIPALPTTATALELISKGSN 1103
L+FSNACGAICTTKKGAIPALPT A A ELISK +N
Sbjct: 301 LKFSNACGAICTTKKGAIPALPTVAVAQELISKAAN 336
9634.m01241|protein probable fructokinase F28G11.11 [imported] -
Arabidopsis thaliana
Length = 397
Score = 423 bits (1075), Expect = e-118
Identities = 205/324 (63%), Positives = 260/324 (79%), Gaps = 1/324 (0%)
Frame = +3
Query: 123 PAAAAAPGLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAVSKLGGSSAFV 302
P +++P VV FGE+LIDFVP V GVSLAE+ F KAPGGAPANVA +++LGGSSAF+
Sbjct: 71 PGTSSSPH-VVCFGELLIDFVPTVNGVSLAEASAFKKAPGGAPANVAVGIARLGGSSAFI 129
Query: 303 GKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGEREFMFYRNPSADML 482
GK GDDEFG+ML +ILK+N VN +G LFD HARTALAFVTL+ +GEREFMFYRNPSADML
Sbjct: 130 GKVGDDEFGYMLADILKENNVNNQGLLFDAHARTALAFVTLRNDGEREFMFYRNPSADML 189
Query: 483 LTEAELNLDLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPNVRLPLWPS 662
L E EL+LDLIR+A+IFH+GSISLITEPC++AH+AA +AAK AG+L SYDPN+RLPLW S
Sbjct: 190 LEEKELDLDLIRKAKIFHHGSISLITEPCKTAHIAAAKAAKDAGVLISYDPNLRLPLWSS 249
Query: 663 AQAARDGIMSIWKEADFIKVSDDEVAFLTQG-DANDEKNVLSLWFEGLKLLIVTDGEKGC 839
A ARDGI+SIW+ AD IK+S++EV+FLT+G D D+ + L LKLL+VT+G +GC
Sbjct: 250 ADDARDGILSIWETADVIKISEEEVSFLTKGEDPYDDSVIKKLMHPNLKLLLVTEGPEGC 309
Query: 840 RYFTKDFKGSVPGYSVNTVDTTGAGDAFVGSLLVNVSKDDSIFYNEAKLREVLQFSNACG 1019
RY++K+F G V G VN VDTTGAGDAFV +L +S D S+ +E +L+E L+F+N CG
Sbjct: 310 RYYSKEFNGRVGGLKVNAVDTTGAGDAFVAGILSQLSVDFSLLQDEGRLKEALKFANVCG 369
Query: 1020 AICTTKKGAIPALPTTATALELISK 1094
A+ T++GAIPALPT ++ ++K
Sbjct: 370 ALTVTERGAIPALPTRQQVVDALTK 394
9629.m06644|protein pfkB family carbohydrate kinase
Length = 323
Score = 415 bits (1055), Expect = e-115
Identities = 204/314 (64%), Positives = 249/314 (78%)
Frame = +3
Query: 147 LVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAVSKLGGSSAFVGKFGDDEF 326
LVVSFGEMLIDFVP VAGVSLAE+ FVKAPGGAPANVA AV++LGG +AFVGK GDDEF
Sbjct: 7 LVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLGDDEF 66
Query: 327 GHMLVEILKQNGVNAEGCLFDQHARTALAFVTLKANGEREFMFYRNPSADMLLTEAELNL 506
G ML IL+ NGV+ G +FD ARTALAFVTL+A+GEREFMFYRNPSADMLLT AELN+
Sbjct: 67 GRMLAAILRDNGVDDGGVVFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTHAELNV 126
Query: 507 DLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPNVRLPLWPSAQAARDGI 686
+LI+RA +FHYGSISLI EPCRSAH+ AM AK AG L SYDPN+R LWPS + AR I
Sbjct: 127 ELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEARTKI 186
Query: 687 MSIWKEADFIKVSDDEVAFLTQGDANDEKNVLSLWFEGLKLLIVTDGEKGCRYFTKDFKG 866
+SIW +AD +KVS+ E+ FLT D+ ++ V+ LW +KLL+VT G++GC+Y+ +DF+G
Sbjct: 187 LSIWDQADIVKVSEVELEFLTGIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYARDFRG 246
Query: 867 SVPGYSVNTVDTTGAGDAFVGSLLVNVSKDDSIFYNEAKLREVLQFSNACGAICTTKKGA 1046
+VP Y V VDTTGAGDAFVG+LL + +D S ++ KL E ++F+NACGAI TKKGA
Sbjct: 247 AVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKGA 306
Query: 1047 IPALPTTATALELI 1088
IP+LPT L+L+
Sbjct: 307 IPSLPTEVEVLKLM 320
9629.m06250|protein SOUL heme-binding protein, putative
Length = 818
Score = 155 bits (388), Expect = 2e-37
Identities = 113/315 (35%), Positives = 168/315 (52%), Gaps = 53/315 (16%)
Frame = +3
Query: 141 PGLVVSFGEMLIDFVP-----------DVAGVSLA---ESGGFVKAPGGAPANVACAVSK 278
P LV FG +FVP D+ L E F +APG A +NVA A+++
Sbjct: 441 PPLVCCFGAPRWEFVPTVRVSDRQMHPDIYSTWLHLQWEPPEFARAPGSAASNVAIALTR 500
Query: 279 LGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHARTALAFVTLK-------ANG 437
LGG +A +GK GDD+FG LV + V FD A TA A + + + G
Sbjct: 501 LGGRAAVLGKVGDDDFGRELVYRMNCERVQTRAIRFDDGAATATARMKVGFRDREDGSGG 560
Query: 438 EREFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRSAHVAAMRAAKSAGI 617
R +A+ L++AE+N+D+++ AR+FH+ S L+T S A+ +K G
Sbjct: 561 TRLVAETVKSAAEDSLSKAEINVDVLKEARVFHFNSEVLLTPSMESTLFRAIELSKKFGS 620
Query: 618 LCSYDPNVRLPLWPSAQAARDGIMSIWKEADFIKVSDDEVAFLTQGDANDEK-------- 773
+D N+ LPLW S ++ I W EAD I+VS DE+ FL + K
Sbjct: 621 KIFFDLNLPLPLWRSRDETKELINKAWNEADIIEVSRDELEFLLDHEYYQYKRANPPQYY 680
Query: 774 -------------------NVLSLWFEGLKLLIVTDGEKGCRYFTKDFKGSVPG-----Y 881
+ +W +G+KLL+VT G Y+T F G V G
Sbjct: 681 LDGFHLTRNWPQYYHYTPEEIAPIWHDGIKLLLVTYGTLRIHYYTPKFHGCVIGTEDALI 740
Query: 882 SVNTVDTTGAGDAFVGSLLVNVSKDDSIFYNEAKLREVLQFSNACGAICTTKKGAIPALP 1061
+ T D TG+GDA V + + ++ ++ ++ L L+F+ A G I GA+ P
Sbjct: 741 TPYTTDRTGSGDAVVAAAIRKLTSCPEMYEDQDTLERNLRFAVAAGIISQWTIGAVRGFP 800
Query: 1062 TTATALEL 1085
T + A L
Sbjct: 801 TESAAQNL 808
9631.m03901|protein Similar to F4N2.16
Length = 572
Score = 129 bits (320), Expect = 2e-29
Identities = 81/267 (30%), Positives = 143/267 (53%), Gaps = 21/267 (7%)
Frame = +3
Query: 225 FVKAPGGAPANVACAVSKLGGSSAFVGKFGDDEFGHMLVEILKQNGVNAEGCLFDQHART 404
FV+APGG+ +NVA A++ GG F+GK GDD++G + L NGV D A T
Sbjct: 245 FVRAPGGSSSNVALALAASGGRVEFMGKLGDDDYGQSTLYHLNVNGVQTRAIKMDPSAFT 304
Query: 405 ALAFVTLKANGEREFMFYRNPSADMLLTEAELNLDLIRRARIFHYGSISLITEPCRSAHV 584
A++ + + + + ++N +++ A++F+Y S +L+ RS+
Sbjct: 305 AMSLMKVTED---------------CFVQTDINPAVLKEAKMFYYNSSALLEPTTRSSLS 349
Query: 585 AAMRAAKSAGILCSYDPNVRLPLWPSAQAARDGIMSIWKEADFIKVSDDEVAFLTQ---- 752
A+ +K G + +D N+ LPLW S++ + + W+ AD I+++ E+ FL
Sbjct: 350 KAIEVSKKFGGVTFFDLNLPLPLWSSSKETKSLVKEAWEAADIIEITKQELEFLCGIKPS 409
Query: 753 ---GDANDEKN---------VLSLWFEGLKLLIVTDGEKGCRYFTKDFKGSVPG-----Y 881
G +++K+ V LW E LK+L VT+G Y+TK+ G V G
Sbjct: 410 EKFGTKDNDKSKFTHYSPEVVTKLWHENLKVLFVTNGTSKIHYYTKEHDGWVRGTEDAPI 469
Query: 882 SVNTVDTTGAGDAFVGSLLVNVSKDDSIFYNEAKLREVLQFSNACGAI 1025
+ T D + +GDA V +L+ ++ + + ++ L ++ + CG I
Sbjct: 470 TPFTGDMSQSGDAIVAALMKMLAINPHLVTDKDYLHTAMKHAITCGVI 517
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97382947
Number of Sequences: 59712
Number of extensions: 3520389
Number of successful extensions: 99741
Number of sequences better than 1.0e-10: 45
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 97657
Number of HSP's gapped (non-prelim): 311
length of query: 459
length of database: 26,991,925
effective HSP length: 52
effective length of query: 406
effective length of database: 23,886,901
effective search space: 9698081806
effective search space used: 9698081806
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG634 Members:83 3pri:Y 1e-120
T06204 hypothetical protein pBH6-12 - barley emb|CAA74593.1|
hypothetical protein [Hordeum vulgare]
(855 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9638.m03081|protein putative basic secretory protein 314 1e-85
9638.m03079|protein putative secretory protein 289 6e-78
9638.m03080|protein putative secretory protein 227 8e-63
9638.m03081|protein putative basic secretory protein
Length = 229
Score = 314 bits (796), Expect = 1e-85
Identities = 150/226 (66%), Positives = 182/226 (80%), Gaps = 3/226 (1%)
Frame = +2
Query: 14 MKISIAAAAVLLLALAAT---ASAVTFDVTNEASSTAGGQRFDREYGAAYAKQVLSDASS 184
MK+ + AA +L +A +++ A+AVT++V+NEA+STAGGQRFDREYGA YAKQVL+ ASS
Sbjct: 1 MKLHVVAAILLAVAASSSPPPAAAVTYEVSNEAASTAGGQRFDREYGAGYAKQVLAAASS 60
Query: 185 FTWGIFNQPDPSDRRPADGDTVTLAVRDTNGIASTSGSTIELSARSVGGITGDNLKEQVD 364
FTW IF+QP +DRRP D V LAVRD +GIASTSG+TI L A V G+TG++ K QV
Sbjct: 61 FTWSIFSQPSAADRRPVDA--VVLAVRDVDGIASTSGNTITLGAGYVAGVTGNDFKTQVT 118
Query: 365 GVLYHEVVHVWQWGLQDYHEHHGIFEGIADYVRLKAGYVAANWVKEGGGSRWDEGYDVTA 544
GVLYHEVVHVWQWGLQDY H ++EGIAD+VRL+AGY AA WV+ G G+ W++ Y VTA
Sbjct: 119 GVLYHEVVHVWQWGLQDYGAHSWVYEGIADFVRLRAGYPAAGWVQPGQGNSWEDSYSVTA 178
Query: 545 RFLDYCDSRKPGFVAEMNGKLKDGYNDDYFVQILGTSADQLWNDYKAKY 691
RF DYCDS KPGFVA++N KLK+GYN DYFVQI G + QLW DYKAKY
Sbjct: 179 RFFDYCDSVKPGFVADLNAKLKNGYNVDYFVQITGKTVQQLWQDYKAKY 227
9638.m03079|protein putative secretory protein
Length = 233
Score = 289 bits (731), Expect = 6e-78
Identities = 142/223 (63%), Positives = 164/223 (72%), Gaps = 3/223 (1%)
Frame = +2
Query: 23 SIAAAAVLLLALAATASAVTFDVTNEASSTAGGQRFDREYGAAYAKQVLSDASSFTWGIF 202
++AA A A A AVTFD TN ASSTAGGQRFDRE G YAKQVL+DASSF W F
Sbjct: 8 TLAALMAAAAAAATAAGAVTFDATNTASSTAGGQRFDREVGVDYAKQVLADASSFIWDAF 67
Query: 203 NQP-DPSDRRPADGDTVTLAVRDTNGIASTSGSTIELSARSVGGITGDN--LKEQVDGVL 373
QP D DR+P D VTL V D +G+A TSG I LSAR VGG + + ++ +V GVL
Sbjct: 68 EQPGDGGDRKPVDA--VTLTVEDIDGVAFTSGDGIHLSARYVGGYSSSSGDVRTEVTGVL 125
Query: 374 YHEVVHVWQWGLQDYHEHHGIFEGIADYVRLKAGYVAANWVKEGGGSRWDEGYDVTARFL 553
YHE HVWQWGLQDY H ++EGIAD+VRL+AGYVAA WV+ G G+ W++ Y VTARF
Sbjct: 126 YHEATHVWQWGLQDYAAHSWVYEGIADFVRLRAGYVAAGWVQPGQGNSWEDSYSVTARFF 185
Query: 554 DYCDSRKPGFVAEMNGKLKDGYNDDYFVQILGTSADQLWNDYKAKY 691
DYCDS KPGFVA++N KLKDGYN DYFVQI G + QLW DYKAKY
Sbjct: 186 DYCDSVKPGFVADINAKLKDGYNVDYFVQITGKTVQQLWQDYKAKY 231
9638.m03080|protein putative secretory protein
Length = 260
Score = 227 bits (572), Expect(2) = 8e-63
Identities = 114/187 (60%), Positives = 138/187 (72%), Gaps = 4/187 (2%)
Frame = +2
Query: 131 DREYGAAYAKQVLSDASSFTWGIFNQP-DPSDRRPADGDTVTLAVRDTNGIASTSGSTIE 307
DRE G YAKQ+L+DASSF W F QP D DR+P D VTL V D +G+A TSG I
Sbjct: 71 DREVGVDYAKQMLADASSFIWDTFEQPGDGGDRKPVDA--VTLTVEDIDGVAFTSGDGIH 128
Query: 308 LSARSVGGITG-DNLKEQVDGVLYHEVVHVWQWGLQDYHEHHGIFEGIADYVRLKAGYVA 484
LSAR VGG + +++ +V GVLYHE HVWQW + + G+ EGIAD+VRL+AGY
Sbjct: 129 LSARYVGGYSAAGDVRAEVTGVLYHEATHVWQWDGRGGADG-GLIEGIADFVRLRAGYAP 187
Query: 485 ANWVKEGGGSRWDEGYDVTARFLDYCDSRK--PGFVAEMNGKLKDGYNDDYFVQILGTSA 658
+WV+ G G RWD+GYDVTARFLDYCDS GFVA++NGK+KDGY+DD+FVQI G +
Sbjct: 188 PHWVQPGQGDRWDQGYDVTARFLDYCDSPAVVQGFVAQLNGKMKDGYSDDFFVQISGKTI 247
Query: 659 DQLWNDYKAKY 691
DQLW DYKAKY
Sbjct: 248 DQLWQDYKAKY 258
Score = 33.6 bits (75), Expect(2) = 8e-63
Identities = 18/28 (64%), Positives = 21/28 (74%), Gaps = 6/28 (21%)
Frame = +1
Query: 58 GSHG*RGH------VRRDERGVEHSRRPAIRQGV 141
G+HG RG VRRDE GVEH RR A+ + V
Sbjct: 41 GAHGRRGRDGRRRDVRRDEHGVEHRRRAAVDREV 74
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62420153
Number of Sequences: 59712
Number of extensions: 2130528
Number of successful extensions: 56018
Number of sequences better than 1.0e-10: 6
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56005
Number of HSP's gapped (non-prelim): 4
length of query: 285
length of database: 26,991,925
effective HSP length: 50
effective length of query: 234
effective length of database: 24,006,325
effective search space: 5617480050
effective search space used: 5617480050
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG635 Members:118 3pri:Y 3e-45
P13194 Photosystem I reaction center subunit IV, chloroplast
precursor (PSI-E) (Photosystem I 10.8 kDa polypeptide)
(867 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9635.m02437|protein photosystem i reaction center subunit... 213 2e-55
9635.m02437|protein photosystem i reaction center subunit iv
(psi-e).
Length = 149
Score = 213 bits (538), Expect = 2e-55
Identities = 117/145 (80%), Positives = 127/145 (86%), Gaps = 5/145 (3%)
Frame = +3
Query: 114 MAST-NMASATSRFMLAAGIPSGANGGVSSRVSFLPSNRLGLKLVA-RAEEPTAAAPAEP 287
MAST N+ASATSRF+LA G G+ GG +SRVSF +NR+G ++V RAEE AA P P
Sbjct: 1 MASTINVASATSRFLLAGG-NGGSGGGGASRVSFA-ANRVGRRMVVVRAEEEAAAPPPPP 58
Query: 288 APAADEKP---EAAVATKEPAKAKPPPRGPKRGTKVKILRRESYWYNGTGSVVTVDQDPN 458
PAA+EKP EAAVATKEPA AKPPP GPKRGTKVKILRRESYWYNGTGSVVTVDQDPN
Sbjct: 59 PPAAEEKPAEAEAAVATKEPAAAKPPPIGPKRGTKVKILRRESYWYNGTGSVVTVDQDPN 118
Query: 459 TRYPVVVRFAKVNYAGVSTNNYALDEIKEV 548
TRYPVVVRFAKVNYAGVSTNNYALDEI+EV
Sbjct: 119 TRYPVVVRFAKVNYAGVSTNNYALDEIQEV 148
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62038857
Number of Sequences: 59712
Number of extensions: 2227625
Number of successful extensions: 30525
Number of sequences better than 1.0e-10: 2
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30521
Number of HSP's gapped (non-prelim): 1
length of query: 289
length of database: 26,991,925
effective HSP length: 50
effective length of query: 238
effective length of database: 24,006,325
effective search space: 5713505350
effective search space used: 5713505350
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG636 Members:267 3pri:Y 1e-150
P27523 Chlorophyll A-B binding protein of LHCII type III,
chloroplast precursor (CAB)
(1135 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9635.m03724|protein chlorophyll a-b binding protein of lh... 485 e-137
9631.m03807|protein chlorophyll a/b binding protein 370 e-102
9637.m01516|protein chlorophyll a/b-binding protein I pre... 351 1e-96
9629.m05067|protein Chlorophyll A-B binding protein, puta... 351 1e-96
9629.m03990|protein Chlorophyll A-B binding protein, puta... 350 3e-96
9637.m00977|protein Chlorophyll A-B binding protein, puta... 211 2e-54
9639.m01284|protein chlorophyll a/b-binding protein CP26 ... 202 1e-51
9635.m03882|protein LHCI-680, photosystem I antenna prote... 132 1e-30
9634.m02114|protein chlorophyll a/b-binding protein precu... 131 2e-30
9630.m00958|protein chlorophyll a/b-binding protein type ... 126 6e-29
9637.m02343|protein AY086461 PSI type II chlorophyll a/b-... 120 6e-27
9635.m03689|protein probable chlorophyll a/b-binding prot... 119 8e-27
9630.m05194|protein light-harvesting complex protein [imp... 118 2e-26
9639.m01283|protein chlorophyll a/b-binding protein CP26 ... 113 6e-25
9636.m03389|protein chlorophyll a/b-binding protein presu... 105 1e-22
9632.m03624|protein chlorophyll a/b-binding apoprotein CP... 104 2e-22
9630.m00957|protein chlorophyll a/b-binding protein type ... 82 1e-15
9635.m03724|protein chlorophyll a-b binding protein of lhcii type
iii, chloroplastprecursor (cab)
Length = 266
Score = 485 bits (1236), Expect = e-137
Identities = 234/268 (87%), Positives = 248/268 (92%)
Frame = +2
Query: 65 MASTIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLG 244
MASTIMA SR + AKTPFL G R ++A P+RDIAAA GRITM +LWYGPDRVKYLG
Sbjct: 1 MASTIMAPTSRVLAAKTPFL-GHPRPSNA-PVRDIAAAATGRITMSKELWYGPDRVKYLG 58
Query: 245 PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQ 424
PFSAQTPSYL GEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGC+ PEVL+
Sbjct: 59 PFSAQTPSYLRGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLE 118
Query: 425 KWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRING 604
KWV V+FKEPVWFKAG+QIFS+GGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEG+RING
Sbjct: 119 KWVRVDFKEPVWFKAGAQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYRING 178
Query: 605 LDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 784
L GVG+GNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 179 LPGVGDGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 238
Query: 785 PLENLFDHLDDPVANNAWVFATKFAPGS 868
PLENL DHL DPVANNAWV+ATKF PGS
Sbjct: 239 PLENLLDHLADPVANNAWVYATKFTPGS 266
9631.m03807|protein chlorophyll a/b binding protein
Length = 263
Score = 370 bits (940), Expect = e-102
Identities = 191/259 (73%), Positives = 208/259 (79%), Gaps = 8/259 (3%)
Frame = +2
Query: 89 ASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGN-------DLWYGPDRVKYLGP 247
A+ A+ T FL G A L + GRITM +WYGPDR KYLGP
Sbjct: 2 AASALHQTTSFL---GTAPRRDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGP 58
Query: 248 FSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQK 427
FS QTPSYL GEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGCVFPE+L K
Sbjct: 59 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSK 118
Query: 428 WVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGL 607
GV+F E VWFKAG+QIFSEGGLDYLGNPNLVHAQSILA+ QV+LMG VEG+R+ G
Sbjct: 119 -NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGG- 176
Query: 608 DGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 784
+GEG D +YPGG FDPLGLADDP TFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 177 GPLGEGLDKVYPGGA-FDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235
Query: 785 PLENLFDHLDDPVANNAWVFATKFAPG 865
P+ENLFDH+ DPVANNAW +AT F PG
Sbjct: 236 PIENLFDHVADPVANNAWAYATNFVPG 262
9637.m01516|protein chlorophyll a/b-binding protein I precursor -
rice
Length = 265
Score = 351 bits (891), Expect = 1e-96
Identities = 183/267 (68%), Positives = 202/267 (75%), Gaps = 1/267 (0%)
Frame = +2
Query: 65 MASTIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLG 244
MA+ MA +S + P S + +R AA + G+ WYG DRV YLG
Sbjct: 1 MAAATMALSSPVMARAAPSTSSALFGEARITMRKTAAKPKPAASSGSP-WYGADRVLYLG 59
Query: 245 PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQ 424
P S + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFPE+L
Sbjct: 60 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 119
Query: 425 KWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRING 604
+ GV+F E VWFKAGSQIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG VEG+RI G
Sbjct: 120 R-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 178
Query: 605 LDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 781
+GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 179 -GPLGEVVDPLYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 236
Query: 782 GPLENLFDHLDDPVANNAWVFATKFAPG 865
GPLENL DHL DPV NNAW +AT F PG
Sbjct: 237 GPLENLADHLADPVNNNAWAYATNFVPG 264
9629.m05067|protein Chlorophyll A-B binding protein, putative
Length = 265
Score = 351 bits (891), Expect = 1e-96
Identities = 183/267 (68%), Positives = 204/267 (75%), Gaps = 1/267 (0%)
Frame = +2
Query: 65 MASTIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLG 244
MA++ MA +S A +A + + +R AA G+ WYG DRV YLG
Sbjct: 1 MAASTMALSSPAALAGKAVANAKVFGEGRVTMRKSAAKPKPAAASGSP-WYGADRVLYLG 59
Query: 245 PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQ 424
P S + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFPE+L
Sbjct: 60 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 119
Query: 425 KWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRING 604
+ GV+F E VWFKAGSQIFSEGGLDYLGNP+L+HAQSILA+ G QV+LMG VEG+R+ G
Sbjct: 120 R-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWGCQVVLMGAVEGYRVAG 178
Query: 605 LDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 781
+GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 179 -GPLGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 236
Query: 782 GPLENLFDHLDDPVANNAWVFATKFAPG 865
GPLENL DHL DPV NNAW +AT F PG
Sbjct: 237 GPLENLADHLADPVNNNAWAYATNFVPG 264
9629.m03990|protein Chlorophyll A-B binding protein, putative
Length = 261
Score = 350 bits (888), Expect = 3e-96
Identities = 184/267 (68%), Positives = 202/267 (74%), Gaps = 2/267 (0%)
Frame = +2
Query: 65 MASTIMAAASRAVVAKTPF-LSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYL 241
MA+ MA +S A+ K + G+GR A +G WYG DRV YL
Sbjct: 1 MAAATMALSSPALAGKAAAKVFGEGRITMRKSAAKPKPAASG------SPWYGADRVLYL 54
Query: 242 GPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVL 421
GP S + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFPE+L
Sbjct: 55 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 114
Query: 422 QKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRIN 601
+ GV+F E VWFKAGSQIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG VEG+RI
Sbjct: 115 AR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIA 173
Query: 602 GLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 778
G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 174 G-GPLGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 231
Query: 779 KGPLENLFDHLDDPVANNAWVFATKFAPG 865
KGPLENL DHL DPV NNAW +AT F PG
Sbjct: 232 KGPLENLADHLADPVNNNAWAYATNFVPG 260
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80675479
Number of Sequences: 59712
Number of extensions: 2723699
Number of successful extensions: 40888
Number of sequences better than 1.0e-10: 34
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 40813
Number of HSP's gapped (non-prelim): 27
length of query: 378
length of database: 26,991,925
effective HSP length: 51
effective length of query: 326
effective length of database: 23,946,613
effective search space: 7806595838
effective search space used: 7806595838
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG652 Members:34 3pri:Y 5e-60
NP_182239.1 ADP-ribosylation factor 1 (ARF1) [Arabidopsis
thaliana] sp|P36397|ARF1_ARATH ADP-ribosylation factor 1
(1151 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9633.m03842|protein ADP-ribosylation factor [imported] - ... 231 2e-60
9635.m01196|protein ADP-ribosylation factor family 230 3e-60
9631.m05882|protein ADP-ribosylation factor 230 3e-60
9631.m05881|protein ADP-ribosylation factor 230 3e-60
9635.m01193|protein ADP-ribosylation factor family, putative 230 3e-60
9629.m01594|protein ADP-ribosylation factor family 229 7e-60
9629.m05876|protein ADP-ribosylation factor family 225 1e-58
9636.m01507|protein ADP-ribosylation factor 3 - Arabidops... 146 9e-35
9630.m04581|protein ADP-ribosylation factor family 145 2e-34
9638.m03942|protein putative ADP-ribosylation factor 143 4e-34
9630.m00263|protein ADP-ribosylation factor family 137 3e-32
9639.m03408|protein Similar to AY086337 ADP-ribosylation ... 133 6e-31
9634.m00141|protein ADP-ribosylation factor family 123 4e-28
9630.m02130|protein probable adp-ribosylation factor at2g... 117 4e-26
9638.m03941|protein putative ADP-ribosylation factor 91 3e-18
9631.m02711|protein putative GTP-binding protein 86 1e-16
9635.m04291|protein ADP-ribosylation factor family, putative 86 1e-16
9631.m00948|protein AY114718 ADP-ribosylation factor-like... 73 1e-12
9630.m04896|protein ADP-ribosylation factor-like protein 71 4e-12
9638.m03940|protein putative ADP-ribosylation factor 67 7e-11
9633.m03842|protein ADP-ribosylation factor [imported] - rice
Length = 181
Score = 231 bits (582), Expect = 2e-60
Identities = 108/115 (93%), Positives = 113/115 (97%)
Frame = -2
Query: 565 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIAEARDELHRMLNEDELRNAVLLVFAN 386
DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ EARDELHRMLNEDELR+AVLLVFAN
Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFAN 126
Query: 385 KQDLPNAMNAAEITDKLGLHSLRQRHWYIQSACATSGEGLYEGLDWLSNNIASKS 221
KQDLPNAMNAAEITDKLGLHSLRQRHWYIQS CATSGEGLYEGLDWLSNNIA+K+
Sbjct: 127 KQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181
9635.m01196|protein ADP-ribosylation factor family
Length = 181
Score = 230 bits (581), Expect = 3e-60
Identities = 108/115 (93%), Positives = 113/115 (97%)
Frame = -2
Query: 565 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIAEARDELHRMLNEDELRNAVLLVFAN 386
DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDR+ EARDELHRMLNEDELR+AVLLVFAN
Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFAN 126
Query: 385 KQDLPNAMNAAEITDKLGLHSLRQRHWYIQSACATSGEGLYEGLDWLSNNIASKS 221
KQDLPNAMNAAEITDKLGLHSLRQRHWYIQS CAT+GEGLYEGLDWLS+NIASK+
Sbjct: 127 KQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIASKA 181
9631.m05882|protein ADP-ribosylation factor
Length = 181
Score = 230 bits (581), Expect = 3e-60
Identities = 108/115 (93%), Positives = 113/115 (97%)
Frame = -2
Query: 565 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIAEARDELHRMLNEDELRNAVLLVFAN 386
DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDR+ EARDELHRMLNEDELR+AVLLVFAN
Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFAN 126
Query: 385 KQDLPNAMNAAEITDKLGLHSLRQRHWYIQSACATSGEGLYEGLDWLSNNIASKS 221
KQDLPNAMNAAEITDKLGLHSLRQRHWYIQS CAT+GEGLYEGLDWLS+NIASK+
Sbjct: 127 KQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIASKA 181
9631.m05881|protein ADP-ribosylation factor
Length = 181
Score = 230 bits (581), Expect = 3e-60
Identities = 108/115 (93%), Positives = 113/115 (97%)
Frame = -2
Query: 565 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIAEARDELHRMLNEDELRNAVLLVFAN 386
DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDR+ EARDELHRMLNEDELR+AVLLVFAN
Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFAN 126
Query: 385 KQDLPNAMNAAEITDKLGLHSLRQRHWYIQSACATSGEGLYEGLDWLSNNIASKS 221
KQDLPNAMNAAEITDKLGLHSLRQRHWYIQS CAT+GEGLYEGLDWLS+NIASK+
Sbjct: 127 KQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIASKA 181
9635.m01193|protein ADP-ribosylation factor family, putative
Length = 304
Score = 230 bits (581), Expect = 3e-60
Identities = 108/115 (93%), Positives = 113/115 (97%)
Frame = -2
Query: 565 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIAEARDELHRMLNEDELRNAVLLVFAN 386
DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDR+ EARDELHRMLNEDELR+AVLLVFAN
Sbjct: 190 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFAN 249
Query: 385 KQDLPNAMNAAEITDKLGLHSLRQRHWYIQSACATSGEGLYEGLDWLSNNIASKS 221
KQDLPNAMNAAEITDKLGLHSLRQRHWYIQS CAT+GEGLYEGLDWLS+NIASK+
Sbjct: 250 KQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIASKA 304
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71062400
Number of Sequences: 59712
Number of extensions: 2075617
Number of successful extensions: 42512
Number of sequences better than 1.0e-10: 40
Number of HSP's better than 0.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42489
Number of HSP's gapped (non-prelim): 20
length of query: 383
length of database: 26,991,925
effective HSP length: 51
effective length of query: 332
effective length of database: 23,946,613
effective search space: 7950275516
effective search space used: 7950275516
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG653 Members:8 3pri:Y 4e-05
AAO39550.1 RE04347p [Drosophila melanogaster]
(921 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m01037|protein hypothetical protein 256 6e-68
9634.m05009|protein transposon protein, putative, CACTA, ... 70 6e-12
9629.m00785|protein transposon protein, putative, CACTA, ... 67 4e-11
9631.m01037|protein hypothetical protein
Length = 391
Score = 256 bits (646), Expect = 6e-68
Identities = 159/227 (70%), Positives = 181/227 (79%), Gaps = 39/227 (17%)
Frame = -3
Query: 898 EEDDGYKKKPSAGGYGD--GGGYEDE--YKKRPT---GGHGGGRYEEDDEYKKKPT---- 752
EE++ YKKKP++GG G GG YE+E YKK+PT GG+GGG YEE+D+YKKKP+
Sbjct: 137 EEEEDYKKKPTSGGGGGYGGGRYEEEDNYKKKPTSGGGGYGGGMYEEEDDYKKKPSSGGG 196
Query: 751 GGHGGGRYEEDDEY-KRPSGGGH-GGRYEEE--DYKKKPS-------GGGRYEEDDYKKK 605
GG+GGGRYEE+DEY K+PSGGG+ GGRYEEE DY KKPS GGGRY ED+YKKK
Sbjct: 197 GGYGGGRYEEEDEYRKKPSGGGYGGGRYEEEEDDYMKKPSAGAGGYGGGGRY-EDEYKKK 255
Query: 604 PS---GGGRYEEDD-YKKKPSGGSHGGKDESEGGGFG------DYLKL----AQGFMKKQ 467
P GGGRYEEDD Y KKPSGG G S GGG G DY K + G +
Sbjct: 256 PGGGHGGGRYEEDDEYNKKPSGGY--GYGASSGGGHGGRYEEDDYKKKPSAHSGGGGGRY 313
Query: 466 DGEGGHKKTSGHGGG-YGKEENEEDSGKKKHGGRPESGKDESEGSGMSDYLKLAQGFMKK 290
+ E G+KK SGHGGG YGKEE E+D KKKHG + SEG GM DYLKLAQG MKK
Sbjct: 314 EEEEGYKKPSGHGGGRYGKEEEEDDKKKKKHG-------EGSEG-GMGDYLKLAQGLMKK 365
Query: 289 DGEGG--SGAGMGDYLKLAEGFMKKR 218
G G G GMGDYLKLAEGF+KKR
Sbjct: 366 QGGEGESGGGGMGDYLKLAEGFLKKR 391
Score = 209 bits (526), Expect = 7e-54
Identities = 130/204 (63%), Positives = 149/204 (72%), Gaps = 63/204 (30%)
Frame = -3
Query: 901 YEEDDGYKKKPSAGGYGDGGGY---EDEYKKRPT----GGHGGGRYEEDDEYKKKPT-GG 746
YEE+D YKKKP++GG G GGG ED+YKK+P+ GG+GGGRYEE+DEY+KKP+ GG
Sbjct: 159 YEEEDNYKKKPTSGGGGYGGGMYEEEDDYKKKPSSGGGGGYGGGRYEEEDEYRKKPSGGG 218
Query: 745 HGGGRYEE----------------------DDEYKRPSGGGH-GGRYEEED-YKKKPSG- 641
+GGGRYEE +DEYK+ GGGH GGRYEE+D Y KKPSG
Sbjct: 219 YGGGRYEEEEDDYMKKPSAGAGGYGGGGRYEDEYKKKPGGGHGGGRYEEDDEYNKKPSGG 278
Query: 640 -----------GGRYEEDDYKKKPS-----GGGRYEEDDYKKKPS--GGSHGGKDESEG- 518
GGRYEEDDYKKKPS GGGRYEE++ KKPS GG GK+E E
Sbjct: 279 YGYGASSGGGHGGRYEEDDYKKKPSAHSGGGGGRYEEEEGYKKPSGHGGGRYGKEEEEDD 338
Query: 517 -----------GGFGDYLKLAQGFMKKQDGEGGHKKTSGHGGGYGKEENEEDSGKKKHGG 371
GG GDYLKLAQG MKKQ GEG
Sbjct: 339 KKKKKHGEGSEGGMGDYLKLAQGLMKKQGGEG---------------------------- 370
Query: 370 RPESGKDESEGSGMSDYLKLAQGFMKK 290
ES G GM DYLKLA+GF+KK
Sbjct: 371 -------ESGGGGMGDYLKLAEGFLKK 390
9634.m05009|protein transposon protein, putative, CACTA, En/Spm
sub-class
Length = 246
Score = 69.9 bits (168), Expect = 6e-12
Identities = 71/202 (35%), Positives = 78/202 (38%), Gaps = 3/202 (1%)
Frame = -3
Query: 862 GGYGDGGGYEDEYKKRPTGGHGGGRYEEDDEYKKKPTGGHGGGRYEEDDEYKRPSGGGHG 683
GGYG G GY Y GG GGG Y Y GG G G Y + Y +GGG G
Sbjct: 48 GGYGHGYGYGSGYGFG-NGGVGGGGYGGGGGYGSG--GGEGNGAYGQGYGYGSGNGGGGG 104
Query: 682 GRYEEEDYKKKPSGGGRYEEDDYKKKPSGGGRYEEDDYKKKPSGGSHGGKDESEGGGFGD 503
G Y GGG Y GGG DY + GG HGG GGG
Sbjct: 105 GGY-------GGGGGGSYGSGG-MGSGYGGGYGSGYDYGGQGGGGGHGG----GGGGGSG 152
Query: 502 YLKLAQGFMKKQDGEGGHKKTSGHGGGYGKEENEEDSGKKKHGGRPESGKDESEGSGMSD 323
Y G GG+ SG G GYG SG +GG SG G G S
Sbjct: 153 Y------------GNGGY--GSGFGEGYG-------SGGGVNGG-GGSGGGGGGGGGASG 190
Query: 322 Y---LKLAQGFMKKDGEGGSGAGMG 257
Y +G+ G GG G G G
Sbjct: 191 YRYGAGYGKGYGYGGGPGGGGGGAG 215
9629.m00785|protein transposon protein, putative, CACTA, En/Spm
sub-class
Length = 520
Score = 67.1 bits (161), Expect = 4e-11
Identities = 71/209 (33%), Positives = 79/209 (36%), Gaps = 12/209 (5%)
Frame = +3
Query: 222 FFMNPS---ASFK*SP-IPAPLPPSPSFFMKPCASFR*SDMPLPSDSSFPLSGRPPCFFL 389
FF P A+F+ P +PA PPSP P S P PS S P S PP
Sbjct: 359 FFARPPVNCAAFQCKPFVPALPPPSPPPPSPPPPSPPPPSPPPPSTSPPPPSPPPP---- 414
Query: 390 PLSSSFSSLPYPPPWPLVFLCPPSPSCFFMKPCASFK*SPKPPPSDSSFPPW--LPPLGF 563
S P PP P PP P P PPP+ PP LPP
Sbjct: 415 ------SPPPPSPPPPAPIFHPPQPP------------PPPPPPAPQPHPPCPELPPP-- 454
Query: 564 FL*SSSSYLPPPLGFFL*SSSSYLPPPLGFFL*SSSSYRPPWPPPLGLLYSSSSSYLPPP 743
PPP PPP G ++ + PP PPP Y P P
Sbjct: 455 ---------PPP------------PPPCGG---ATPALSPPPPPP----------YYPGP 480
Query: 744 WPPVGFFLYSSSSSYLPPP------WPPVGLFLYSSSYPPP 848
WPPV Y S PPP WPP+ Y S PPP
Sbjct: 481 WPPVHGVPYGSPP---PPPLQHHSSWPPIHSVPYGSPPPPP 518
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65598861
Number of Sequences: 59712
Number of extensions: 2624522
Number of successful extensions: 24637
Number of sequences better than 1.0e-10: 6
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 24346
Number of HSP's gapped (non-prelim): 42
length of query: 307
length of database: 26,991,925
effective HSP length: 51
effective length of query: 255
effective length of database: 23,946,613
effective search space: 6106386315
effective search space used: 6106386315
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG680 Members:414 3pri:Y 1e-176
AAK32118.1 plasmalemma H+-ATPase 1 [Hordeum vulgare]
(3411 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9632.m05471|protein plasma-membrane proton-efflux P-type ... 1775 0.0
9640.m04351|protein plasma-membrane proton-efflux P-type ... 1548 0.0
9635.m00896|protein plasma-membrane proton-efflux P-type ... 1543 0.0
9636.m01434|protein plasma-membrane proton-efflux P-type ... 1514 0.0
9631.m04701|protein plasma-membrane proton-efflux P-type ... 1495 0.0
9630.m05505|protein plasma-membrane proton-efflux P-type ... 1478 0.0
9633.m02301|protein plasma-membrane proton-efflux P-type ... 1436 0.0
9631.m00012|protein plasma-membrane proton-efflux P-type ... 1412 0.0
9634.m00768|protein plasma-membrane proton-efflux P-type ... 1389 0.0
9634.m00767|protein plasma-membrane proton-efflux P-type ... 1388 0.0
9631.m00801|protein plasma-membrane proton-efflux P-type ... 1304 0.0
9639.m02667|protein E1-E2 ATPase, putative 357 6e-98
9639.m02689|protein E1-E2 ATPase, putative 313 1e-84
9629.m07280|protein hypothetical protein 203 1e-51
9640.m00336|protein calcium-translocating P-type ATPase, ... 195 5e-49
9633.m03896|protein calcium-translocating P-type ATPase, ... 191 7e-48
9631.m00071|protein E1-E2 ATPase, putative 182 3e-45
9636.m04100|protein calcium-translocating P-type ATPase, ... 176 3e-43
9630.m00757|protein calcium-translocating P-type ATPase, ... 174 8e-43
9631.m00793|protein AJ315791 SAP-like protein 167 1e-40
9632.m05471|protein plasma-membrane proton-efflux P-type ATPase
Length = 951
Score = 1775 bits (4548), Expect = 0.0
Identities = 883/951 (92%), Positives = 923/951 (96%)
Frame = +2
Query: 161 MGGLEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLK 340
MGGLEEI+NEAVDLENIPIEEVFEQLKCTR+GL+S+EG +R+E+FG NKLEEKKESK+LK
Sbjct: 1 MGGLEEIKNEAVDLENIPIEEVFEQLKCTREGLSSEEGNRRIEMFGPNKLEEKKESKILK 60
Query: 341 FLGFMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEENNAGNA 520
FLGFMWNPLSWVMEMAAIMAIALANGGGKPPDW+DFVGIIVLLVINSTISFIEENNAGNA
Sbjct: 61 FLGFMWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEENNAGNA 120
Query: 521 AAALMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLKIDQSG 700
AAALMANLAPKTKVLRDGRWGEQEA+ILVPGDI+SIKLGDIVPADARLLEGDPLKIDQS
Sbjct: 121 AAALMANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSA 180
Query: 701 LTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQQVL 880
LTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ VL
Sbjct: 181 LTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQTVL 240
Query: 881 TAIGNFCIISIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSVTMAIG 1060
TAIGNFCI SIAVGIVIEIIVMFPIQ R YR+GIENLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 241 TAIGNFCICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMPTVLSVTMAIG 300
Query: 1061 SHKLSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHVLL 1240
SHKLSQQGAITKRMTAIEE+AGMDVLCSDKTGTLTLNKLSVDKNLVEVF KGVDK+HVLL
Sbjct: 301 SHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDKDHVLL 360
Query: 1241 LAARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHR 1420
LAARASR ENQDAIDA MVGMLADPKEARAGIREVHFLPFNP DKRTALTYIDA+GNWHR
Sbjct: 361 LAARASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWHR 420
Query: 1421 ASKGAPEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSAGGPWQFI 1600
ASKGAPEQI+TLCNCKEDVKRKVH+VI+KYAERGLRSLAVARQEVPEKSK+SAGGPWQF+
Sbjct: 421 ASKGAPEQILTLCNCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGGPWQFV 480
Query: 1601 GLLPLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ 1780
GLLPLFDPPRHDSAETIRKAL LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ
Sbjct: 481 GLLPLFDPPRHDSAETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ 540
Query: 1781 SKDGSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKAD 1960
+KD SLE+LPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKAD
Sbjct: 541 NKDASLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKAD 600
Query: 1961 IGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGF 2140
IGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGF
Sbjct: 601 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGF 660
Query: 2141 LLIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVLGTYL 2320
LLIALIWK+DF+PFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL EIFATG+VLG+YL
Sbjct: 661 LLIALIWKYDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGSYL 720
Query: 2321 ALMTVVFFWIIHRTDFFTNKFGVRSIRENETEKMSALYLQVSIVSQALIFVTRSRSWSFV 2500
ALMTV+FFW +H+TDFFT+KFGVRSIR +E E MSALYLQVSIVSQALIFVTRSRSWSF+
Sbjct: 721 ALMTVIFFWAMHKTDFFTDKFGVRSIRNSEHEMMSALYLQVSIVSQALIFVTRSRSWSFI 780
Query: 2501 ERPGFLLVIAFLLAQLVATLIAVYANWGFARISGIGWGWAGVIWLFSIVFYFPLDIFKFF 2680
ERPG LLV AF+LAQLVAT +AVYANWGFARI GIGWGWAGVIWL+SIVFYFPLDIFKFF
Sbjct: 781 ERPGLLLVTAFMLAQLVATFLAVYANWGFARIKGIGWGWAGVIWLYSIVFYFPLDIFKFF 840
Query: 2681 IRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKS 2860
IRFVLSGRAWDNLL+NK AFTTK++YG+ EREAQWATAQRTLHGLQ PE AS+TLFNDKS
Sbjct: 841 IRFVLSGRAWDNLLENKIAFTTKKDYGREEREAQWATAQRTLHGLQPPEVASNTLFNDKS 900
Query: 2861 SYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 3013
SYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTI QNYTV
Sbjct: 901 SYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQNYTV 951
9640.m04351|protein plasma-membrane proton-efflux P-type ATPase
Length = 956
Score = 1548 bits (3963), Expect = 0.0
Identities = 764/950 (80%), Positives = 863/950 (90%), Gaps = 4/950 (0%)
Frame = +2
Query: 164 GGLEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLKF 343
G L+ + EAVDLENIP+EEVFE L+C+R+GLT+ + QR+EIFG NKLEEK+ESK LKF
Sbjct: 6 GNLDAVLKEAVDLENIPLEEVFENLRCSREGLTTQQAQQRLEIFGPNKLEEKEESKFLKF 65
Query: 344 LGFMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEENNAGNAA 523
LGFMWNPLSWVME AAIMAIALANGGGKPPDWQDFVGII LLVINSTISFIEENNAGNAA
Sbjct: 66 LGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAA 125
Query: 524 AALMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLKIDQSGL 703
AALMA LAPK KVLRDGRW E+EA+ILVPGDIVSIKLGDI+PADARLLEGDPLKIDQS L
Sbjct: 126 AALMARLAPKAKVLRDGRWTEEEAAILVPGDIVSIKLGDIIPADARLLEGDPLKIDQSAL 185
Query: 704 TGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQQVLT 883
TGESLPVTK PGD V+SGST KQGEIEA+VIATGVHTFFGKAAHLVDSTNQVGHFQ+VLT
Sbjct: 186 TGESLPVTKGPGDGVYSGSTVKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 245
Query: 884 AIGNFCIISIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSVTMAIGS 1063
AIGNFCI SIAVG+ +EIIVM+PIQ R YR GI+NLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 246 AIGNFCICSIAVGMFVEIIVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305
Query: 1064 HKLSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHVLLL 1243
H+LSQQGAITKRMTAIEE+AGMDVLCSDKTGTLTLNKL+VDKNL++VF +G+ ++ V+L+
Sbjct: 306 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIDVFERGITQDQVILM 365
Query: 1244 AARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRA 1423
AARASR ENQDAID +VGMLADPKEARAGI+EVHFLPFNPTDKRTALTYID +G +R
Sbjct: 366 AARASRTENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDGDGKMYRV 425
Query: 1424 SKGAPEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSAGGPWQFIG 1603
SKGAPEQI+ L + K +++R+VH+VI+K+AERGLRSLAVA QEVPE +K+S GGPW F+G
Sbjct: 426 SKGAPEQILHLAHNKPEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESPGGPWHFVG 485
Query: 1604 LLPLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQS 1783
L+PLFDPPRHDSAETIR+AL LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ+
Sbjct: 486 LMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQN 545
Query: 1784 KDGSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADI 1963
KD S+ +LPVD+LIEKADGFAGVFPEHKYEIVKRLQ +KHI GMTGDGVNDAPALKKADI
Sbjct: 546 KDESIAALPVDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI 605
Query: 1964 GIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFL 2143
GIAV DATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIRIVLGF+
Sbjct: 606 GIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 665
Query: 2144 LIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVLGTYLA 2323
L+ALIWKFDF PFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL EIF TGVVLG YLA
Sbjct: 666 LLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGGYLA 725
Query: 2324 LMTVVFFWIIHRTDFFTNKFGVRSIR---ENETEKM-SALYLQVSIVSQALIFVTRSRSW 2491
+MTV+FFW ++TDFF F V S+ +++ +K+ SA+YLQVS +SQALIFVTRSRSW
Sbjct: 726 MMTVIFFWAAYKTDFFPRIFHVESLEKTAQDDFQKLASAVYLQVSTISQALIFVTRSRSW 785
Query: 2492 SFVERPGFLLVIAFLLAQLVATLIAVYANWGFARISGIGWGWAGVIWLFSIVFYFPLDIF 2671
SFVERPGFLLV AFL+AQL+ATLIAVYA+W F I GIGWGWAG++WL++++FYFPLDI
Sbjct: 786 SFVERPGFLLVFAFLVAQLIATLIAVYADWAFTSIKGIGWGWAGIVWLYNLIFYFPLDII 845
Query: 2672 KFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFN 2851
KF IR+ LSG+AWD +++ + AFT K+++GK ERE +WA AQRTLHGLQ P+ +F+
Sbjct: 846 KFLIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLQPPDA---KMFS 902
Query: 2852 DKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 3013
+K+ Y EL+++AE+AKRRAEIARLREL+TLKGHVESVVKLKGLDI+TI Q+YTV
Sbjct: 903 EKAGYNELNQMAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQSYTV 956
9635.m00896|protein plasma-membrane proton-efflux P-type ATPase
Length = 957
Score = 1543 bits (3952), Expect = 0.0
Identities = 762/948 (80%), Positives = 859/948 (90%), Gaps = 4/948 (0%)
Frame = +2
Query: 170 LEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLKFLG 349
LE + NE+VDLENIP+EEVFE L+C R+GLTS QR+ +FG N+LEEKKESK LKFLG
Sbjct: 8 LEAVLNESVDLENIPLEEVFEHLRCNREGLTSANAEQRLNLFGPNRLEEKKESKFLKFLG 67
Query: 350 FMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA 529
FMWNPLSWVME AAIMAIALANGGGKPPDWQDFVGII LL+INSTISFIEENNAGNAAAA
Sbjct: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENNAGNAAAA 127
Query: 530 LMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLKIDQSGLTG 709
LMA LAPK KVLR+GRW E+EA+ILVPGDI+S+KLGDI+PADARLLEGDPLKIDQS LTG
Sbjct: 128 LMARLAPKAKVLRNGRWSEEEAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTG 187
Query: 710 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQQVLTAI 889
ESLPVTK PGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ+VLTAI
Sbjct: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 247
Query: 890 GNFCIISIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSVTMAIGSHK 1069
GNFCI SIA+G+V+EIIVM+PIQ R YR GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 248 GNFCICSIAIGMVVEIIVMYPIQHRDYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
Query: 1070 LSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHVLLLAA 1249
L+QQGAITKRMTAIEE+AGMDVLCSDKTGTLTLNKL+VDK+L+EVF +GVD++ V+L+AA
Sbjct: 308 LAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLIEVFQRGVDQDTVILMAA 367
Query: 1250 RASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRASK 1429
RASR ENQDAIDA +VGMLADPKEARAGI+EVHFLPFNPTDKRTALTYID EG HR SK
Sbjct: 368 RASRTENQDAIDATIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDGEGKMHRVSK 427
Query: 1430 GAPEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSAGGPWQFIGLL 1609
GAPEQI+ L + K +++R+V +VI+K+AERGLRSL VA Q+VP+ K+S GGPWQF+GLL
Sbjct: 428 GAPEQILNLAHNKTEIERRVRAVIDKFAERGLRSLGVAYQQVPDGRKESPGGPWQFVGLL 487
Query: 1610 PLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQSKD 1789
PLFDPPRHDSAETIR+AL LGVNVKMITGDQLAIGKET RRLGMGTNMYPSSALLGQ KD
Sbjct: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETARRLGMGTNMYPSSALLGQDKD 547
Query: 1790 GSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGI 1969
S+ +LPVDELIEKADGFAGVFPEHKYEIVKRLQ +KHI GMTGDGVNDAPALKKADIGI
Sbjct: 548 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
Query: 1970 AVDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFLLI 2149
AVDD+TDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIRIVLGF+L+
Sbjct: 608 AVDDSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL 667
Query: 2150 ALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVLGTYLALM 2329
ALIWKFDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVVLG+YLA+M
Sbjct: 668 ALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLSEIFATGVVLGSYLAMM 727
Query: 2330 TVVFFWIIHRTDFFTNKFGVRSIR---ENETEKM-SALYLQVSIVSQALIFVTRSRSWSF 2497
TV+FFW+ ++TDFF F V S+ +++ +K+ SA+YLQVS +SQALIFVTRSRSWSF
Sbjct: 728 TVIFFWVAYKTDFFPRVFHVESLEKTAQDDFQKLASAVYLQVSTISQALIFVTRSRSWSF 787
Query: 2498 VERPGFLLVIAFLLAQLVATLIAVYANWGFARISGIGWGWAGVIWLFSIVFYFPLDIFKF 2677
VERPGFLLV AF +AQL+ATLIAVYANWGFA I GIGWGWAGVIWL++IVFY PLDI KF
Sbjct: 788 VERPGFLLVFAFFVAQLIATLIAVYANWGFASIKGIGWGWAGVIWLYNIVFYLPLDIIKF 847
Query: 2678 FIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDK 2857
IR+ LSGRAWD +L+ + AFT K+++G E + +WATAQRT+HGLQ A+ +F D
Sbjct: 848 LIRYALSGRAWDLVLEQRIAFTRKKDFGTQENQLKWATAQRTIHGLQ--PAATAAVFRDM 905
Query: 2858 SSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 3013
+SY +L+++AE+A+RRAEIARLREL TLKG +ESVVK KGLD++TI Q+YTV
Sbjct: 906 TSYNDLNQLAEEARRRAEIARLRELTTLKGRMESVVKQKGLDLETIQQSYTV 957
9636.m01434|protein plasma-membrane proton-efflux P-type ATPase
Length = 954
Score = 1514 bits (3876), Expect = 0.0
Identities = 748/953 (78%), Positives = 848/953 (88%), Gaps = 4/953 (0%)
Frame = +2
Query: 155 SAMGGLEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKV 334
S LE+I+NEAVDLE+IP+EEVF+ LKCTR+GLT+ EG R ++FG NKLEEKKESK+
Sbjct: 7 STADALEQIKNEAVDLEHIPLEEVFQHLKCTREGLTNAEGDARTQVFGPNKLEEKKESKI 66
Query: 335 LKFLGFMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEENNAG 514
LKFLGFMWNPLSWVME+AAIMAIALANGGG+PPDWQDFVGII LL+INSTIS+ EE+NAG
Sbjct: 67 LKFLGFMWNPLSWVMEVAAIMAIALANGGGRPPDWQDFVGIIALLLINSTISYWEESNAG 126
Query: 515 NAAAALMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLKIDQ 694
+AAAALM NLAPKTKVLRDGRW E +A +LVPGD++++KLGDIVPADARLL+GDPLKIDQ
Sbjct: 127 SAAAALMKNLAPKTKVLRDGRWSETDAFVLVPGDVINVKLGDIVPADARLLDGDPLKIDQ 186
Query: 695 SGLTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQQ 874
S LTGESLPVTK PGD V+SGSTCKQGEI+AVVIATGVHTFFGKAAHLVD+TNQVGHFQ+
Sbjct: 187 SALTGESLPVTKLPGDCVYSGSTCKQGEIDAVVIATGVHTFFGKAAHLVDTTNQVGHFQK 246
Query: 875 VLTAIGNFCIISIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSVTMA 1054
VL AIGNFCI +IA+G+ +E+IVM+ IQ R YR GI+NLLVLLIGGIPIAMPTVLSVTMA
Sbjct: 247 VLRAIGNFCIGAIAIGMAVEVIVMYLIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 306
Query: 1055 IGSHKLSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHV 1234
IGSH+LS QGAITKRMTAIEE+A MDVLCSDKTGTLTLNKLSVD+ L+EVF +GV K+ V
Sbjct: 307 IGSHRLSDQGAITKRMTAIEEMAAMDVLCSDKTGTLTLNKLSVDRGLIEVFVQGVAKDEV 366
Query: 1235 LLLAARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYID-AEGN 1411
+LL ARASRVENQDAID MVGML DPKEARAGIRE HFLPFNP DKRTALTY+D A+G+
Sbjct: 367 ILLTARASRVENQDAIDTAMVGMLDDPKEARAGIREEHFLPFNPVDKRTALTYVDLADGS 426
Query: 1412 WHRASKGAPEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSAGGPW 1591
WHR I+ LC C++DV+ KVH++I++YA+RGLRSLAVARQEVPE+ KD GGPW
Sbjct: 427 WHR--------ILDLCKCRQDVRSKVHAIIDRYADRGLRSLAVARQEVPERRKDGPGGPW 478
Query: 1592 QFIGLLPLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 1771
+F+GLLPL DPPRHDSAETIR+AL LGVNVKMITGDQLAI KETGRRLGMG NMYPSSAL
Sbjct: 479 EFVGLLPLLDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGVNMYPSSAL 538
Query: 1772 LGQSKDGSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALK 1951
LGQSKD S+ S+PVDELI+KADGFAGVFPEHKYEIVK+LQE KHI GMTGDGVNDAPALK
Sbjct: 539 LGQSKDESIASVPVDELIKKADGFAGVFPEHKYEIVKKLQEMKHICGMTGDGVNDAPALK 598
Query: 1952 KADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIV 2131
+ADIGIAV DATDAARSASDIVLT+PGLSVIISAVLTSR IFQRMKNYTIYAVSITIRIV
Sbjct: 599 RADIGIAVADATDAARSASDIVLTQPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 658
Query: 2132 LGFLLIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVLG 2311
LGF+LIALIWKFDF+PFM+L+IAILNDGTIMTISKDRVKPSP PDSWKL EIF TG+V G
Sbjct: 659 LGFMLIALIWKFDFSPFMILVIAILNDGTIMTISKDRVKPSPHPDSWKLPEIFITGIVYG 718
Query: 2312 TYLALMTVVFFWIIHRTDFFTNKFGVRSIRENETEKMSALYLQVSIVSQALIFVTRSRSW 2491
TYLA+MTV+FFW + TDFFT+ F V+ + E + E MSALYLQVSI+SQALIFVTRSRSW
Sbjct: 719 TYLAVMTVLFFWAMRSTDFFTSTFHVKPLMEKD-EMMSALYLQVSIISQALIFVTRSRSW 777
Query: 2492 SFVERPGFLLVIAFLLAQLVATLIAVYANWGFARISGIGWGWAGVIWLFSIVFYFPLDIF 2671
FVERPG LL AF+ AQ++ATL+ VYA GFA I GIGWGWAGVIWL+SIV + PLDIF
Sbjct: 778 CFVERPGMLLCGAFVAAQIIATLVTVYATLGFAHIKGIGWGWAGVIWLYSIVTFLPLDIF 837
Query: 2672 KFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASH---T 2842
KF +R+ LSGRAWD L+++K AFT+K++YG+GEREAQWATAQRTLHGLQ PE H
Sbjct: 838 KFAVRYALSGRAWDTLIEHKIAFTSKKDYGRGEREAQWATAQRTLHGLQTPEMGDHLGGV 897
Query: 2843 LFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 3013
++SSYRELSEIAEQAKRRAE+ARLREL+TLKG +ES V+LKGLD+D + +YTV
Sbjct: 898 GGGERSSYRELSEIAEQAKRRAEVARLRELSTLKGQMESTVRLKGLDMDNVQHHYTV 954
9631.m04701|protein plasma-membrane proton-efflux P-type ATPase
Length = 1000
Score = 1495 bits (3828), Expect = 0.0
Identities = 757/950 (79%), Positives = 855/950 (89%), Gaps = 48/950 (5%)
Frame = +2
Query: 164 GGLEEIRNEAVDL--ENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVL 337
GGL+ + E+VDL ENIPIEEVF+ LKC RQGLTS+E R+++FG NKLEEK+ESK L
Sbjct: 6 GGLDAVLKESVDLVLENIPIEEVFQNLKCCRQGLTSEEAQLRLQLFGPNKLEEKEESKFL 65
Query: 338 KFLGFMWNPLSWVMEMAAIMAIALANGGG---KPPDWQDFVGIIVLLVINSTISFIEENN 508
KFLGFMWNPLSWVME AAIMAIALANGGG KPPDWQDFVGII LL+INSTISFIEENN
Sbjct: 66 KFLGFMWNPLSWVMEAAAIMAIALANGGGNCGKPPDWQDFVGIITLLLINSTISFIEENN 125
Query: 509 AGNAAAALMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLKI 688
AGNAAAALMA LAPK KVLR+G W E+EA+ILVPGDI+SIKLGDI+PADARLLEGDPLKI
Sbjct: 126 AGNAAAALMARLAPKAKVLRNGSWTEEEAAILVPGDIISIKLGDIIPADARLLEGDPLKI 185
Query: 689 DQSGLTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 868
DQS LTGESLP TK PGD V+SGST KQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF
Sbjct: 186 DQSALTGESLPATKGPGDGVYSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 245
Query: 869 QQ----------VLTAIGNFCIISIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIP 1018
Q+ VLTAIGNFCI SIAVG+ +EIIVM+PIQ R YR GI+NLLVLLIGGIP
Sbjct: 246 QKARLRSLTSVHVLTAIGNFCICSIAVGMFVEIIVMYPIQHRPYRPGIDNLLVLLIGGIP 305
Query: 1019 IAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLV 1198
IAMPTVLSVTMAIGSH+LSQQGAITKRMTAIEE+AGMDVLCSDKTGTLTLNKL+VDKNL+
Sbjct: 306 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLI 365
Query: 1199 EVFAKGVDKEHVLLLAARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKR 1378
E+F +GV ++ V+L+AARASR ENQDAID +VGMLADPKEARAGI+EVHFLPFNPTDKR
Sbjct: 366 EIFERGVTQDQVILMAARASRTENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKR 425
Query: 1379 TALTYIDAEGNWHRASKGAPEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVP 1558
TALTYID++G +R SKGAPEQI+ L + K ++R+VH+VI+K+AERGLRSLAVA QEVP
Sbjct: 426 TALTYIDSDGKMYRVSKGAPEQILNLAHNKTQIERRVHAVIDKFAERGLRSLAVAYQEVP 485
Query: 1559 EKSKDSAGGPWQFIGLLPLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLG 1738
+ K+S GGPW+F+ LLPLFDPPRHDSAETIR+AL LGVNVKMITGDQLAIGKETGRRLG
Sbjct: 486 DGRKESPGGPWRFVALLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 545
Query: 1739 MGTNMYPSSALLGQSKDGSLESLPVDELIEKADGFAGVFP-------------------- 1858
MGTNMYPSSALLGQ+KD S+ +LPVD+LIEKADGFAGVFP
Sbjct: 546 MGTNMYPSSALLGQNKDESVAALPVDDLIEKADGFAGVFPGLYAINCRIKTKWLKVTKKN 605
Query: 1859 ---------EHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIAVDDATDAARSASD 2011
EHKYEIVKRLQ +KHI GMTGDGVNDAPALKKADIGIAV DATDAARSASD
Sbjct: 606 ITVKFSLFSEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 665
Query: 2012 IVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFLLIALIWKFDFAPFMVL 2191
IVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIRIV GF+L+ALIW+FDF PFMVL
Sbjct: 666 IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLLALIWEFDFPPFMVL 725
Query: 2192 IIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVLGTYLALMTVVFFWIIHRTDFF 2371
IIAILNDGTIMTISKD VKPSPLPDSWKL EIF TGVVLG YLA+MTV+FFW ++T+FF
Sbjct: 726 IIAILNDGTIMTISKDLVKPSPLPDSWKLAEIFTTGVVLGGYLAMMTVIFFWAAYKTNFF 785
Query: 2372 TNKFGVRSIR---ENETEKM-SALYLQVSIVSQALIFVTRSRSWSFVERPGFLLVIAFLL 2539
F V S+ +++ +K+ SA+YLQVS +SQALIFVTRSRSWSF+ERPGFLLV AF +
Sbjct: 786 PRIFHVESLEKTAQDDYQKLASAVYLQVSTISQALIFVTRSRSWSFIERPGFLLVFAFFV 845
Query: 2540 AQLVATLIAVYANWGFARISGIGWGWAGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNL 2719
AQL+ATLIAVYANW F I GIGWGWAG++WL+++VFYFPLDI KF IR+ LSG+AWD +
Sbjct: 846 AQLIATLIAVYANWAFTSIKGIGWGWAGIVWLYNLVFYFPLDIIKFLIRYALSGKAWDLV 905
Query: 2720 LQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAK 2899
++ + AFT K+++GK ERE +WA A RTLHGLQ P+ F +K+ Y EL+++AE+AK
Sbjct: 906 IEQRIAFTRKKDFGKEERELKWAHAHRTLHGLQPPDAKP---FPEKTGYSELNQMAEEAK 962
Query: 2900 RRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 3013
RRAEIARLREL+TLKGHVESVVKLKGLDIDTI+Q+YTV
Sbjct: 963 RRAEIARLRELHTLKGHVESVVKLKGLDIDTIHQSYTV 1000
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 220200204
Number of Sequences: 59712
Number of extensions: 6320908
Number of successful extensions: 31946
Number of sequences better than 1.0e-10: 58
Number of HSP's better than 0.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 31768
Number of HSP's gapped (non-prelim): 93
length of query: 1137
length of database: 26,991,925
effective HSP length: 54
effective length of query: 1082
effective length of database: 23,767,477
effective search space: 25716410114
effective search space used: 25716410114
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 163 (67.9 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG681 Members:163 3pri:Y 1e-134
AAN86274.1 non-cell-autonomous heat shock cognate protein 70
[Cucurbita maxima]
(2288 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9639.m04467|protein dnaK-type molecular chaperone hsp70 -... 1235 0.0
9631.m05972|protein heat shock protein cognate 70 1226 0.0
9633.m03578|protein dnaK protein 1215 0.0
9629.m06146|protein dnaK protein 1215 0.0
9631.m01647|protein dnaK protein 1215 0.0
9631.m01656|protein heat shock cognate 70 kda protein 1160 0.0
9639.m04468|protein dnaK-type molecular chaperone hsp70 -... 1125 0.0
9633.m03577|protein dnaK protein 1049 0.0
9630.m00144|protein dnaK-type molecular chaperone BiP - rice 829 0.0
9631.m04907|protein putative luminal binding protein 779 0.0
9633.m03294|protein luminal binding protein 5 precursor (... 778 0.0
9631.m01650|protein dnaK protein 776 0.0
9636.m04621|protein BiP-isoform D 764 0.0
9633.m02768|protein luminal binding protein 4 precursor (... 736 0.0
9639.m00793|protein dnaK protein, putative 643 0.0
9629.m04774|protein dnaK protein 571 e-162
9639.m00795|protein Similar to dnaK-type molecular chaper... 569 e-162
9630.m05282|protein dnaK protein 563 e-160
9631.m00134|protein dnaK protein 559 e-159
9639.m00796|protein Similar to hsp70 554 e-157
9639.m04467|protein dnaK-type molecular chaperone hsp70 - rice
(fragment)
Length = 649
Score = 1235 bits (3161), Expect = 0.0
Identities = 614/647 (94%), Positives = 635/647 (97%), Gaps = 2/647 (0%)
Frame = +2
Query: 131 MAAKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN 310
MA KG+GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTDSERLIGDAAKN
Sbjct: 1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKN 60
Query: 311 QVAMNPINTVFDAKRLIGRRFTDSTVQSDIKLWPFKVVAGPGDKPMINVQYKGEEKQFAA 490
QVAMNPINTVFDAKRLIGRRF+D++VQSDIKLWPFKV+AGPGDKPMI VQYKGEEKQFAA
Sbjct: 61 QVAMNPINTVFDAKRLIGRRFSDASVQSDIKLWPFKVIAGPGDKPMIVVQYKGEEKQFAA 120
Query: 491 EEISSMVLIKMREIAEAFLGTTVKNAVVTVPAYFNDSQRQATKDAGVIAGINVLRIINEP 670
EEISSMVLIKMREIAEA+LGTT+KNAVVTVPAYFNDSQRQATKDAGVIAG+NV+RIINEP
Sbjct: 121 EEISSMVLIKMREIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP 180
Query: 671 TAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 850
TAAAIAYGLDKKA+SVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
Sbjct: 181 TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 240
Query: 851 NRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGIDFY 1030
NRMVNHFVQEFKRKNKKDI+GNPRALRRLRT+CERAKRTLSSTAQTTIEIDSL+EGIDFY
Sbjct: 241 NRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY 300
Query: 1031 STITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFF 1210
STITRARFEE+NMDLFRKCMEPVEKCLRDAKMDKS+VHDVVLVGGSTRIPRVQQLLQDFF
Sbjct: 301 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPRVQQLLQDFF 360
Query: 1211 NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI 1390
NGKELCK+INPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
Sbjct: 361 NGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI 420
Query: 1391 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 1570
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
Sbjct: 421 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 480
Query: 1571 TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKK 1750
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKK
Sbjct: 481 TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKK 540
Query: 1751 KVESKNALENYSYNMRNTIKDEKIASKLPADDKKKIEEAIDAAIQWLDANQLAEADEFED 1930
KVESKNALENY+YNMRNTIKDEKIASKLPA DKKKIE+AID AIQWLD NQLAEADEF+D
Sbjct: 541 KVESKNALENYAYNMRNTIKDEKIASKLPAADKKKIEDAIDQAIQWLDGNQLAEADEFDD 600
Query: 1931 KMKELEALCNPIIAKMYQGAGADMEGGMDDD--TPAASGGAGPKIEEVD 2071
KMKELE +CNPIIAKMYQGAGADM GGMD+D PA GAGPKIEEVD
Sbjct: 601 KMKELEGICNPIIAKMYQGAGADMAGGMDEDDAPPAGGSGAGPKIEEVD 649
9631.m05972|protein heat shock protein cognate 70
Length = 649
Score = 1226 bits (3137), Expect = 0.0
Identities = 606/644 (94%), Positives = 634/644 (98%), Gaps = 1/644 (0%)
Frame = +2
Query: 140 KGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVA 319
KG+GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVA
Sbjct: 5 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVA 64
Query: 320 MNPINTVFDAKRLIGRRFTDSTVQSDIKLWPFKVVAGPGDKPMINVQYKGEEKQFAAEEI 499
MNPINTVFDAKRLIGRRF+D++VQSDIK+WP+KV+ GPGDKPMI VQYKGEEKQF+AEEI
Sbjct: 65 MNPINTVFDAKRLIGRRFSDASVQSDIKMWPYKVIPGPGDKPMIVVQYKGEEKQFSAEEI 124
Query: 500 SSMVLIKMREIAEAFLGTTVKNAVVTVPAYFNDSQRQATKDAGVIAGINVLRIINEPTAA 679
SSMVLIKMREIAEA+LG+TVKNAVVTVPAYFNDSQRQATKDAGVIAG+NV+RIINEPTAA
Sbjct: 125 SSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAA 184
Query: 680 AIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM 859
AIAYGLDKKA+SVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR+
Sbjct: 185 AIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRL 244
Query: 860 VNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGIDFYSTI 1039
VNHFVQEFKRK+KKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEG+DFYSTI
Sbjct: 245 VNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGVDFYSTI 304
Query: 1040 TRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFFNGK 1219
TRARFEE+NMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFFNGK
Sbjct: 305 TRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFFNGK 364
Query: 1220 ELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRN 1399
ELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRN
Sbjct: 365 ELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRN 424
Query: 1400 TTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVC 1579
TTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVC
Sbjct: 425 TTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVC 484
Query: 1580 FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVE 1759
FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQ+AEKYKSEDEEHKKKV+
Sbjct: 485 FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQDAEKYKSEDEEHKKKVD 544
Query: 1760 SKNALENYSYNMRNTIKDEKIASKLPADDKKKIEEAIDAAIQWLDANQLAEADEFEDKMK 1939
+KN+LENY+YNMRNTI+DEKIASKLPADDKKKIE+A++ AIQWLD NQLAE +EFEDKMK
Sbjct: 545 AKNSLENYAYNMRNTIQDEKIASKLPADDKKKIEDAVEQAIQWLDNNQLAEVEEFEDKMK 604
Query: 1940 ELEALCNPIIAKMYQGAGADMEGGMDDDTPAASG-GAGPKIEEVD 2071
ELE LCNPIIAKMYQGAGADM GGMDDD PAA G GAGPKIEEVD
Sbjct: 605 ELEGLCNPIIAKMYQGAGADMGGGMDDDAPAAGGSGAGPKIEEVD 649
9633.m03578|protein dnaK protein
Length = 646
Score = 1215 bits (3109), Expect = 0.0
Identities = 599/645 (92%), Positives = 627/645 (96%)
Frame = +2
Query: 137 AKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQV 316
+KG+GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQV
Sbjct: 2 SKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 61
Query: 317 AMNPINTVFDAKRLIGRRFTDSTVQSDIKLWPFKVVAGPGDKPMINVQYKGEEKQFAAEE 496
AMNP NTVFDAKRLIGRRF+D +VQSD+KLWPFKVV GPGDKPMI VQYKGEEKQFAAEE
Sbjct: 62 AMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVVPGPGDKPMIVVQYKGEEKQFAAEE 121
Query: 497 ISSMVLIKMREIAEAFLGTTVKNAVVTVPAYFNDSQRQATKDAGVIAGINVLRIINEPTA 676
ISSMVLIKMREIAEA+LG+++KNAVVTVPAYFNDSQRQATKDAGVIAG+NV+RIINEPTA
Sbjct: 122 ISSMVLIKMREIAEAYLGSSIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTA 181
Query: 677 AAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR 856
AAIAYGLDKKA+S GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR
Sbjct: 182 AAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR 241
Query: 857 MVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGIDFYST 1036
MVNHFVQEFKRKNKKDISGNPRALRRLRT+CERAKRTLSSTAQTTIEIDSL+EGIDFY+T
Sbjct: 242 MVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTT 301
Query: 1037 ITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFFNG 1216
ITRARFEE+NMDLFRKCMEPVEKCLRDAKMDKS+VHDVVLVGGSTRIP+VQQLLQDFFNG
Sbjct: 302 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNG 361
Query: 1217 KELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPR 1396
KELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPR
Sbjct: 362 KELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPR 421
Query: 1397 NTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 1576
NTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI V
Sbjct: 422 NTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQINV 481
Query: 1577 CFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKV 1756
CFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYK+EDEEHKKKV
Sbjct: 482 CFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKV 541
Query: 1757 ESKNALENYSYNMRNTIKDEKIASKLPADDKKKIEEAIDAAIQWLDANQLAEADEFEDKM 1936
++KNALENY+YNMRNTIKDEKIASKL ADDKK+IE+AID AI WLD NQLAEADEFEDKM
Sbjct: 542 DAKNALENYAYNMRNTIKDEKIASKLAADDKKRIEDAIDGAISWLDTNQLAEADEFEDKM 601
Query: 1937 KELEALCNPIIAKMYQGAGADMEGGMDDDTPAASGGAGPKIEEVD 2071
KELE +CNPIIAKMYQG GADM GGMD+D PA GAGPKIEEVD
Sbjct: 602 KELEGICNPIIAKMYQGPGADMAGGMDEDAPAGGSGAGPKIEEVD 646
9629.m06146|protein dnaK protein
Length = 648
Score = 1215 bits (3109), Expect = 0.0
Identities = 602/645 (93%), Positives = 630/645 (97%), Gaps = 2/645 (0%)
Frame = +2
Query: 137 AKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQV 316
AKG+GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQV
Sbjct: 2 AKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQV 61
Query: 317 AMNPINTVFDAKRLIGRRFTDSTVQSDIKLWPFKVVAGPGDKPMINVQYKGEEKQFAAEE 496
AMNPINTVFDAKRLIGRRF+D +VQSD+KLWPFKV+ GPGDKPMI VQYKGEEKQF+AEE
Sbjct: 62 AMNPINTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPGDKPMIVVQYKGEEKQFSAEE 121
Query: 497 ISSMVLIKMREIAEAFLGTTVKNAVVTVPAYFNDSQRQATKDAGVIAGINVLRIINEPTA 676
ISSMVLIKMREIAEA+LG+ +KNAVVTVPAYFNDSQRQATKDAGVIAG+NV+RIINEPTA
Sbjct: 122 ISSMVLIKMREIAEAYLGSNIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTA 181
Query: 677 AAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR 856
AAIAYGLDKKA+S GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR
Sbjct: 182 AAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR 241
Query: 857 MVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGIDFYST 1036
MVNHFV EFKRKNKKDISGNPRALRRLRT+CERAKRTLSSTAQTTIEIDSL+EGIDFYST
Sbjct: 242 MVNHFVLEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYST 301
Query: 1037 ITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFFNG 1216
ITRARFEE+NMDLFRKCMEPVEKCLRDAKMDKS+VHDVVLVGGSTRIP+VQQLLQDFFNG
Sbjct: 302 ITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNG 361
Query: 1217 KELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPR 1396
KELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPR
Sbjct: 362 KELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPR 421
Query: 1397 NTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITV 1576
NTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQITV
Sbjct: 422 NTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITV 481
Query: 1577 CFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKV 1756
CFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYK+EDEEHKKKV
Sbjct: 482 CFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKV 541
Query: 1757 ESKNALENYSYNMRNTIKDEKIASKLPADDKKKIEEAIDAAIQWLDANQLAEADEFEDKM 1936
++KNALENY+YNMRNTIKD+KIASKL ADDKKKIE+AID AI WLD+NQLAEADEFEDKM
Sbjct: 542 DAKNALENYAYNMRNTIKDDKIASKLSADDKKKIEDAIDGAINWLDSNQLAEADEFEDKM 601
Query: 1937 KELEALCNPIIAKMYQGAGADMEG--GMDDDTPAASGGAGPKIEEVD 2071
KELE++CNPIIAKMYQGAGADM G GMD+D PA GAGPKIEEVD
Sbjct: 602 KELESICNPIIAKMYQGAGADMGGAAGMDEDAPAGGSGAGPKIEEVD 648
9631.m01647|protein dnaK protein
Length = 650
Score = 1215 bits (3108), Expect = 0.0
Identities = 600/647 (92%), Positives = 633/647 (97%), Gaps = 3/647 (0%)
Frame = +2
Query: 131 MAAKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN 310
MA KGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN
Sbjct: 1 MAGKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN 60
Query: 311 QVAMNPINTVFDAKRLIGRRFTDSTVQSDIKLWPFKVVAGPGDKPMINVQYKGEEKQFAA 490
QVAMNPINTVFDAKRLIGRRF+D++VQSD KLWPFKV+ GPGDKPMI VQYKGEEKQF+A
Sbjct: 61 QVAMNPINTVFDAKRLIGRRFSDTSVQSDAKLWPFKVLPGPGDKPMIGVQYKGEEKQFSA 120
Query: 491 EEISSMVLIKMREIAEAFLGTTVKNAVVTVPAYFNDSQRQATKDAGVIAGINVLRIINEP 670
EEISSMVL KM+E AEA+LG+TVKNAVVTVPAYFNDSQRQATKDAGVI+G+NV+RIINEP
Sbjct: 121 EEISSMVLNKMKETAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP 180
Query: 671 TAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 850
TAAAIAYGLDKK+SSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
Sbjct: 181 TAAAIAYGLDKKSSSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 240
Query: 851 NRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGIDFY 1030
NRMVNHFVQEFKRKNKKDI+GNPRALRRLRT+CERAKRTLSSTAQTTIEIDSL+EGIDFY
Sbjct: 241 NRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY 300
Query: 1031 STITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFF 1210
+TITRARFEE+NMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFF
Sbjct: 301 TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFF 360
Query: 1211 NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI 1390
NGKELCKSINPDEAVAYGAAVQAAIL+GEGNEKVQDLLLLDVTPLS GLETAGGVMTVLI
Sbjct: 361 NGKELCKSINPDEAVAYGAAVQAAILTGEGNEKVQDLLLLDVTPLSQGLETAGGVMTVLI 420
Query: 1391 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 1570
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRT+DNNLLGKFELSGIPPAPRGVPQI
Sbjct: 421 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELSGIPPAPRGVPQI 480
Query: 1571 TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKK 1750
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKE+IEKMVQEAEKYK+EDEEHKK
Sbjct: 481 TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKAEDEEHKK 540
Query: 1751 KVESKNALENYSYNMRNTIKDEKIASKLPADDKKKIEEAIDAAIQWLDANQLAEADEFED 1930
KV++KN+LENY+YNMRNTIKD+KIASKLP DKKKIE+AID AI WLD+NQLAEA+EFED
Sbjct: 541 KVDAKNSLENYAYNMRNTIKDDKIASKLPEADKKKIEDAIDGAISWLDSNQLAEAEEFED 600
Query: 1931 KMKELEALCNPIIAKMYQGAGADMEGGMDDDTPAASGGA---GPKIEEVD 2071
KMKELE +CNPIIAKMYQGAGADM GGMD+D PAA+GG+ GPKIEEVD
Sbjct: 601 KMKELEGVCNPIIAKMYQGAGADMAGGMDEDAPAAAGGSSGPGPKIEEVD 650
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158082169
Number of Sequences: 59712
Number of extensions: 5037548
Number of successful extensions: 60242
Number of sequences better than 1.0e-10: 53
Number of HSP's better than 0.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 60064
Number of HSP's gapped (non-prelim): 54
length of query: 762
length of database: 26,991,925
effective HSP length: 53
effective length of query: 709
effective length of database: 23,827,189
effective search space: 16893477001
effective search space used: 16893477001
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 162 (67.5 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG685 Members:125 3pri:Y 1e-131
CAE01288.1 OSJNBa0020P07.5 [Oryza sativa (japonica
cultivar-group)]
(2872 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9630.m03028|protein AF367331 At1g56070/T6H22_13 1637 0.0
9632.m00189|protein Elongation factor G, domain IV, putative 1631 0.0
9629.m05250|protein Elongation factor G, domain IV, putative 1530 0.0
9629.m05092|protein Elongation factor G, domain IV, putative 1375 0.0
9634.m03897|protein Elongation factor G, domain IV, putative 615 e-176
9630.m03217|protein Similar to elongation factor EF-2 329 2e-89
9631.m04330|protein putative translation elongation factor 309 2e-83
9631.m03522|protein translation elongation factor G 136 2e-31
9634.m00447|protein Similar to GTP-binding membrane prote... 107 9e-23
9630.m01743|protein Elongation factor Tu GTP binding doma... 104 1e-21
9632.m04375|protein translation elongation factor G 101 5e-21
9630.m00559|protein Similar to GTP-binding protein LepA h... 100 2e-20
9629.m05356|protein Elongation factor Tu GTP binding doma... 97 1e-19
9630.m03028|protein AF367331 At1g56070/T6H22_13
Length = 843
Score = 1637 bits (4193), Expect = 0.0
Identities = 801/843 (95%), Positives = 826/843 (97%)
Frame = +1
Query: 25 MVKFTAEELRGIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 204
MVKFT EELR IMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR
Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 205 ADEAERGITIKSTGISLFYQMTPESLEMYKGDRDGDEYLINLIDSPGHVDFSSEVTAALR 384
ADEAERGITIKSTGISLFY+M+ ESL++YKG+RDG+EYLINLIDSPGHVDFSSEVTAALR
Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 385 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 564
ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR
Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 180
Query: 565 VIENANVIMATYEDVLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKM 744
VIENANVIMATYED LLGDVQVYPEKGTVAFSAGLHGWAFTL++FAKMYASKFGVDE KM
Sbjct: 181 VIENANVIMATYEDTLLGDVQVYPEKGTVAFSAGLHGWAFTLSSFAKMYASKFGVDEFKM 240
Query: 745 MERLWGENFFDPATKKWTSKNTGTATCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLKK 924
MERLWGENFFDPATKKWT+KNTG+ATCKRGFVQFCYEPIKQII TCMNDQKDKLWPML+K
Sbjct: 241 MERLWGENFFDPATKKWTNKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQK 300
Query: 925 LGVTMKNDEKDLMGKALMKRVMQTWLPASRALLEMMIFHLPSPSKAQRYRVENLYEGPLD 1104
LGV MK DEK+LMGKALMKRVMQTWLPAS ALLEMMI+HLPSPSKAQRYRVENLYEGPLD
Sbjct: 301 LGVVMKADEKELMGKALMKRVMQTWLPASNALLEMMIYHLPSPSKAQRYRVENLYEGPLD 360
Query: 1105 DIYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFAGRVATGMKVRIMGPNFVPGQ 1284
D+YA AIRNCDP+GPLMLYVSKMIPASDKGRFFAFGRVF+GRVATGMKVRIMGPN+VPGQ
Sbjct: 361 DVYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVATGMKVRIMGPNYVPGQ 420
Query: 1285 KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVDACPIRA 1464
KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVA+VGLDQFITKNATLTNEKE DACPIRA
Sbjct: 421 KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNATLTNEKESDACPIRA 480
Query: 1465 MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEI 1644
MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEI
Sbjct: 481 MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEI 540
Query: 1645 CLKDLQDDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE 1824
CLKDLQ+DFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE
Sbjct: 541 CLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE 600
Query: 1825 AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI 2004
AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI
Sbjct: 601 AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI 660
Query: 2005 KDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQVIPTARRVIYASQLT 2184
KDSVVAGFQWASKEGALAEENMRGICFEVCDVVLH DAIHRGGGQVIPTARRVIYASQLT
Sbjct: 661 KDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLT 720
Query: 2185 AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPVIESFG 2364
AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQR GTPLYNIKAYLPVIESFG
Sbjct: 721 AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFG 780
Query: 2365 FSSTLRAATSGQAFPQCVFDHWDIMASDPLDPGTQSATLVTEIRKRKGLKEQMTPLSDFE 2544
FSS LRAATSGQAFPQCVFDHWD+M SDPL+ G+Q++TLV +IRKRKGLKEQMTPLSDFE
Sbjct: 781 FSSQLRAATSGQAFPQCVFDHWDMMTSDPLEAGSQASTLVQDIRKRKGLKEQMTPLSDFE 840
Query: 2545 DKL 2553
DKL
Sbjct: 841 DKL 843
9632.m00189|protein Elongation factor G, domain IV, putative
Length = 843
Score = 1631 bits (4178), Expect = 0.0
Identities = 798/843 (94%), Positives = 824/843 (97%)
Frame = +1
Query: 25 MVKFTAEELRGIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 204
MVKFT EELR IMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR
Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 205 ADEAERGITIKSTGISLFYQMTPESLEMYKGDRDGDEYLINLIDSPGHVDFSSEVTAALR 384
ADEAERGITIKSTGISLFY+M+ ESL++YKG+RDG+EYLINLIDSPGHVDFSSEVTAALR
Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 385 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 564
ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR
Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 180
Query: 565 VIENANVIMATYEDVLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKM 744
VIENANVIMATYED LLGDVQVYPEKGTVAFSAGLHGWAFTL++FAKMYASKFGVDE+KM
Sbjct: 181 VIENANVIMATYEDTLLGDVQVYPEKGTVAFSAGLHGWAFTLSSFAKMYASKFGVDESKM 240
Query: 745 MERLWGENFFDPATKKWTSKNTGTATCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLKK 924
MERLWGENFFDPATKKWT+K+TG+ATCKRGFVQFCYEPIKQII TCMNDQKDKLWPML+K
Sbjct: 241 MERLWGENFFDPATKKWTNKSTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQK 300
Query: 925 LGVTMKNDEKDLMGKALMKRVMQTWLPASRALLEMMIFHLPSPSKAQRYRVENLYEGPLD 1104
LGV MK DEKDLMGKALMKRVMQTWLPAS ALLEMMI+HLPSPSKAQ+YRVENLYEGPLD
Sbjct: 301 LGVVMKADEKDLMGKALMKRVMQTWLPASNALLEMMIYHLPSPSKAQKYRVENLYEGPLD 360
Query: 1105 DIYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFAGRVATGMKVRIMGPNFVPGQ 1284
D+YA AIRNCDP+GPLMLYVSKMIPASDKGRFFAFGRVF+GRVATGMKVRIMGPN+VPGQ
Sbjct: 361 DVYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVATGMKVRIMGPNYVPGQ 420
Query: 1285 KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVDACPIRA 1464
KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVA+VGLDQFITKNATLTNEKE DACPIRA
Sbjct: 421 KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNATLTNEKEADACPIRA 480
Query: 1465 MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEI 1644
MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEI
Sbjct: 481 MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEI 540
Query: 1645 CLKDLQDDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE 1824
CLKDLQ+DFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE
Sbjct: 541 CLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE 600
Query: 1825 AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI 2004
AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI
Sbjct: 601 AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI 660
Query: 2005 KDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQVIPTARRVIYASQLT 2184
KDSVVAGFQWASKEGALAEENMRGICFEVCDVVLH DAIHRGGGQVIPTARRVIYASQLT
Sbjct: 661 KDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLT 720
Query: 2185 AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPVIESFG 2364
AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQR GTPLYNIKAYLPVIESFG
Sbjct: 721 AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFG 780
Query: 2365 FSSTLRAATSGQAFPQCVFDHWDIMASDPLDPGTQSATLVTEIRKRKGLKEQMTPLSDFE 2544
FSS LRAATSGQAFPQCVFDHWD+M SDPL+ +Q+ LV +IRKRKGLKEQMTPLSDFE
Sbjct: 781 FSSQLRAATSGQAFPQCVFDHWDMMTSDPLEVSSQANQLVLDIRKRKGLKEQMTPLSDFE 840
Query: 2545 DKL 2553
DKL
Sbjct: 841 DKL 843
9629.m05250|protein Elongation factor G, domain IV, putative
Length = 826
Score = 1530 bits (3918), Expect = 0.0
Identities = 746/819 (91%), Positives = 791/819 (96%), Gaps = 2/819 (0%)
Frame = +1
Query: 25 MVKFTAEELRGIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 204
MVKFT EE+R IMDKK+NIRNMSV+AHVDHGKSTLTDSLVAAAGIIAQ+VAGDVRMTD+R
Sbjct: 1 MVKFTVEEMRRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSR 60
Query: 205 ADEAERGITIKSTGISLFYQMTPESLEMYKGDRDGDEYLINLIDSPGHVDFSSEVTAALR 384
+DEAERGITIKSTGISL+Y+M+ ESL+ YKGDRDG+EYLINLIDSPGHVDFSSEVTAALR
Sbjct: 61 SDEAERGITIKSTGISLYYEMSDESLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 385 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 564
ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQV GEEAYQTFSR
Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVGGEEAYQTFSR 180
Query: 565 VIENANVIMATYEDVLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKM 744
VIENANVIMATYED LLGDVQVYPEKGTVAFSAGLHGWAFTL+NFAKMYASKFGVDE+KM
Sbjct: 181 VIENANVIMATYEDALLGDVQVYPEKGTVAFSAGLHGWAFTLSNFAKMYASKFGVDESKM 240
Query: 745 MERLWGENFFDPATKKWTSKNTGTATCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLKK 924
MERLWGEN+FDP TKKWT K+TG+ TCKRGF+QFCYEPI+QII TCMNDQKDKL PML+K
Sbjct: 241 MERLWGENYFDPTTKKWTIKHTGSDTCKRGFIQFCYEPIRQIINTCMNDQKDKLLPMLQK 300
Query: 925 LGVTMKNDEKDLMGKALMKRVMQTWLPASRALLEMMIFHLPSPSKAQRYRVENLYEGPLD 1104
LGVTMK DL GKALMKRVMQTWLPAS ALLEMMI+HLPSP+KAQRYRVENLYEGPLD
Sbjct: 301 LGVTMK----DLTGKALMKRVMQTWLPASNALLEMMIYHLPSPAKAQRYRVENLYEGPLD 356
Query: 1105 DIYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFAGRVATGMKVRIMGPNFVPGQ 1284
DIYA+AIRNCDP+GPLMLYVSKMIPASDKGRF+AFGRVF+GRVATGMKVRIMGPN+ PGQ
Sbjct: 357 DIYASAIRNCDPEGPLMLYVSKMIPASDKGRFYAFGRVFSGRVATGMKVRIMGPNYAPGQ 416
Query: 1285 KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVDACPIRA 1464
KKDLYVK+VQRTVIWMGKKQESVE VPCGNTVA+VGLDQFITKNATLTNEKEVDACPI+A
Sbjct: 417 KKDLYVKNVQRTVIWMGKKQESVEGVPCGNTVAMVGLDQFITKNATLTNEKEVDACPIKA 476
Query: 1465 MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEI 1644
MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCT+EESGEHIIAGAGELHLEI
Sbjct: 477 MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTVEESGEHIIAGAGELHLEI 536
Query: 1645 CLKDLQDDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE 1824
CLKDLQ+DFMGGAEI VSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARP+EEGL E
Sbjct: 537 CLKDLQEDFMGGAEITVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPMEEGLPE 596
Query: 1825 AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI 2004
AID+GRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPN+VVDMCKGVQYLNEI
Sbjct: 597 AIDEGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNIVVDMCKGVQYLNEI 656
Query: 2005 KDSVVAGFQWASKEGALAEENM--RGICFEVCDVVLHTDAIHRGGGQVIPTARRVIYASQ 2178
KDSVVAGFQWASKEGALAEENM RGICFEVCDV+LH+DAIHRGGGQ+IPTARRVIYA+Q
Sbjct: 657 KDSVVAGFQWASKEGALAEENMRGRGICFEVCDVILHSDAIHRGGGQIIPTARRVIYAAQ 716
Query: 2179 LTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPVIES 2358
LTAKPRLLEPVYLVEIQAPENALGGIY VLNQKRGHVFEEMQR GTPLYNIKAYLPVIES
Sbjct: 717 LTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIES 776
Query: 2359 FGFSSTLRAATSGQAFPQCVFDHWDIMASDPLDPGTQSATL 2481
FGF+STLRAATSGQAFP VFDHW++++ DPL+PGT+ TL
Sbjct: 777 FGFTSTLRAATSGQAFPLFVFDHWEMLSVDPLEPGTRQLTL 817
9629.m05092|protein Elongation factor G, domain IV, putative
Length = 853
Score = 1375 bits (3520), Expect = 0.0
Identities = 662/843 (78%), Positives = 752/843 (88%), Gaps = 10/843 (1%)
Frame = +1
Query: 25 MVKFTAEELRGIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 204
MV+FTAEELR MDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQ+VAGDVRMTDTR
Sbjct: 1 MVRFTAEELRASMDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTR 60
Query: 205 ADEAERGITIKSTGISLFYQMTPESLEMYKGDRDGDEYLINLIDSPGHVDFSSEVTAALR 384
ADEAERGITIKSTGISL+Y+MT +L ++G RDG+ YLINLIDSPGH+DFSSEVTAALR
Sbjct: 61 ADEAERGITIKSTGISLYYEMTDAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALR 120
Query: 385 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 564
ITDGALVVVDCIEGVCVQTETVLRQ+L ERI+PVLTVNKMDRCFLELQ GEEAYQ FSR
Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQSLAERIKPVLTVNKMDRCFLELQQSGEEAYQAFSR 180
Query: 565 VIENANVIMATYEDVLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKM 744
VIE+ NV MA YED LGD V PEKGTVAFSAGLHGWAFTL+NFAKMY +KF VDEAKM
Sbjct: 181 VIESVNVTMAPYEDKNLGDCMVAPEKGTVAFSAGLHGWAFTLSNFAKMYKAKFKVDEAKM 240
Query: 745 MERLWGENFFDPATKKWTSK--NTGTATCKRGFVQFCYEPIKQIIATCMNDQKDKLWPML 918
MERLWGEN+FD TKKWT+ +T + TC+RGFVQFCYEPI++II+ CMND K+ LW ML
Sbjct: 241 MERLWGENYFDHTTKKWTTTAPSTSSKTCQRGFVQFCYEPIRRIISACMNDDKENLWDML 300
Query: 919 KKLGVTMKNDEKDLMGKALMKRVMQTWLPASRALLEMMIFHLPSPSKAQRYRVENLYEGP 1098
KL +T+K +EK+L GK LMKRVMQ WLPAS ALLEM++FHLPSP+KAQ+YRV+ LY+GP
Sbjct: 301 TKLKITLKAEEKELTGKKLMKRVMQAWLPASDALLEMIVFHLPSPAKAQQYRVDTLYDGP 360
Query: 1099 LDDIYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFAGRVATGMKVRIMGPNFVP 1278
LDD YA AIRNCDP GPLM+YVSKMIPASDKGRFFAFGRVF+G VATG KVRIMGPNFVP
Sbjct: 361 LDDPYATAIRNCDPKGPLMVYVSKMIPASDKGRFFAFGRVFSGTVATGNKVRIMGPNFVP 420
Query: 1279 GQKKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVDACPI 1458
G+KKDLYVK+VQRTVIWMGKKQESV+DVPCGNTVA+VGLDQFITKNATLT+EK VDA PI
Sbjct: 421 GEKKDLYVKTVQRTVIWMGKKQESVDDVPCGNTVAMVGLDQFITKNATLTDEKAVDAHPI 480
Query: 1459 RAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHL 1638
+AMKFSVSPVVR +V CK AS+LPKLVEGLKRLAKSDP+V+CTIEESGEH+IAG G+LHL
Sbjct: 481 KAMKFSVSPVVRKSVACKNASELPKLVEGLKRLAKSDPLVVCTIEESGEHVIAGVGQLHL 540
Query: 1639 EICLKDLQDDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPL---- 1806
EIC+KDLQ+DFMGGAEIIV PP++++RETV + SCRTVMSKSPNKHNRLYMEARPL
Sbjct: 541 EICIKDLQEDFMGGAEIIVGPPIITYRETVTKNSCRTVMSKSPNKHNRLYMEARPLDKED 600
Query: 1807 ----EEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDM 1974
E L +AIDD RIGP+DD K R KILSEEFGWDKDLAKKIW FGPET GPN++VDM
Sbjct: 601 LQQDEPSLCKAIDDERIGPKDDIKERGKILSEEFGWDKDLAKKIWAFGPETKGPNLLVDM 660
Query: 1975 CKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQVIPTA 2154
CKGVQYL+EIKDSVVAGFQWASKEGALAEENMRG+CFE+CDV LH+D+IHRGGGQ+IPTA
Sbjct: 661 CKGVQYLSEIKDSVVAGFQWASKEGALAEENMRGVCFELCDVTLHSDSIHRGGGQLIPTA 720
Query: 2155 RRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRQGTPLYNIK 2334
RR +YA+QLTA PRL+EP+Y V+IQ P+ A+G +YGVLN + G + EE +R GTPL N++
Sbjct: 721 RRAMYAAQLTASPRLMEPMYQVDIQVPKTAVGNVYGVLNSRNGELVEESERTGTPLSNLR 780
Query: 2335 AYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDIMASDPLDPGTQSATLVTEIRKRKGLK 2514
YLPV +SF F+ LRA TSGQAFPQC+F HW M SDP G+++A ++T+IRKRKGLK
Sbjct: 781 FYLPVAKSFDFTEKLRAETSGQAFPQCIFHHWQTMRSDPFQEGSEAAKVITDIRKRKGLK 840
Query: 2515 EQMTPLSDFEDKL 2553
+ +TPLSD+EDKL
Sbjct: 841 DIITPLSDYEDKL 853
9634.m03897|protein Elongation factor G, domain IV, putative
Length = 997
Score = 615 bits (1570), Expect = e-176
Identities = 327/839 (38%), Positives = 507/839 (59%), Gaps = 22/839 (2%)
Frame = +1
Query: 37 TAEELRGIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIA---QEVAGDVRMTDTRA 207
T + L G+ +RN++++ H+ HGK+ D LV + E VR TDTR
Sbjct: 134 TTDFLLGLAANPALVRNVALVGHLQHGKTVFMDMLVEQTHEVDTFDSEGERHVRFTDTRV 193
Query: 208 DEAERGITIKSTGISLFYQMTPESLEMYKGDRDGDEYLINLIDSPGHVDFSSEVTAALRI 387
DE ER ++IK+ +SL + +G YL N++D+PGHV+FS E+TAALRI
Sbjct: 194 DEQERRVSIKAVPMSLVLE-----------GGNGKSYLCNIMDTPGHVNFSDEMTAALRI 242
Query: 388 TDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSRV 567
DGA++VVD EGV V TE +R A ER+ V+ +NK+DR EL++ +AY
Sbjct: 243 ADGAVLVVDAAEGVMVNTERAIRHATQERLPIVVVINKVDRLITELKLPPNDAYFKLRHT 302
Query: 568 IENANVIMATYEDVLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGV--DEAK 741
+E N ++++ + G V P G V F++G GW+FTL +FA +Y G+ D K
Sbjct: 303 LEAINDLISSCSTTVGGTQLVDPAAGNVCFASGSAGWSFTLQSFAHLYLKIHGIQFDHEK 362
Query: 742 MMERLWGENFFDPATKKWTSKNTGTATCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLK 921
RLWG+ ++ P T+ + K R FV+F EP+ +I + + + K K+ L
Sbjct: 363 FASRLWGDLYYHPDTRTFKKKPPKEGA-NRSFVEFVLEPLYKIYSQVVGESKGKVEATLS 421
Query: 922 KLGVTMKNDEKDLMGKALMKRVMQTWLPASRALLEMMIFHLPSPSKAQRYRVENLYEGPL 1101
+LGVT+ N L + L++ ++ S +M++ H+PS A ++E++Y GP
Sbjct: 422 ELGVTLSNAAYKLNVRPLLRLACRSIFGTSTGFTDMLVKHIPSVKDAAPRKIEHIYTGPQ 481
Query: 1102 DDIYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFAGRVATGMKVRIMGPNFVPG 1281
D +A++ CDP PLM+ V+K+ P SD F AFGRV++G + TG VR++G + P
Sbjct: 482 DSTIVDAMKKCDPHAPLMVNVTKLYPKSDCSVFDAFGRVYSGTIQTGQTVRVLGEGYSPD 541
Query: 1282 QKKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEK-EVDACPI 1458
++D+ VK V + ++ + + + P G+ V + G+D I K AT+ K + D
Sbjct: 542 DEEDMTVKEVTKLWVYQARYRVPISKAPAGSWVLIEGVDASIMKTATICPMKMDEDVYIF 601
Query: 1459 RAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHL 1638
R ++F+ PVV++A + S+LPK+VEGL++++KS P+ + +EESGEH I G GEL+L
Sbjct: 602 RPLRFNTLPVVKIAAEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYL 661
Query: 1639 EICLKDLQDDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGL 1818
+ +KDL++ + E+ V+ PVV+F ETV++ S +++PNK N++ M A PLE+GL
Sbjct: 662 DSIMKDLRELY-SEVEVKVADPVVTFCETVVDTSSMKCFAETPNKRNKITMVAEPLEKGL 720
Query: 1819 AEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQY-- 1992
AE I++G + K + + + WD A+ IW FGPE GPN+++D V+
Sbjct: 721 AEDIENGLVSLDSRQKEITDFFRQRYQWDVLAARSIWAFGPEKQGPNILLDDTLSVEVDK 780
Query: 1993 --LNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQVIPTARRVI 2166
LN +KDS+V GFQW ++EG L +E +R + F++ + + + +HRGGGQ+IPTARRV+
Sbjct: 781 NLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKILNANIAPEPLHRGGGQIIPTARRVV 840
Query: 2167 YASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLP 2346
Y++ L A PRL+EPVY +EIQ P + + IY VL+++RGHV ++ + GTP+Y +KA+LP
Sbjct: 841 YSAFLMANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVTADVPKPGTPIYVVKAFLP 900
Query: 2347 VIESFGFSSTLRAATSGQAFPQCVFDHWDIMASDPLDPGTQSATL------------VTE 2490
VIESFGF + LR T GQAF VFDHW I+ DPLD L + +
Sbjct: 901 VIESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKNIVLRPLEPAPIQHLAREFMVK 960
Query: 2491 IRKRKGLKEQMTPLSDFEDKL 2553
R+RKG+ E ++ F++ +
Sbjct: 961 TRRRKGMSEDVSINKFFDEAM 981
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 177243275
Number of Sequences: 59712
Number of extensions: 4902729
Number of successful extensions: 15690
Number of sequences better than 1.0e-10: 26
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 15638
Number of HSP's gapped (non-prelim): 29
length of query: 957
length of database: 26,991,925
effective HSP length: 54
effective length of query: 902
effective length of database: 23,767,477
effective search space: 21438264254
effective search space used: 21438264254
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 163 (67.9 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG694 Members:47 3pri:Y 1e-166
AAD26156.1 granule-bound starch synthase precursor [Triticum
aestivum]
(2309 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9634.m00333|protein granule-bound glycogen [starch] synth... 1025 0.0
9635.m02174|protein hypothetical protein 763 0.0
9634.m01225|protein soluble starch synthase II-3, putative 329 1e-89
9630.m05011|protein soluble starch synthase II-2 320 5e-87
9634.m00585|protein glycosyl transferase, group 1 family ... 317 6e-86
9638.m02586|protein Similar to soluble starch synthase II-1 307 5e-83
9629.m05069|protein glycosyl transferase, group 1 family ... 202 2e-51
9629.m05068|protein glycosyl transferase, group 1 family ... 201 4e-51
9633.m04286|protein glycosyl transferase, group 1 family ... 190 8e-48
9629.m05070|protein glycosyl transferase, group 1 family ... 187 5e-47
9632.m05172|protein starch synthase III, putative 168 3e-41
9633.m04287|protein glycosyl transferase, group 1 family ... 164 6e-40
9636.m00878|protein Microtubule associated protein 1A/1B,... 137 9e-32
9629.m05120|protein retrotransposon protein, putative, Ty... 69 4e-11
9634.m00333|protein granule-bound glycogen [starch] synthase,
chloroplast precursor(ec 2.4.1.11)
Length = 617
Score = 1025 bits (2622), Expect = 0.0
Identities = 503/603 (83%), Positives = 544/603 (89%), Gaps = 15/603 (2%)
Frame = +1
Query: 226 MAALATSQLATSGTVLGVTDR-----FRRPGFQGLRPRNPA--DAALGMRTIGASAAPKQ 384
M+AL TSQLATS T G+ DR R GFQGL+PR+PA DA T A A PKQ
Sbjct: 1 MSALTTSQLATSATGFGIADRSAPSSLLRHGFQGLKPRSPAGGDATSLSVTTSARATPKQ 60
Query: 385 SRKAHRGSRRCLSVVVRATGSGMNLVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVM 564
R RGSRR SVVV ATG+GMN+VFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVM
Sbjct: 61 QRSVQRGSRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVM 120
Query: 565 VVSPRYDQYKDAWDTSVISEIKVADEYERVRFFHCYKRGVDRVFIDHPWFLEKVRGKTKE 744
V+SPRYDQYKDAWDTSV++EIKVAD YERVRFFHCYKRGVDRVFIDHP FLEKV GKT E
Sbjct: 121 VISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGE 180
Query: 745 KIYGPDAGTDYEDNQQRFSLLCQAALEAPRILNLNNNPYFSGPYGEDVVFVCNDWHTGLL 924
KIYGPD G DY+DNQ RFSLLCQAALEAPRILNLNNNPYF G YGEDVVFVCNDWHTG L
Sbjct: 181 KIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPL 240
Query: 925 ACYLKSNYQSNGIYRTAKVAFCIHNISYQGRFSFDDFAQLNLPDRFKSSFDFIDGYDKPV 1104
A YLK+NYQ NGIYR AKVAFCIHNISYQGRF+F+D+ +LNL +RF+SSFDFIDGYD PV
Sbjct: 241 ASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPV 300
Query: 1105 EGRKINWMKAGILQADKVLTVSPYYAEELISGEARGCELDNIMRLTGITGIVNGMDVSEW 1284
EGRKINWMKAGIL+AD+VLTVSPYYAEELISG ARGCELDNIMRLTGITGIVNGMDVSEW
Sbjct: 301 EGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEW 360
Query: 1285 DPTKDKFLAVNYDITT--------ALEAKALNKEALQAEVGLPVDRKVPLVAFIGRLEEQ 1440
DP+KDK++ YD TT A+EAKALNKEALQAE GLPVDRK+PL+AFIGRLEEQ
Sbjct: 361 DPSKDKYITAKYDATTARMSDKFQAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQ 420
Query: 1441 KGPDVMIAAIPEILKEEDVQIILLGTGKKKFEKLLKSMEEKFPGKVRAVVRFNAPLAHQM 1620
KGPDVM AAIPE++ +EDVQI+LLGTGKKKFEKLLKSMEEK+PGKVRAVV+FNAPLAH +
Sbjct: 421 KGPDVMAAAIPELM-QEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLI 479
Query: 1621 MAGADLLAVTSRFEPCGLIQLQGMRYGTPCVCASTGGLVDTIVEGKTGFHMGRLSVDCNV 1800
MAGAD+LAV SRFEPCGLIQLQGMRYGTPC CASTGGLVDT++EGKTGFHMGRLSVDC V
Sbjct: 480 MAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKV 539
Query: 1801 VEPADVKKVATTLKRAVKVVGTPAYQEMVKNCMIQDLSWKGPAKNWEDVLLELGVEGSEP 1980
VEP+DVKKVA TLKRA+KVVGTPAY+EMV+NCM QDLSWKGPAKNWE+VLL LGV GS P
Sbjct: 540 VEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSAP 599
Query: 1981 GIVGEEIAPLAMENVAAP 2034
GI G+EIAPLA ENVAAP
Sbjct: 600 GIEGDEIAPLAKENVAAP 617
9635.m02174|protein hypothetical protein
Length = 610
Score = 763 bits (1948), Expect = 0.0
Identities = 362/530 (68%), Positives = 425/530 (79%), Gaps = 7/530 (1%)
Frame = +1
Query: 445 SGMNLVFVGAEMAPWSKTGGLGDVLGGLPPAMAAN------GHRVMVVSPRYDQYKDAWD 606
+GM ++F+ E PW KTGGLGDVLGGLPPA+A N GHRVM + PRYDQYKDAWD
Sbjct: 75 AGMTIIFIATECHPWCKTGGLGDVLGGLPPALAVNILCHAMGHRVMTIVPRYDQYKDAWD 134
Query: 607 TSVISEIKVADEYERVRFFHCYKRGVDRVFIDHPWFLEKVRGKTKEKIYGPDAGTDYEDN 786
T+V+ E+ + D E VRFFHCYKRGVDRVF+DHP FLEKV GKT K+YGP G DY DN
Sbjct: 135 TNVLVEVNIGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGPKLYGPTTGDDYRDN 194
Query: 787 QQRFSLLCQAALEAPRILNLNNNPYFSGPYGEDVVFVCNDWHTGLLACYLKSNYQSNGIY 966
Q RF LLC AALEAPR+LNLNN+ YFSGPYGE+VVFV NDWHTG+L CYLKS YQ+ G+Y
Sbjct: 195 QLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPCYLKSIYQAKGMY 254
Query: 967 RTAKVAFCIHNISYQGRFSFDDFAQLNLPDRFKSSFDFIDGYDKPVEGRKINWMKAGILQ 1146
AKVAFCIHNI+YQGRF+ +DF LNLPD F SFDFIDG+ KPV GRKINWMKAGI +
Sbjct: 255 VNAKVAFCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPVVGRKINWMKAGITE 314
Query: 1147 ADKVLTVSPYYAEELISGEARGCELDNIMRLTGI-TGIVNGMDVSEWDPTKDKFLAVNYD 1323
D V+TVSP+Y +EL SG +G ELD I+R + TGIVNGMDV EW+P D++++V YD
Sbjct: 315 CDLVMTVSPHYVKELASGPDKGVELDGILRTKPLETGIVNGMDVYEWNPATDQYISVKYD 374
Query: 1324 ITTALEAKALNKEALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEILKEEDVQI 1503
TT EA+ALNKE LQAEVGLPVD +PL+ F+GRLEEQKG D++IAAIPE + E +VQI
Sbjct: 375 ATTVTEARALNKEMLQAEVGLPVDSSIPLIVFVGRLEEQKGSDILIAAIPEFV-EGNVQI 433
Query: 1504 ILLGTGKKKFEKLLKSMEEKFPGKVRAVVRFNAPLAHQMMAGADLLAVTSRFEPCGLIQL 1683
I+LGTGKKK E+ L +E K+P R + +FN PLAH M AGAD + V SRFEPCGLIQL
Sbjct: 434 IVLGTGKKKMEEELILLEVKYPNNARGIAKFNVPLAHMMFAGADFIIVPSRFEPCGLIQL 493
Query: 1684 QGMRYGTPCVCASTGGLVDTIVEGKTGFHMGRLSVDCNVVEPADVKKVATTLKRAVKVVG 1863
QGMRYG +C+STGGLVDT+ EG TGFHMG +V+C V+P DV VA+T+KRA+K
Sbjct: 494 QGMRYGVVPICSSTGGLVDTVKEGVTGFHMGLFNVECETVDPVDVTAVASTVKRALKQYN 553
Query: 1864 TPAYQEMVKNCMIQDLSWKGPAKNWEDVLLELGVEGSEPGIVGEEIAPLAMENVAAP 2034
TPA+QEMV+NCM QDLSWKGPAK WE+VLL LGVEGS+PGI GEE+APLA ENVA P
Sbjct: 554 TPAFQEMVQNCMAQDLSWKGPAKKWEEVLLGLGVEGSQPGIEGEELAPLAKENVATP 610
9634.m01225|protein soluble starch synthase II-3, putative
Length = 810
Score = 329 bits (834), Expect = 1e-89
Identities = 205/502 (40%), Positives = 286/502 (56%), Gaps = 8/502 (1%)
Frame = +1
Query: 451 MNLVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVVSPRYDQYKDAWDTSVISEIK 630
MN++ V AE +PW KTGGLGDV G LP A+A GHRVMVV PRY Y +A D + K
Sbjct: 319 MNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQDVGIRKYYK 378
Query: 631 VADEYERVRFFHCYKRGVDRVFIDHPWFLEKVRGKTKEKIYGPDAGTDYEDNQQRFSLLC 810
A + V++FH + GVD VFID P F + ++ IYG + ++ +R L C
Sbjct: 379 AAGQDLEVKYFHAFIDGVDFVFIDAPLFRHR-----QDDIYGGNR----QEIMKRMILFC 429
Query: 811 QAALEAPRILNLNNNPYFSGPYGEDVVFVCNDWHTGLLACYLKSNYQSNGIYRTAKVAFC 990
+AA+E P + PY G ++VF+ NDWHT LL YLK+ Y+ NG+ + +
Sbjct: 430 KAAVEVPWHVPCGGVPYGDG----NLVFLANDWHTALLPVYLKAYYRDNGMMQYTRSVLV 485
Query: 991 IHNISYQGRFSFDDFAQLNLPDRFKSSFDFIDGYDKPVEGRKINWMKAGILQADKVLTVS 1170
IHNI+YQGR D+F + LP+ + F D PV G N AG+ AD+V+TVS
Sbjct: 486 IHNIAYQGRGPVDEFPYMELPEHYLDHFKLYD----PVGGEHANIFGAGLKMADRVVTVS 541
Query: 1171 PYYAEELISGEARGCELDNIMRLTG--ITGIVNGMDVSEWDPTKDKFLA----VNYDITT 1332
P Y EL + E G L +I+R + GIVNG+D EW+P D L NY + +
Sbjct: 542 PGYLWELKTTEG-GWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVAS 600
Query: 1333 ALEAKALNKEALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEILKEEDVQIILL 1512
+K K ALQ E+GL V VPL+ FIGRL+ QKG D++ A+P I +DVQ++LL
Sbjct: 601 LDSSKPRCKAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWI-AGQDVQLVLL 659
Query: 1513 GTGKKKFEKLLKSMEEKFPGKVRAVVRFNAPLAHQMMAGADLLAVTSRFEPCGLIQLQGM 1692
G+G++ E +L+ E + KVR V F+ +AH++ AGAD+L + SRFEPCGL QL M
Sbjct: 660 GSGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAM 719
Query: 1693 RYGTPCVCASTGGLVDTIVEGKTGFHMGRLSVDCNVVEPADVKKVATTLKRAVKVVG--T 1866
YGT V + GGL DT + F L + EP K+ L ++
Sbjct: 720 AYGTVPVVHAVGGLRDT-MSAFDPFEDTGLGWTFDRAEP---HKLIEALGHCLETYRKYK 775
Query: 1867 PAYQEMVKNCMIQDLSWKGPAKNWEDVLLE 1956
+++ + M QDLSW A+ +E+VL++
Sbjct: 776 ESWRGLQVRGMSQDLSWDHAAELYEEVLVK 805
9630.m05011|protein soluble starch synthase II-2
Length = 694
Score = 320 bits (812), Expect = 5e-87
Identities = 199/502 (39%), Positives = 283/502 (55%), Gaps = 12/502 (2%)
Frame = +1
Query: 451 MNLVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVVSPRYDQYKDAWDTSVISEIK 630
MN++ V +E +P+ KTGGLGDV+G LP A+A GHRVMVV PRY +Y +A D V +
Sbjct: 203 MNVIVVASECSPFCKTGGLGDVVGALPKALARRGHRVMVVIPRYGEYAEAKDLGVRKRYR 262
Query: 631 VADEYERVRFFHCYKRGVDRVFIDHPWFLEKVRGKTKEKIYGPDAGTDYEDNQQRFSLLC 810
VA + V +FH + GVD VF++ P F + IYG + D +R L C
Sbjct: 263 VAGQDSEVSYFHAFIDGVDFVFLEAPPFRHR-----HNDIYGGER----FDVLKRMILFC 313
Query: 811 QAALEAPRILNLNNNPYFSGPYGEDVVFVCNDWHTGLLACYLKSNYQSNGIYRTAKVAFC 990
+AA+E P + Y G ++VF+ NDWHT LL YLK+ Y+ NG+ + +
Sbjct: 314 KAAVEVPWFAPCGGSIYGDG----NLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSVLV 369
Query: 991 IHNISYQGRFSFDDFAQLNLPDRFKSSFDFIDGYDKPVEGRKINWMKAGILQADKVLTVS 1170
IHNI++QGR DDFA ++LP+ + F D PV G N AG+ AD+ +TVS
Sbjct: 370 IHNIAHQGRGPVDDFATMDLPEHYIDHFRLYD----PVGGEHSNVFAAGLKMADRAVTVS 425
Query: 1171 PYYAEELISGEARGCELDNIMRLTG--ITGIVNGMDVSEWDPTKDKFLA----VNYDITT 1332
Y E+ + + G L I+ + GIVNG+D++EW+P D+ L NY T
Sbjct: 426 HGYLWEIKTMDG-GWGLHEIINHNDWKLQGIVNGIDMAEWNPEVDEHLQSDGYANYTFET 484
Query: 1333 ALEAKALNKEALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEILKEEDVQIILL 1512
K KEALQ ++GL V VPL+ FIGRL+ QKG D++ A+P I +DVQ+++L
Sbjct: 485 LDTGKKQCKEALQRQLGLQVRDDVPLIGFIGRLDHQKGVDIIGDAMPWI-AGQDVQVVML 543
Query: 1513 GTGKKKFEKLLKSMEEKFPGKVRAVVRFNAPLAHQMMAGADLLAVTSRFEPCGLIQLQGM 1692
GTG+ E++L+ E + KVR V F+ LAH++ AGAD+L + SRFEPCGL QL M
Sbjct: 544 GTGRPDLEEMLRRFESEHNDKVRGWVGFSVQLAHRITAGADVLLMPSRFEPCGLNQLYAM 603
Query: 1693 RYGTPCVCASTGGLVDTIVE----GKTGFHMGRLSVDCNVVEPADVKKVATTLKRAVKVV 1860
YGT V + GGL DT+ TG + A+ ++ L +
Sbjct: 604 AYGTVPVVHAVGGLRDTVAPFDPFADTGLGW--------TFDRAEANRMIDALGHCLNTY 655
Query: 1861 GT--PAYQEMVKNCMIQDLSWKGPAKNWEDVLLE 1956
+++ + M QDLSW A+ +EDVL++
Sbjct: 656 RNYKESWRGLQARGMAQDLSWDHAAELYEDVLVK 689
9634.m00585|protein glycosyl transferase, group 1 family protein,
putative
Length = 641
Score = 317 bits (803), Expect = 6e-86
Identities = 188/498 (37%), Positives = 288/498 (57%), Gaps = 17/498 (3%)
Frame = +1
Query: 454 NLVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVVSPRY------DQYKDAWDTSV 615
++VFV E +P++K+GGLGDV G LP A+A GHRVMVV PRY + +A+ T
Sbjct: 134 SVVFVTGEASPYAKSGGLGDVCGSLPIALALRGHRVMVVMPRYMNGALNKNFANAFYTEK 193
Query: 616 ISEIKVADEYERVRFFHCYKRGVDRVFIDHPWFLEKVRGKTKEKIYGPDAGTDYEDNQQR 795
+I V FFH Y+ VD VF+DHP + +YG + G + DNQ R
Sbjct: 194 HIKIPCFGGEHEVTFFHEYRDSVDWVFVDHPSY------HRPGNLYGDNFGA-FGDNQFR 246
Query: 796 FSLLCQAALEAPRILNLNNNPYFSGPYGEDVVFVCNDWHTGLLACYLKSNYQSNGIYRTA 975
++LLC AA EAP IL L Y YG+ +FV NDWH L+ L + Y+ G+YR A
Sbjct: 247 YTLLCYAACEAPLILELGG--YI---YGQKCMFVVNDWHASLVPVLLAAKYRPYGVYRDA 301
Query: 976 KVAFCIHNISYQGRFSFDDFAQLNLPDRFKSSFDFI-------DGYDKPVEGRKINWMKA 1134
+ IHN+++QG + L LP + + +++ DK G +N++K
Sbjct: 302 RSVLVIHNLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDK---GEAVNFLKG 358
Query: 1135 GILQADKVLTVSPYYAEELISGEARGCELDNIM--RLTGITGIVNGMDVSEWDPTKDKFL 1308
++ AD+++TVS Y+ E+ + E G L+ ++ R + + GIVNG+D+++W+P+ DKFL
Sbjct: 359 AVVTADRIVTVSQGYSWEVTTAEG-GQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFL 417
Query: 1309 AVNYDITTALEAKALNKEALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEILKE 1488
+Y + L KA K LQ E+GLP+ VPL+ FIGRL+ QKG D++ AIP+++++
Sbjct: 418 PYHYSVDD-LSGKAKCKAELQKELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRD 476
Query: 1489 EDVQIILLGTGKKKFEKLLKSMEEKFPGKVRAVVRFNAPLAHQMMAGADLLAVTSRFEPC 1668
++Q ++LG+G FE ++S E + K R V F+ P++H++ AG D+L + SRFEPC
Sbjct: 477 -NIQFVMLGSGDPGFEGWMRSTESGYRDKFRGWVGFSVPVSHRITAGCDILLMPSRFEPC 535
Query: 1669 GLIQLQGMRYGTPCVCASTGGLVDTIVEGKTGFHMGRLSVDCNVVEPADVKKVATTLKRA 1848
GL QL M+YGT V TGGL DT+ G P ++K+ L+ A
Sbjct: 536 GLNQLYAMQYGTVPVVHGTGGLRDTVENFNPFAEKGEQGTGW-AFSPLTIEKMLWALRMA 594
Query: 1849 VKVV--GTPAYQEMVKNCMIQDLSWKGPAKNWEDV 1947
+ +++ ++K M D +W A +E +
Sbjct: 595 ISTYREHKSSWEGLMKRGMSSDFTWDHAASQYEQI 629
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171624854
Number of Sequences: 59712
Number of extensions: 6124345
Number of successful extensions: 97889
Number of sequences better than 1.0e-10: 28
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 97749
Number of HSP's gapped (non-prelim): 66
length of query: 769
length of database: 26,991,925
effective HSP length: 53
effective length of query: 716
effective length of database: 23,827,189
effective search space: 17060267324
effective search space used: 17060267324
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 162 (67.5 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG698 Members:364 3pri:Y 5e-54
T05950 lipid transfer protein 7a2b - barley emb|CAA65680.1|
lipid transfer protein 7a2b [Hordeum vulgare subsp. vulga
(982 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9640.m00136|protein lipid-transfer protein - maize 155 8e-38
9639.m00148|protein lipid-transfer protein - maize 155 1e-37
9640.m00135|protein lipid-transfer protein - maize 150 3e-36
9639.m00146|protein lipid-transfer protein - maize 148 2e-35
9640.m00132|protein lipid transfer protein 133 4e-31
9639.m00141|protein lipid transfer protein 133 4e-31
9639.m02120|protein phospholipid transfer protein homolog... 116 4e-26
9639.m00143|protein nonspecific lipid-transfer protein 2 ... 115 1e-25
9640.m00133|protein nonspecific lipid-transfer protein 2 ... 114 3e-25
9639.m00145|protein Protease inhibitor/seed storage/LTP f... 114 3e-25
9640.m00131|protein Similar to nonspecific lipid-transfer... 113 4e-25
9640.m00134|protein phospholipid transfer protein homolog... 111 1e-24
9639.m00139|protein Similar to nonspecific lipid-transfer... 111 2e-24
9636.m00287|protein nonspecific lipid-transfer protein a ... 101 2e-21
9633.m03731|protein Protease inhibitor/seed storage/LTP f... 90 5e-18
9630.m02307|protein Similar to nonspecific lipid-transfer... 83 7e-16
9629.m01162|protein Protease inhibitor/seed storage/LTP f... 83 9e-16
9629.m05973|protein Protease inhibitor/seed storage/LTP f... 82 2e-15
9629.m05974|protein Protease inhibitor/seed storage/LTP f... 82 2e-15
9634.m03292|protein Protease inhibitor/seed storage/LTP f... 82 2e-15
9640.m00136|protein lipid-transfer protein - maize
Length = 118
Score = 155 bits (389), Expect = 8e-38
Identities = 77/121 (63%), Positives = 97/121 (79%)
Frame = +3
Query: 48 MARLNSKAVAAAVVLAAVVLMMAGREASAALSCGQVDSKLAPCVAYVTGRASAISKECCS 227
MA LN K V A +V+A VV A ASAA++CGQV S +APC++YVTGR S +++ CC+
Sbjct: 1 MAALNGKVVVAVMVVAMVV---AAPGASAAITCGQVGSAIAPCISYVTGR-SGLTQGCCN 56
Query: 228 GVQGLNGLARSSPDRQTACRCLKSLATSIKAINMGKVSGVPGKCGVSVPFPISMSTDCNK 407
GV+GLN AR++ DRQ ACRCLKSLA SIK++N+G V+GVPGKCGV+V FPIS+STDCNK
Sbjct: 57 GVKGLNNAARTTADRQAACRCLKSLAGSIKSLNLGTVAGVPGKCGVNVGFPISLSTDCNK 116
Query: 408 V 410
V
Sbjct: 117 V 117
9639.m00148|protein lipid-transfer protein - maize
Length = 118
Score = 155 bits (387), Expect = 1e-37
Identities = 76/121 (62%), Positives = 97/121 (79%)
Frame = +3
Query: 48 MARLNSKAVAAAVVLAAVVLMMAGREASAALSCGQVDSKLAPCVAYVTGRASAISKECCS 227
MA +N K V A +V+A VV A ASAA++CGQV S +APC++YVTGR S +++ CC+
Sbjct: 1 MAAVNCKVVVAVIVVAMVV---AAPGASAAITCGQVGSAIAPCISYVTGR-SGLTQGCCN 56
Query: 228 GVQGLNGLARSSPDRQTACRCLKSLATSIKAINMGKVSGVPGKCGVSVPFPISMSTDCNK 407
GV+GLN AR++ DRQ ACRCLKSLA SIK++N+G V+GVPGKCGV+V FPIS+STDCNK
Sbjct: 57 GVKGLNNAARTTADRQAACRCLKSLAGSIKSLNLGTVAGVPGKCGVNVGFPISLSTDCNK 116
Query: 408 V 410
V
Sbjct: 117 V 117
9640.m00135|protein lipid-transfer protein - maize
Length = 118
Score = 150 bits (376), Expect = 3e-36
Identities = 73/121 (60%), Positives = 97/121 (79%)
Frame = +3
Query: 48 MARLNSKAVAAAVVLAAVVLMMAGREASAALSCGQVDSKLAPCVAYVTGRASAISKECCS 227
MA LN KAVAA +V+A VV A ASAA++CGQV S +APC++YVTGR +++ CC+
Sbjct: 1 MAALNFKAVAAVMVMAMVV---AAPGASAAITCGQVGSAIAPCISYVTGRGG-LTQGCCN 56
Query: 228 GVQGLNGLARSSPDRQTACRCLKSLATSIKAINMGKVSGVPGKCGVSVPFPISMSTDCNK 407
GV+GLN AR++ DRQ ACRCLK+LA +IK++N+G +G+PGKCGV+V FPIS+STDC+K
Sbjct: 57 GVKGLNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGIPGKCGVNVGFPISLSTDCSK 116
Query: 408 V 410
V
Sbjct: 117 V 117
9639.m00146|protein lipid-transfer protein - maize
Length = 118
Score = 148 bits (369), Expect = 2e-35
Identities = 71/121 (58%), Positives = 95/121 (77%)
Frame = +3
Query: 48 MARLNSKAVAAAVVLAAVVLMMAGREASAALSCGQVDSKLAPCVAYVTGRASAISKECCS 227
MA LN K V A +V+A VV A ASAA++CGQV S +APC++YVTGR +++ CC+
Sbjct: 1 MAALNGKVVVAVMVVAMVV---AAPGASAAITCGQVGSAIAPCISYVTGRGG-LTQGCCN 56
Query: 228 GVQGLNGLARSSPDRQTACRCLKSLATSIKAINMGKVSGVPGKCGVSVPFPISMSTDCNK 407
GV+GLN AR++ DRQ ACRCLK+LA +IK++N+G +G+PGKCGV+V FPIS+STDC+K
Sbjct: 57 GVKGLNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGIPGKCGVNVGFPISLSTDCSK 116
Query: 408 V 410
V
Sbjct: 117 V 117
9640.m00132|protein lipid transfer protein
Length = 121
Score = 133 bits (332), Expect = 4e-31
Identities = 60/116 (51%), Positives = 82/116 (69%)
Frame = +3
Query: 66 KAVAAAVVLAAVVLMMAGREASAALSCGQVDSKLAPCVAYVTGRASAISKECCSGVQGLN 245
+ +A ++A V + ASAA+SCG V S +APC++YV GR S+ S CCSGV+ LN
Sbjct: 6 RTMALVALVAVVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLN 65
Query: 246 GLARSSPDRQTACRCLKSLATSIKAINMGKVSGVPGKCGVSVPFPISMSTDCNKVH 413
G A SS DR+TAC CLK++A+S + +NMG + +P KCGVSV FPIS S DC+K++
Sbjct: 66 GKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKIN 121
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63023512
Number of Sequences: 59712
Number of extensions: 1893344
Number of successful extensions: 36271
Number of sequences better than 1.0e-10: 42
Number of HSP's better than 0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 36237
Number of HSP's gapped (non-prelim): 22
length of query: 327
length of database: 26,991,925
effective HSP length: 51
effective length of query: 275
effective length of database: 23,946,613
effective search space: 6585318575
effective search space used: 6585318575
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG820 Members:372 3pri:Y 1e-100
S21386 chlorophyll a/b-binding protein CP29 precursor -
barley emb|CAA44777.1| Precursor of CP29, core chlorophyll a/
(1437 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9639.m01284|protein chlorophyll a/b-binding protein CP26 ... 524 e-148
9639.m01283|protein chlorophyll a/b-binding protein CP26 ... 365 e-100
9637.m01516|protein chlorophyll a/b-binding protein I pre... 223 7e-58
9629.m05067|protein Chlorophyll A-B binding protein, puta... 223 7e-58
9629.m03990|protein Chlorophyll A-B binding protein, puta... 221 3e-57
9631.m03807|protein chlorophyll a/b binding protein 214 3e-55
9635.m03724|protein chlorophyll a-b binding protein of lh... 208 3e-53
9637.m00977|protein Chlorophyll A-B binding protein, puta... 182 1e-45
9634.m02114|protein chlorophyll a/b-binding protein precu... 142 2e-33
9630.m05194|protein light-harvesting complex protein [imp... 141 2e-33
9635.m03882|protein LHCI-680, photosystem I antenna prote... 137 5e-32
9635.m03689|protein probable chlorophyll a/b-binding prot... 132 1e-30
9637.m02343|protein AY086461 PSI type II chlorophyll a/b-... 127 5e-29
9636.m03389|protein chlorophyll a/b-binding protein presu... 126 8e-29
9630.m00958|protein chlorophyll a/b-binding protein type ... 123 7e-28
9630.m00957|protein chlorophyll a/b-binding protein type ... 81 4e-17
9633.m03752|protein retrotransposon protein, putative, un... 71 6e-12
9629.m00408|protein expressed protein 71 6e-12
9629.m05120|protein retrotransposon protein, putative, Ty... 70 8e-12
9639.m01284|protein chlorophyll a/b-binding protein CP26 precursor
- maize
Length = 283
Score = 524 bits (1334), Expect = e-148
Identities = 255/286 (89%), Positives = 267/286 (93%)
Frame = +2
Query: 134 MAALAPTKMLGTRLDFAGSSRYATAAPTAGAQKIVSLFDRFNKKPAPKPKPAPVATSSAG 313
MAALAP+KMLGTRL+FAGSSRYATAAPT GAQKIVSLF +KKPAPKPKPA V +SS
Sbjct: 1 MAALAPSKMLGTRLNFAGSSRYATAAPTTGAQKIVSLF---SKKPAPKPKPAAVTSSSPD 57
Query: 314 IDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFE 493
I DELAKWYGPDRRI+LP GLLDRSEVP+YLNGEVPGDYGYDPFGL KKPEDF+KYQA+E
Sbjct: 58 IGDELAKWYGPDRRIFLPEGLLDRSEVPDYLNGEVPGDYGYDPFGLSKKPEDFSKYQAYE 117
Query: 494 LIHARWAMLGAAGFIIPEALNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLILA 673
LIHARWAMLGAAGFIIPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLI+A
Sbjct: 118 LIHARWAMLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLIVA 177
Query: 674 VVAEVVLVGGAEYYRITNGLEFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMF 853
V AEVVLVGGAEYYRI NGL+ +DKLHPGGPFDPLGLA+DPDQAALLKVKEIKNGRLAMF
Sbjct: 178 VAAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMF 237
Query: 854 SMLGFFIQAYVTGEGPFENLCAHLSDPFGNNLLTVISGAAERVPSL 991
SMLGFFIQAYVTGEGP ENL HLSDPFGNNLLTVISGAAER PSL
Sbjct: 238 SMLGFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISGAAERTPSL 283
9639.m01283|protein chlorophyll a/b-binding protein CP26 precursor
- maize
Length = 245
Score = 365 bits (926), Expect = e-100
Identities = 177/200 (88%), Positives = 186/200 (92%)
Frame = +2
Query: 134 MAALAPTKMLGTRLDFAGSSRYATAAPTAGAQKIVSLFDRFNKKPAPKPKPAPVATSSAG 313
MAALAP+KMLGTRL+FAGSSRYATAAPT GAQKIVSLF +KKPAPKPKPA V +SS
Sbjct: 1 MAALAPSKMLGTRLNFAGSSRYATAAPTTGAQKIVSLF---SKKPAPKPKPAAVTSSSPD 57
Query: 314 IDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFE 493
I DELAKWYGPDRRI+LP GLLDRSEVP+YLNGEVPGDYGYDPFGL KKPEDF+KYQA+E
Sbjct: 58 IGDELAKWYGPDRRIFLPEGLLDRSEVPDYLNGEVPGDYGYDPFGLSKKPEDFSKYQAYE 117
Query: 494 LIHARWAMLGAAGFIIPEALNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLILA 673
LIHARWAMLGAAGFIIPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLI+A
Sbjct: 118 LIHARWAMLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLIVA 177
Query: 674 VVAEVVLVGGAEYYRITNGL 733
V AEVVLVGGAEYYRI NGL
Sbjct: 178 VAAEVVLVGGAEYYRIINGL 197
9637.m01516|protein chlorophyll a/b-binding protein I precursor -
rice
Length = 265
Score = 223 bits (562), Expect = 7e-58
Identities = 129/229 (56%), Positives = 152/229 (66%), Gaps = 5/229 (2%)
Frame = +2
Query: 260 KKPAPKPKPAPVATSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYD 439
+K A KPKPA +S+G + WYG DR +YL G L E P YL GE PGDYG+D
Sbjct: 33 RKTAAKPKPA----ASSG-----SPWYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWD 80
Query: 440 PFGLGKKPEDFAKYQAFELIHARWAMLGAAGFIIPEALNKFGANCGPEAVWFKTGALLLD 619
GL PE FAK + E+IH+RWAMLGA G + PE L + G G EAVWFK G+ +
Sbjct: 81 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFS 139
Query: 620 GNTLNYFGNSIPINL--ILAVVA-EVVLVGGAEYYRITNGL--EFDDKLHPGGPFDPLGL 784
L+Y GN I+ ILA+ A +VVL+G E YRI G E D L+PGG FDPLGL
Sbjct: 140 EGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGL 199
Query: 785 ATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPFENLCAHLSDPFGNN 946
A DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP ENL HL+DP NN
Sbjct: 200 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
9629.m05067|protein Chlorophyll A-B binding protein, putative
Length = 265
Score = 223 bits (562), Expect = 7e-58
Identities = 134/253 (52%), Positives = 159/253 (61%), Gaps = 11/253 (4%)
Frame = +2
Query: 188 SSRYATAAPTAGAQKIVSLFDRFN------KKPAPKPKPAPVATSSAGIDDELAKWYGPD 349
+S A ++P A A K V+ F +K A KPKPA + S WYG D
Sbjct: 3 ASTMALSSPAALAGKAVANAKVFGEGRVTMRKSAAKPKPAAASGSP---------WYGAD 53
Query: 350 RRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAMLGAA 529
R +YL G L E P YL GE PGDYG+D GL PE FAK + E+IH RWAMLGA
Sbjct: 54 RVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 110
Query: 530 GFIIPEALNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINL--ILAVVA-EVVLVG 700
G + PE L + G G EAVWFK G+ + L+Y GN I+ ILA+ +VVL+G
Sbjct: 111 GCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWGCQVVLMG 169
Query: 701 GAEYYRITNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFI 874
E YR+ G E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+
Sbjct: 170 AVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 229
Query: 875 QAYVTGEGPFENLCAHLSDPFGNN 946
QA VTG+GP ENL HL+DP NN
Sbjct: 230 QAIVTGKGPLENLADHLADPVNNN 253
9629.m03990|protein Chlorophyll A-B binding protein, putative
Length = 261
Score = 221 bits (557), Expect = 3e-57
Identities = 127/229 (55%), Positives = 148/229 (64%), Gaps = 5/229 (2%)
Frame = +2
Query: 260 KKPAPKPKPAPVATSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYD 439
+K A KPKPA + WYG DR +YL G L E P YL GE PGDYG+D
Sbjct: 30 RKSAAKPKPAASGSP----------WYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWD 76
Query: 440 PFGLGKKPEDFAKYQAFELIHARWAMLGAAGFIIPEALNKFGANCGPEAVWFKTGALLLD 619
GL PE FAK + E+IH+RWAMLGA G + PE L + G G EAVWFK G+ +
Sbjct: 77 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFS 135
Query: 620 GNTLNYFGNSIPINL--ILAVVA-EVVLVGGAEYYRITNGL--EFDDKLHPGGPFDPLGL 784
L+Y GN I+ ILA+ A +VVL+G E YRI G E D L+PGG FDPLGL
Sbjct: 136 EGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL 195
Query: 785 ATDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPFENLCAHLSDPFGNN 946
A DP+ A LKVKEIKNGRLAMFSM GFF+QA VTG+GP ENL HL+DP NN
Sbjct: 196 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 249
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97042309
Number of Sequences: 59712
Number of extensions: 3169824
Number of successful extensions: 37400
Number of sequences better than 1.0e-10: 38
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 37233
Number of HSP's gapped (non-prelim): 41
length of query: 479
length of database: 26,991,925
effective HSP length: 52
effective length of query: 426
effective length of database: 23,886,901
effective search space: 10175819826
effective search space used: 10175819826
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG823 Members:175 3pri:Y 1e-139
P31923 Sucrose synthase 2 (Sucrose-UDP glucosyltransferase
2) pir||S32451 sucrose synthase (EC 2.4.1.13) Ss2 - barley
(2846 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9635.m04256|protein Sucrose synthase, putative 1569 0.0
9631.m02804|protein sucrose-UDP glucosyltransferase 2 1530 0.0
9634.m00901|protein sucrose synthase (EC 2.4.1.13) 1 - rice 1368 0.0
9634.m00900|protein sucrose synthase (EC 2.4.1.13) 1 - rice 1368 0.0
9634.m00899|protein sucrose synthase (EC 2.4.1.13) 1 - rice 1368 0.0
9634.m00898|protein sucrose synthase (EC 2.4.1.13) 1 - rice 1368 0.0
9631.m02215|protein sucrose synthase 3 1174 0.0
9631.m02214|protein sucrose synthase 3 979 0.0
9630.m05839|protein Sucrose synthase, putative 878 0.0
9632.m02280|protein Sucrose synthase, putative 864 0.0
9632.m01596|protein Sucrose synthase, putative 864 0.0
9636.m02033|protein sucrose-phosphate synthase 1 (ec 2.4.... 151 5e-36
9636.m02032|protein sucrose-phosphate synthase 1 (ec 2.4.... 151 5e-36
9630.m00828|protein sucrose-phosphate synthase 146 1e-34
9630.m00829|protein sucrose-phosphate synthase 146 1e-34
9629.m06860|protein glycosyl transferase, group 1 family ... 143 2e-33
9634.m04216|protein sucrose-phosphate synthase 141 4e-33
9634.m00988|protein hypothetical protein 78 8e-14
9635.m04256|protein Sucrose synthase, putative
Length = 816
Score = 1569 bits (4018), Expect = 0.0
Identities = 754/816 (92%), Positives = 788/816 (96%)
Frame = +2
Query: 152 MGETAGERALSRVHSVRERIGDSLSAHTNELVAVFSRLVNQGKGMLQPHQITAEYNAAIP 331
MGET GERAL+R+HS+RERIGDSLSAHTNELVAVFSRLVNQGKGMLQPHQI AEYNAAIP
Sbjct: 1 MGETTGERALTRLHSMRERIGDSLSAHTNELVAVFSRLVNQGKGMLQPHQIIAEYNAAIP 60
Query: 332 EAEREKLKNTPFEDLLRGAQEAIVIPPWVALAIRPRPGVWEYVRVNVSELGVEELSVPEY 511
E EREKLK++ ED+LRGAQEAIVIPPW+ALAIRPRPGVWEY+R+NVS+LGVEELSVPEY
Sbjct: 61 EGEREKLKDSALEDVLRGAQEAIVIPPWIALAIRPRPGVWEYLRINVSQLGVEELSVPEY 120
Query: 512 LQFKEQLANGSTDNNFVLELDFGPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESM 691
LQFKEQL +GST NNFVLELDF PFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESM
Sbjct: 121 LQFKEQLVDGSTQNNFVLELDFEPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESM 180
Query: 692 YPLLNFLRAHNYKGMTMMLNDRIRSLGTLQGALRKAETHLSGLPADTPYSEFHHRFQELG 871
YPLLNFLRAHNYKGMTMMLNDRIRSL LQGALRKAE HL+G+ ADTPYSEFHHRFQELG
Sbjct: 181 YPLLNFLRAHNYKGMTMMLNDRIRSLDALQGALRKAEKHLAGITADTPYSEFHHRFQELG 240
Query: 872 LEKGWGDCAQRASETIHLLLDLLEAPDPSSLEKFLGTIPMVFNVVILSPHGYFAQANVLG 1051
LEKGWGDCAQR ETIHLLLDLLEAP+PS+LEKFLGTIPMVFNVVILSPHGYFAQANVLG
Sbjct: 241 LEKGWGDCAQRVRETIHLLLDLLEAPEPSALEKFLGTIPMVFNVVILSPHGYFAQANVLG 300
Query: 1052 YPDTGGQVVYILDQVRAMENEMLLRIKQQGLDITPKILIVTRMLPDAHGTTCGQRLEKVL 1231
YPDTGGQVVYILDQVRAMENEMLLRIKQQGL+ITP+ILIVTR+LPDAHGTTCGQRLEKVL
Sbjct: 301 YPDTGGQVVYILDQVRAMENEMLLRIKQQGLNITPRILIVTRLLPDAHGTTCGQRLEKVL 360
Query: 1232 GTEHTHILRVPFKTEDGIVRKWISRFEVWPYLEAYTDDVAHEIAGELQANPDLIIGNYSD 1411
GTEHTHILRVPF+TE+G VRKWISRFEVWPYLE YTDDVAHEI+GELQA PDLIIGNYSD
Sbjct: 361 GTEHTHILRVPFRTENGTVRKWISRFEVWPYLETYTDDVAHEISGELQATPDLIIGNYSD 420
Query: 1412 GNLVACLLAHKLGVTHCTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTADLIAMNHADF 1591
GNLVACLLAHKLGVTHCTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTADLIAMNHADF
Sbjct: 421 GNLVACLLAHKLGVTHCTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTADLIAMNHADF 480
Query: 1592 IITSTFQEIAGNKDTVGQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYT 1771
IITSTFQEIAGNK+TVGQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADMSIYFP+T
Sbjct: 481 IITSTFQEIAGNKETVGQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPFT 540
Query: 1772 EQQKRLTSLHTEIEELLFSDVENAEHKFVLKDKKKPIIFSMARLDRVKNMTGLVEMYGRN 1951
E QKRLTSLH EIEELLFSDVEN EHKFVLKDKKKPIIFSMARLD VKN+TGLVE+YGRN
Sbjct: 541 ESQKRLTSLHLEIEELLFSDVENTEHKFVLKDKKKPIIFSMARLDHVKNLTGLVELYGRN 600
Query: 1952 PRLQELVNLVVVCGDHGKVSKDKEEQAEFKKMFDLIEKYNLSGHIRWISAQMNRVRNGEL 2131
PRLQELVNLVVVCGDHGK SKDKEEQAEFKKMF+LIE+YNL+GHIRWISAQMNRVRNGEL
Sbjct: 601 PRLQELVNLVVVCGDHGKESKDKEEQAEFKKMFNLIEQYNLNGHIRWISAQMNRVRNGEL 660
Query: 2132 YRYICDMKGAFVQPAFYEAFGLTVIEAMTCGLPTFATAYGGPAEIIVNGVSGYHIDPYQN 2311
YRYICDM+GAFVQPA YEAFGLTVIEAMTCGLPTFATAYGGPAEIIV+GVSGYHIDPYQN
Sbjct: 661 YRYICDMRGAFVQPALYEAFGLTVIEAMTCGLPTFATAYGGPAEIIVHGVSGYHIDPYQN 720
Query: 2312 DKASALLVDFFGKCQEDPSHWNKISQGGLQRIEEKYTWKLYSERLMTLSGVYGFWKYVSN 2491
DKASALLV+FF KCQEDP+HW KISQGGLQRIEEKYTWKLYSERLMTLSGVYGFWKYV+N
Sbjct: 721 DKASALLVEFFEKCQEDPNHWIKISQGGLQRIEEKYTWKLYSERLMTLSGVYGFWKYVTN 780
Query: 2492 LDRRETRRYLEMLYALKYRKMAATVPLAVEGETSGK 2599
LDRRETRRYLEMLYALKYRKMA TVPLA+EGE S K
Sbjct: 781 LDRRETRRYLEMLYALKYRKMATTVPLAIEGEASTK 816
9631.m02804|protein sucrose-UDP glucosyltransferase 2
Length = 816
Score = 1530 bits (3918), Expect = 0.0
Identities = 738/816 (90%), Positives = 775/816 (94%)
Frame = +2
Query: 152 MGETAGERALSRVHSVRERIGDSLSAHTNELVAVFSRLVNQGKGMLQPHQITAEYNAAIP 331
MGE AG+R LSR+HSVRERIGDSLSAH NELVAVF+RLVN GKGMLQ HQI AEYN AI
Sbjct: 1 MGEAAGDRVLSRLHSVRERIGDSLSAHPNELVAVFTRLVNLGKGMLQAHQIIAEYNNAIS 60
Query: 332 EAEREKLKNTPFEDLLRGAQEAIVIPPWVALAIRPRPGVWEYVRVNVSELGVEELSVPEY 511
EA+REKLK+ FED+LR AQE IVI PWVALAIRPRPGVWEYVRVNVSEL VE L+VPEY
Sbjct: 61 EADREKLKDGAFEDVLRSAQEGIVISPWVALAIRPRPGVWEYVRVNVSELAVELLTVPEY 120
Query: 512 LQFKEQLANGSTDNNFVLELDFGPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESM 691
LQFKEQL T+NNFVLELDF PFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESM
Sbjct: 121 LQFKEQLVEEGTNNNFVLELDFEPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESM 180
Query: 692 YPLLNFLRAHNYKGMTMMLNDRIRSLGTLQGALRKAETHLSGLPADTPYSEFHHRFQELG 871
YPLLNFLRAHNYKGMTMMLNDRIRSL LQGALRKAE HLSGL ADTPYSEFHHRFQELG
Sbjct: 181 YPLLNFLRAHNYKGMTMMLNDRIRSLSALQGALRKAEEHLSGLSADTPYSEFHHRFQELG 240
Query: 872 LEKGWGDCAQRASETIHLLLDLLEAPDPSSLEKFLGTIPMVFNVVILSPHGYFAQANVLG 1051
LEKGWGDCA+R+ ETIHLLLDLLEAPDPS+LEKFLGTIPMVFNVVI+SPHGYFAQANVLG
Sbjct: 241 LEKGWGDCAKRSQETIHLLLDLLEAPDPSTLEKFLGTIPMVFNVVIMSPHGYFAQANVLG 300
Query: 1052 YPDTGGQVVYILDQVRAMENEMLLRIKQQGLDITPKILIVTRMLPDAHGTTCGQRLEKVL 1231
YPDTGGQVVYILDQVRAMENEMLLRIKQQGL+ITP+ILIVTR+LPDA GTTCGQRLEKVL
Sbjct: 301 YPDTGGQVVYILDQVRAMENEMLLRIKQQGLNITPRILIVTRLLPDATGTTCGQRLEKVL 360
Query: 1232 GTEHTHILRVPFKTEDGIVRKWISRFEVWPYLEAYTDDVAHEIAGELQANPDLIIGNYSD 1411
GTEHTHILRVPF+TE+GIVRKWISRFEVWPYLE +TDDVAHEIAGELQANPDLIIGNYSD
Sbjct: 361 GTEHTHILRVPFRTENGIVRKWISRFEVWPYLETFTDDVAHEIAGELQANPDLIIGNYSD 420
Query: 1412 GNLVACLLAHKLGVTHCTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTADLIAMNHADF 1591
GNLVACLLAHK+GVTHCTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFT DLIAMNHADF
Sbjct: 421 GNLVACLLAHKMGVTHCTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTTDLIAMNHADF 480
Query: 1592 IITSTFQEIAGNKDTVGQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYT 1771
IITSTFQEIAGNKDTVGQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPY+
Sbjct: 481 IITSTFQEIAGNKDTVGQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYS 540
Query: 1772 EQQKRLTSLHTEIEELLFSDVENAEHKFVLKDKKKPIIFSMARLDRVKNMTGLVEMYGRN 1951
E +KRLTSLH EIEELL+S+V+N EHKF+LKD+ KPIIFSMARLDRVKN+TGLVE+YGRN
Sbjct: 541 ESRKRLTSLHPEIEELLYSEVDNNEHKFMLKDRNKPIIFSMARLDRVKNLTGLVELYGRN 600
Query: 1952 PRLQELVNLVVVCGDHGKVSKDKEEQAEFKKMFDLIEKYNLSGHIRWISAQMNRVRNGEL 2131
PRLQELVNLVVVCGDHG SKDKEEQAEFKKMFDLIE+YNL+GHIRWISAQMNRVRNGEL
Sbjct: 601 PRLQELVNLVVVCGDHGNPSKDKEEQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGEL 660
Query: 2132 YRYICDMKGAFVQPAFYEAFGLTVIEAMTCGLPTFATAYGGPAEIIVNGVSGYHIDPYQN 2311
YRYICD KGAFVQPAFYEAFGLTV+E+MTCGLPTFATAYGGPAEIIVNGVSG+HIDPYQ
Sbjct: 661 YRYICDTKGAFVQPAFYEAFGLTVVESMTCGLPTFATAYGGPAEIIVNGVSGFHIDPYQG 720
Query: 2312 DKASALLVDFFGKCQEDPSHWNKISQGGLQRIEEKYTWKLYSERLMTLSGVYGFWKYVSN 2491
DKASALLV+FF KCQEDPSHW KISQGGLQRIEEKYTWKLYSERLMTL+GVYGFWKYVSN
Sbjct: 721 DKASALLVEFFEKCQEDPSHWTKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSN 780
Query: 2492 LDRRETRRYLEMLYALKYRKMAATVPLAVEGETSGK 2599
L+RRETRRYLEMLYALKYR MA+TVPLAVEGE S K
Sbjct: 781 LERRETRRYLEMLYALKYRTMASTVPLAVEGEPSNK 816
9634.m00901|protein sucrose synthase (EC 2.4.1.13) 1 - rice
Length = 808
Score = 1368 bits (3502), Expect = 0.0
Identities = 651/807 (80%), Positives = 734/807 (90%)
Frame = +2
Query: 179 LSRVHSVRERIGDSLSAHTNELVAVFSRLVNQGKGMLQPHQITAEYNAAIPEAEREKLKN 358
L+R+HS+RER+G + S+H NEL+A+FSR VNQGKGMLQ HQ+ AE++A I E +K K
Sbjct: 5 LARLHSLRERLGATFSSHPNELIALFSRYVNQGKGMLQRHQLLAEFDALI---EADKEKY 61
Query: 359 TPFEDLLRGAQEAIVIPPWVALAIRPRPGVWEYVRVNVSELGVEELSVPEYLQFKEQLAN 538
PFED+LR AQEAIV+PPWVALAIRPRPGVW+Y+RVNVSEL VEELSV EYL FKEQL +
Sbjct: 62 APFEDILRAAQEAIVLPPWVALAIRPRPGVWDYIRVNVSELAVEELSVSEYLAFKEQLVD 121
Query: 539 GSTDNNFVLELDFGPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESMYPLLNFLRA 718
G T++NFVLELDF PFNASFPRPS+SKSIGNGVQFLNRHLSSKLF DKES+YPLLNFL+A
Sbjct: 122 GHTNSNFVLELDFEPFNASFPRPSMSKSIGNGVQFLNRHLSSKLFQDKESLYPLLNFLKA 181
Query: 719 HNYKGMTMMLNDRIRSLGTLQGALRKAETHLSGLPADTPYSEFHHRFQELGLEKGWGDCA 898
HN+KG TMMLNDRI+SL LQ +LRKAE +L G+P DTPYSEF+HRFQELGLEKGWGDCA
Sbjct: 182 HNHKGTTMMLNDRIQSLRGLQSSLRKAEEYLMGIPQDTPYSEFNHRFQELGLEKGWGDCA 241
Query: 899 QRASETIHLLLDLLEAPDPSSLEKFLGTIPMVFNVVILSPHGYFAQANVLGYPDTGGQVV 1078
+R +TIHLLLDLLEAPDP++LEKFLGTIPM+FNVVILSPHGYFAQ+NVLGYPDTGGQVV
Sbjct: 242 KRVLDTIHLLLDLLEAPDPANLEKFLGTIPMMFNVVILSPHGYFAQSNVLGYPDTGGQVV 301
Query: 1079 YILDQVRAMENEMLLRIKQQGLDITPKILIVTRMLPDAHGTTCGQRLEKVLGTEHTHILR 1258
YILDQVRA+ENEMLLRIKQQGLDITPKILIVTR+LPDA GTTCGQR+EKV+GTEHT ILR
Sbjct: 302 YILDQVRALENEMLLRIKQQGLDITPKILIVTRLLPDAVGTTCGQRVEKVIGTEHTDILR 361
Query: 1259 VPFKTEDGIVRKWISRFEVWPYLEAYTDDVAHEIAGELQANPDLIIGNYSDGNLVACLLA 1438
VPF++E+GI+RKWISRF+VWP+LE YT+DVA+EI E+QA PDLIIGNYSDGNLVA LLA
Sbjct: 362 VPFRSENGILRKWISRFDVWPFLETYTEDVANEIMREMQAKPDLIIGNYSDGNLVATLLA 421
Query: 1439 HKLGVTHCTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTADLIAMNHADFIITSTFQEI 1618
HKLGVT CTIAHALEKTKYPNSD+Y KF+ YHFSCQFTADLIAMNH DFIITSTFQEI
Sbjct: 422 HKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQYHFSCQFTADLIAMNHTDFIITSTFQEI 481
Query: 1619 AGNKDTVGQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEQQKRLTSL 1798
AG+KDTVGQYESH+AFT+PGLYRVVHGIDVFDPKFNIVSPGADMS+YFPYTE KRLT+
Sbjct: 482 AGSKDTVGQYESHIAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSVYFPYTEADKRLTAF 541
Query: 1799 HTEIEELLFSDVENAEHKFVLKDKKKPIIFSMARLDRVKNMTGLVEMYGRNPRLQELVNL 1978
H EIEELL+S+VEN EHKFVLKDK KPIIFSMARLDRVKNMTGLVEMYG+N L++L NL
Sbjct: 542 HPEIEELLYSEVENDEHKFVLKDKNKPIIFSMARLDRVKNMTGLVEMYGKNAHLRDLANL 601
Query: 1979 VVVCGDHGKVSKDKEEQAEFKKMFDLIEKYNLSGHIRWISAQMNRVRNGELYRYICDMKG 2158
V+VCGDHG SKD+EEQAEFKKM+ LI++Y L GHIRWISAQMNRVRNGELYRYICD KG
Sbjct: 602 VIVCGDHGNQSKDREEQAEFKKMYGLIDQYKLKGHIRWISAQMNRVRNGELYRYICDTKG 661
Query: 2159 AFVQPAFYEAFGLTVIEAMTCGLPTFATAYGGPAEIIVNGVSGYHIDPYQNDKASALLVD 2338
FVQPAFYEAFGLTVIEAMTCGLPT AT +GGPAEIIV+GVSG HIDPY +DKA+ +LV+
Sbjct: 662 VFVQPAFYEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVN 721
Query: 2339 FFGKCQEDPSHWNKISQGGLQRIEEKYTWKLYSERLMTLSGVYGFWKYVSNLDRRETRRY 2518
FF KC++D ++W+ ISQGGLQRI EKYTWKLYSERLMTL+GVYGFWKYVSNL+RRETRRY
Sbjct: 722 FFEKCKQDSTYWDNISQGGLQRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRY 781
Query: 2519 LEMLYALKYRKMAATVPLAVEGETSGK 2599
+EM YALKYR +A+ VPLAV+GE++ K
Sbjct: 782 IEMFYALKYRSLASAVPLAVDGESTSK 808
9634.m00900|protein sucrose synthase (EC 2.4.1.13) 1 - rice
Length = 808
Score = 1368 bits (3502), Expect = 0.0
Identities = 651/807 (80%), Positives = 734/807 (90%)
Frame = +2
Query: 179 LSRVHSVRERIGDSLSAHTNELVAVFSRLVNQGKGMLQPHQITAEYNAAIPEAEREKLKN 358
L+R+HS+RER+G + S+H NEL+A+FSR VNQGKGMLQ HQ+ AE++A I E +K K
Sbjct: 5 LARLHSLRERLGATFSSHPNELIALFSRYVNQGKGMLQRHQLLAEFDALI---EADKEKY 61
Query: 359 TPFEDLLRGAQEAIVIPPWVALAIRPRPGVWEYVRVNVSELGVEELSVPEYLQFKEQLAN 538
PFED+LR AQEAIV+PPWVALAIRPRPGVW+Y+RVNVSEL VEELSV EYL FKEQL +
Sbjct: 62 APFEDILRAAQEAIVLPPWVALAIRPRPGVWDYIRVNVSELAVEELSVSEYLAFKEQLVD 121
Query: 539 GSTDNNFVLELDFGPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESMYPLLNFLRA 718
G T++NFVLELDF PFNASFPRPS+SKSIGNGVQFLNRHLSSKLF DKES+YPLLNFL+A
Sbjct: 122 GHTNSNFVLELDFEPFNASFPRPSMSKSIGNGVQFLNRHLSSKLFQDKESLYPLLNFLKA 181
Query: 719 HNYKGMTMMLNDRIRSLGTLQGALRKAETHLSGLPADTPYSEFHHRFQELGLEKGWGDCA 898
HN+KG TMMLNDRI+SL LQ +LRKAE +L G+P DTPYSEF+HRFQELGLEKGWGDCA
Sbjct: 182 HNHKGTTMMLNDRIQSLRGLQSSLRKAEEYLMGIPQDTPYSEFNHRFQELGLEKGWGDCA 241
Query: 899 QRASETIHLLLDLLEAPDPSSLEKFLGTIPMVFNVVILSPHGYFAQANVLGYPDTGGQVV 1078
+R +TIHLLLDLLEAPDP++LEKFLGTIPM+FNVVILSPHGYFAQ+NVLGYPDTGGQVV
Sbjct: 242 KRVLDTIHLLLDLLEAPDPANLEKFLGTIPMMFNVVILSPHGYFAQSNVLGYPDTGGQVV 301
Query: 1079 YILDQVRAMENEMLLRIKQQGLDITPKILIVTRMLPDAHGTTCGQRLEKVLGTEHTHILR 1258
YILDQVRA+ENEMLLRIKQQGLDITPKILIVTR+LPDA GTTCGQR+EKV+GTEHT ILR
Sbjct: 302 YILDQVRALENEMLLRIKQQGLDITPKILIVTRLLPDAVGTTCGQRVEKVIGTEHTDILR 361
Query: 1259 VPFKTEDGIVRKWISRFEVWPYLEAYTDDVAHEIAGELQANPDLIIGNYSDGNLVACLLA 1438
VPF++E+GI+RKWISRF+VWP+LE YT+DVA+EI E+QA PDLIIGNYSDGNLVA LLA
Sbjct: 362 VPFRSENGILRKWISRFDVWPFLETYTEDVANEIMREMQAKPDLIIGNYSDGNLVATLLA 421
Query: 1439 HKLGVTHCTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTADLIAMNHADFIITSTFQEI 1618
HKLGVT CTIAHALEKTKYPNSD+Y KF+ YHFSCQFTADLIAMNH DFIITSTFQEI
Sbjct: 422 HKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQYHFSCQFTADLIAMNHTDFIITSTFQEI 481
Query: 1619 AGNKDTVGQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEQQKRLTSL 1798
AG+KDTVGQYESH+AFT+PGLYRVVHGIDVFDPKFNIVSPGADMS+YFPYTE KRLT+
Sbjct: 482 AGSKDTVGQYESHIAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSVYFPYTEADKRLTAF 541
Query: 1799 HTEIEELLFSDVENAEHKFVLKDKKKPIIFSMARLDRVKNMTGLVEMYGRNPRLQELVNL 1978
H EIEELL+S+VEN EHKFVLKDK KPIIFSMARLDRVKNMTGLVEMYG+N L++L NL
Sbjct: 542 HPEIEELLYSEVENDEHKFVLKDKNKPIIFSMARLDRVKNMTGLVEMYGKNAHLRDLANL 601
Query: 1979 VVVCGDHGKVSKDKEEQAEFKKMFDLIEKYNLSGHIRWISAQMNRVRNGELYRYICDMKG 2158
V+VCGDHG SKD+EEQAEFKKM+ LI++Y L GHIRWISAQMNRVRNGELYRYICD KG
Sbjct: 602 VIVCGDHGNQSKDREEQAEFKKMYGLIDQYKLKGHIRWISAQMNRVRNGELYRYICDTKG 661
Query: 2159 AFVQPAFYEAFGLTVIEAMTCGLPTFATAYGGPAEIIVNGVSGYHIDPYQNDKASALLVD 2338
FVQPAFYEAFGLTVIEAMTCGLPT AT +GGPAEIIV+GVSG HIDPY +DKA+ +LV+
Sbjct: 662 VFVQPAFYEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVN 721
Query: 2339 FFGKCQEDPSHWNKISQGGLQRIEEKYTWKLYSERLMTLSGVYGFWKYVSNLDRRETRRY 2518
FF KC++D ++W+ ISQGGLQRI EKYTWKLYSERLMTL+GVYGFWKYVSNL+RRETRRY
Sbjct: 722 FFEKCKQDSTYWDNISQGGLQRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRY 781
Query: 2519 LEMLYALKYRKMAATVPLAVEGETSGK 2599
+EM YALKYR +A+ VPLAV+GE++ K
Sbjct: 782 IEMFYALKYRSLASAVPLAVDGESTSK 808
9634.m00899|protein sucrose synthase (EC 2.4.1.13) 1 - rice
Length = 808
Score = 1368 bits (3502), Expect = 0.0
Identities = 651/807 (80%), Positives = 734/807 (90%)
Frame = +2
Query: 179 LSRVHSVRERIGDSLSAHTNELVAVFSRLVNQGKGMLQPHQITAEYNAAIPEAEREKLKN 358
L+R+HS+RER+G + S+H NEL+A+FSR VNQGKGMLQ HQ+ AE++A I E +K K
Sbjct: 5 LARLHSLRERLGATFSSHPNELIALFSRYVNQGKGMLQRHQLLAEFDALI---EADKEKY 61
Query: 359 TPFEDLLRGAQEAIVIPPWVALAIRPRPGVWEYVRVNVSELGVEELSVPEYLQFKEQLAN 538
PFED+LR AQEAIV+PPWVALAIRPRPGVW+Y+RVNVSEL VEELSV EYL FKEQL +
Sbjct: 62 APFEDILRAAQEAIVLPPWVALAIRPRPGVWDYIRVNVSELAVEELSVSEYLAFKEQLVD 121
Query: 539 GSTDNNFVLELDFGPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESMYPLLNFLRA 718
G T++NFVLELDF PFNASFPRPS+SKSIGNGVQFLNRHLSSKLF DKES+YPLLNFL+A
Sbjct: 122 GHTNSNFVLELDFEPFNASFPRPSMSKSIGNGVQFLNRHLSSKLFQDKESLYPLLNFLKA 181
Query: 719 HNYKGMTMMLNDRIRSLGTLQGALRKAETHLSGLPADTPYSEFHHRFQELGLEKGWGDCA 898
HN+KG TMMLNDRI+SL LQ +LRKAE +L G+P DTPYSEF+HRFQELGLEKGWGDCA
Sbjct: 182 HNHKGTTMMLNDRIQSLRGLQSSLRKAEEYLMGIPQDTPYSEFNHRFQELGLEKGWGDCA 241
Query: 899 QRASETIHLLLDLLEAPDPSSLEKFLGTIPMVFNVVILSPHGYFAQANVLGYPDTGGQVV 1078
+R +TIHLLLDLLEAPDP++LEKFLGTIPM+FNVVILSPHGYFAQ+NVLGYPDTGGQVV
Sbjct: 242 KRVLDTIHLLLDLLEAPDPANLEKFLGTIPMMFNVVILSPHGYFAQSNVLGYPDTGGQVV 301
Query: 1079 YILDQVRAMENEMLLRIKQQGLDITPKILIVTRMLPDAHGTTCGQRLEKVLGTEHTHILR 1258
YILDQVRA+ENEMLLRIKQQGLDITPKILIVTR+LPDA GTTCGQR+EKV+GTEHT ILR
Sbjct: 302 YILDQVRALENEMLLRIKQQGLDITPKILIVTRLLPDAVGTTCGQRVEKVIGTEHTDILR 361
Query: 1259 VPFKTEDGIVRKWISRFEVWPYLEAYTDDVAHEIAGELQANPDLIIGNYSDGNLVACLLA 1438
VPF++E+GI+RKWISRF+VWP+LE YT+DVA+EI E+QA PDLIIGNYSDGNLVA LLA
Sbjct: 362 VPFRSENGILRKWISRFDVWPFLETYTEDVANEIMREMQAKPDLIIGNYSDGNLVATLLA 421
Query: 1439 HKLGVTHCTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTADLIAMNHADFIITSTFQEI 1618
HKLGVT CTIAHALEKTKYPNSD+Y KF+ YHFSCQFTADLIAMNH DFIITSTFQEI
Sbjct: 422 HKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQYHFSCQFTADLIAMNHTDFIITSTFQEI 481
Query: 1619 AGNKDTVGQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEQQKRLTSL 1798
AG+KDTVGQYESH+AFT+PGLYRVVHGIDVFDPKFNIVSPGADMS+YFPYTE KRLT+
Sbjct: 482 AGSKDTVGQYESHIAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSVYFPYTEADKRLTAF 541
Query: 1799 HTEIEELLFSDVENAEHKFVLKDKKKPIIFSMARLDRVKNMTGLVEMYGRNPRLQELVNL 1978
H EIEELL+S+VEN EHKFVLKDK KPIIFSMARLDRVKNMTGLVEMYG+N L++L NL
Sbjct: 542 HPEIEELLYSEVENDEHKFVLKDKNKPIIFSMARLDRVKNMTGLVEMYGKNAHLRDLANL 601
Query: 1979 VVVCGDHGKVSKDKEEQAEFKKMFDLIEKYNLSGHIRWISAQMNRVRNGELYRYICDMKG 2158
V+VCGDHG SKD+EEQAEFKKM+ LI++Y L GHIRWISAQMNRVRNGELYRYICD KG
Sbjct: 602 VIVCGDHGNQSKDREEQAEFKKMYGLIDQYKLKGHIRWISAQMNRVRNGELYRYICDTKG 661
Query: 2159 AFVQPAFYEAFGLTVIEAMTCGLPTFATAYGGPAEIIVNGVSGYHIDPYQNDKASALLVD 2338
FVQPAFYEAFGLTVIEAMTCGLPT AT +GGPAEIIV+GVSG HIDPY +DKA+ +LV+
Sbjct: 662 VFVQPAFYEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVN 721
Query: 2339 FFGKCQEDPSHWNKISQGGLQRIEEKYTWKLYSERLMTLSGVYGFWKYVSNLDRRETRRY 2518
FF KC++D ++W+ ISQGGLQRI EKYTWKLYSERLMTL+GVYGFWKYVSNL+RRETRRY
Sbjct: 722 FFEKCKQDSTYWDNISQGGLQRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRY 781
Query: 2519 LEMLYALKYRKMAATVPLAVEGETSGK 2599
+EM YALKYR +A+ VPLAV+GE++ K
Sbjct: 782 IEMFYALKYRSLASAVPLAVDGESTSK 808
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182224294
Number of Sequences: 59712
Number of extensions: 5119071
Number of successful extensions: 19385
Number of sequences better than 1.0e-10: 36
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 19317
Number of HSP's gapped (non-prelim): 29
length of query: 948
length of database: 26,991,925
effective HSP length: 54
effective length of query: 894
effective length of database: 23,767,477
effective search space: 21248124438
effective search space used: 21248124438
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 163 (67.9 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG838 Members:576 3pri:Y 3e-94
BAB19812.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Triticum aestivum]
(827 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9640.m01919|protein Ribulose bisphosphate carboxylase, sm... 316 3e-86
9640.m01915|protein Ribulose bisphosphate carboxylase, sm... 312 4e-85
9640.m01725|protein Ribulose bisphosphate carboxylase, sm... 311 1e-84
9640.m01925|protein Ribulose bisphosphate carboxylase, sm... 308 1e-83
9640.m01916|protein Ribulose bisphosphate carboxylase, sm... 241 1e-63
9640.m01926|protein Ribulose bisphosphate carboxylase, sm... 239 6e-63
9640.m01917|protein Ribulose bisphosphate carboxylase, sm... 184 1e-46
9630.m00509|protein Ribulose bisphosphate carboxylase, sm... 177 2e-44
9640.m01919|protein Ribulose bisphosphate carboxylase, small
subunit, putative
Length = 175
Score = 316 bits (802), Expect = 3e-86
Identities = 147/174 (84%), Positives = 164/174 (93%)
Frame = +2
Query: 56 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 235
MAPTVM+S+AT+VAPFQGLKSTAGLPVSR S N+AGLGSVSNGGRI CMQVWPIEGIKKF
Sbjct: 1 MAPTVMASSATSVAPFQGLKSTAGLPVSRRS-NSAGLGSVSNGGRISCMQVWPIEGIKKF 59
Query: 236 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 415
ETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYYDGRYWTMWKLP
Sbjct: 60 ETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLP 119
Query: 416 MFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESG 577
MFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPPGCEESG
Sbjct: 120 MFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESG 173
9640.m01915|protein Ribulose bisphosphate carboxylase, small
subunit
Length = 175
Score = 312 bits (792), Expect = 4e-85
Identities = 144/174 (82%), Positives = 163/174 (92%)
Frame = +2
Query: 56 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 235
MAPTVM+S+AT+VAPFQGLKSTAGLPVSR S N+ G G+VSNGGRI+CMQVWPIEGIKKF
Sbjct: 1 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSTNS-GFGNVSNGGRIKCMQVWPIEGIKKF 59
Query: 236 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 415
ETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYYDGRYWTMWKLP
Sbjct: 60 ETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLP 119
Query: 416 MFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESG 577
MFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPPGCEESG
Sbjct: 120 MFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESG 173
9640.m01725|protein Ribulose bisphosphate carboxylase, small
subunit, putative
Length = 175
Score = 311 bits (788), Expect = 1e-84
Identities = 142/174 (81%), Positives = 163/174 (93%)
Frame = +2
Query: 56 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 235
MAP+VM+S+AT VAPFQGLKSTAG+PV+R SGN++ G+VSNGGRIRCMQVWPIEGIKKF
Sbjct: 1 MAPSVMASSATTVAPFQGLKSTAGMPVARRSGNSS-FGNVSNGGRIRCMQVWPIEGIKKF 59
Query: 236 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 415
ETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYYDGRYWTMWKLP
Sbjct: 60 ETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLP 119
Query: 416 MFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESG 577
MFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPPGCEESG
Sbjct: 120 MFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESG 173
9640.m01925|protein Ribulose bisphosphate carboxylase, small
subunit, putative
Length = 175
Score = 308 bits (780), Expect = 1e-83
Identities = 141/174 (81%), Positives = 163/174 (93%)
Frame = +2
Query: 56 MAPTVMSSAATAVAPFQGLKSTAGLPVSRLSGNAAGLGSVSNGGRIRCMQVWPIEGIKKF 235
MAP+VM+S+AT+VAPFQGLKSTAGLPV+R S +++ G+VSNGGRIRCMQVWPIEGIKKF
Sbjct: 1 MAPSVMASSATSVAPFQGLKSTAGLPVNRRSSSSS-FGNVSNGGRIRCMQVWPIEGIKKF 59
Query: 236 ETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLP 415
ETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYYDGRYWTMWKLP
Sbjct: 60 ETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLP 119
Query: 416 MFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESG 577
MFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPPGCEESG
Sbjct: 120 MFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESG 173
9640.m01916|protein Ribulose bisphosphate carboxylase, small
subunit
Length = 128
Score = 241 bits (608), Expect = 1e-63
Identities = 106/126 (84%), Positives = 119/126 (94%)
Frame = +2
Query: 200 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGY 379
MQVWPIEGIKKFETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGY
Sbjct: 1 MQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGY 60
Query: 380 YDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPP 559
YDGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPP
Sbjct: 61 YDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPP 120
Query: 560 GCEESG 577
GCEESG
Sbjct: 121 GCEESG 126
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52093293
Number of Sequences: 59712
Number of extensions: 1389269
Number of successful extensions: 6980
Number of sequences better than 1.0e-10: 16
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6966
Number of HSP's gapped (non-prelim): 9
length of query: 275
length of database: 26,991,925
effective HSP length: 50
effective length of query: 225
effective length of database: 24,006,325
effective search space: 5401423125
effective search space used: 5401423125
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 157 (65.6 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG841 Members:30 3pri:Y 1e-120
AAB18209.1 chlorophyll a/b-binding protein WCAB precursor
[Triticum aestivum]
(967 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9629.m03990|protein Chlorophyll A-B binding protein, puta... 496 e-140
9629.m05067|protein Chlorophyll A-B binding protein, puta... 495 e-140
9637.m01516|protein chlorophyll a/b-binding protein I pre... 492 e-139
9631.m03807|protein chlorophyll a/b binding protein 414 e-115
9635.m03724|protein chlorophyll a-b binding protein of lh... 341 1e-93
9637.m00977|protein Chlorophyll A-B binding protein, puta... 219 5e-57
9639.m01284|protein chlorophyll a/b-binding protein CP26 ... 214 2e-55
9634.m02114|protein chlorophyll a/b-binding protein precu... 141 2e-33
9635.m03882|protein LHCI-680, photosystem I antenna prote... 139 7e-33
9630.m05194|protein light-harvesting complex protein [imp... 129 8e-30
9630.m00958|protein chlorophyll a/b-binding protein type ... 126 5e-29
9637.m02343|protein AY086461 PSI type II chlorophyll a/b-... 123 6e-28
9639.m01283|protein chlorophyll a/b-binding protein CP26 ... 117 3e-26
9635.m03689|protein probable chlorophyll a/b-binding prot... 116 7e-26
9632.m03624|protein chlorophyll a/b-binding apoprotein CP... 82 2e-15
9630.m00957|protein chlorophyll a/b-binding protein type ... 80 6e-15
9629.m03990|protein Chlorophyll A-B binding protein, putative
Length = 261
Score = 496 bits (1263), Expect = e-140
Identities = 238/266 (89%), Positives = 249/266 (93%)
Frame = +1
Query: 40 MAAATMSISSSTFAGKAVKNVPSLALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLG 219
MAAATM++SS AGKA V FGE R+TMRK+AAK K +SGSPWYGADRVLYLG
Sbjct: 1 MAAATMALSSPALAGKAAAKV-----FGEGRITMRKSAAKPKPAASGSPWYGADRVLYLG 55
Query: 220 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 399
PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 56 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 115
Query: 400 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGG 579
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGG
Sbjct: 116 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGG 175
Query: 580 PLGEIIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 759
PLGE++DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 176 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 235
Query: 760 ENLADHIADPVNNNAWAFATNFVPGK 837
ENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 236 ENLADHLADPVNNNAWAYATNFVPGK 261
9629.m05067|protein Chlorophyll A-B binding protein, putative
Length = 265
Score = 495 bits (1262), Expect = e-140
Identities = 239/266 (89%), Positives = 253/266 (94%), Gaps = 2/266 (0%)
Frame = +1
Query: 40 MAAATMSISS-STFAGKAVKNVPSLALFGEARVTMRKTAAKAKQVS-SGSPWYGADRVLY 213
MAA+TM++SS + AGKAV N +FGE RVTMRK+AAK K + SGSPWYGADRVLY
Sbjct: 1 MAASTMALSSPAALAGKAVANAK---VFGEGRVTMRKSAAKPKPAAASGSPWYGADRVLY 57
Query: 214 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 393
LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 58 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117
Query: 394 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 573
LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIW CQVVLMGAVEGYR+A
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWGCQVVLMGAVEGYRVA 177
Query: 574 GGPLGEIIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 753
GGPLGE++DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 754 PLENLADHIADPVNNNAWAFATNFVPGK 837
PLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAYATNFVPGK 265
9637.m01516|protein chlorophyll a/b-binding protein I precursor -
rice
Length = 265
Score = 492 bits (1253), Expect = e-139
Identities = 240/266 (90%), Positives = 250/266 (93%), Gaps = 1/266 (0%)
Frame = +1
Query: 40 MAAATMSISSSTFAGKAVKNVPSLALFGEARVTMRKTAAKAKQV-SSGSPWYGADRVLYL 216
MAAATM++SS A A S ALFGEAR+TMRKTAAK K SSGSPWYGADRVLYL
Sbjct: 1 MAAATMALSSPVMARAAPST--SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYL 58
Query: 217 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 396
GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 59 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 118
Query: 397 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 576
ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 119 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 178
Query: 577 GPLGEIIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 756
GPLGE++DPLYPGG+FDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 179 GPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 757 LENLADHIADPVNNNAWAFATNFVPGK 837
LENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 239 LENLADHLADPVNNNAWAYATNFVPGK 265
9631.m03807|protein chlorophyll a/b binding protein
Length = 263
Score = 414 bits (1053), Expect = e-115
Identities = 199/264 (75%), Positives = 226/264 (85%), Gaps = 2/264 (0%)
Frame = +1
Query: 46 AATMSISSSTFAGKAVKNVPSLALFGEA--RVTMRKTAAKAKQVSSGSPWYGADRVLYLG 219
AA+ +++F G A + + G++ R+TMR+T A Q S WYG DR YLG
Sbjct: 2 AASALHQTTSFLGTAPRRDELVRRVGDSGGRITMRRTVKSAPQ----SIWYGPDRPKYLG 57
Query: 220 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 399
P S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L+
Sbjct: 58 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILS 117
Query: 400 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGG 579
+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYR+ GG
Sbjct: 118 KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGG 177
Query: 580 PLGEIIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 759
PLGE +D +YPGG+FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+
Sbjct: 178 PLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 237
Query: 760 ENLADHIADPVNNNAWAFATNFVPGK 837
ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 238 ENLFDHVADPVANNAWAYATNFVPGK 263
9635.m03724|protein chlorophyll a-b binding protein of lhcii type
iii, chloroplastprecursor (cab)
Length = 266
Score = 341 bits (865), Expect = 1e-93
Identities = 180/265 (67%), Positives = 199/265 (74%), Gaps = 4/265 (1%)
Frame = +1
Query: 40 MAAATMSISSSTFAGKAVKNVPSLALFGEARVTMRKTAAKA--KQVSSGSPWYGADRVLY 213
MA+ M+ +S A K P L + +R AA A + S WYG DRV Y
Sbjct: 1 MASTIMAPTSRVLAAKT----PFLGHPRPSNAPVRDIAAAATGRITMSKELWYGPDRVKY 56
Query: 214 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 393
LGP S + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+
Sbjct: 57 LGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEV 116
Query: 394 LAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 570
L + V F E VWFKAG+QIFS+GGLDYLGNP+LVHAQSILA+ QVVLMG VEGYRI
Sbjct: 117 LEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYRI 176
Query: 571 AGGPLGEIIDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 747
G P + LYPGG FDPLGLA+DP FAELKVKEIKNGRLAMFSMFGFFVQAIVTG
Sbjct: 177 NGLPGVGDGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 236
Query: 748 KGPLENLADHIADPVNNNAWAFATNFVPG 834
KGPLENL DH+ADPV NNAW +AT F PG
Sbjct: 237 KGPLENLLDHLADPVANNAWVYATKFTPG 265
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69568812
Number of Sequences: 59712
Number of extensions: 2128831
Number of successful extensions: 11083
Number of sequences better than 1.0e-10: 32
Number of HSP's better than 0.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 11030
Number of HSP's gapped (non-prelim): 19
length of query: 322
length of database: 26,991,925
effective HSP length: 51
effective length of query: 270
effective length of database: 23,946,613
effective search space: 6465585510
effective search space used: 6465585510
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG853 Members:446 3pri:Y 1e-125
AAH53854.1 Unknown (protein for IMAGE:5194336) [Homo sapiens]
(1227 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9629.m05067|protein Chlorophyll A-B binding protein, puta... 495 e-140
9629.m03990|protein Chlorophyll A-B binding protein, puta... 494 e-139
9637.m01516|protein chlorophyll a/b-binding protein I pre... 491 e-139
9631.m03807|protein chlorophyll a/b binding protein 411 e-114
9635.m03724|protein chlorophyll a-b binding protein of lh... 344 3e-94
9639.m01284|protein chlorophyll a/b-binding protein CP26 ... 220 3e-57
9637.m00977|protein Chlorophyll A-B binding protein, puta... 219 6e-57
9634.m02114|protein chlorophyll a/b-binding protein precu... 142 1e-33
9635.m03882|protein LHCI-680, photosystem I antenna prote... 141 2e-33
9630.m05194|protein light-harvesting complex protein [imp... 134 4e-31
9630.m00958|protein chlorophyll a/b-binding protein type ... 125 2e-28
9637.m02343|protein AY086461 PSI type II chlorophyll a/b-... 124 3e-28
9639.m01283|protein chlorophyll a/b-binding protein CP26 ... 123 8e-28
9635.m03689|protein probable chlorophyll a/b-binding prot... 116 6e-26
9632.m03624|protein chlorophyll a/b-binding apoprotein CP... 81 4e-15
9630.m00957|protein chlorophyll a/b-binding protein type ... 78 4e-14
9629.m00408|protein expressed protein 68 3e-11
9629.m05067|protein Chlorophyll A-B binding protein, putative
Length = 265
Score = 495 bits (1260), Expect = e-140
Identities = 240/266 (90%), Positives = 254/266 (95%), Gaps = 2/266 (0%)
Frame = +2
Query: 86 MATTAMALSS-SSFAGKAVKDLPSSALFGEARVTMRKTAAKAKPVSSS-SPWYGSDRVLY 259
MA + MALSS ++ AGKAV + + +FGE RVTMRK+AAK KP ++S SPWYG+DRVLY
Sbjct: 1 MAASTMALSSPAALAGKAVAN---AKVFGEGRVTMRKSAAKPKPAAASGSPWYGADRVLY 57
Query: 260 LGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 439
LGPLSG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 58 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117
Query: 440 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 619
LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIW CQVVLMGAVEGYRVA
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWGCQVVLMGAVEGYRVA 177
Query: 620 GGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 799
GGPLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 800 PLENLADHLADPVNNNAWAFATNFVPGK 883
PLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAYATNFVPGK 265
9629.m03990|protein Chlorophyll A-B binding protein, putative
Length = 261
Score = 494 bits (1257), Expect = e-139
Identities = 236/266 (88%), Positives = 249/266 (92%)
Frame = +2
Query: 86 MATTAMALSSSSFAGKAVKDLPSSALFGEARVTMRKTAAKAKPVSSSSPWYGSDRVLYLG 265
MA MALSS + AGKA ++ +FGE R+TMRK+AAK KP +S SPWYG+DRVLYLG
Sbjct: 1 MAAATMALSSPALAGKA-----AAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLG 55
Query: 266 PLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 445
PLSG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 56 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 115
Query: 446 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGG 625
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AGG
Sbjct: 116 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGG 175
Query: 626 PLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 805
PLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 176 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 235
Query: 806 ENLADHLADPVNNNAWAFATNFVPGK 883
ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 236 ENLADHLADPVNNNAWAYATNFVPGK 261
9637.m01516|protein chlorophyll a/b-binding protein I precursor -
rice
Length = 265
Score = 491 bits (1251), Expect = e-139
Identities = 240/266 (90%), Positives = 249/266 (93%), Gaps = 1/266 (0%)
Frame = +2
Query: 86 MATTAMALSSSSFAGKAVKDLPSSALFGEARVTMRKTAAKAKPVSSS-SPWYGSDRVLYL 262
MA MALSS A A SSALFGEAR+TMRKTAAK KP +SS SPWYG+DRVLYL
Sbjct: 1 MAAATMALSSPVMARAAPST--SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYL 58
Query: 263 GPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 442
GPLSG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 59 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 118
Query: 443 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 622
ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AG
Sbjct: 119 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 178
Query: 623 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 802
GPLGE+VDPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 179 GPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 803 LENLADHLADPVNNNAWAFATNFVPGK 883
LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 239 LENLADHLADPVNNNAWAYATNFVPGK 265
9631.m03807|protein chlorophyll a/b binding protein
Length = 263
Score = 411 bits (1044), Expect = e-114
Identities = 202/266 (75%), Positives = 225/266 (83%), Gaps = 2/266 (0%)
Frame = +2
Query: 86 MATTAMALSSSSFAGKAVKDLPSSALFGEA--RVTMRKTAAKAKPVSSSSPWYGSDRVLY 259
MA +A+ ++SF G A + G++ R+TMR+T A S WYG DR Y
Sbjct: 1 MAASALH-QTTSFLGTAPRRDELVRRVGDSGGRITMRRTVKSAP----QSIWYGPDRPKY 55
Query: 260 LGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 439
LGP S PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+
Sbjct: 56 LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEI 115
Query: 440 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 619
L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRV
Sbjct: 116 LSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVG 175
Query: 620 GGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 799
GGPLGE +D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 176 GGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235
Query: 800 PLENLADHLADPVNNNAWAFATNFVPGK 883
P+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 236 PIENLFDHVADPVANNAWAYATNFVPGK 263
9635.m03724|protein chlorophyll a-b binding protein of lhcii type
iii, chloroplastprecursor (cab)
Length = 266
Score = 344 bits (872), Expect = 3e-94
Identities = 182/265 (68%), Positives = 198/265 (74%), Gaps = 5/265 (1%)
Frame = +2
Query: 86 MATTAMALSSSSFAGKAV---KDLPSSALFGEARVTMRKTAAKAKPVSSSSPWYGSDRVL 256
MA+T MA +S A K PS+A + AA + S WYG DRV
Sbjct: 1 MASTIMAPTSRVLAAKTPFLGHPRPSNAPVRDIAA-----AATGRITMSKELWYGPDRVK 55
Query: 257 YLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 436
YLGP S PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE
Sbjct: 56 YLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPE 115
Query: 437 LLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 613
+L + V F E VWFKAG+QIFS+GGLDYLGNP+LVHAQSILA+ QVVLMG VEGYR
Sbjct: 116 VLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYR 175
Query: 614 VAGGPLGEIVDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 790
+ G P + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVT
Sbjct: 176 INGLPGVGDGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 235
Query: 791 GKGPLENLADHLADPVNNNAWAFATNFVPG 880
GKGPLENL DHLADPV NNAW +AT F PG
Sbjct: 236 GKGPLENLLDHLADPVANNAWVYATKFTPG 265
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84180920
Number of Sequences: 59712
Number of extensions: 2787518
Number of successful extensions: 37641
Number of sequences better than 1.0e-10: 34
Number of HSP's better than 0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 37487
Number of HSP's gapped (non-prelim): 46
length of query: 409
length of database: 26,991,925
effective HSP length: 51
effective length of query: 357
effective length of database: 23,946,613
effective search space: 8548940841
effective search space used: 8548940841
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG859 Members:2104 3pri:Y 9e-99
BAB19812.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Triticum aestivum]
(1211 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9640.m01919|protein Ribulose bisphosphate carboxylase, sm... 324 1e-88
9640.m01925|protein Ribulose bisphosphate carboxylase, sm... 320 4e-87
9640.m01915|protein Ribulose bisphosphate carboxylase, sm... 319 5e-87
9640.m01725|protein Ribulose bisphosphate carboxylase, sm... 317 2e-86
9640.m01916|protein Ribulose bisphosphate carboxylase, sm... 241 2e-63
9640.m01926|protein Ribulose bisphosphate carboxylase, sm... 239 9e-63
9640.m01917|protein Ribulose bisphosphate carboxylase, sm... 190 5e-48
9630.m00509|protein Ribulose bisphosphate carboxylase, sm... 177 3e-44
9640.m01919|protein Ribulose bisphosphate carboxylase, small
subunit, putative
Length = 175
Score = 324 bits (823), Expect = 1e-88
Identities = 150/173 (86%), Positives = 163/173 (93%)
Frame = +2
Query: 197 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFE 376
MAPTVMASSATSVAPFQGLKSTAGLPVSRRSN A LGSVSNGGRI CMQVWPIEGIKKFE
Sbjct: 1 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNSAGLGSVSNGGRISCMQVWPIEGIKKFE 60
Query: 377 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 556
TLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYYDGRYWTMWKLPM
Sbjct: 61 TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM 120
Query: 557 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESG 715
FGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPPGCEESG
Sbjct: 121 FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESG 173
9640.m01925|protein Ribulose bisphosphate carboxylase, small
subunit, putative
Length = 175
Score = 320 bits (811), Expect = 4e-87
Identities = 146/173 (84%), Positives = 164/173 (94%)
Frame = +2
Query: 197 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFE 376
MAP+VMASSATSVAPFQGLKSTAGLPV+RRS+ +S G+VSNGGRIRCMQVWPIEGIKKFE
Sbjct: 1 MAPSVMASSATSVAPFQGLKSTAGLPVNRRSSSSSFGNVSNGGRIRCMQVWPIEGIKKFE 60
Query: 377 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 556
TLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYYDGRYWTMWKLPM
Sbjct: 61 TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM 120
Query: 557 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESG 715
FGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPPGCEESG
Sbjct: 121 FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESG 173
9640.m01915|protein Ribulose bisphosphate carboxylase, small
subunit
Length = 175
Score = 319 bits (810), Expect = 5e-87
Identities = 146/173 (84%), Positives = 162/173 (93%)
Frame = +2
Query: 197 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFE 376
MAPTVMASSATSVAPFQGLKSTAGLPVSRRS + G+VSNGGRI+CMQVWPIEGIKKFE
Sbjct: 1 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSTNSGFGNVSNGGRIKCMQVWPIEGIKKFE 60
Query: 377 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 556
TLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYYDGRYWTMWKLPM
Sbjct: 61 TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM 120
Query: 557 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESG 715
FGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPPGCEESG
Sbjct: 121 FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESG 173
9640.m01725|protein Ribulose bisphosphate carboxylase, small
subunit, putative
Length = 175
Score = 317 bits (805), Expect = 2e-86
Identities = 144/173 (83%), Positives = 163/173 (93%)
Frame = +2
Query: 197 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFE 376
MAP+VMASSAT+VAPFQGLKSTAG+PV+RRS +S G+VSNGGRIRCMQVWPIEGIKKFE
Sbjct: 1 MAPSVMASSATTVAPFQGLKSTAGMPVARRSGNSSFGNVSNGGRIRCMQVWPIEGIKKFE 60
Query: 377 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPM 556
TLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYYDGRYWTMWKLPM
Sbjct: 61 TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM 120
Query: 557 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESG 715
FGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPPGCEESG
Sbjct: 121 FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESG 173
9640.m01916|protein Ribulose bisphosphate carboxylase, small
subunit
Length = 128
Score = 241 bits (608), Expect = 2e-63
Identities = 106/126 (84%), Positives = 119/126 (94%)
Frame = +2
Query: 338 MQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGY 517
MQVWPIEGIKKFETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGY
Sbjct: 1 MQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGY 60
Query: 518 YDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPP 697
YDGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPP
Sbjct: 61 YDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPP 120
Query: 698 GCEESG 715
GCEESG
Sbjct: 121 GCEESG 126
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74667107
Number of Sequences: 59712
Number of extensions: 2184013
Number of successful extensions: 15429
Number of sequences better than 1.0e-10: 16
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15420
Number of HSP's gapped (non-prelim): 9
length of query: 403
length of database: 26,991,925
effective HSP length: 51
effective length of query: 352
effective length of database: 23,946,613
effective search space: 8429207776
effective search space used: 8429207776
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG867 Members:15 3pri:Y 7e-81
AAO38473.1 putative RNA helicase, 5'-partial [Oryza sativa
(japonica cultivar-group)]
(1983 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m05073|protein DEAD/DEAH box helicase, putative 593 e-169
9640.m02859|protein Similar to RNA helicase RH28 [importe... 180 6e-45
9630.m04110|protein DEAD/DEAH box helicase, putative 157 5e-38
9631.m01932|protein expressed protein 157 6e-38
9632.m04329|protein DEAD/DEAH box helicase, putative 155 2e-37
9632.m04328|protein DEAD/DEAH box helicase, putative 155 2e-37
9635.m04413|protein DEAD/DEAH box helicase, putative 152 2e-36
9638.m03197|protein putative RNA helicase 149 1e-35
9631.m04891|protein putative snRNP protein 149 2e-35
9631.m04890|protein putative snRNP protein 149 2e-35
9636.m03206|protein DEAD/DEAH box helicase, putative 142 2e-33
9635.m04558|protein DEAD/DEAH box helicase, putative 141 3e-33
9629.m04143|protein DEAD/DEAH box helicase, putative 139 2e-32
9639.m03514|protein Similar to AY088091 ATP-dependent RNA... 137 6e-32
9634.m04745|protein eukaryotic initiation factor 4a (eif4... 135 3e-31
9630.m00452|protein translational initiation factor eIF-4A 134 4e-31
9629.m00708|protein DEAD/DEAH box helicase, putative 134 5e-31
9629.m03481|protein Similar to RNA helicase, DRH1 133 9e-31
9635.m04682|protein DEAD/DEAH box helicase, putative 132 3e-30
9635.m00438|protein DEAD/DEAH box helicase, putative 131 6e-30
9631.m05073|protein DEAD/DEAH box helicase, putative
Length = 646
Score = 593 bits (1513), Expect = e-169
Identities = 338/574 (58%), Positives = 397/574 (68%), Gaps = 20/574 (3%)
Frame = +2
Query: 17 GGVKEEGKEAAAAA-----EEEEREVTFDELGLDEQLKRALRKKGLTKTTPIQREAIPLI 181
G EEG +AAA EEEEREV+FDELGLDEQLKRALRKKGL K TPIQREAI
Sbjct: 58 GAEGEEGPDAAARGGEEGKEEEEREVSFDELGLDEQLKRALRKKGLDKATPIQREAI--- 114
Query: 182 LEGKDVVAKAKTGSGKTFAYLLPLLQELLKLCKEGRIRKSASNALILVPTRELCQQVYNE 361
PL+ E + + + + A +L EL
Sbjct: 115 ----------------------PLILEGKDVVAKAKTGSGKTFAYLLPMLHEL------- 145
Query: 362 ASSLLELCTSKLKIVQVTASMSDKDIKLALSG-----PPNILVTTPACVAACISKGIVQG 526
+KL+ G PN+ + P
Sbjct: 146 -------------------------LKLSAEGRIRKSAPNVFILVPT------------- 167
Query: 527 SSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLH 706
L + +EA LL + C LK + + S + I ++ + P+I T +
Sbjct: 168 ----RELCQQVHNEASSLLEF-CTSKLKVVQVNASMSDKDIKVALSGPPNILVTTPACVA 222
Query: 707 NPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDKMLYILSLLKLELIQKKVLIFVNSIDN 886
+ + K+ + + + ISC AKDKMLYIL LLKLELIQKKVLIFVNSID+
Sbjct: 223 SCISKGIIRGSSIKESLSMMILDE--ISCDAKDKMLYILVLLKLELIQKKVLIFVNSIDS 280
Query: 887 AFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIATDDNKTKDAKQTNKES 1066
AF+LRLFLEKF IRS+VLNAELPQNSRLHII+AFNARLFDYLIATDDNK+K+ +Q NK +
Sbjct: 281 AFKLRLFLEKFGIRSSVLNAELPQNSRLHIIQAFNARLFDYLIATDDNKSKEERQANKGN 340
Query: 1067 KKDSKASRKHLQQTLDAEFGVVRGIDFKNVFT----------VVNFDMPPNPAGYIHRIG 1216
KKDS+ SRK LQQTLDAEFGVVRGIDFKNVFT VVN+DMPP+PAGY+HR+G
Sbjct: 341 KKDSRVSRKQLQQTLDAEFGVVRGIDFKNVFTFPFDLLFLKQVVNYDMPPDPAGYVHRVG 400
Query: 1217 RTGRANKTGASISLVSPEEENVFEEIEHMLQDVEKKDTNCILPFPLLTKNAVESLRYRAQ 1396
RTGRANKTGASISLVSP+E +FE+IE+ML+DVE +DT+CI PFPLLTKNAVESLRYRAQ
Sbjct: 401 RTGRANKTGASISLVSPKENGIFEDIENMLKDVENRDTSCISPFPLLTKNAVESLRYRAQ 460
Query: 1397 DVARSVTSRDIQEARRQDVKNEILNSEKLKAHFEENPTDLDLLKHDKLLTNKSIPAHLRD 1576
DVARSVT+RDI+EARRQD+KNEILNSEKLKAHF+ENP DLDLLKHDKLL+NK IPAHLRD
Sbjct: 461 DVARSVTTRDIKEARRQDIKNEILNSEKLKAHFDENPRDLDLLKHDKLLSNKEIPAHLRD 520
Query: 1577 VPEYLIDPTTKEASNAVKLSRAAMGLDNPGRKKRMGFRSGSGKSSDPLRTFSAE 1738
VPEYLIDPTTKEASN VKLSRAAM +D P R+KRMGF+ GSG+SSDPL+TFSAE
Sbjct: 521 VPEYLIDPTTKEASNVVKLSRAAMDIDKPRRRKRMGFKGGSGRSSDPLKTFSAE 574
9640.m02859|protein Similar to RNA helicase RH28 [imported] -
Arabidopsis thaliana
Length = 802
Score = 180 bits (453), Expect = 6e-45
Identities = 169/595 (28%), Positives = 274/595 (45%), Gaps = 26/595 (4%)
Frame = +2
Query: 26 KEEGKEAAAAAEEEEREVT---------------------FDELGLDEQLKRALRKKGLT 142
KEEG E AA EEE + + F EL L L RA G
Sbjct: 156 KEEGDEEAAEEEEETDKKSGVVDPSKFFASSEGASFHANSFLELNLSRPLLRACEALGYQ 215
Query: 143 KTTPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPLLQELLKLCKEGRIRKSASNALIL 322
K TPIQ IPL L G+D+ A TGSGKT A+ LP+L+ LL K R A LIL
Sbjct: 216 KPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPK----RVPAIRVLIL 271
Query: 323 VPTRELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAAC 502
PTREL QV++ L + + ++ + +S K ++AL P+I+V TP +
Sbjct: 272 TPTRELAAQVHSMIEKLAQF--TDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDH 329
Query: 503 ISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDID 682
+ + G E L+++ILDEAD LL +++ L+ PR Q++L SAT + +I+
Sbjct: 330 LRNSLSVG---LEDLAILILDEADRLLELGFSAEIQELIRMCPRRRQTMLFSATMTEEIN 386
Query: 683 KLTKLLLHNPFVL----TLTEVGHAKDDVVPKNVQQFWISCSAKDKMLYILSLLKLELIQ 850
+L L L+ P L +L ++VV I + + +L L L+ +
Sbjct: 387 ELVTLSLNKPVRLEADPSLKRPATLTEEVVR-------IRRAREANQEAVLLALCLKTFK 439
Query: 851 KKVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIATDDN 1030
KV+IF + +A RL++ +++A L+ L Q RL +E F + D+LIATD
Sbjct: 440 DKVIIFSGTKHSAHRLKIIFGLSGMKAAELHGNLTQAQRLEALELFKKQEVDFLIATD-- 497
Query: 1031 KTKDAKQTNKESKKDSKASRKHLQQTLDAEFGVVRGIDFKNVFTVVNFDMPPNPAGYIHR 1210
RGID V TV+NF P + Y+HR
Sbjct: 498 -------------------------------VAARGIDIVGVRTVINFSCPRDARTYLHR 526
Query: 1211 IGRTGRANKTGASISLVSPEEENVFEEIEHMLQDVEKKDTNCILPFPLLTKNAVESLRYR 1390
+GRT RA + G +++ V+ ++ ++ + I K L ++ + V
Sbjct: 527 VGRTARAGREGYAVTFVTDDDRSLLKAI--------AKKAGSQLKSRIVAEKPVAECAKL 578
Query: 1391 AQDVARSVTSRDIQEARRQDVKNEILNSEKLKAHFEENPTDLDLLKH-DKLLTNKSIPAH 1567
+++ + S IQE R + IL +++A EN ++ H D++ +
Sbjct: 579 IEELEDQI-STIIQEEREE----RILRKAEMEATKAEN-----MIAHKDEIYSRPKRTWF 628
Query: 1568 LRDVPEYLIDPTTKEASNAVKLSRAAMGLDNPGRKKRMGFRSGSGKSSDPLRTFSAEGKS 1747
+ + L+ KE+++ K + + S + ++ LR K
Sbjct: 629 ATEKEKKLLAKAAKESTSQGKSNSGVI----------------SAQQAEDLRL-----KE 667
Query: 1748 RRRRGKEREGDDRRKRRKKAE 1810
++RR +E+ +++RR +AE
Sbjct: 668 KKRREREKNLPRKKRRRLEAE 688
9630.m04110|protein DEAD/DEAH box helicase, putative
Length = 508
Score = 157 bits (394), Expect = 5e-38
Identities = 115/408 (28%), Positives = 193/408 (47%)
Frame = +2
Query: 83 FDELGLDEQLKRALRKKGLTKTTPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPLLQE 262
F++ L +L + +KG + +PIQ E+IP+ L G D++A+AK G+GKT A+ +P L++
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 195
Query: 263 LLKLCKEGRIRKSASNALILVPTRELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIK 442
+ + K+A +ILVPTREL Q L + K++++ T S KD
Sbjct: 196 IDQ-------EKNAIQVVILVPTRELALQTSQVCKELGK--HLKIQVMVTTGGTSLKDDI 246
Query: 443 LALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVP 622
+ L P ++LV TP + KGI I + SM+I+DEAD LLS + ++ L+
Sbjct: 247 IRLYQPVHLLVGTPGRILDLTKKGI----CILKDCSMLIMDEADKLLSPEFQPSVEQLIR 302
Query: 623 HIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAK 802
++P S Q ++ SAT + + L P+V+ L D++ K + QF+ +
Sbjct: 303 YLPASRQILMFSATFPVTVKEFKDKYLPKPYVINL------MDELTLKGITQFYAFVEER 356
Query: 803 DKMLYILSLLKLELIQKKVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIE 982
K ++ L+ L +L + +IF NS++ L + + ++A++ Q+ R +
Sbjct: 357 QK-VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFH 415
Query: 983 AFNARLFDYLIATDDNKTKDAKQTNKESKKDSKASRKHLQQTLDAEFGVVRGIDFKNVFT 1162
F L+ TD RGID + V
Sbjct: 416 DFRNGACRNLVCTD---------------------------------LFTRGIDIQAVNV 442
Query: 1163 VVNFDMPPNPAGYIHRIGRTGRANKTGASISLVSPEEENVFEEIEHML 1306
V+NFD P Y+HR+GR+GR G +++L++ E+ IE L
Sbjct: 443 VINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQEL 490
9631.m01932|protein expressed protein
Length = 770
Score = 157 bits (393), Expect = 6e-38
Identities = 113/409 (27%), Positives = 196/409 (47%), Gaps = 1/409 (0%)
Frame = +2
Query: 80 TFDELGLDEQLKRALRKKGLTKTTPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPLLQ 259
+F + G QL A+ K+G K T IQ +A+P++L G+D++ AKTGSGKT A++LP++
Sbjct: 220 SFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIV 279
Query: 260 ELLKLCKEGRIRKSASNALILVPTRELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDI 439
++ + ++ ++ PTREL Q+Y EA + L++ V +S D
Sbjct: 280 HIMD--QPELEKEEGPIGVVCAPTRELAHQIYLEAKKFAK--PYNLRVAAVYGGVSKFDQ 335
Query: 440 KLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALV 619
L I++ TP + + ++ + ++LDEAD + E ++++V
Sbjct: 336 FKELKAGCEIVIATPGRLIDLLKMKALK----MFRATYLVLDEADRMFDLGFEPQIRSIV 391
Query: 620 PHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSA 799
I Q++L SAT +++L + +L +P +T+ +VG A +D+ Q + S
Sbjct: 392 GQIRPDRQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDI----KQVVNVLPSD 447
Query: 800 KDKMLYILSLLKLELIQKKVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHII 979
+KM ++L L + VL+F + L + R A L+ + Q SR+ +
Sbjct: 448 AEKMPWLLEKLPGMIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETL 507
Query: 980 EAFNARLFDYLIATDDNKTKDAKQTNKESKKDSKASRKHLQQTLDAEFGVVRGIDFKNVF 1159
+ F + ++ L+ATD RG+D K++
Sbjct: 508 QKFKSGVYHVLVATD---------------------------------VAARGLDIKSIK 534
Query: 1160 TVVNFDMPPNPAGYIHRIGRTGRA-NKTGASISLVSPEEENVFEEIEHML 1306
TVVNFD+ +IHRIGRTGRA +K G + +L++ +E E+ H L
Sbjct: 535 TVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEVRFAGELVHCL 584
9632.m04329|protein DEAD/DEAH box helicase, putative
Length = 498
Score = 155 bits (388), Expect = 2e-37
Identities = 111/408 (27%), Positives = 195/408 (47%)
Frame = +2
Query: 83 FDELGLDEQLKRALRKKGLTKTTPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPLLQE 262
F++ L +L + +KG + +PIQ E+IP+ L G D++A+AK G+GKT A+ +P L++
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 185
Query: 263 LLKLCKEGRIRKSASNALILVPTRELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIK 442
+ + K+A +ILVPTREL Q L + K++++ T S KD
Sbjct: 186 IDQ-------DKNAIQVVILVPTRELALQTSQVCKELGK--HLKIQVMVTTGGTSLKDDI 236
Query: 443 LALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVP 622
+ L P ++LV TP + KG+ + ++ SM+++DEAD LLS + ++ L+
Sbjct: 237 VRLYQPVHLLVGTPGRILDLTKKGV----CVLKNCSMLVMDEADKLLSPEFQPSIQELIR 292
Query: 623 HIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAK 802
++P + Q ++ SAT + + L P+V+ L D++ K + QF+ +
Sbjct: 293 YLPSNRQILMFSATFPVTVKEFKDKYLPKPYVINL------MDELTLKGITQFYAFVEER 346
Query: 803 DKMLYILSLLKLELIQKKVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIE 982
K ++ L+ L +L + +IF NS++ L + + ++A++ Q+ R +
Sbjct: 347 QK-VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFH 405
Query: 983 AFNARLFDYLIATDDNKTKDAKQTNKESKKDSKASRKHLQQTLDAEFGVVRGIDFKNVFT 1162
F L+ TD RGID + V
Sbjct: 406 DFRNGACRNLVCTD---------------------------------LFTRGIDIQAVNV 432
Query: 1163 VVNFDMPPNPAGYIHRIGRTGRANKTGASISLVSPEEENVFEEIEHML 1306
V+NFD P + Y+HR+GR+GR G +++L++ E+ IE L
Sbjct: 433 VINFDFPKSAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQEL 480
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111527076
Number of Sequences: 59712
Number of extensions: 3161080
Number of successful extensions: 95957
Number of sequences better than 1.0e-10: 82
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 95411
Number of HSP's gapped (non-prelim): 318
length of query: 661
length of database: 26,991,925
effective HSP length: 53
effective length of query: 607
effective length of database: 23,827,189
effective search space: 14463103723
effective search space used: 14463103723
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 161 (67.1 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG871 Members:20 3pri:Y 8e-39
T04407 probable phospholipid transfer protein precursor -
barley gb|AAA86694.1| phospholipid transfer protein precurs
(740 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9639.m02120|protein phospholipid transfer protein homolog... 135 1e-31
9639.m00145|protein Protease inhibitor/seed storage/LTP f... 134 2e-31
9640.m00134|protein phospholipid transfer protein homolog... 133 4e-31
9639.m00143|protein nonspecific lipid-transfer protein 2 ... 132 6e-31
9640.m00133|protein nonspecific lipid-transfer protein 2 ... 131 1e-30
9639.m00146|protein lipid-transfer protein - maize 121 1e-27
9640.m00135|protein lipid-transfer protein - maize 119 5e-27
9640.m00136|protein lipid-transfer protein - maize 117 2e-26
9640.m00132|protein lipid transfer protein 116 3e-26
9639.m00141|protein lipid transfer protein 116 3e-26
9639.m00148|protein lipid-transfer protein - maize 115 7e-26
9640.m00131|protein Similar to nonspecific lipid-transfer... 111 1e-24
9639.m00139|protein Similar to nonspecific lipid-transfer... 108 2e-23
9629.m05973|protein Protease inhibitor/seed storage/LTP f... 106 5e-23
9629.m05972|protein Protease inhibitor/seed storage/LTP f... 104 1e-22
9629.m05974|protein Protease inhibitor/seed storage/LTP f... 104 1e-22
9633.m03731|protein Protease inhibitor/seed storage/LTP f... 102 5e-22
9629.m01162|protein Protease inhibitor/seed storage/LTP f... 88 2e-17
9634.m03292|protein Protease inhibitor/seed storage/LTP f... 87 3e-17
9636.m00287|protein nonspecific lipid-transfer protein a ... 87 4e-17
9639.m02120|protein phospholipid transfer protein homolog - rice
Length = 117
Score = 135 bits (336), Expect = 1e-31
Identities = 68/110 (61%), Positives = 87/110 (78%), Gaps = 5/110 (4%)
Frame = +2
Query: 86 AATQLVLVAMVAAMLLVAADAA--ISCGQVSSALRPCISYASGNGGILPPACCSGVKRLA 259
A QLVLVA+VAA+LL A AA I+CGQV+SA+ PC++YA G G ACC+GV+ L
Sbjct: 2 ARAQLVLVAVVAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGGAGPSAACCNGVRSLK 61
Query: 260 GAAQSTADKQAVCKCIKSAA---AGLNAGKAAGIPSKCGVSVPYSISTSVDCSKI 415
AA++TAD++ C C+K+AA GLNAG AA IPSKCGVSVPY+IS S+DCS++
Sbjct: 62 SAARTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 116
9639.m00145|protein Protease inhibitor/seed storage/LTP family,
putative
Length = 116
Score = 134 bits (333), Expect = 2e-31
Identities = 70/110 (63%), Positives = 86/110 (77%), Gaps = 5/110 (4%)
Frame = +2
Query: 86 AATQLVLVAMVAAMLLVAADAA--ISCGQVSSALRPCISYASGNGGILPPACCSGVKRLA 259
A QLVLVA+VAA+LL A AA I+CGQV+SA+ PC++YA G G ACCSGV+ L
Sbjct: 2 ARAQLVLVAVVAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGAGP-SAACCSGVRSLK 60
Query: 260 GAAQSTADKQAVCKCIKSAAAG---LNAGKAAGIPSKCGVSVPYSISTSVDCSKI 415
AA STAD++ C C+K+AA G LNAG AA IPSKCGVSVPY+IS S+DCS++
Sbjct: 61 AAASSTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
9640.m00134|protein phospholipid transfer protein homolog - rice
Length = 116
Score = 133 bits (331), Expect = 4e-31
Identities = 69/110 (62%), Positives = 86/110 (77%), Gaps = 5/110 (4%)
Frame = +2
Query: 86 AATQLVLVAMVAAMLLVAADAA--ISCGQVSSALRPCISYASGNGGILPPACCSGVKRLA 259
A QLVLVA+VAA+LL A AA I+CGQV+SA+ PC++YA G G ACCSGV+ L
Sbjct: 2 ARAQLVLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGAGP-SAACCSGVRSLK 60
Query: 260 GAAQSTADKQAVCKCIKSAAAG---LNAGKAAGIPSKCGVSVPYSISTSVDCSKI 415
AA +TAD++ C C+K+AA G LNAG AA IPSKCGVSVPY+IS S+DCS++
Sbjct: 61 AAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
9639.m00143|protein nonspecific lipid-transfer protein 2 precursor
(ltp 2).
Length = 118
Score = 132 bits (329), Expect = 6e-31
Identities = 69/111 (62%), Positives = 86/111 (77%), Gaps = 7/111 (6%)
Frame = +2
Query: 86 AATQLVLVAMVAAMLLVAAD----AAISCGQVSSALRPCISYASGNGGILPPACCSGVKR 253
A QLVLVA+VAA LL+A AAISCGQV+SA+ PC+SYA G G ACCSGV+
Sbjct: 2 ARAQLVLVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGP-SAACCSGVRS 60
Query: 254 LAGAAQSTADKQAVCKCIKSAA---AGLNAGKAAGIPSKCGVSVPYSISTSVDCSKIH 418
L AA +TAD++ C C+K+ A +GLNAG AA IPSKCGVS+PY+IS S+DCS ++
Sbjct: 61 LNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSVN 118
9640.m00133|protein nonspecific lipid-transfer protein 2 precursor
(ltp 2).
Length = 117
Score = 131 bits (326), Expect = 1e-30
Identities = 68/111 (61%), Positives = 85/111 (76%), Gaps = 6/111 (5%)
Frame = +2
Query: 86 AATQLVLVAMVAAMLLVAAD---AAISCGQVSSALRPCISYASGNGGILPPACCSGVKRL 256
A QLVLVA+VAA+LL AAISCGQV+SA+ PC+SYA G G ACCSGV+ L
Sbjct: 2 ARAQLVLVALVAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGP-SAACCSGVRSL 60
Query: 257 AGAAQSTADKQAVCKCIKSAA---AGLNAGKAAGIPSKCGVSVPYSISTSVDCSKIH 418
AA +TAD++ C C+K+ A +GLNAG AA IPSKCGVS+PY+IS S+DCS ++
Sbjct: 61 NSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSVN 117
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43759486
Number of Sequences: 59712
Number of extensions: 1195617
Number of successful extensions: 11304
Number of sequences better than 1.0e-10: 41
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 11260
Number of HSP's gapped (non-prelim): 21
length of query: 246
length of database: 26,991,925
effective HSP length: 50
effective length of query: 196
effective length of database: 24,006,325
effective search space: 4705239700
effective search space used: 4705239700
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 157 (65.6 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG873 Members:52 3pri:Y 1e-115
AAB99745.1 HSP70 [Triticum aestivum]
(1393 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9629.m06146|protein dnaK protein 745 0.0
9633.m03578|protein dnaK protein 738 0.0
9633.m03577|protein dnaK protein 738 0.0
9639.m04467|protein dnaK-type molecular chaperone hsp70 -... 725 0.0
9639.m04468|protein dnaK-type molecular chaperone hsp70 -... 725 0.0
9631.m05972|protein heat shock protein cognate 70 724 0.0
9631.m01647|protein dnaK protein 722 0.0
9631.m01656|protein heat shock cognate 70 kda protein 695 0.0
9630.m00144|protein dnaK-type molecular chaperone BiP - rice 473 e-133
9631.m04907|protein putative luminal binding protein 446 e-125
9633.m03294|protein luminal binding protein 5 precursor (... 438 e-122
9636.m04621|protein BiP-isoform D 431 e-120
9633.m02768|protein luminal binding protein 4 precursor (... 418 e-116
9631.m01650|protein dnaK protein 408 e-113
9639.m00795|protein Similar to dnaK-type molecular chaper... 372 e-103
9639.m00796|protein Similar to hsp70 331 2e-90
9639.m00793|protein dnaK protein, putative 323 6e-88
9630.m05282|protein dnaK protein 305 2e-82
9631.m00134|protein dnaK protein 301 2e-81
9640.m01362|protein heat shock protein, 70K, chloroplast ... 295 1e-79
9629.m06146|protein dnaK protein
Length = 648
Score = 745 bits (1902), Expect = 0.0
Identities = 366/389 (94%), Positives = 378/389 (97%)
Frame = +1
Query: 1 GNPRSLRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFRKCM 180
GNPR+LRRLRTACERAKRTLSSTAQTTIEIDSLYEG+DFY+TITRARFEELNMDLFRKCM
Sbjct: 260 GNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCM 319
Query: 181 EPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAA 360
EPVEKCLRDAKMDKS+VHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAA
Sbjct: 320 EPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAA 379
Query: 361 VQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIPRNTTIPTKKEQVFSTYSDN 540
VQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMT LIPRNTTIPTKKEQVFSTYSDN
Sbjct: 380 VQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDN 439
Query: 541 QPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKT 720
QPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKT
Sbjct: 440 QPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKT 499
Query: 721 TGQKNKITITNDKGRLSKEEIEKMVQEAERYKAEDEEHKKKVDAKNALENYAYNMRNTVK 900
TGQKNKITITNDKGRLSKEEIEKMVQEAE+YKAEDEEHKKKVDAKNALENYAYNMRNT+K
Sbjct: 500 TGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIK 559
Query: 901 DEKIASKLGADDKKKVEDAVEGTISWLDGNQLAEAEEFEDKMKELEGICNPIIAKMYQGA 1080
D+KIASKL ADDKKK+EDA++G I+WLD NQLAEA+EFEDKMKELE ICNPIIAKMYQGA
Sbjct: 560 DDKIASKLSADDKKKIEDAIDGAINWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGA 619
Query: 1081 APDMGGGMGMDEDMPAGGGGAGPKIEEVD 1167
DMGG GMDED PAGG GAGPKIEEVD
Sbjct: 620 GADMGGAAGMDEDAPAGGSGAGPKIEEVD 648
9633.m03578|protein dnaK protein
Length = 646
Score = 738 bits (1885), Expect = 0.0
Identities = 366/389 (94%), Positives = 376/389 (96%)
Frame = +1
Query: 1 GNPRSLRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFRKCM 180
GNPR+LRRLRTACERAKRTLSSTAQTTIEIDSLYEG+DFYTTITRARFEELNMDLFRKCM
Sbjct: 260 GNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCM 319
Query: 181 EPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAA 360
EPVEKCLRDAKMDKS+VHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAA
Sbjct: 320 EPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAA 379
Query: 361 VQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIPRNTTIPTKKEQVFSTYSDN 540
VQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMT LIPRNTTIPTKKEQVFSTYSDN
Sbjct: 380 VQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDN 439
Query: 541 QPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKT 720
QPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI VCFDIDANGILNVSAEDKT
Sbjct: 440 QPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKT 499
Query: 721 TGQKNKITITNDKGRLSKEEIEKMVQEAERYKAEDEEHKKKVDAKNALENYAYNMRNTVK 900
TGQKNKITITNDKGRLSKEEIEKMVQEAE+YKAEDEEHKKKVDAKNALENYAYNMRNT+K
Sbjct: 500 TGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIK 559
Query: 901 DEKIASKLGADDKKKVEDAVEGTISWLDGNQLAEAEEFEDKMKELEGICNPIIAKMYQGA 1080
DEKIASKL ADDKK++EDA++G ISWLD NQLAEA+EFEDKMKELEGICNPIIAKMYQG
Sbjct: 560 DEKIASKLAADDKKRIEDAIDGAISWLDTNQLAEADEFEDKMKELEGICNPIIAKMYQGP 619
Query: 1081 APDMGGGMGMDEDMPAGGGGAGPKIEEVD 1167
DM G GMDED PAGG GAGPKIEEVD
Sbjct: 620 GADMAG--GMDEDAPAGGSGAGPKIEEVD 646
9633.m03577|protein dnaK protein
Length = 558
Score = 738 bits (1885), Expect = 0.0
Identities = 366/389 (94%), Positives = 376/389 (96%)
Frame = +1
Query: 1 GNPRSLRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFRKCM 180
GNPR+LRRLRTACERAKRTLSSTAQTTIEIDSLYEG+DFYTTITRARFEELNMDLFRKCM
Sbjct: 172 GNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCM 231
Query: 181 EPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAA 360
EPVEKCLRDAKMDKS+VHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAA
Sbjct: 232 EPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAA 291
Query: 361 VQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIPRNTTIPTKKEQVFSTYSDN 540
VQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMT LIPRNTTIPTKKEQVFSTYSDN
Sbjct: 292 VQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDN 351
Query: 541 QPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKT 720
QPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI VCFDIDANGILNVSAEDKT
Sbjct: 352 QPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKT 411
Query: 721 TGQKNKITITNDKGRLSKEEIEKMVQEAERYKAEDEEHKKKVDAKNALENYAYNMRNTVK 900
TGQKNKITITNDKGRLSKEEIEKMVQEAE+YKAEDEEHKKKVDAKNALENYAYNMRNT+K
Sbjct: 412 TGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIK 471
Query: 901 DEKIASKLGADDKKKVEDAVEGTISWLDGNQLAEAEEFEDKMKELEGICNPIIAKMYQGA 1080
DEKIASKL ADDKK++EDA++G ISWLD NQLAEA+EFEDKMKELEGICNPIIAKMYQG
Sbjct: 472 DEKIASKLAADDKKRIEDAIDGAISWLDTNQLAEADEFEDKMKELEGICNPIIAKMYQGP 531
Query: 1081 APDMGGGMGMDEDMPAGGGGAGPKIEEVD 1167
DM G GMDED PAGG GAGPKIEEVD
Sbjct: 532 GADMAG--GMDEDAPAGGSGAGPKIEEVD 558
9639.m04467|protein dnaK-type molecular chaperone hsp70 - rice
(fragment)
Length = 649
Score = 725 bits (1852), Expect = 0.0
Identities = 356/389 (91%), Positives = 374/389 (95%)
Frame = +1
Query: 1 GNPRSLRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFRKCM 180
GNPR+LRRLRTACERAKRTLSSTAQTTIEIDSLYEG+DFY+TITRARFEELNMDLFRKCM
Sbjct: 261 GNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCM 320
Query: 181 EPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAA 360
EPVEKCLRDAKMDKS+VHDVVLVGGSTRIP+VQQLLQDFFNGKELCK+INPDEAVAYGAA
Sbjct: 321 EPVEKCLRDAKMDKSSVHDVVLVGGSTRIPRVQQLLQDFFNGKELCKNINPDEAVAYGAA 380
Query: 361 VQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIPRNTTIPTKKEQVFSTYSDN 540
VQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMT LIPRNTTIPTKKEQVFSTYSDN
Sbjct: 381 VQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDN 440
Query: 541 QPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKT 720
QPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKT
Sbjct: 441 QPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKT 500
Query: 721 TGQKNKITITNDKGRLSKEEIEKMVQEAERYKAEDEEHKKKVDAKNALENYAYNMRNTVK 900
TGQKNKITITNDKGRLSKEEIEKMVQEAE+YK+EDEEHKKKV++KNALENYAYNMRNT+K
Sbjct: 501 TGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNTIK 560
Query: 901 DEKIASKLGADDKKKVEDAVEGTISWLDGNQLAEAEEFEDKMKELEGICNPIIAKMYQGA 1080
DEKIASKL A DKKK+EDA++ I WLDGNQLAEA+EF+DKMKELEGICNPIIAKMYQGA
Sbjct: 561 DEKIASKLPAADKKKIEDAIDQAIQWLDGNQLAEADEFDDKMKELEGICNPIIAKMYQGA 620
Query: 1081 APDMGGGMGMDEDMPAGGGGAGPKIEEVD 1167
DM GGM D+ PAGG GAGPKIEEVD
Sbjct: 621 GADMAGGMDEDDAPPAGGSGAGPKIEEVD 649
9639.m04468|protein dnaK-type molecular chaperone hsp70 - rice
(fragment)
Length = 602
Score = 725 bits (1852), Expect = 0.0
Identities = 356/389 (91%), Positives = 374/389 (95%)
Frame = +1
Query: 1 GNPRSLRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFRKCM 180
GNPR+LRRLRTACERAKRTLSSTAQTTIEIDSLYEG+DFY+TITRARFEELNMDLFRKCM
Sbjct: 214 GNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCM 273
Query: 181 EPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAA 360
EPVEKCLRDAKMDKS+VHDVVLVGGSTRIP+VQQLLQDFFNGKELCK+INPDEAVAYGAA
Sbjct: 274 EPVEKCLRDAKMDKSSVHDVVLVGGSTRIPRVQQLLQDFFNGKELCKNINPDEAVAYGAA 333
Query: 361 VQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIPRNTTIPTKKEQVFSTYSDN 540
VQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMT LIPRNTTIPTKKEQVFSTYSDN
Sbjct: 334 VQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDN 393
Query: 541 QPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKT 720
QPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKT
Sbjct: 394 QPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKT 453
Query: 721 TGQKNKITITNDKGRLSKEEIEKMVQEAERYKAEDEEHKKKVDAKNALENYAYNMRNTVK 900
TGQKNKITITNDKGRLSKEEIEKMVQEAE+YK+EDEEHKKKV++KNALENYAYNMRNT+K
Sbjct: 454 TGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNTIK 513
Query: 901 DEKIASKLGADDKKKVEDAVEGTISWLDGNQLAEAEEFEDKMKELEGICNPIIAKMYQGA 1080
DEKIASKL A DKKK+EDA++ I WLDGNQLAEA+EF+DKMKELEGICNPIIAKMYQGA
Sbjct: 514 DEKIASKLPAADKKKIEDAIDQAIQWLDGNQLAEADEFDDKMKELEGICNPIIAKMYQGA 573
Query: 1081 APDMGGGMGMDEDMPAGGGGAGPKIEEVD 1167
DM GGM D+ PAGG GAGPKIEEVD
Sbjct: 574 GADMAGGMDEDDAPPAGGSGAGPKIEEVD 602
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111664052
Number of Sequences: 59712
Number of extensions: 4434840
Number of successful extensions: 79289
Number of sequences better than 1.0e-10: 54
Number of HSP's better than 0.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 79005
Number of HSP's gapped (non-prelim): 124
length of query: 464
length of database: 26,991,925
effective HSP length: 52
effective length of query: 411
effective length of database: 23,886,901
effective search space: 9817516311
effective search space used: 9817516311
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG875 Members:8 3pri:Y 3e-66
AAD39600.1 Similar to gb|U43629 integral membrane protein from
Beta vulgaris and is a member of the sugar transporter fam
(1020 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9633.m04731|protein Sugar transporter 314 1e-85
9633.m04617|protein Sugar transporter 308 9e-84
9633.m04618|protein major facilitator superfamily protein 273 3e-73
9639.m03910|protein Similar to sugar transporter-like pro... 185 8e-47
9631.m02426|protein BT000608 At5g18840/F17K4_90 175 9e-44
9631.m02425|protein Sugar transporter, putative 174 3e-43
9635.m03923|protein sugar transporter, putative 133 4e-31
9632.m05689|protein sugar transporter, putative 123 4e-28
9629.m07289|protein Sugar transporter 122 8e-28
9635.m03924|protein sugar transporter, putative 120 3e-27
9632.m03950|protein Sugar transporter 120 3e-27
9631.m00914|protein probable sugar transporter [imported]... 117 3e-26
9632.m05690|protein sugar transporter, putative 114 2e-25
9632.m04300|protein Sugar transporter 113 7e-25
9631.m00915|protein sorbitol transporter 112 9e-25
9640.m03206|protein sorbitol transporter 112 9e-25
9639.m03848|protein AF482011 sorbitol transporter 111 2e-24
9640.m03185|protein sorbitol transporter 111 3e-24
9629.m00336|protein hexose transporter 110 4e-24
9631.m01110|protein Sugar transporter 110 5e-24
9633.m04731|protein Sugar transporter
Length = 436
Score = 314 bits (797), Expect = 1e-85
Identities = 152/223 (68%), Positives = 193/223 (86%)
Frame = +3
Query: 9 QQRAAIRFQELNQKKFRMPLILGIGLLVLQQLSGINAILFYASSIFKAAGITNSDLATCG 188
++R IRF ++ QK++ +PL++GIGLLVLQQLSG+N ILFYA+SIFKAAG+TNS+LAT G
Sbjct: 214 RRRTTIRFADIKQKRYSVPLMIGIGLLVLQQLSGVNGILFYAASIFKAAGLTNSNLATFG 273
Query: 189 LGGIQVLATLVTTWLLDRAGRRILLIISSAGMTLSLLAVAVVFFIKDTVSQDSHMYYILS 368
LG +QV+AT VTTWL D+AGRR+LLIIS+ GMT++L+ V+V FF+KD ++ SH+Y ++S
Sbjct: 274 LGVVQVVATGVTTWLTDKAGRRLLLIISTTGMTITLVVVSVSFFVKDNITNGSHLYSVMS 333
Query: 369 MVSLLAIVAYVIAFSFGMGAIPWVIMSEILPVSIKSLAGSFATLANWLTSFGITMTANLL 548
M+SL+ +VA+VI+FS G+GAIPW+IMSEILPV+IKSLAGS ATLANWLT++ ITMTA+L+
Sbjct: 334 MLSLVGLVAFVISFSLGLGAIPWIIMSEILPVNIKSLAGSVATLANWLTAWLITMTASLM 393
Query: 549 LSWSAGGTFVSYMLVSAFTLVFVVLWVPETKGRTLEEIQWSFR 677
LSWS GGTF Y V A TLVFV LWVPETKGRTLEEI +SFR
Sbjct: 394 LSWSNGGTFAIYAAVCAGTLVFVCLWVPETKGRTLEEIAFSFR 436
9633.m04617|protein Sugar transporter
Length = 476
Score = 308 bits (781), Expect = 9e-84
Identities = 157/221 (71%), Positives = 180/221 (81%)
Frame = +3
Query: 12 QRAAIRFQELNQKKFRMPLILGIGLLVLQQLSGINAILFYASSIFKAAGITNSDLATCGL 191
+R +RF+ELNQKK+R PL++G GLLVLQ LSGIN ILFYAS IF+ AG TNSDLATC L
Sbjct: 276 KRTTVRFKELNQKKYRTPLLIGTGLLVLQNLSGINGILFYASRIFRDAGFTNSDLATCAL 335
Query: 192 GGIQVLATLVTTWLLDRAGRRILLIISSAGMTLSLLAVAVVFFIKDTVSQDSHMYYILSM 371
G IQ IS+AGMTLSLLAV+VVFF++ +S DSH +YILSM
Sbjct: 336 GAIQ---------------------ISTAGMTLSLLAVSVVFFLEGNISHDSHSFYILSM 374
Query: 372 VSLLAIVAYVIAFSFGMGAIPWVIMSEILPVSIKSLAGSFATLANWLTSFGITMTANLLL 551
+SL+A+VAY+I FSFGMGAIPWV+MSEILPVSIKSL GSFATLAN LTS+ ITMTANLLL
Sbjct: 375 ISLVALVAYIITFSFGMGAIPWVMMSEILPVSIKSLGGSFATLANMLTSWAITMTANLLL 434
Query: 552 SWSAGGTFVSYMLVSAFTLVFVVLWVPETKGRTLEEIQWSF 674
SWSAGGTF+SYM+VSAFTLVFV+ WVPETKGRTLEEIQ+SF
Sbjct: 435 SWSAGGTFLSYMIVSAFTLVFVIFWVPETKGRTLEEIQFSF 475
9633.m04618|protein major facilitator superfamily protein
Length = 447
Score = 273 bits (691), Expect = 3e-73
Identities = 138/176 (78%), Positives = 152/176 (85%)
Frame = +3
Query: 150 AAGITNSDLATCGLGGIQVLATLVTTWLLDRAGRRILLIISSAGMTLSLLAVAVVFFIKD 329
++G+TNSDLATC LG IQ ISSAGMTLSLLAVAVVFF+KD
Sbjct: 293 SSGLTNSDLATCALGAIQ---------------------ISSAGMTLSLLAVAVVFFLKD 331
Query: 330 TVSQDSHMYYILSMVSLLAIVAYVIAFSFGMGAIPWVIMSEILPVSIKSLAGSFATLANW 509
++SQDSHMYY LSM+SL+A+VA+VIAFSFGMGAIPW+IMSEILPVSIKSLAGSFATLANW
Sbjct: 332 SISQDSHMYYTLSMISLVALVAFVIAFSFGMGAIPWIIMSEILPVSIKSLAGSFATLANW 391
Query: 510 LTSFGITMTANLLLSWSAGGTFVSYMLVSAFTLVFVVLWVPETKGRTLEEIQWSFR 677
LTSFGITMTANL+LSWSAGGTFVSYM+VSAFTLVFV+LWVPETKGRTLEEIQWSFR
Sbjct: 392 LTSFGITMTANLMLSWSAGGTFVSYMVVSAFTLVFVILWVPETKGRTLEEIQWSFR 447
9639.m03910|protein Similar to sugar transporter-like protein
Length = 402
Score = 185 bits (466), Expect = 8e-47
Identities = 96/213 (45%), Positives = 132/213 (61%)
Frame = +3
Query: 33 QELNQKKFRMPLILGIGLLVLQQLSGINAILFYASSIFKAAGITNSDLATCGLGGIQVLA 212
Q+L + + P+I+G+GL+V QQ GIN ILFYAS F +AG + DL T +G IQ
Sbjct: 207 QDLFNRAYIRPVIVGVGLMVFQQFVGINGILFYASETFVSAGFASGDLGTILMGCIQAPI 266
Query: 213 TLVTTWLLDRAGRRILLIISSAGMTLSLLAVAVVFFIKDTVSQDSHMYYILSMVSLLAIV 392
T V L+DR+GRR LL+IS++G+ + L AV F++K
Sbjct: 267 TAVGALLMDRSGRRPLLLISTSGLLIGSLMSAVSFYLK---------------------- 304
Query: 393 AYVIAFSFGMGAIPWVIMSEILPVSIKSLAGSFATLANWLTSFGITMTANLLLSWSAGGT 572
Y+ ++S GMGA+PWVIMSEI P++IK + GSF TL NW S+ ++ N +SWS+ GT
Sbjct: 305 VYIASYSIGMGAVPWVIMSEIFPINIKGIGGSFVTLVNWSGSWAVSFAFNFFMSWSSSGT 364
Query: 573 FVSYMLVSAFTLVFVVLWVPETKGRTLEEIQWS 671
F + LV A ++F+V VPETKG+TLEEIQ S
Sbjct: 365 FFLFALVCAVAILFIVKIVPETKGKTLEEIQAS 397
9631.m02426|protein BT000608 At5g18840/F17K4_90
Length = 502
Score = 175 bits (440), Expect = 9e-44
Identities = 91/213 (42%), Positives = 138/213 (64%)
Frame = +3
Query: 27 RFQELNQKKFRMPLILGIGLLVLQQLSGINAILFYASSIFKAAGITNSDLATCGLGGIQV 206
R Q+L +K + +G+GL++ QQL GIN + FYASSIF +AG + L T +G IQ+
Sbjct: 282 RVQDLFLRKNIYAVTVGVGLMIFQQLGGINGVGFYASSIFTSAGFSGK-LGTILIGIIQI 340
Query: 207 LATLVTTWLLDRAGRRILLIISSAGMTLSLLAVAVVFFIKDTVSQDSHMYYILSMVSLLA 386
TL L+D++GRR+LL++S++G L + F++K +Q ++ + +L
Sbjct: 341 PITLFGAILMDKSGRRVLLMVSASGTFLGCFLTGISFYLK---AQGLFSEWVPEL-ALTG 396
Query: 387 IVAYVIAFSFGMGAIPWVIMSEILPVSIKSLAGSFATLANWLTSFGITMTANLLLSWSAG 566
I+ Y+ A+S GMG +PWV+MSEI + +K++ GS TL +WL SF I+ + + L+ WS+
Sbjct: 397 ILVYIGAYSIGMGPVPWVVMSEIFSIDMKAIGGSLVTLVSWLGSFAISYSFSFLMDWSSA 456
Query: 567 GTFVSYMLVSAFTLVFVVLWVPETKGRTLEEIQ 665
GTF + S T++FVV+ VPETKGRTLEEIQ
Sbjct: 457 GTFFMFSAASLITILFVVMVVPETKGRTLEEIQ 489
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59001132
Number of Sequences: 59712
Number of extensions: 1460504
Number of successful extensions: 5182
Number of sequences better than 1.0e-10: 88
Number of HSP's better than 0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 5013
Number of HSP's gapped (non-prelim): 86
length of query: 340
length of database: 26,991,925
effective HSP length: 51
effective length of query: 288
effective length of database: 23,946,613
effective search space: 6896624544
effective search space used: 6896624544
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG888 Members:314 3pri:Y 1e-109
NP_172750.1 calcium-binding protein, calreticulin -related
[Arabidopsis thaliana]
(1536 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9632.m03644|protein glyceraldehyde-3-phosphate dehydrogen... 748 0.0
9631.m00283|protein glyceraldehyde-3-phosphate dehydrogen... 560 e-159
9634.m04429|protein glyceraldehyde-3-phosphate dehydrogen... 309 1e-83
9630.m00697|protein glyceraldehyde-3-phosphate dehydrogen... 308 2e-83
9636.m00238|protein glyceraldehyde-3-phosphate dehydrogen... 301 2e-81
9632.m03894|protein glyceraldehyde-3-phosphate dehydrogen... 295 1e-79
9630.m03747|protein glyceraldehyde-3-phosphate dehydrogen... 289 6e-78
9636.m00239|protein glyceraldehyde-3-phosphate dehydrogen... 280 4e-75
9630.m03748|protein glyceraldehyde-3-phosphate dehydrogen... 280 5e-75
9636.m00240|protein glyceraldehyde-3-phosphate dehydrogen... 279 9e-75
9632.m03895|protein glyceraldehyde-3-phosphate dehydrogen... 272 9e-73
9629.m05120|protein retrotransposon protein, putative, Ty... 96 2e-19
9639.m04036|protein transposon protein, putative, CACTA, ... 90 1e-17
9631.m03557|protein putative protein kinase 89 2e-17
9632.m03281|protein transposon protein, putative, CACTA, ... 87 6e-17
9632.m03280|protein transposon protein, putative, CACTA, ... 87 6e-17
9636.m00525|protein dna-directed rna polymerase ii larges... 84 7e-16
9629.m00111|protein transposon protein, putative, CACTA, ... 82 3e-15
9629.m00112|protein transposon protein, putative, CACTA, ... 82 3e-15
9629.m00408|protein expressed protein 81 5e-15
9632.m03644|protein glyceraldehyde-3-phosphate dehydrogenase, type I
Length = 402
Score = 748 bits (1910), Expect = 0.0
Identities = 375/401 (93%), Positives = 388/401 (96%), Gaps = 1/401 (0%)
Frame = +2
Query: 23 MASPMLSTAMAPLQGGML-EFSGLRSSSSLPLRRNATSDDFMSAVSFRTYAVSTSGGSRK 199
MASPMLS A PLQGG L EFSGLRSSSSLPLRRNATSDDFM+AVSFRT+AV TSGG+R+
Sbjct: 1 MASPMLSAATVPLQGGGLSEFSGLRSSSSLPLRRNATSDDFMNAVSFRTHAVGTSGGARR 60
Query: 200 APTEAKLKVAINGFGRIGRNFLRCWHGRGDSSPLEVIAINDTGGVKQASHLLKYDSTLGI 379
APTEAKLKVAINGFGRIGRNFLRCWHGRGDSSPL+VIAINDTGGVKQASHLLKYDSTLGI
Sbjct: 61 APTEAKLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTGGVKQASHLLKYDSTLGI 120
Query: 380 FDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGEMGIDLVIEGTGVFVDRAGAGKHLEA 559
FDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGE+GIDLVIEGTGVFVDR GAGKH++A
Sbjct: 121 FDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQA 180
Query: 560 GAKKVLITAPGKGDIPTYVCGVNADLYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKG 739
GAKKVLITAPGKGDIPTYV GVNAD Y+ + IISNASCTTNCLAPFVK+LDQKFGIIKG
Sbjct: 181 GAKKVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKG 240
Query: 740 TMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALR 919
TMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALR
Sbjct: 241 TMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALR 300
Query: 920 VPTPNVSVVDLVVQVSKKTLAEEVNQAFRDAAANELKGILDVCDEPLVSVDFRCSDVSST 1099
VPTPNVSVVDLVVQVSKKTLAEEVNQAFRD+AANELKGIL+VCD PLVSVDFRCSDVS T
Sbjct: 301 VPTPNVSVVDLVVQVSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCT 360
Query: 1100 IDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQWK 1225
IDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQWK
Sbjct: 361 IDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQWK 402
9631.m00283|protein glyceraldehyde-3-phosphate dehydrogenase, type
I, putative
Length = 444
Score = 560 bits (1428), Expect = e-159
Identities = 292/401 (72%), Positives = 328/401 (80%), Gaps = 3/401 (0%)
Frame = +2
Query: 77 EFSGLRSSSSLPLRRNATSDDFMSAVSFRTYAVSTSGGSRKAPTEAKLKVAINGFGRIGR 256
+FSGLR S + A F + + A +T + +AP EAKLKVAINGFGRIGR
Sbjct: 32 DFSGLRPGSC-SISHAAREASFSDVLGSQLVARATGENAVRAPAEAKLKVAINGFGRIGR 90
Query: 257 NFLRCWHGRGDSSPLEVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGDNAISVDGKV 436
NFLRCWH R ++SPLEV+ +ND+GGV+ ASHLLKYDS LG F ADVK V D ISVDGK+
Sbjct: 91 NFLRCWHER-ENSPLEVVVVNDSGGVRNASHLLKYDSMLGTFKADVKIVDDQTISVDGKL 149
Query: 437 IKVVSDRNPSNLPWGEMGIDLVIEGTGVFVDRAGAGKHLEAGAKKVLITAPGKG-DIPTY 613
IKVVS+R+P LPW E+GID+VIEGTGVFVD GAGKH++AGAKKV+ITAP KG DIPTY
Sbjct: 150 IKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTY 209
Query: 614 VCGVNADLYTH-ADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDA 790
V GVN Y+H IISNASCTTNCLAPFVK+LD++FGI+KGTMTTTHSYTGDQRLLDA
Sbjct: 210 VLGVNEGDYSHEVANIISNASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDA 269
Query: 791 SHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSK 970
SHRDLRRARAAALNIVPTSTGAAKAVALVLP LKGKLNGIALRVPTPNVSVVDLV+ K
Sbjct: 270 SHRDLRRARAAALNIVPTSTGAAKAVALVLPQLKGKLNGIALRVPTPNVSVVDLVINTVK 329
Query: 971 KTL-AEEVNQAFRDAAANELKGILDVCDEPLVSVDFRCSDVSSTIDASLSMVMGDDMVKV 1147
+ A++VN AFR AAA L GILDVCD PLVSVDFRCSDVSSTIDASL+MVMGDDMVKV
Sbjct: 330 TGITADDVNAAFRKAAAGPLSGILDVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKV 389
Query: 1148 IAWYDNEWGYSQRVVDLADIVANQWK*TPPTAALPCQVTPLEIF 1279
+AWYDNEWGYSQRVVDLA +VA++W P AA+ PLE F
Sbjct: 390 VAWYDNEWGYSQRVVDLAHLVASKW----PGAAVQGSGDPLEDF 429
9634.m04429|protein glyceraldehyde-3-phosphate dehydrogenase, type
I, putative
Length = 415
Score = 309 bits (782), Expect = 1e-83
Identities = 165/358 (46%), Positives = 223/358 (62%), Gaps = 2/358 (0%)
Frame = +2
Query: 125 ATSDDFMSAVSFRTYAVSTSGGSRKAPTEAKLKVAINGFGRIGRNFLRCWHGRGDSSPLE 304
A+S S R A + ++ + K KV INGFGRIGR LR R D +E
Sbjct: 49 ASSSLASSVEPVRATATQAPLATHQSSSTEKTKVGINGFGRIGRLVLRIATNRDD---IE 105
Query: 305 VIAINDTG-GVKQASHLLKYDSTLGIFDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWG 481
V+A+ND K +++ KYDST G F +K V ++ + ++GK I V S R+PS++PWG
Sbjct: 106 VVAVNDPFIDAKYMAYMFKYDSTHGPFKGTIKVVDESTLEINGKKISVTSKRDPSDIPWG 165
Query: 482 EMGIDLVIEGTGVFVDRAGAGKHLEAGAKKVLITAPGKGDIPTYVCGVNADLYTHADTII 661
G + V+E +GVF A HL+ GA+KV+I+AP D P +V GVN Y + ++
Sbjct: 166 NFGAEYVVESSGVFTTTEKASAHLKGGARKVVISAPS-ADAPMFVVGVNEKNYNPSMNVV 224
Query: 662 SNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDA-SHRDLRRARAAALNIV 838
SNASCTTNCLAP K++ ++FGI +G MTT H+ T Q+ +D S +D R R A+ NI+
Sbjct: 225 SNASCTTNCLAPLAKIVHEEFGIAEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNII 284
Query: 839 PTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTLAEEVNQAFRDAAA 1018
P+STGAAKAV VLP L GKL G+A RVPTPNVSVVDL ++ K E+V A ++A+
Sbjct: 285 PSSTGAAKAVGKVLPALNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKEASE 344
Query: 1019 NELKGILDVCDEPLVSVDFRCSDVSSTIDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDL 1198
LKGIL DE +VS DF SS DA + + +K+++WYDNEWGYS RV+DL
Sbjct: 345 GSLKGILGYTDEDVVSNDFIGDTRSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDL 404
9630.m00697|protein glyceraldehyde-3-phosphate dehydrogenase, type
I, putative
Length = 474
Score = 308 bits (780), Expect = 2e-83
Identities = 160/328 (48%), Positives = 212/328 (63%), Gaps = 2/328 (0%)
Frame = +2
Query: 215 KLKVAINGFGRIGRNFLRCWHGRGDSSPLEVIAINDTG-GVKQASHLLKYDSTLGIFDAD 391
K KV INGFGRIGR LR R D +EV+A+ND K +++ KYDST G F
Sbjct: 138 KTKVGINGFGRIGRLVLRIATSRDD---IEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGS 194
Query: 392 VKPVGDNAISVDGKVIKVVSDRNPSNLPWGEMGIDLVIEGTGVFVDRAGAGKHLEAGAKK 571
+K V D+ + ++GK + + S R+P+++PWG G + V+E +GVF A HL+ GAKK
Sbjct: 195 IKVVDDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKK 254
Query: 572 VLITAPGKGDIPTYVCGVNADLYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTT 751
V+I+AP D P +V GVN Y ++SNASCTTNCLAP KV+ ++FGI++G MTT
Sbjct: 255 VVISAPS-ADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMTT 313
Query: 752 THSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPT 928
H+ T Q+ +D S +D R R AA NI+P+STGAAKAV VLP L GKL G+A RVPT
Sbjct: 314 VHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPT 373
Query: 929 PNVSVVDLVVQVSKKTLAEEVNQAFRDAAANELKGILDVCDEPLVSVDFRCSDVSSTIDA 1108
PNVSVVDL ++ K ++V A + A+ LKGIL DE +VS DF SS DA
Sbjct: 374 PNVSVVDLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFDA 433
Query: 1109 SLSMVMGDDMVKVIAWYDNEWGYSQRVVDL 1198
+ + +K+++WYDNEWGYS RV+DL
Sbjct: 434 KAGIGLSSSFMKLVSWYDNEWGYSNRVLDL 463
9636.m00238|protein glyceraldehyde-3-phosphate dehydrogenase, type I
Length = 337
Score = 301 bits (763), Expect = 2e-81
Identities = 158/328 (48%), Positives = 211/328 (64%), Gaps = 3/328 (0%)
Frame = +2
Query: 215 KLKVAINGFGRIGRNFLRCWHGRGDSSPLEVIAINDTG-GVKQASHLLKYDSTLGIFD-A 388
K+K+ INGFGRIGR R S +E++A+ND +++ KYD+ G + +
Sbjct: 3 KIKIGINGFGRIGRLVARV---ALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHS 59
Query: 389 DVKPVGDNAISVDGKVIKVVSDRNPSNLPWGEMGIDLVIEGTGVFVDRAGAGKHLEAGAK 568
D+K + + K + V RNP +PW E G + V+E TGVF D+ A HL+ GAK
Sbjct: 60 DIKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAK 119
Query: 569 KVLITAPGKGDIPTYVCGVNADLYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMT 748
KV+I+AP K D P +VCGVN D YT I+SNASCTTNCLAP KV+ FGII+G MT
Sbjct: 120 KVVISAPSK-DAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMT 178
Query: 749 TTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVP 925
T H+ T Q+ +D S +D R RAA+ NI+P+STGAAKAV VLP+L GKL G++ RVP
Sbjct: 179 TVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVP 238
Query: 926 TPNVSVVDLVVQVSKKTLAEEVNQAFRDAAANELKGILDVCDEPLVSVDFRCSDVSSTID 1105
T +VSVVDL V++ K + + A + A+ +LKGI+ +E LVS DF SS D
Sbjct: 239 TVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFD 298
Query: 1106 ASLSMVMGDDMVKVIAWYDNEWGYSQRVVDL 1198
A + + D+ VK++AWYDNEWGYS RV+DL
Sbjct: 299 AKAGIALNDNFVKLVAWYDNEWGYSNRVIDL 329
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116390734
Number of Sequences: 59712
Number of extensions: 4486352
Number of successful extensions: 89894
Number of sequences better than 1.0e-10: 49
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 87615
Number of HSP's gapped (non-prelim): 267
length of query: 512
length of database: 26,991,925
effective HSP length: 52
effective length of query: 459
effective length of database: 23,886,901
effective search space: 10964087559
effective search space used: 10964087559
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG892 Members:47 3pri:Y 1e-126
AAO72551.1 DNAJ-like protein [Oryza sativa (japonica
cultivar-group)]
(1744 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m04311|protein DnaJ central domain (4 repeats), puta... 790 0.0
9631.m04312|protein DnaJ central domain (4 repeats), puta... 787 0.0
9631.m05629|protein dnaJ protein homolog - potato 756 0.0
9630.m04241|protein DnaJ-like protein 640 0.0
9630.m04240|protein DnaJ-like protein 638 0.0
9640.m04169|protein Similar to dnaj protein homolog 2. [leek 328 2e-89
9633.m00566|protein DnaJ domain, putative 232 2e-60
9632.m04469|protein DnaJ domain, putative 231 3e-60
9633.m00289|protein heat shock protein, putative 211 3e-54
9630.m05561|protein expressed protein 199 1e-50
9633.m04568|protein Similar to probable heat shock protei... 192 2e-48
9633.m04567|protein Similar to probable heat shock protei... 191 3e-48
9633.m02439|protein DNAJ homologue 178 2e-44
9633.m02436|protein DNAJ homologue 178 2e-44
9636.m00581|protein DnaJ domain, putative 173 1e-42
9629.m01353|protein DnaJ domain, putative 172 1e-42
9634.m00168|protein Similar to DnaJ protein 170 6e-42
9631.m01145|protein DnaJ domain, putative 127 8e-29
9634.m01117|protein transposon protein, putative, mariner... 116 9e-26
9633.m03287|protein DnaJ domain, putative 112 2e-24
9631.m04311|protein DnaJ central domain (4 repeats), putative
Length = 417
Score = 790 bits (2017), Expect = 0.0
Identities = 385/422 (91%), Positives = 405/422 (95%), Gaps = 1/422 (0%)
Frame = +3
Query: 126 MFGRTPKKSDNTKYYEVLGVPKDAAQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 305
MFGR PKKSDNTKYYE+LGVPK A+QDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV
Sbjct: 1 MFGRAPKKSDNTKYYEILGVPKTASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 60
Query: 306 LSDPEKREIYDKYGEDALKEGMGGGGGGGVDPFDIFSSFFGPSFGGGGGGSSRGRRQRRG 485
LSDPEKREIYD+YGEDALKEGMGGGG VDPFDIFSSFFGPSFGGGG SSRGRRQRRG
Sbjct: 61 LSDPEKREIYDQYGEDALKEGMGGGGSH-VDPFDIFSSFFGPSFGGGG--SSRGRRQRRG 117
Query: 486 EDVVHPLKASLEDLYNGTSKKLSLSRSVLCSKCKGKGSKSGASMRCPGCQGSGMKVTIRQ 665
EDV+HPLK SLEDLYNGTSKKLSLSR+VLC+KCKGKGSKSGASMRCPGCQGSGMK+TIRQ
Sbjct: 118 EDVIHPLKVSLEDLYNGTSKKLSLSRNVLCAKCKGKGSKSGASMRCPGCQGSGMKITIRQ 177
Query: 666 LGPSMIQQVQHACNDCKGTGESINDKDRCPGCKGEKVLQEKKVLEVHVEKGMQHNQKITF 845
LGPSMIQQ+Q CN+CKGTGESIN+KDRCPGCKGEKV+QEKKVLEVHVEKGMQHNQKITF
Sbjct: 178 LGPSMIQQMQQPCNECKGTGESINEKDRCPGCKGEKVIQEKKVLEVHVEKGMQHNQKITF 237
Query: 846 PGEADEAPDTVTGDIVFVVQQKEHPKFKRKGDDLFYEHTISLTEALCGFQLVLTHLDNRQ 1025
PGEADEAPDTVTGDIVFV+QQK+H KFKRKGDDLFYEHT+SLTEALCGFQ VLTHLDNRQ
Sbjct: 238 PGEADEAPDTVTGDIVFVLQQKDHSKFKRKGDDLFYEHTLSLTEALCGFQFVLTHLDNRQ 297
Query: 1026 LLIKSNPGEVVKPDSFKAISDEGMPMYQRPFMKGKLYIHFTVEFPDSLAPDQCKALEAVL 1205
LLIKSNPGEVVKPD FKAI+DEGMPMYQRPFMKGKLYIHFTVEFPDSLAP+QCKALEAVL
Sbjct: 298 LLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFTVEFPDSLAPEQCKALEAVL 357
Query: 1206 PPKPASKLTDMELDECEETTMHDV-NMEEEMRRKAHAAAQEAYDEDDDEMPGGGAQRVQC 1382
PPKPAS+LT+ME+DECEETTMHDV N+EEEMRRKA AAQEAYDE DDEMP GGAQRVQC
Sbjct: 358 PPKPASQLTEMEIDECEETTMHDVNNIEEEMRRKAQ-AAQEAYDE-DDEMP-GGAQRVQC 414
Query: 1383 AQQ 1391
AQQ
Sbjct: 415 AQQ 417
9631.m04312|protein DnaJ central domain (4 repeats), putative
Length = 416
Score = 787 bits (2010), Expect = 0.0
Identities = 384/422 (90%), Positives = 404/422 (94%), Gaps = 1/422 (0%)
Frame = +3
Query: 126 MFGRTPKKSDNTKYYEVLGVPKDAAQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 305
MFGR PKKSDNTKYYE+LGVPK A+QDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV
Sbjct: 1 MFGRAPKKSDNTKYYEILGVPKTASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 60
Query: 306 LSDPEKREIYDKYGEDALKEGMGGGGGGGVDPFDIFSSFFGPSFGGGGGGSSRGRRQRRG 485
LSDPEKREIYD+YGEDALKEGMGGGG VDPFDIFSSFFGPSFGGG SSRGRRQRRG
Sbjct: 61 LSDPEKREIYDQYGEDALKEGMGGGGSH-VDPFDIFSSFFGPSFGGG---SSRGRRQRRG 116
Query: 486 EDVVHPLKASLEDLYNGTSKKLSLSRSVLCSKCKGKGSKSGASMRCPGCQGSGMKVTIRQ 665
EDV+HPLK SLEDLYNGTSKKLSLSR+VLC+KCKGKGSKSGASMRCPGCQGSGMK+TIRQ
Sbjct: 117 EDVIHPLKVSLEDLYNGTSKKLSLSRNVLCAKCKGKGSKSGASMRCPGCQGSGMKITIRQ 176
Query: 666 LGPSMIQQVQHACNDCKGTGESINDKDRCPGCKGEKVLQEKKVLEVHVEKGMQHNQKITF 845
LGPSMIQQ+Q CN+CKGTGESIN+KDRCPGCKGEKV+QEKKVLEVHVEKGMQHNQKITF
Sbjct: 177 LGPSMIQQMQQPCNECKGTGESINEKDRCPGCKGEKVIQEKKVLEVHVEKGMQHNQKITF 236
Query: 846 PGEADEAPDTVTGDIVFVVQQKEHPKFKRKGDDLFYEHTISLTEALCGFQLVLTHLDNRQ 1025
PGEADEAPDTVTGDIVFV+QQK+H KFKRKGDDLFYEHT+SLTEALCGFQ VLTHLDNRQ
Sbjct: 237 PGEADEAPDTVTGDIVFVLQQKDHSKFKRKGDDLFYEHTLSLTEALCGFQFVLTHLDNRQ 296
Query: 1026 LLIKSNPGEVVKPDSFKAISDEGMPMYQRPFMKGKLYIHFTVEFPDSLAPDQCKALEAVL 1205
LLIKSNPGEVVKPD FKAI+DEGMPMYQRPFMKGKLYIHFTVEFPDSLAP+QCKALEAVL
Sbjct: 297 LLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFTVEFPDSLAPEQCKALEAVL 356
Query: 1206 PPKPASKLTDMELDECEETTMHDV-NMEEEMRRKAHAAAQEAYDEDDDEMPGGGAQRVQC 1382
PPKPAS+LT+ME+DECEETTMHDV N+EEEMRRKA AAQEAYDE DDEMP GGAQRVQC
Sbjct: 357 PPKPASQLTEMEIDECEETTMHDVNNIEEEMRRKAQ-AAQEAYDE-DDEMP-GGAQRVQC 413
Query: 1383 AQQ 1391
AQQ
Sbjct: 414 AQQ 416
9631.m05629|protein dnaJ protein homolog - potato
Length = 417
Score = 756 bits (1930), Expect = 0.0
Identities = 365/422 (86%), Positives = 389/422 (91%)
Frame = +3
Query: 126 MFGRTPKKSDNTKYYEVLGVPKDAAQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 305
MFGR PKKSDNT+YYEVLGVPKDA+QDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV
Sbjct: 1 MFGRAPKKSDNTRYYEVLGVPKDASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 60
Query: 306 LSDPEKREIYDKYGEDALKEGMGGGGGGGVDPFDIFSSFFGPSFGGGGGGSSRGRRQRRG 485
LSDPEKREIYD+YGEDALKEGMG GGG DPFDIFSSFFG GG GGGSSRGRRQRRG
Sbjct: 61 LSDPEKREIYDQYGEDALKEGMGPGGGMH-DPFDIFSSFFG---GGFGGGSSRGRRQRRG 116
Query: 486 EDVVHPLKASLEDLYNGTSKKLSLSRSVLCSKCKGKGSKSGASMRCPGCQGSGMKVTIRQ 665
EDVVHPLK SLE+LYNGTSKKLSLSR+VLCSKC GKGSKSGASM+C GCQGSGMKV IRQ
Sbjct: 117 EDVVHPLKVSLEELYNGTSKKLSLSRNVLCSKCNGKGSKSGASMKCSGCQGSGMKVQIRQ 176
Query: 666 LGPSMIQQVQHACNDCKGTGESINDKDRCPGCKGEKVLQEKKVLEVHVEKGMQHNQKITF 845
LGP MIQQ+QH CN+CKGTGE+I+DKDRCPGCKGEKV QEKKVLEV VEKGMQ+ QKITF
Sbjct: 177 LGPGMIQQMQHPCNECKGTGETISDKDRCPGCKGEKVAQEKKVLEVVVEKGMQNGQKITF 236
Query: 846 PGEADEAPDTVTGDIVFVVQQKEHPKFKRKGDDLFYEHTISLTEALCGFQLVLTHLDNRQ 1025
PGEADEAPDTVTGDI+FV+QQKEHPKFKRKGDDLFYEHT++LTEALCGFQ VLTHLDNRQ
Sbjct: 237 PGEADEAPDTVTGDIIFVLQQKEHPKFKRKGDDLFYEHTLNLTEALCGFQFVLTHLDNRQ 296
Query: 1026 LLIKSNPGEVVKPDSFKAISDEGMPMYQRPFMKGKLYIHFTVEFPDSLAPDQCKALEAVL 1205
LLIKS PGEVVKPDSFKA++DEGMPMYQRPFMKGKLYIHF+VEFPDSL PDQCKALE VL
Sbjct: 297 LLIKSKPGEVVKPDSFKAVNDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPDQCKALETVL 356
Query: 1206 PPKPASKLTDMELDECEETTMHDVNMEEEMRRKAHAAAQEAYDEDDDEMPGGGAQRVQCA 1385
PP+P S+ TDMELDECEET +DVN+EEEMRR+ QEAYDED+D M GGGAQRVQCA
Sbjct: 357 PPRPVSQYTDMELDECEETMPYDVNIEEEMRRRQQQQQQEAYDEDED-MHGGGAQRVQCA 415
Query: 1386 QQ 1391
QQ
Sbjct: 416 QQ 417
9630.m04241|protein DnaJ-like protein
Length = 421
Score = 640 bits (1632), Expect = 0.0
Identities = 308/422 (72%), Positives = 351/422 (82%), Gaps = 3/422 (0%)
Frame = +3
Query: 126 MFGRTPKKSDNTKYYEVLGVPKDAAQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 305
M+GR PKKS+NTKYYEVLGV K A QD+LKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV
Sbjct: 1 MYGRMPKKSNNTKYYEVLGVSKTATQDELKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 60
Query: 306 LSDPEKREIYDKYGEDALKEGMGGGGGGGV-DPFDIFSSFFGPSFGGGGGGSSRGRRQRR 482
L+DPEKREIYD+YGEDALKEGMGGG PFD+F F GG G RG RQ+R
Sbjct: 61 LNDPEKREIYDQYGEDALKEGMGGGSSSDFHSPFDLFEQIFQ---NRGGFGVGRGHRQKR 117
Query: 483 GEDVVHPLKASLEDLYNGTSKKLSLSRSVLCSKCKGKGSKSGASMRCPGCQGSGMKVTIR 662
GEDVVH +K SLEDLYNGT+KKLSLSR+ LC+KCKGKGSKSGA+ C GC G+GM+ R
Sbjct: 118 GEDVVHTMKVSLEDLYNGTTKKLSLSRNALCTKCKGKGSKSGAAATCHGCHGAGMRTITR 177
Query: 663 QLGPSMIQQVQHACNDCKGTGESINDKDRCPGCKGEKVLQEKKVLEVHVEKGMQHNQKIT 842
Q+G MIQQ+ C +C+G+GE I+DKD+CP CKG KV+Q+KKVLEVHVEKGMQH QKI
Sbjct: 178 QIGLGMIQQMNTVCPECRGSGEMISDKDKCPSCKGNKVVQQKKVLEVHVEKGMQHGQKIV 237
Query: 843 FPGEADEAPDTVTGDIVFVVQQKEHPKFKRKGDDLFYEHTISLTEALCGFQLVLTHLDNR 1022
F GEADEAPDTVTGDIVFV+Q K+HPKFKRK DDLF EHTISLTEALCGFQ VLTHLD R
Sbjct: 238 FQGEADEAPDTVTGDIVFVLQLKDHPKFKRKFDDLFTEHTISLTEALCGFQFVLTHLDGR 297
Query: 1023 QLLIKSNPGEVVKPDSFKAISDEGMPMYQRPFMKGKLYIHFTVEFPD--SLAPDQCKALE 1196
QLLIKSNPGEV+KP KAI+DEGMP + RPFMKG+L++ F VEFP+ +L P QC++LE
Sbjct: 298 QLLIKSNPGEVIKPGQHKAINDEGMPQHGRPFMKGRLFVEFNVEFPEPGALTPGQCRSLE 357
Query: 1197 AVLPPKPASKLTDMELDECEETTMHDVNMEEEMRRKAHAAAQEAYDEDDDEMPGGGAQRV 1376
+LPP+P ++L+DMELD+CEETTMHDVN+EEEMRR+ QEAYDEDDDE G G RV
Sbjct: 358 KILPPRPRNQLSDMELDQCEETTMHDVNIEEEMRRRQQHRRQEAYDEDDDEDAGAG-PRV 416
Query: 1377 QCAQQ 1391
QCAQQ
Sbjct: 417 QCAQQ 421
9630.m04240|protein DnaJ-like protein
Length = 420
Score = 638 bits (1629), Expect = 0.0
Identities = 308/422 (72%), Positives = 351/422 (82%), Gaps = 3/422 (0%)
Frame = +3
Query: 126 MFGRTPKKSDNTKYYEVLGVPKDAAQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 305
M+GR PKKS+NTKYYEVLGV K A QD+LKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV
Sbjct: 1 MYGRMPKKSNNTKYYEVLGVSKTATQDELKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 60
Query: 306 LSDPEKREIYDKYGEDALKEGMGGGGGGGV-DPFDIFSSFFGPSFGGGGGGSSRGRRQRR 482
L+DPEKREIYD+YGEDALKEGMGGG PFD+F F G GG RG RQ+R
Sbjct: 61 LNDPEKREIYDQYGEDALKEGMGGGSSSDFHSPFDLFEQIFQNRGGFGG----RGHRQKR 116
Query: 483 GEDVVHPLKASLEDLYNGTSKKLSLSRSVLCSKCKGKGSKSGASMRCPGCQGSGMKVTIR 662
GEDVVH +K SLEDLYNGT+KKLSLSR+ LC+KCKGKGSKSGA+ C GC G+GM+ R
Sbjct: 117 GEDVVHTMKVSLEDLYNGTTKKLSLSRNALCTKCKGKGSKSGAAATCHGCHGAGMRTITR 176
Query: 663 QLGPSMIQQVQHACNDCKGTGESINDKDRCPGCKGEKVLQEKKVLEVHVEKGMQHNQKIT 842
Q+G MIQQ+ C +C+G+GE I+DKD+CP CKG KV+Q+KKVLEVHVEKGMQH QKI
Sbjct: 177 QIGLGMIQQMNTVCPECRGSGEMISDKDKCPSCKGNKVVQQKKVLEVHVEKGMQHGQKIV 236
Query: 843 FPGEADEAPDTVTGDIVFVVQQKEHPKFKRKGDDLFYEHTISLTEALCGFQLVLTHLDNR 1022
F GEADEAPDTVTGDIVFV+Q K+HPKFKRK DDLF EHTISLTEALCGFQ VLTHLD R
Sbjct: 237 FQGEADEAPDTVTGDIVFVLQLKDHPKFKRKFDDLFTEHTISLTEALCGFQFVLTHLDGR 296
Query: 1023 QLLIKSNPGEVVKPDSFKAISDEGMPMYQRPFMKGKLYIHFTVEFPD--SLAPDQCKALE 1196
QLLIKSNPGEV+KP KAI+DEGMP + RPFMKG+L++ F VEFP+ +L P QC++LE
Sbjct: 297 QLLIKSNPGEVIKPGQHKAINDEGMPQHGRPFMKGRLFVEFNVEFPEPGALTPGQCRSLE 356
Query: 1197 AVLPPKPASKLTDMELDECEETTMHDVNMEEEMRRKAHAAAQEAYDEDDDEMPGGGAQRV 1376
+LPP+P ++L+DMELD+CEETTMHDVN+EEEMRR+ QEAYDEDDDE G G RV
Sbjct: 357 KILPPRPRNQLSDMELDQCEETTMHDVNIEEEMRRRQQHRRQEAYDEDDDEDAGAG-PRV 415
Query: 1377 QCAQQ 1391
QCAQQ
Sbjct: 416 QCAQQ 420
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121564168
Number of Sequences: 59712
Number of extensions: 4016774
Number of successful extensions: 66305
Number of sequences better than 1.0e-10: 61
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 66119
Number of HSP's gapped (non-prelim): 61
length of query: 581
length of database: 26,991,925
effective HSP length: 52
effective length of query: 528
effective length of database: 23,886,901
effective search space: 12612283728
effective search space used: 12612283728
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 161 (67.1 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG899 Members:228 3pri:Y 1e-124
S53126 dnaK-type molecular chaperone hsp70 - rice (fragment)
(2229 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m01647|protein dnaK protein 1268 0.0
9639.m04467|protein dnaK-type molecular chaperone hsp70 -... 1218 0.0
9633.m03578|protein dnaK protein 1213 0.0
9631.m05972|protein heat shock protein cognate 70 1211 0.0
9629.m06146|protein dnaK protein 1209 0.0
9631.m01656|protein heat shock cognate 70 kda protein 1170 0.0
9639.m04468|protein dnaK-type molecular chaperone hsp70 -... 1113 0.0
9633.m03577|protein dnaK protein 1044 0.0
9630.m00144|protein dnaK-type molecular chaperone BiP - rice 821 0.0
9631.m01650|protein dnaK protein 780 0.0
9631.m04907|protein putative luminal binding protein 774 0.0
9633.m03294|protein luminal binding protein 5 precursor (... 772 0.0
9636.m04621|protein BiP-isoform D 758 0.0
9633.m02768|protein luminal binding protein 4 precursor (... 732 0.0
9639.m00793|protein dnaK protein, putative 643 0.0
9629.m04774|protein dnaK protein 573 e-163
9639.m00795|protein Similar to dnaK-type molecular chaper... 573 e-163
9630.m05282|protein dnaK protein 565 e-161
9631.m00134|protein dnaK protein 555 e-158
9639.m00796|protein Similar to hsp70 551 e-156
9631.m01647|protein dnaK protein
Length = 650
Score = 1268 bits (3244), Expect = 0.0
Identities = 628/651 (96%), Positives = 646/651 (98%)
Frame = +1
Query: 97 MAGKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN 276
MAGKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKN
Sbjct: 1 MAGKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN 60
Query: 277 QVAMNPINTVFDAKRLIGRRFSDASVQSDAKLWPFKVIPGPADKPMIGVQYRGEDKQFSA 456
QVAMNPINTVFDAKRLIGRRFSD SVQSDAKLWPFKV+PGP DKPMIGVQY+GE+KQFSA
Sbjct: 61 QVAMNPINTVFDAKRLIGRRFSDTSVQSDAKLWPFKVLPGPGDKPMIGVQYKGEEKQFSA 120
Query: 457 EEISSMVLNKMKETAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP 636
EEISSMVLNKMKETAEAYLG+T+KNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP
Sbjct: 121 EEISSMVLNKMKETAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP 180
Query: 637 TAAAIAYGLDKKSTSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 816
TAAAIAYGLDKKS+SVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
Sbjct: 181 TAAAIAYGLDKKSSSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 240
Query: 817 NRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFY 996
NRMVNHFVQEFKRKNKKDI+GNPRALRRLRTACERAKRTLSSTAQTTIEIDSL+EGIDFY
Sbjct: 241 NRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY 300
Query: 997 TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFF 1176
TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFF
Sbjct: 301 TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFF 360
Query: 1177 NGKELCKSINPDEAVAYGAAVQAAILTGEGNEKVQDLLLLDVTPLSQGLETAGGVMTVLI 1356
NGKELCKSINPDEAVAYGAAVQAAILTGEGNEKVQDLLLLDVTPLSQGLETAGGVMTVLI
Sbjct: 361 NGKELCKSINPDEAVAYGAAVQAAILTGEGNEKVQDLLLLDVTPLSQGLETAGGVMTVLI 420
Query: 1357 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI 1536
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RTKDNNLLGKFELSGIPPAPRGVPQI
Sbjct: 421 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELSGIPPAPRGVPQI 480
Query: 1537 TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKAEDEEHKK 1716
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKAEDEEHKK
Sbjct: 481 TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKAEDEEHKK 540
Query: 1717 KVDSKNALENYAYNMRNTIKDDKIASKLPEADKKKIEDAIEGAITWLDNNQLAEADEFDD 1896
KVD+KN+LENYAYNMRNTIKDDKIASKLPEADKKKIEDAI+GAI+WLD+NQLAEA+EF+D
Sbjct: 541 KVDAKNSLENYAYNMRNTIKDDKIASKLPEADKKKIEDAIDGAISWLDSNQLAEAEEFED 600
Query: 1897 KMKELEGICNPIIAKMYQGAGAEMPGGMDEDAPASAAGGSSGPGPKIEEVD 2049
KMKELEG+CNPIIAKMYQGAGA+M GGMDEDAPA AAGGSSGPGPKIEEVD
Sbjct: 601 KMKELEGVCNPIIAKMYQGAGADMAGGMDEDAPA-AAGGSSGPGPKIEEVD 650
9639.m04467|protein dnaK-type molecular chaperone hsp70 - rice
(fragment)
Length = 649
Score = 1218 bits (3118), Expect = 0.0
Identities = 610/651 (93%), Positives = 631/651 (96%)
Frame = +1
Query: 97 MAGKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN 276
MAGKG+GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKN
Sbjct: 1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKN 60
Query: 277 QVAMNPINTVFDAKRLIGRRFSDASVQSDAKLWPFKVIPGPADKPMIGVQYRGEDKQFSA 456
QVAMNPINTVFDAKRLIGRRFSDASVQSD KLWPFKVI GP DKPMI VQY+GE+KQF+A
Sbjct: 61 QVAMNPINTVFDAKRLIGRRFSDASVQSDIKLWPFKVIAGPGDKPMIVVQYKGEEKQFAA 120
Query: 457 EEISSMVLNKMKETAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP 636
EEISSMVL KM+E AEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVI+GLNVMRIINEP
Sbjct: 121 EEISSMVLIKMREIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP 180
Query: 637 TAAAIAYGLDKKSTSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 816
TAAAIAYGLDKK+TSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
Sbjct: 181 TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 240
Query: 817 NRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFY 996
NRMVNHFVQEFKRKNKKDI+GNPRALRRLRTACERAKRTLSSTAQTTIEIDSL+EGIDFY
Sbjct: 241 NRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY 300
Query: 997 TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFF 1176
+TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKS+VHDVVLVGGSTRIPRVQQLLQDFF
Sbjct: 301 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPRVQQLLQDFF 360
Query: 1177 NGKELCKSINPDEAVAYGAAVQAAILTGEGNEKVQDLLLLDVTPLSQGLETAGGVMTVLI 1356
NGKELCK+INPDEAVAYGAAVQAAIL+GEGNEKVQDLLLLDVTPLS GLETAGGVMTVLI
Sbjct: 361 NGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI 420
Query: 1357 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI 1536
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI
Sbjct: 421 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 480
Query: 1537 TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKAEDEEHKK 1716
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKE+IEKMVQEAEKYK+EDEEHKK
Sbjct: 481 TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKK 540
Query: 1717 KVDSKNALENYAYNMRNTIKDDKIASKLPEADKKKIEDAIEGAITWLDNNQLAEADEFDD 1896
KV+SKNALENYAYNMRNTIKD+KIASKLP ADKKKIEDAI+ AI WLD NQLAEADEFDD
Sbjct: 541 KVESKNALENYAYNMRNTIKDEKIASKLPAADKKKIEDAIDQAIQWLDGNQLAEADEFDD 600
Query: 1897 KMKELEGICNPIIAKMYQGAGAEMPGGMDEDAPASAAGGSSGPGPKIEEVD 2049
KMKELEGICNPIIAKMYQGAGA+M GGMDED A AGG SG GPKIEEVD
Sbjct: 601 KMKELEGICNPIIAKMYQGAGADMAGGMDED-DAPPAGG-SGAGPKIEEVD 649
9633.m03578|protein dnaK protein
Length = 646
Score = 1213 bits (3104), Expect = 0.0
Identities = 604/648 (93%), Positives = 626/648 (96%)
Frame = +1
Query: 106 KGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 285
KG+GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 3 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 62
Query: 286 MNPINTVFDAKRLIGRRFSDASVQSDAKLWPFKVIPGPADKPMIGVQYRGEDKQFSAEEI 465
MNP NTVFDAKRLIGRRFSD SVQSD KLWPFKV+PGP DKPMI VQY+GE+KQF+AEEI
Sbjct: 63 MNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVVPGPGDKPMIVVQYKGEEKQFAAEEI 122
Query: 466 SSMVLNKMKETAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAA 645
SSMVL KM+E AEAYLG++IKNAVVTVPAYFNDSQRQATKDAGVI+GLNVMRIINEPTAA
Sbjct: 123 SSMVLIKMREIAEAYLGSSIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAA 182
Query: 646 AIAYGLDKKSTSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM 825
AIAYGLDKK+TS GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM
Sbjct: 183 AIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM 242
Query: 826 VNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFYTTI 1005
VNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSL+EGIDFYTTI
Sbjct: 243 VNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTI 302
Query: 1006 TRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFFNGK 1185
TRARFEELNMDLFRKCMEPVEKCLRDAKMDKS+VHDVVLVGGSTRIP+VQQLLQDFFNGK
Sbjct: 303 TRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGK 362
Query: 1186 ELCKSINPDEAVAYGAAVQAAILTGEGNEKVQDLLLLDVTPLSQGLETAGGVMTVLIPRN 1365
ELCKSINPDEAVAYGAAVQAAIL+GEGNEKVQDLLLLDVTPLS GLETAGGVMTVLIPRN
Sbjct: 363 ELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRN 422
Query: 1366 TTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVC 1545
TTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI VC
Sbjct: 423 TTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQINVC 482
Query: 1546 FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKAEDEEHKKKVD 1725
FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKE+IEKMVQEAEKYKAEDEEHKKKVD
Sbjct: 483 FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVD 542
Query: 1726 SKNALENYAYNMRNTIKDDKIASKLPEADKKKIEDAIEGAITWLDNNQLAEADEFDDKMK 1905
+KNALENYAYNMRNTIKD+KIASKL DKK+IEDAI+GAI+WLD NQLAEADEF+DKMK
Sbjct: 543 AKNALENYAYNMRNTIKDEKIASKLAADDKKRIEDAIDGAISWLDTNQLAEADEFEDKMK 602
Query: 1906 ELEGICNPIIAKMYQGAGAEMPGGMDEDAPASAAGGSSGPGPKIEEVD 2049
ELEGICNPIIAKMYQG GA+M GGMDEDAPA G SG GPKIEEVD
Sbjct: 603 ELEGICNPIIAKMYQGPGADMAGGMDEDAPA----GGSGAGPKIEEVD 646
9631.m05972|protein heat shock protein cognate 70
Length = 649
Score = 1211 bits (3099), Expect = 0.0
Identities = 598/648 (92%), Positives = 629/648 (96%)
Frame = +1
Query: 106 KGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 285
KG+GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVA
Sbjct: 5 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVA 64
Query: 286 MNPINTVFDAKRLIGRRFSDASVQSDAKLWPFKVIPGPADKPMIGVQYRGEDKQFSAEEI 465
MNPINTVFDAKRLIGRRFSDASVQSD K+WP+KVIPGP DKPMI VQY+GE+KQFSAEEI
Sbjct: 65 MNPINTVFDAKRLIGRRFSDASVQSDIKMWPYKVIPGPGDKPMIVVQYKGEEKQFSAEEI 124
Query: 466 SSMVLNKMKETAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAA 645
SSMVL KM+E AEAYLG+T+KNAVVTVPAYFNDSQRQATKDAGVI+GLNVMRIINEPTAA
Sbjct: 125 SSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAA 184
Query: 646 AIAYGLDKKSTSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM 825
AIAYGLDKK+TSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR+
Sbjct: 185 AIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRL 244
Query: 826 VNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFYTTI 1005
VNHFVQEFKRK+KKDISGNPRALRRLRT+CERAKRTLSSTAQTTIEIDSLFEG+DFY+TI
Sbjct: 245 VNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGVDFYSTI 304
Query: 1006 TRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFFNGK 1185
TRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFFNGK
Sbjct: 305 TRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFFNGK 364
Query: 1186 ELCKSINPDEAVAYGAAVQAAILTGEGNEKVQDLLLLDVTPLSQGLETAGGVMTVLIPRN 1365
ELCKSINPDEAVAYGAAVQAAIL+GEGNEKVQDLLLLDVTPLS GLETAGGVMTVLIPRN
Sbjct: 365 ELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRN 424
Query: 1366 TTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVC 1545
TTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQITVC
Sbjct: 425 TTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVC 484
Query: 1546 FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKAEDEEHKKKVD 1725
FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKE+IEKMVQ+AEKYK+EDEEHKKKVD
Sbjct: 485 FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQDAEKYKSEDEEHKKKVD 544
Query: 1726 SKNALENYAYNMRNTIKDDKIASKLPEADKKKIEDAIEGAITWLDNNQLAEADEFDDKMK 1905
+KN+LENYAYNMRNTI+D+KIASKLP DKKKIEDA+E AI WLDNNQLAE +EF+DKMK
Sbjct: 545 AKNSLENYAYNMRNTIQDEKIASKLPADDKKKIEDAVEQAIQWLDNNQLAEVEEFEDKMK 604
Query: 1906 ELEGICNPIIAKMYQGAGAEMPGGMDEDAPASAAGGSSGPGPKIEEVD 2049
ELEG+CNPIIAKMYQGAGA+M GGMD+DAPA+ G SG GPKIEEVD
Sbjct: 605 ELEGLCNPIIAKMYQGAGADMGGGMDDDAPAA---GGSGAGPKIEEVD 649
9629.m06146|protein dnaK protein
Length = 648
Score = 1209 bits (3094), Expect = 0.0
Identities = 607/648 (93%), Positives = 626/648 (95%), Gaps = 2/648 (0%)
Frame = +1
Query: 106 KGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 285
KG+GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVA
Sbjct: 3 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVA 62
Query: 286 MNPINTVFDAKRLIGRRFSDASVQSDAKLWPFKVIPGPADKPMIGVQYRGEDKQFSAEEI 465
MNPINTVFDAKRLIGRRFSD SVQSD KLWPFKVIPGP DKPMI VQY+GE+KQFSAEEI
Sbjct: 63 MNPINTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPGDKPMIVVQYKGEEKQFSAEEI 122
Query: 466 SSMVLNKMKETAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAA 645
SSMVL KM+E AEAYLG+ IKNAVVTVPAYFNDSQRQATKDAGVI+GLNVMRIINEPTAA
Sbjct: 123 SSMVLIKMREIAEAYLGSNIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAA 182
Query: 646 AIAYGLDKKSTSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM 825
AIAYGLDKK+TS GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM
Sbjct: 183 AIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM 242
Query: 826 VNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFYTTI 1005
VNHFV EFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSL+EGIDFY+TI
Sbjct: 243 VNHFVLEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTI 302
Query: 1006 TRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFFNGK 1185
TRARFEELNMDLFRKCMEPVEKCLRDAKMDKS+VHDVVLVGGSTRIP+VQQLLQDFFNGK
Sbjct: 303 TRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGK 362
Query: 1186 ELCKSINPDEAVAYGAAVQAAILTGEGNEKVQDLLLLDVTPLSQGLETAGGVMTVLIPRN 1365
ELCKSINPDEAVAYGAAVQAAIL+GEGNEKVQDLLLLDVTPLS GLETAGGVMTVLIPRN
Sbjct: 363 ELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRN 422
Query: 1366 TTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVC 1545
TTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVC
Sbjct: 423 TTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVC 482
Query: 1546 FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKAEDEEHKKKVD 1725
FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKE+IEKMVQEAEKYKAEDEEHKKKVD
Sbjct: 483 FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVD 542
Query: 1726 SKNALENYAYNMRNTIKDDKIASKLPEADKKKIEDAIEGAITWLDNNQLAEADEFDDKMK 1905
+KNALENYAYNMRNTIKDDKIASKL DKKKIEDAI+GAI WLD+NQLAEADEF+DKMK
Sbjct: 543 AKNALENYAYNMRNTIKDDKIASKLSADDKKKIEDAIDGAINWLDSNQLAEADEFEDKMK 602
Query: 1906 ELEGICNPIIAKMYQGAGAEMPG--GMDEDAPASAAGGSSGPGPKIEEVD 2049
ELE ICNPIIAKMYQGAGA+M G GMDEDAPA G SG GPKIEEVD
Sbjct: 603 ELESICNPIIAKMYQGAGADMGGAAGMDEDAPA----GGSGAGPKIEEVD 648
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 161341061
Number of Sequences: 59712
Number of extensions: 5493450
Number of successful extensions: 67808
Number of sequences better than 1.0e-10: 55
Number of HSP's better than 0.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 67429
Number of HSP's gapped (non-prelim): 118
length of query: 743
length of database: 26,991,925
effective HSP length: 53
effective length of query: 689
effective length of database: 23,827,189
effective search space: 16416933221
effective search space used: 16416933221
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 162 (67.5 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG901 Members:91 3pri:Y 1e-131
CAE01288.1 OSJNBa0020P07.5 [Oryza sativa (japonica
cultivar-group)]
(2854 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9630.m03028|protein AF367331 At1g56070/T6H22_13 1645 0.0
9632.m00189|protein Elongation factor G, domain IV, putative 1638 0.0
9629.m05250|protein Elongation factor G, domain IV, putative 1530 0.0
9629.m05092|protein Elongation factor G, domain IV, putative 1377 0.0
9634.m03897|protein Elongation factor G, domain IV, putative 619 e-176
9631.m04330|protein putative translation elongation factor 308 3e-83
9630.m03217|protein Similar to elongation factor EF-2 294 5e-79
9631.m03522|protein translation elongation factor G 138 5e-32
9634.m00447|protein Similar to GTP-binding membrane prote... 107 9e-23
9632.m04375|protein translation elongation factor G 106 3e-22
9630.m01743|protein Elongation factor Tu GTP binding doma... 104 1e-21
9630.m00559|protein Similar to GTP-binding protein LepA h... 100 2e-20
9629.m05356|protein Elongation factor Tu GTP binding doma... 97 1e-19
9630.m03028|protein AF367331 At1g56070/T6H22_13
Length = 843
Score = 1645 bits (4213), Expect = 0.0
Identities = 806/843 (95%), Positives = 829/843 (97%)
Frame = +1
Query: 115 MVKFTAEELRGIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 294
MVKFT EELR IMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR
Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 295 ADEAERGITIKSTGISLFYQMTPESLEMYKGDRDGDEYLINLIDSPGHVDFSSEVTAALR 474
ADEAERGITIKSTGISLFY+M+ ESL++YKG+RDG+EYLINLIDSPGHVDFSSEVTAALR
Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 475 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 654
ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR
Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 180
Query: 655 VIENANVIMATYEDVLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKM 834
VIENANVIMATYED LLGDVQVYPEKGTVAFSAGLHGWAFTL++FAKMYASKFGVDE KM
Sbjct: 181 VIENANVIMATYEDTLLGDVQVYPEKGTVAFSAGLHGWAFTLSSFAKMYASKFGVDEFKM 240
Query: 835 MERLWGENFFDPATKKWTSKNTGTATCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLKK 1014
MERLWGENFFDPATKKWT+KNTG+ATCKRGFVQFCYEPIKQII TCMNDQKDKLWPML+K
Sbjct: 241 MERLWGENFFDPATKKWTNKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQK 300
Query: 1015 LGVTMKNDEKDLMGKALMKRVMQTWLPASRALLEMMIFHLPSPSKAQRYRVENLYEGPLD 1194
LGV MK DEK+LMGKALMKRVMQTWLPAS ALLEMMI+HLPSPSKAQRYRVENLYEGPLD
Sbjct: 301 LGVVMKADEKELMGKALMKRVMQTWLPASNALLEMMIYHLPSPSKAQRYRVENLYEGPLD 360
Query: 1195 DVYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFAGRVATGMKVRIMGPNFVPGQ 1374
DVYA AIRNCDP+GPLMLYVSKMIPASDKGRFFAFGRVF+GRVATGMKVRIMGPN+VPGQ
Sbjct: 361 DVYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVATGMKVRIMGPNYVPGQ 420
Query: 1375 KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVDACPIRA 1554
KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVA+VGLDQFITKNATLTNEKE DACPIRA
Sbjct: 421 KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNATLTNEKESDACPIRA 480
Query: 1555 MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCSIEESGEHIIAGAGELHLEI 1734
MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLC+IEESGEHIIAGAGELHLEI
Sbjct: 481 MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEI 540
Query: 1735 CLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE 1914
CLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE
Sbjct: 541 CLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE 600
Query: 1915 AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI 2094
AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI
Sbjct: 601 AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI 660
Query: 2095 KDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQVIPTARRVIYASQLT 2274
KDSVVAGFQWASKEGALAEENMRGICFEVCDVVLH DAIHRGGGQVIPTARRVIYASQLT
Sbjct: 661 KDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLT 720
Query: 2275 AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFG 2454
AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFG
Sbjct: 721 AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFG 780
Query: 2455 FSSTLRAATSGQAFPQCVFDHWDIMSSDPLEAGSQSATLVTEIRKRKGLKEQMTPLSDFE 2634
FSS LRAATSGQAFPQCVFDHWD+M+SDPLEAGSQ++TLV +IRKRKGLKEQMTPLSDFE
Sbjct: 781 FSSQLRAATSGQAFPQCVFDHWDMMTSDPLEAGSQASTLVQDIRKRKGLKEQMTPLSDFE 840
Query: 2635 DKL 2643
DKL
Sbjct: 841 DKL 843
9632.m00189|protein Elongation factor G, domain IV, putative
Length = 843
Score = 1638 bits (4195), Expect = 0.0
Identities = 802/843 (95%), Positives = 826/843 (97%)
Frame = +1
Query: 115 MVKFTAEELRGIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 294
MVKFT EELR IMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR
Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 295 ADEAERGITIKSTGISLFYQMTPESLEMYKGDRDGDEYLINLIDSPGHVDFSSEVTAALR 474
ADEAERGITIKSTGISLFY+M+ ESL++YKG+RDG+EYLINLIDSPGHVDFSSEVTAALR
Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 475 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 654
ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR
Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 180
Query: 655 VIENANVIMATYEDVLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKM 834
VIENANVIMATYED LLGDVQVYPEKGTVAFSAGLHGWAFTL++FAKMYASKFGVDE+KM
Sbjct: 181 VIENANVIMATYEDTLLGDVQVYPEKGTVAFSAGLHGWAFTLSSFAKMYASKFGVDESKM 240
Query: 835 MERLWGENFFDPATKKWTSKNTGTATCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLKK 1014
MERLWGENFFDPATKKWT+K+TG+ATCKRGFVQFCYEPIKQII TCMNDQKDKLWPML+K
Sbjct: 241 MERLWGENFFDPATKKWTNKSTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQK 300
Query: 1015 LGVTMKNDEKDLMGKALMKRVMQTWLPASRALLEMMIFHLPSPSKAQRYRVENLYEGPLD 1194
LGV MK DEKDLMGKALMKRVMQTWLPAS ALLEMMI+HLPSPSKAQ+YRVENLYEGPLD
Sbjct: 301 LGVVMKADEKDLMGKALMKRVMQTWLPASNALLEMMIYHLPSPSKAQKYRVENLYEGPLD 360
Query: 1195 DVYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFAGRVATGMKVRIMGPNFVPGQ 1374
DVYA AIRNCDP+GPLMLYVSKMIPASDKGRFFAFGRVF+GRVATGMKVRIMGPN+VPGQ
Sbjct: 361 DVYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVATGMKVRIMGPNYVPGQ 420
Query: 1375 KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVDACPIRA 1554
KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVA+VGLDQFITKNATLTNEKE DACPIRA
Sbjct: 421 KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNATLTNEKEADACPIRA 480
Query: 1555 MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCSIEESGEHIIAGAGELHLEI 1734
MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLC+IEESGEHIIAGAGELHLEI
Sbjct: 481 MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEI 540
Query: 1735 CLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE 1914
CLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE
Sbjct: 541 CLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE 600
Query: 1915 AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI 2094
AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI
Sbjct: 601 AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI 660
Query: 2095 KDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQVIPTARRVIYASQLT 2274
KDSVVAGFQWASKEGALAEENMRGICFEVCDVVLH DAIHRGGGQVIPTARRVIYASQLT
Sbjct: 661 KDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLT 720
Query: 2275 AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFG 2454
AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFG
Sbjct: 721 AKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFG 780
Query: 2455 FSSTLRAATSGQAFPQCVFDHWDIMSSDPLEAGSQSATLVTEIRKRKGLKEQMTPLSDFE 2634
FSS LRAATSGQAFPQCVFDHWD+M+SDPLE SQ+ LV +IRKRKGLKEQMTPLSDFE
Sbjct: 781 FSSQLRAATSGQAFPQCVFDHWDMMTSDPLEVSSQANQLVLDIRKRKGLKEQMTPLSDFE 840
Query: 2635 DKL 2643
DKL
Sbjct: 841 DKL 843
9629.m05250|protein Elongation factor G, domain IV, putative
Length = 826
Score = 1530 bits (3918), Expect = 0.0
Identities = 746/819 (91%), Positives = 791/819 (96%), Gaps = 2/819 (0%)
Frame = +1
Query: 115 MVKFTAEELRGIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 294
MVKFT EE+R IMDKK+NIRNMSV+AHVDHGKSTLTDSLVAAAGIIAQ+VAGDVRMTD+R
Sbjct: 1 MVKFTVEEMRRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSR 60
Query: 295 ADEAERGITIKSTGISLFYQMTPESLEMYKGDRDGDEYLINLIDSPGHVDFSSEVTAALR 474
+DEAERGITIKSTGISL+Y+M+ ESL+ YKGDRDG+EYLINLIDSPGHVDFSSEVTAALR
Sbjct: 61 SDEAERGITIKSTGISLYYEMSDESLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 475 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 654
ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQV GEEAYQTFSR
Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVGGEEAYQTFSR 180
Query: 655 VIENANVIMATYEDVLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKM 834
VIENANVIMATYED LLGDVQVYPEKGTVAFSAGLHGWAFTL+NFAKMYASKFGVDE+KM
Sbjct: 181 VIENANVIMATYEDALLGDVQVYPEKGTVAFSAGLHGWAFTLSNFAKMYASKFGVDESKM 240
Query: 835 MERLWGENFFDPATKKWTSKNTGTATCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLKK 1014
MERLWGEN+FDP TKKWT K+TG+ TCKRGF+QFCYEPI+QII TCMNDQKDKL PML+K
Sbjct: 241 MERLWGENYFDPTTKKWTIKHTGSDTCKRGFIQFCYEPIRQIINTCMNDQKDKLLPMLQK 300
Query: 1015 LGVTMKNDEKDLMGKALMKRVMQTWLPASRALLEMMIFHLPSPSKAQRYRVENLYEGPLD 1194
LGVTMK DL GKALMKRVMQTWLPAS ALLEMMI+HLPSP+KAQRYRVENLYEGPLD
Sbjct: 301 LGVTMK----DLTGKALMKRVMQTWLPASNALLEMMIYHLPSPAKAQRYRVENLYEGPLD 356
Query: 1195 DVYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFAGRVATGMKVRIMGPNFVPGQ 1374
D+YA+AIRNCDP+GPLMLYVSKMIPASDKGRF+AFGRVF+GRVATGMKVRIMGPN+ PGQ
Sbjct: 357 DIYASAIRNCDPEGPLMLYVSKMIPASDKGRFYAFGRVFSGRVATGMKVRIMGPNYAPGQ 416
Query: 1375 KKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVDACPIRA 1554
KKDLYVK+VQRTVIWMGKKQESVE VPCGNTVA+VGLDQFITKNATLTNEKEVDACPI+A
Sbjct: 417 KKDLYVKNVQRTVIWMGKKQESVEGVPCGNTVAMVGLDQFITKNATLTNEKEVDACPIKA 476
Query: 1555 MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCSIEESGEHIIAGAGELHLEI 1734
MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLC++EESGEHIIAGAGELHLEI
Sbjct: 477 MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTVEESGEHIIAGAGELHLEI 536
Query: 1735 CLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAE 1914
CLKDLQEDFMGGAEI VSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARP+EEGL E
Sbjct: 537 CLKDLQEDFMGGAEITVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPMEEGLPE 596
Query: 1915 AIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEI 2094
AID+GRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPN+VVDMCKGVQYLNEI
Sbjct: 597 AIDEGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNIVVDMCKGVQYLNEI 656
Query: 2095 KDSVVAGFQWASKEGALAEENM--RGICFEVCDVVLHTDAIHRGGGQVIPTARRVIYASQ 2268
KDSVVAGFQWASKEGALAEENM RGICFEVCDV+LH+DAIHRGGGQ+IPTARRVIYA+Q
Sbjct: 657 KDSVVAGFQWASKEGALAEENMRGRGICFEVCDVILHSDAIHRGGGQIIPTARRVIYAAQ 716
Query: 2269 LTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIES 2448
LTAKPRLLEPVYLVEIQAPENALGGIY VLNQKRGHVFEEMQRPGTPLYNIKAYLPVIES
Sbjct: 717 LTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIES 776
Query: 2449 FGFSSTLRAATSGQAFPQCVFDHWDIMSSDPLEAGSQSATL 2571
FGF+STLRAATSGQAFP VFDHW+++S DPLE G++ TL
Sbjct: 777 FGFTSTLRAATSGQAFPLFVFDHWEMLSVDPLEPGTRQLTL 817
9629.m05092|protein Elongation factor G, domain IV, putative
Length = 853
Score = 1377 bits (3525), Expect = 0.0
Identities = 663/843 (78%), Positives = 753/843 (88%), Gaps = 10/843 (1%)
Frame = +1
Query: 115 MVKFTAEELRGIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 294
MV+FTAEELR MDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQ+VAGDVRMTDTR
Sbjct: 1 MVRFTAEELRASMDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTR 60
Query: 295 ADEAERGITIKSTGISLFYQMTPESLEMYKGDRDGDEYLINLIDSPGHVDFSSEVTAALR 474
ADEAERGITIKSTGISL+Y+MT +L ++G RDG+ YLINLIDSPGH+DFSSEVTAALR
Sbjct: 61 ADEAERGITIKSTGISLYYEMTDAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALR 120
Query: 475 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 654
ITDGALVVVDCIEGVCVQTETVLRQ+L ERI+PVLTVNKMDRCFLELQ GEEAYQ FSR
Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQSLAERIKPVLTVNKMDRCFLELQQSGEEAYQAFSR 180
Query: 655 VIENANVIMATYEDVLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKM 834
VIE+ NV MA YED LGD V PEKGTVAFSAGLHGWAFTL+NFAKMY +KF VDEAKM
Sbjct: 181 VIESVNVTMAPYEDKNLGDCMVAPEKGTVAFSAGLHGWAFTLSNFAKMYKAKFKVDEAKM 240
Query: 835 MERLWGENFFDPATKKWTSK--NTGTATCKRGFVQFCYEPIKQIIATCMNDQKDKLWPML 1008
MERLWGEN+FD TKKWT+ +T + TC+RGFVQFCYEPI++II+ CMND K+ LW ML
Sbjct: 241 MERLWGENYFDHTTKKWTTTAPSTSSKTCQRGFVQFCYEPIRRIISACMNDDKENLWDML 300
Query: 1009 KKLGVTMKNDEKDLMGKALMKRVMQTWLPASRALLEMMIFHLPSPSKAQRYRVENLYEGP 1188
KL +T+K +EK+L GK LMKRVMQ WLPAS ALLEM++FHLPSP+KAQ+YRV+ LY+GP
Sbjct: 301 TKLKITLKAEEKELTGKKLMKRVMQAWLPASDALLEMIVFHLPSPAKAQQYRVDTLYDGP 360
Query: 1189 LDDVYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFAGRVATGMKVRIMGPNFVP 1368
LDD YA AIRNCDP GPLM+YVSKMIPASDKGRFFAFGRVF+G VATG KVRIMGPNFVP
Sbjct: 361 LDDPYATAIRNCDPKGPLMVYVSKMIPASDKGRFFAFGRVFSGTVATGNKVRIMGPNFVP 420
Query: 1369 GQKKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVDACPI 1548
G+KKDLYVK+VQRTVIWMGKKQESV+DVPCGNTVA+VGLDQFITKNATLT+EK VDA PI
Sbjct: 421 GEKKDLYVKTVQRTVIWMGKKQESVDDVPCGNTVAMVGLDQFITKNATLTDEKAVDAHPI 480
Query: 1549 RAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCSIEESGEHIIAGAGELHL 1728
+AMKFSVSPVVR +V CK AS+LPKLVEGLKRLAKSDP+V+C+IEESGEH+IAG G+LHL
Sbjct: 481 KAMKFSVSPVVRKSVACKNASELPKLVEGLKRLAKSDPLVVCTIEESGEHVIAGVGQLHL 540
Query: 1729 EICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPL---- 1896
EIC+KDLQEDFMGGAEIIV PP++++RETV + SCRTVMSKSPNKHNRLYMEARPL
Sbjct: 541 EICIKDLQEDFMGGAEIIVGPPIITYRETVTKNSCRTVMSKSPNKHNRLYMEARPLDKED 600
Query: 1897 ----EEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDM 2064
E L +AIDD RIGP+DD K R KILSEEFGWDKDLAKKIW FGPET GPN++VDM
Sbjct: 601 LQQDEPSLCKAIDDERIGPKDDIKERGKILSEEFGWDKDLAKKIWAFGPETKGPNLLVDM 660
Query: 2065 CKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQVIPTA 2244
CKGVQYL+EIKDSVVAGFQWASKEGALAEENMRG+CFE+CDV LH+D+IHRGGGQ+IPTA
Sbjct: 661 CKGVQYLSEIKDSVVAGFQWASKEGALAEENMRGVCFELCDVTLHSDSIHRGGGQLIPTA 720
Query: 2245 RRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIK 2424
RR +YA+QLTA PRL+EP+Y V+IQ P+ A+G +YGVLN + G + EE +R GTPL N++
Sbjct: 721 RRAMYAAQLTASPRLMEPMYQVDIQVPKTAVGNVYGVLNSRNGELVEESERTGTPLSNLR 780
Query: 2425 AYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDIMSSDPLEAGSQSATLVTEIRKRKGLK 2604
YLPV +SF F+ LRA TSGQAFPQC+F HW M SDP + GS++A ++T+IRKRKGLK
Sbjct: 781 FYLPVAKSFDFTEKLRAETSGQAFPQCIFHHWQTMRSDPFQEGSEAAKVITDIRKRKGLK 840
Query: 2605 EQMTPLSDFEDKL 2643
+ +TPLSD+EDKL
Sbjct: 841 DIITPLSDYEDKL 853
9634.m03897|protein Elongation factor G, domain IV, putative
Length = 997
Score = 619 bits (1578), Expect = e-176
Identities = 327/839 (38%), Positives = 508/839 (59%), Gaps = 22/839 (2%)
Frame = +1
Query: 127 TAEELRGIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIA---QEVAGDVRMTDTRA 297
T + L G+ +RN++++ H+ HGK+ D LV + E VR TDTR
Sbjct: 134 TTDFLLGLAANPALVRNVALVGHLQHGKTVFMDMLVEQTHEVDTFDSEGERHVRFTDTRV 193
Query: 298 DEAERGITIKSTGISLFYQMTPESLEMYKGDRDGDEYLINLIDSPGHVDFSSEVTAALRI 477
DE ER ++IK+ +SL + +G YL N++D+PGHV+FS E+TAALRI
Sbjct: 194 DEQERRVSIKAVPMSLVLE-----------GGNGKSYLCNIMDTPGHVNFSDEMTAALRI 242
Query: 478 TDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSRV 657
DGA++VVD EGV V TE +R A ER+ V+ +NK+DR EL++ +AY
Sbjct: 243 ADGAVLVVDAAEGVMVNTERAIRHATQERLPIVVVINKVDRLITELKLPPNDAYFKLRHT 302
Query: 658 IENANVIMATYEDVLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGV--DEAK 831
+E N ++++ + G V P G V F++G GW+FTL +FA +Y G+ D K
Sbjct: 303 LEAINDLISSCSTTVGGTQLVDPAAGNVCFASGSAGWSFTLQSFAHLYLKIHGIQFDHEK 362
Query: 832 MMERLWGENFFDPATKKWTSKNTGTATCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLK 1011
RLWG+ ++ P T+ + K R FV+F EP+ +I + + + K K+ L
Sbjct: 363 FASRLWGDLYYHPDTRTFKKKPPKEGA-NRSFVEFVLEPLYKIYSQVVGESKGKVEATLS 421
Query: 1012 KLGVTMKNDEKDLMGKALMKRVMQTWLPASRALLEMMIFHLPSPSKAQRYRVENLYEGPL 1191
+LGVT+ N L + L++ ++ S +M++ H+PS A ++E++Y GP
Sbjct: 422 ELGVTLSNAAYKLNVRPLLRLACRSIFGTSTGFTDMLVKHIPSVKDAAPRKIEHIYTGPQ 481
Query: 1192 DDVYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFAGRVATGMKVRIMGPNFVPG 1371
D +A++ CDP PLM+ V+K+ P SD F AFGRV++G + TG VR++G + P
Sbjct: 482 DSTIVDAMKKCDPHAPLMVNVTKLYPKSDCSVFDAFGRVYSGTIQTGQTVRVLGEGYSPD 541
Query: 1372 QKKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEK-EVDACPI 1548
++D+ VK V + ++ + + + P G+ V + G+D I K AT+ K + D
Sbjct: 542 DEEDMTVKEVTKLWVYQARYRVPISKAPAGSWVLIEGVDASIMKTATICPMKMDEDVYIF 601
Query: 1549 RAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCSIEESGEHIIAGAGELHL 1728
R ++F+ PVV++A + S+LPK+VEGL++++KS P+ + +EESGEH I G GEL+L
Sbjct: 602 RPLRFNTLPVVKIAAEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYL 661
Query: 1729 EICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGL 1908
+ +KDL+E + E+ V+ PVV+F ETV++ S +++PNK N++ M A PLE+GL
Sbjct: 662 DSIMKDLRELY-SEVEVKVADPVVTFCETVVDTSSMKCFAETPNKRNKITMVAEPLEKGL 720
Query: 1909 AEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQY-- 2082
AE I++G + K + + + WD A+ IW FGPE GPN+++D V+
Sbjct: 721 AEDIENGLVSLDSRQKEITDFFRQRYQWDVLAARSIWAFGPEKQGPNILLDDTLSVEVDK 780
Query: 2083 --LNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQVIPTARRVI 2256
LN +KDS+V GFQW ++EG L +E +R + F++ + + + +HRGGGQ+IPTARRV+
Sbjct: 781 NLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKILNANIAPEPLHRGGGQIIPTARRVV 840
Query: 2257 YASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLP 2436
Y++ L A PRL+EPVY +EIQ P + + IY VL+++RGHV ++ +PGTP+Y +KA+LP
Sbjct: 841 YSAFLMANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVTADVPKPGTPIYVVKAFLP 900
Query: 2437 VIESFGFSSTLRAATSGQAFPQCVFDHWDIMSSDPLEAG------------SQSATLVTE 2580
VIESFGF + LR T GQAF VFDHW I+ DPL+ + + +
Sbjct: 901 VIESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKNIVLRPLEPAPIQHLAREFMVK 960
Query: 2581 IRKRKGLKEQMTPLSDFEDKL 2643
R+RKG+ E ++ F++ +
Sbjct: 961 TRRRKGMSEDVSINKFFDEAM 981
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 174963476
Number of Sequences: 59712
Number of extensions: 4736758
Number of successful extensions: 15014
Number of sequences better than 1.0e-10: 26
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 14964
Number of HSP's gapped (non-prelim): 27
length of query: 951
length of database: 26,991,925
effective HSP length: 54
effective length of query: 896
effective length of database: 23,767,477
effective search space: 21295659392
effective search space used: 21295659392
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 163 (67.9 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG912 Members:130 3pri:Y .013
AAG44702.1 mitogaligin [Homo sapiens]
(1344 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9633.m00193|protein expressed protein 257 2e-68
9633.m00192|protein expressed protein 257 2e-68
9631.m05954|protein expressed protein 169 1e-41
9633.m00191|protein expressed protein 162 9e-40
9629.m00559|protein expressed protein 98 5e-20
9638.m02717|protein transposon protein, putative, CACTA, ... 92 3e-18
9634.m00954|protein transposon protein, putative, CACTA, ... 86 1e-16
9629.m06994|protein XYPPX repeat, putative 86 1e-16
9640.m01344|protein transposon protein, putative, CACTA, ... 86 2e-16
9630.m01170|protein RNA recognition motif. (a.k.a. RRM, R... 84 6e-16
9638.m02704|protein transposon protein, putative, CACTA, ... 82 2e-15
9635.m03213|protein transposon protein, putative, CACTA, ... 82 3e-15
9634.m05009|protein transposon protein, putative, CACTA, ... 80 1e-14
9634.m01059|protein transposon protein, putative, CACTA, ... 79 2e-14
9635.m04941|protein transposon protein, putative, CACTA, ... 78 3e-14
9638.m02715|protein transposon protein, putative, CACTA, ... 77 6e-14
9635.m02477|protein transposon protein, putative, CACTA, ... 75 2e-13
9635.m04045|protein transposon protein, putative, CACTA, ... 75 4e-13
9635.m03216|protein transposon protein, putative, CACTA, ... 75 4e-13
9629.m00792|protein transposon protein, putative, CACTA, ... 74 5e-13
9633.m00193|protein expressed protein
Length = 197
Score = 257 bits (651), Expect = 2e-68
Identities = 145/238 (60%), Positives = 145/238 (60%), Gaps = 4/238 (1%)
Frame = +3
Query: 327 SRAMGGGNDGHGYPPGGQGGYPPAGYPPQQGGYPPQQGYPPAPGAYPPPPGAYPPAPGAY 506
S M G GHGYPP GYPP GYPP G YPP PGAYPPPPGAYPP PGAY
Sbjct: 17 SNMMHGVAGGHGYPP--HQGYPPQGYPPPPGAYPPP------PGAYPPPPGAYPPPPGAY 68
Query: 507 PPAPGAGGSDGEKGLLSNIMHGVAGAHGGGHGYPSGGHGYPPQQHGYPPQQGYPPQHGYP 686
PP HGYP G GYPP GY PQHG
Sbjct: 69 PPQ---------------------------HGYPQPG--------GYPPPGGY-PQHG-- 90
Query: 687 PQQHGYPPQQHGYPPAGYPGSSGHSGSHG--GGIGMGGMLAGGAAAAAAAYGAHKISHGG 860
GYPPAGYPGSSGH G HG GG MG MLAGGAAAAAAAYGAHKIS
Sbjct: 91 -----------GYPPAGYPGSSGHQGGHGSSGGGHMGAMLAGGAAAAAAAYGAHKIS--S 137
Query: 861 HGGGGHMMGGMMGGHGGYGGGY-GHHGGKFKHGKHG-HGKFKHGKHGKHGMFGGGGKFKK 1034
HG GGHM G GG GGYG GY GHHGGKFKHGKHG HGKFKHGKHG HGMF GGGKFKK
Sbjct: 138 HGHGGHMGYGGHGGFGGYGHGYGGHHGGKFKHGKHGHHGKFKHGKHG-HGMF-GGGKFKK 195
Query: 1035 WK 1040
WK
Sbjct: 196 WK 197
9633.m00192|protein expressed protein
Length = 197
Score = 257 bits (651), Expect = 2e-68
Identities = 145/238 (60%), Positives = 145/238 (60%), Gaps = 4/238 (1%)
Frame = +3
Query: 327 SRAMGGGNDGHGYPPGGQGGYPPAGYPPQQGGYPPQQGYPPAPGAYPPPPGAYPPAPGAY 506
S M G GHGYPP GYPP GYPP G YPP PGAYPPPPGAYPP PGAY
Sbjct: 17 SNMMHGVAGGHGYPP--HQGYPPQGYPPPPGAYPPP------PGAYPPPPGAYPPPPGAY 68
Query: 507 PPAPGAGGSDGEKGLLSNIMHGVAGAHGGGHGYPSGGHGYPPQQHGYPPQQGYPPQHGYP 686
PP HGYP G GYPP GY PQHG
Sbjct: 69 PPQ---------------------------HGYPQPG--------GYPPPGGY-PQHG-- 90
Query: 687 PQQHGYPPQQHGYPPAGYPGSSGHSGSHG--GGIGMGGMLAGGAAAAAAAYGAHKISHGG 860
GYPPAGYPGSSGH G HG GG MG MLAGGAAAAAAAYGAHKIS
Sbjct: 91 -----------GYPPAGYPGSSGHQGGHGSSGGGHMGAMLAGGAAAAAAAYGAHKIS--S 137
Query: 861 HGGGGHMMGGMMGGHGGYGGGY-GHHGGKFKHGKHG-HGKFKHGKHGKHGMFGGGGKFKK 1034
HG GGHM G GG GGYG GY GHHGGKFKHGKHG HGKFKHGKHG HGMF GGGKFKK
Sbjct: 138 HGHGGHMGYGGHGGFGGYGHGYGGHHGGKFKHGKHGHHGKFKHGKHG-HGMF-GGGKFKK 195
Query: 1035 WK 1040
WK
Sbjct: 196 WK 197
9631.m05954|protein expressed protein
Length = 180
Score = 169 bits (423), Expect = 1e-41
Identities = 115/235 (48%), Positives = 123/235 (51%), Gaps = 9/235 (3%)
Frame = +3
Query: 336 MGGGNDGHGYPPGGQG--GYPPAGYPPQQGGYPPQQGYPPAPGAYPPPPGAYPPA-PGAY 506
MGG D H +G G P+GYP G YP QGYP +PG Y P PG YP A PG Y
Sbjct: 1 MGGRKDNHDSSNADKGFHGAYPSGYP---GAYPLMQGYPNSPGQY-PTPGGYPSAPPGQY 56
Query: 507 PPAPGAGGSDGEKGLLSNIMHGVAGAHGGGHGYPSGGHGYPPQQHGYPPQQGYPPQHGYP 686
PPA GYP G YPP GYPP QG P YP
Sbjct: 57 PPA---------------------------GGYP--GAQYPPS--GYPPSQGGYPPGAYP 85
Query: 687 PQQHGYPPQQHGYPPAGYPGSSGH-----SGSHGGGI-GMGGMLAGGAAAAAAAYGAHKI 848
P GY PQQ GYPPAGYPG GH G HG G G G +LAGGAA AAAA GAH +
Sbjct: 86 PS--GY-PQQPGYPPAGYPG-HGHGPPMQGGGHGAGASGYGALLAGGAAVAAAAVGAHMV 141
Query: 849 SHGGHGGGGHMMGGMMGGHGGYGGGYGHHGGKFKHGKHGHGKFKHGKHGKHGMFGGGGKF 1028
G GGGGH G +GHHGGKFK GKFKHGK+GKH FG
Sbjct: 142 RPG--GGGGH-------------GMFGHHGGKFK-----KGKFKHGKYGKHKKFG----- 176
Query: 1029 KKWK 1040
+KWK
Sbjct: 177 RKWK 180
9633.m00191|protein expressed protein
Length = 170
Score = 162 bits (407), Expect = 9e-40
Identities = 101/164 (61%), Positives = 110/164 (66%), Gaps = 9/164 (5%)
Frame = +3
Query: 525 GGSDGE---KGLLSNIMHGVAGAHGGGHGYPSGGHGYPPQQHGYPPQQGYPPQHGYPPQQ 695
GGS E +GL SN+MHGVAG GGGHGYP YPPQQ YPP PP PP
Sbjct: 2 GGSKDEQQDRGLFSNLMHGVAGG-GGGHGYP-----YPPQQGYYPP----PPTAYPPPPP 51
Query: 696 HGYPPQQHGYPPAGYPGSSG--HSGSHGGGIGMGGMLAGGAAAAAAAYGAHKISHGGHGG 869
GY +GYPPAGYPGSS G+HGG G GMLA GAAAAAAAYGAHK+SH GHG
Sbjct: 52 AGY-GGGYGYPPAGYPGSSAPFQHGNHGG--GNMGMLAAGAAAAAAAYGAHKLSH-GHGH 107
Query: 870 GGHMMGGMMGGHGGYGGGYGHHGGKF--KHGKHGHGKF--KHGKHGKHGMFGG 1016
GG+ GG GG +GG +GHHGG F HG HG G F HG HG G+FGG
Sbjct: 108 GGYGYGGHHGGL--FGGHHGHHGGLFGGHHGHHGGGLFGGHHGHHG--GLFGG 156
Score = 96.7 bits (237), Expect = 8e-20
Identities = 75/201 (37%), Positives = 88/201 (43%), Gaps = 13/201 (6%)
Frame = +3
Query: 336 MGGGNDGHGYPPGGQGGYPPAGYPPQQGGYPPQQG-YPPAPGAYPPPPGA-------YPP 491
+ GG GHGYP YPPQQG YPP P AYPPPP A YPP
Sbjct: 21 VAGGGGGHGYP------------------YPPQQGYYPPPPTAYPPPPPAGYGGGYGYPP 62
Query: 492 A--PGAYPPAPGAGGSDGEKGLLSNIMHGVA---GAHGGGHGYPSGGHGYPPQQHGYPPQ 656
A PG+ P G G+L+ A GAH HG+ GG+GY G
Sbjct: 63 AGYPGSSAPFQHGNHGGGNMGMLAAGAAAAAAAYGAHKLSHGHGHGGYGYGGHHGGL--- 119
Query: 657 QGYPPQHGYPPQQHGYPPQQHGYPPAGYPGSSGHSGSHGGGIGMGGMLAGGAAAAAAAYG 836
+ HG+ HG G G GH G HGGG+ +G
Sbjct: 120 --FGGHHGH----HG-----------GLFG--GHHGHHGGGL----------------FG 144
Query: 837 AHKISHGGHGGGGHMMGGMMGGHGGYGGGYGHHG 938
H HG H GG+ GGH G+GG +GHHG
Sbjct: 145 GH---HGHH-------GGLFGGHHGFGGHHGHHG 168
9629.m00559|protein expressed protein
Length = 124
Score = 97.5 bits (239), Expect = 5e-20
Identities = 62/154 (40%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Frame = +3
Query: 519 GAGGSDGEKGLLSNIMHGVA--GAHGGGHGYPS--GGHGYPPQQHGYPPQQGYPPQHG-Y 683
G G + G KGL+S ++ G G HGGGHGY GGHGYPP H YPPQHG Y
Sbjct: 9 GGGQNGGVKGLVSKLVGGGGHGGGHGGGHGYEQGYGGHGYPP--HAGAAHGAYPPQHGAY 66
Query: 684 PPQQHGYPPQQHGYPPAGYPGSSGHSGSHGGGIGMGGMLAGGAAAAAAAYGAHKISHGGH 863
PPQ YP HGY P YP ++ G H G H GH
Sbjct: 67 PPQHGAYP--GHGYVPGAYPSNAAPHGGHMGSY-----------------------HTGH 101
Query: 864 GGGGHMMGGMMGGHGGYGGGYGHHGGKFKHGKHGHGKFK 980
GGGG H+GGK K G G GK+K
Sbjct: 102 GGGGGR----------------HYGGKHKGGMFGGGKWK 124
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114351757
Number of Sequences: 59712
Number of extensions: 4980823
Number of successful extensions: 105700
Number of sequences better than 1.0e-10: 59
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 97160
Number of HSP's gapped (non-prelim): 1654
length of query: 448
length of database: 26,991,925
effective HSP length: 52
effective length of query: 395
effective length of database: 23,886,901
effective search space: 9435325895
effective search space used: 9435325895
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG917 Members:354 3pri:Y 1e-116
P12783 Phosphoglycerate kinase, cytosolic pir||TVWTGY
phosphoglycerate kinase (EC 2.7.2.3), cytosolic - wheat
(1645 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9634.m04442|protein phosphoglycerate kinase 723 0.0
9630.m00672|protein phosphoglycerate kinase 721 0.0
9630.m00671|protein phosphoglycerate kinase 721 0.0
9633.m03904|protein phosphoglycerate kinase (EC 2.7.2.3) ... 656 0.0
9630.m00670|protein phosphoglycerate kinase 615 e-176
9629.m05751|protein phosphoglycerate kinase 436 e-122
9638.m02624|protein phosphoglycerate kinase, putative 156 1e-37
9634.m04442|protein phosphoglycerate kinase
Length = 401
Score = 723 bits (1847), Expect = 0.0
Identities = 364/401 (90%), Positives = 389/401 (96%)
Frame = +2
Query: 113 MATKRSVGTLGEADLKGKKVFVRADLNVPLDDAQKITDDTRIRASIPTIKYLLEKGAKVI 292
MA+KRSVGTL E+DLKGKKVF+RADLNVPLDD+QKITDDTRIRAS+PTIK+L+ KGAKVI
Sbjct: 1 MASKRSVGTLTESDLKGKKVFLRADLNVPLDDSQKITDDTRIRASVPTIKFLMGKGAKVI 60
Query: 293 LASHLGRPKGVTPKFSLKPLVPRLSELLGLEVVMAPDCIGQEVEKLAAALPDGGVLLLEN 472
LASHLGRPKGVTPK+SLKPLVPRLSELLG++VVMA DCIG+EV+KLAA LPDGGVLLLEN
Sbjct: 61 LASHLGRPKGVTPKYSLKPLVPRLSELLGVDVVMANDCIGEEVQKLAATLPDGGVLLLEN 120
Query: 473 VRFYKEEEKNEPEFAKKLASVADLYVNDAFGTAHRAHASTEGVTKFLRPSVAGFLMQKEL 652
VRFYKEEEKN+PEFA KLASVADLYVNDAFGTAHRAHASTEGVTK+LRPSVAGFLMQKEL
Sbjct: 121 VRFYKEEEKNDPEFANKLASVADLYVNDAFGTAHRAHASTEGVTKYLRPSVAGFLMQKEL 180
Query: 653 DYLVGAVANPKKPFAAIVGGSKVSSKIGVIESLLAKVDILILGGGMIFTFYKAQGLAVGK 832
DYLVGAVANPKKPFAAIVGGSKVS+KIGVIESLLAKVDILILGGGMI+TFYKAQG AVGK
Sbjct: 181 DYLVGAVANPKKPFAAIVGGSKVSTKIGVIESLLAKVDILILGGGMIYTFYKAQGYAVGK 240
Query: 833 SLVEEDKLELATSLIETAKSKGVKLLLPTDVVVADKFAADAESKIVPATAIPDGWMGLDV 1012
SLVEEDKLELATSLIE AKSKGV LLLPTD+VVADKFAADAESK VPA+AIPDGWMGLD+
Sbjct: 241 SLVEEDKLELATSLIEKAKSKGVSLLLPTDIVVADKFAADAESKTVPASAIPDGWMGLDI 300
Query: 1013 GPDSIKTFAEALDTTKTVIWNGPMGVFEFEKFAAGTDAIAKQLAELTGKGVTTIIGGGDS 1192
GPDSIKTF+E LDTTKTVIWNGPMGVFEFEKFAAGTDAIAK+LA++T KGVTTIIGGGDS
Sbjct: 301 GPDSIKTFSETLDTTKTVIWNGPMGVFEFEKFAAGTDAIAKKLADITAKGVTTIIGGGDS 360
Query: 1193 VAAVEKAGLADKMSHISTGGGASLELLEGKPLPGVLALDEA 1315
VAAVEKAGLADKMSHISTGGGASLELLEGK LPGVLAL++A
Sbjct: 361 VAAVEKAGLADKMSHISTGGGASLELLEGKTLPGVLALNDA 401
9630.m00672|protein phosphoglycerate kinase
Length = 402
Score = 721 bits (1841), Expect = 0.0
Identities = 367/401 (91%), Positives = 389/401 (96%), Gaps = 1/401 (0%)
Frame = +2
Query: 113 MATKRSVGTLGEADLKGKKVFVRADLNVPLDDAQKITDDTRIRASIPTIKYLLEKGAKVI 292
MATKRSVGTLGEADL+GKKVFVRADLNVPLDDAQKITDDTRIRAS+PT+K+LLEKGAKVI
Sbjct: 1 MATKRSVGTLGEADLRGKKVFVRADLNVPLDDAQKITDDTRIRASVPTVKFLLEKGAKVI 60
Query: 293 LASHLGRPKGVTPKFSLKPLVPRLSELLGLEVVMAPDCIGQEVEKLAAALPDGGVLLLEN 472
LASHLGRPKGVTPK+SLKPLVPRLSELLG++VVMA DCIG+EVEKLAAALP+GGVLLLEN
Sbjct: 61 LASHLGRPKGVTPKYSLKPLVPRLSELLGVDVVMANDCIGEEVEKLAAALPEGGVLLLEN 120
Query: 473 VRFYKEEEKNEPEFAKKLASVADLYVNDAFGTAHRAHASTEGVTKFLRPSVAGFLMQKEL 652
VRFYKEEEKN+PEFAKKLA+VADLYVNDAFGTAHRAHASTEGVTKFL+P+VAGFLMQKEL
Sbjct: 121 VRFYKEEEKNDPEFAKKLAAVADLYVNDAFGTAHRAHASTEGVTKFLKPAVAGFLMQKEL 180
Query: 653 DYLVGAVANPKKPFAAIVGGSKVSSKIGVIESLLAKVDILILGGGMIFTFYKAQGLAVGK 832
DYLVGAVANPKKPFAAIVGGSKVS+KIGVIESLLAKVD+LILGGGMIFTFYKAQG AVGK
Sbjct: 181 DYLVGAVANPKKPFAAIVGGSKVSTKIGVIESLLAKVDVLILGGGMIFTFYKAQGYAVGK 240
Query: 833 SLVEEDKLELATSLIETAKSKGVKLLLPTDVVVADKFAADAESKIVPATAIPDGWMGLDV 1012
SLVEEDKLELATSLIE AK+KGV LLLPTDVVVADKFAADAESK V A+AIPDGWMGLDV
Sbjct: 241 SLVEEDKLELATSLIEKAKAKGVSLLLPTDVVVADKFAADAESKTVAASAIPDGWMGLDV 300
Query: 1013 GPDSIKTFAEALDTTKTVIWNGPMGVFEFEKFAAGTDAIAKQLAEL-TGKGVTTIIGGGD 1189
GPD+IKT +EALDT T+IWNGPMGVFEFEKFAAGTDAIAK+LA+L T KG TTIIGGGD
Sbjct: 301 GPDAIKTSSEALDTCNTIIWNGPMGVFEFEKFAAGTDAIAKKLADLTTTKGATTIIGGGD 360
Query: 1190 SVAAVEKAGLADKMSHISTGGGASLELLEGKPLPGVLALDEA 1315
SVAAVEKAGLADKMSHISTGGGASLELLEGK LPGVLALDEA
Sbjct: 361 SVAAVEKAGLADKMSHISTGGGASLELLEGKTLPGVLALDEA 402
9630.m00671|protein phosphoglycerate kinase
Length = 402
Score = 721 bits (1841), Expect = 0.0
Identities = 367/401 (91%), Positives = 389/401 (96%), Gaps = 1/401 (0%)
Frame = +2
Query: 113 MATKRSVGTLGEADLKGKKVFVRADLNVPLDDAQKITDDTRIRASIPTIKYLLEKGAKVI 292
MATKRSVGTLGEADL+GKKVFVRADLNVPLDDAQKITDDTRIRAS+PT+K+LLEKGAKVI
Sbjct: 1 MATKRSVGTLGEADLRGKKVFVRADLNVPLDDAQKITDDTRIRASVPTVKFLLEKGAKVI 60
Query: 293 LASHLGRPKGVTPKFSLKPLVPRLSELLGLEVVMAPDCIGQEVEKLAAALPDGGVLLLEN 472
LASHLGRPKGVTPK+SLKPLVPRLSELLG++VVMA DCIG+EVEKLAAALP+GGVLLLEN
Sbjct: 61 LASHLGRPKGVTPKYSLKPLVPRLSELLGVDVVMANDCIGEEVEKLAAALPEGGVLLLEN 120
Query: 473 VRFYKEEEKNEPEFAKKLASVADLYVNDAFGTAHRAHASTEGVTKFLRPSVAGFLMQKEL 652
VRFYKEEEKN+PEFAKKLA+VADLYVNDAFGTAHRAHASTEGVTKFL+P+VAGFLMQKEL
Sbjct: 121 VRFYKEEEKNDPEFAKKLAAVADLYVNDAFGTAHRAHASTEGVTKFLKPAVAGFLMQKEL 180
Query: 653 DYLVGAVANPKKPFAAIVGGSKVSSKIGVIESLLAKVDILILGGGMIFTFYKAQGLAVGK 832
DYLVGAVANPKKPFAAIVGGSKVS+KIGVIESLLAKVD+LILGGGMIFTFYKAQG AVGK
Sbjct: 181 DYLVGAVANPKKPFAAIVGGSKVSTKIGVIESLLAKVDVLILGGGMIFTFYKAQGYAVGK 240
Query: 833 SLVEEDKLELATSLIETAKSKGVKLLLPTDVVVADKFAADAESKIVPATAIPDGWMGLDV 1012
SLVEEDKLELATSLIE AK+KGV LLLPTDVVVADKFAADAESK V A+AIPDGWMGLDV
Sbjct: 241 SLVEEDKLELATSLIEKAKAKGVSLLLPTDVVVADKFAADAESKTVAASAIPDGWMGLDV 300
Query: 1013 GPDSIKTFAEALDTTKTVIWNGPMGVFEFEKFAAGTDAIAKQLAEL-TGKGVTTIIGGGD 1189
GPD+IKT +EALDT T+IWNGPMGVFEFEKFAAGTDAIAK+LA+L T KG TTIIGGGD
Sbjct: 301 GPDAIKTSSEALDTCNTIIWNGPMGVFEFEKFAAGTDAIAKKLADLTTTKGATTIIGGGD 360
Query: 1190 SVAAVEKAGLADKMSHISTGGGASLELLEGKPLPGVLALDEA 1315
SVAAVEKAGLADKMSHISTGGGASLELLEGK LPGVLALDEA
Sbjct: 361 SVAAVEKAGLADKMSHISTGGGASLELLEGKTLPGVLALDEA 402
9633.m03904|protein phosphoglycerate kinase (EC 2.7.2.3) - spinach
(fragment)
Length = 487
Score = 656 bits (1675), Expect = 0.0
Identities = 324/398 (81%), Positives = 367/398 (91%)
Frame = +2
Query: 122 KRSVGTLGEADLKGKKVFVRADLNVPLDDAQKITDDTRIRASIPTIKYLLEKGAKVILAS 301
K+SVG L ADL+GK+VFVRADLNVPLDD Q ITDDTR+RA+IPTI+YL++ GAKVIL+S
Sbjct: 82 KKSVGDLTAADLEGKRVFVRADLNVPLDDNQNITDDTRVRAAIPTIQYLIKNGAKVILSS 141
Query: 302 HLGRPKGVTPKFSLKPLVPRLSELLGLEVVMAPDCIGQEVEKLAAALPDGGVLLLENVRF 481
HLGRPKGVTPKFSL PLVPRLSELLG++V A D IG +VEKL + LP+G VLLLENVRF
Sbjct: 142 HLGRPKGVTPKFSLAPLVPRLSELLGIQVTKAEDVIGPDVEKLVSELPNGSVLLLENVRF 201
Query: 482 YKEEEKNEPEFAKKLASVADLYVNDAFGTAHRAHASTEGVTKFLRPSVAGFLMQKELDYL 661
YKEEEKN+PEFAKKLAS+ADLYVNDAFGTAHRAHASTEGVTKFL+PSVAGFL+QKELDYL
Sbjct: 202 YKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYL 261
Query: 662 VGAVANPKKPFAAIVGGSKVSSKIGVIESLLAKVDILILGGGMIFTFYKAQGLAVGKSLV 841
VGAV++PK+PFAAIVGGSKVSSKIGVIESLL K DIL+LGGGMIFTFYKAQGL+VG SLV
Sbjct: 262 VGAVSSPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLV 321
Query: 842 EEDKLELATSLIETAKSKGVKLLLPTDVVVADKFAADAESKIVPATAIPDGWMGLDVGPD 1021
EEDKLELATSL+ AK KGV LLLP+DV++ADKFA DA S++VPA+AIPDGWMGLD+GPD
Sbjct: 322 EEDKLELATSLLAKAKEKGVSLLLPSDVIIADKFAPDANSQVVPASAIPDGWMGLDIGPD 381
Query: 1022 SIKTFAEALDTTKTVIWNGPMGVFEFEKFAAGTDAIAKQLAELTGKGVTTIIGGGDSVAA 1201
S+ +F+ L+TT+TVIWNGPMGVFEF+KFA GT+AIAK+LA+L+GKGVTTIIGGGDSVAA
Sbjct: 382 SVASFSSTLETTQTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAA 441
Query: 1202 VEKAGLADKMSHISTGGGASLELLEGKPLPGVLALDEA 1315
VEK G+AD MSHISTGGGASLELLEGK LPGV+ALDEA
Sbjct: 442 VEKVGVADVMSHISTGGGASLELLEGKELPGVIALDEA 479
9630.m00670|protein phosphoglycerate kinase
Length = 371
Score = 615 bits (1570), Expect = e-176
Identities = 308/337 (91%), Positives = 328/337 (96%)
Frame = +2
Query: 113 MATKRSVGTLGEADLKGKKVFVRADLNVPLDDAQKITDDTRIRASIPTIKYLLEKGAKVI 292
MATKRSVGTLGEADL+GKKVFVRADLNVPLDDAQKITDDTRIRAS+PT+K+LLEKGAKVI
Sbjct: 1 MATKRSVGTLGEADLRGKKVFVRADLNVPLDDAQKITDDTRIRASVPTVKFLLEKGAKVI 60
Query: 293 LASHLGRPKGVTPKFSLKPLVPRLSELLGLEVVMAPDCIGQEVEKLAAALPDGGVLLLEN 472
LASHLGRPKGVTPK+SLKPLVPRLSELLG++VVMA DCIG+EVEKLAAALP+GGVLLLEN
Sbjct: 61 LASHLGRPKGVTPKYSLKPLVPRLSELLGVDVVMANDCIGEEVEKLAAALPEGGVLLLEN 120
Query: 473 VRFYKEEEKNEPEFAKKLASVADLYVNDAFGTAHRAHASTEGVTKFLRPSVAGFLMQKEL 652
VRFYKEEEKN+PEFAKKLA+VADLYVNDAFGTAHRAHASTEGVTKFL+P+VAGFLMQKEL
Sbjct: 121 VRFYKEEEKNDPEFAKKLAAVADLYVNDAFGTAHRAHASTEGVTKFLKPAVAGFLMQKEL 180
Query: 653 DYLVGAVANPKKPFAAIVGGSKVSSKIGVIESLLAKVDILILGGGMIFTFYKAQGLAVGK 832
DYLVGAVANPKKPFAAIVGGSKVS+KIGVIESLLAKVD+LILGGGMIFTFYKAQG AVGK
Sbjct: 181 DYLVGAVANPKKPFAAIVGGSKVSTKIGVIESLLAKVDVLILGGGMIFTFYKAQGYAVGK 240
Query: 833 SLVEEDKLELATSLIETAKSKGVKLLLPTDVVVADKFAADAESKIVPATAIPDGWMGLDV 1012
SLVEEDKLELATSLIE AK+KGV LLLPTDVVVADKFAADAESK V A+AIPDGWMGLDV
Sbjct: 241 SLVEEDKLELATSLIEKAKAKGVSLLLPTDVVVADKFAADAESKTVAASAIPDGWMGLDV 300
Query: 1013 GPDSIKTFAEALDTTKTVIWNGPMGVFEFEKFAAGTD 1123
GPD+IKT +EALDT T+IWNGPMGVFEFEKFAAGTD
Sbjct: 301 GPDAIKTSSEALDTCNTIIWNGPMGVFEFEKFAAGTD 337
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107552228
Number of Sequences: 59712
Number of extensions: 3143736
Number of successful extensions: 20514
Number of sequences better than 1.0e-10: 14
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20500
Number of HSP's gapped (non-prelim): 9
length of query: 548
length of database: 26,991,925
effective HSP length: 52
effective length of query: 495
effective length of database: 23,886,901
effective search space: 11824015995
effective search space used: 11824015995
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG926 Members:69 3pri:Y 1e-116
P07369 Chlorophyll A-B binding protein 3C, chloroplast
precursor (LHCII type I CAB-3C) (LHCP)
(1014 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9629.m03990|protein Chlorophyll A-B binding protein, puta... 498 e-141
9629.m05067|protein Chlorophyll A-B binding protein, puta... 498 e-141
9637.m01516|protein chlorophyll a/b-binding protein I pre... 494 e-139
9631.m03807|protein chlorophyll a/b binding protein 411 e-114
9635.m03724|protein chlorophyll a-b binding protein of lh... 348 8e-96
9637.m00977|protein Chlorophyll A-B binding protein, puta... 219 9e-57
9639.m01284|protein chlorophyll a/b-binding protein CP26 ... 216 4e-56
9634.m02114|protein chlorophyll a/b-binding protein precu... 142 1e-33
9635.m03882|protein LHCI-680, photosystem I antenna prote... 138 1e-32
9630.m05194|protein light-harvesting complex protein [imp... 129 1e-29
9630.m00958|protein chlorophyll a/b-binding protein type ... 127 4e-29
9637.m02343|protein AY086461 PSI type II chlorophyll a/b-... 124 3e-28
9639.m01283|protein chlorophyll a/b-binding protein CP26 ... 119 9e-27
9635.m03689|protein probable chlorophyll a/b-binding prot... 115 2e-25
9632.m03624|protein chlorophyll a/b-binding apoprotein CP... 80 5e-15
9630.m00957|protein chlorophyll a/b-binding protein type ... 80 8e-15
9629.m03990|protein Chlorophyll A-B binding protein, putative
Length = 261
Score = 498 bits (1269), Expect = e-141
Identities = 239/266 (89%), Positives = 250/266 (93%)
Frame = +1
Query: 88 MAATTMSLSSPAFAGKVVKDLPSSSLFGEARVTMRKTAAKAKKVASSSPWYGSDRVLYLG 267
MAA TM+LSSPA AGK ++ +FGE R+TMRK+AAK K AS SPWYG+DRVLYLG
Sbjct: 1 MAAATMALSSPALAGKA-----AAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLG 55
Query: 268 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 447
PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLA
Sbjct: 56 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 115
Query: 448 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGG 627
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGG
Sbjct: 116 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGG 175
Query: 628 PLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGPL 807
PLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 176 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 235
Query: 808 ENLADHLADPVNNNAWAFATNFVPGK 885
ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 236 ENLADHLADPVNNNAWAYATNFVPGK 261
9629.m05067|protein Chlorophyll A-B binding protein, putative
Length = 265
Score = 498 bits (1268), Expect = e-141
Identities = 241/266 (90%), Positives = 254/266 (94%), Gaps = 2/266 (0%)
Frame = +1
Query: 88 MAATTMSLSSPA-FAGKVVKDLPSSSLFGEARVTMRKTAAKAKKVASS-SPWYGSDRVLY 261
MAA+TM+LSSPA AGK V + + +FGE RVTMRK+AAK K A+S SPWYG+DRVLY
Sbjct: 1 MAASTMALSSPAALAGKAVAN---AKVFGEGRVTMRKSAAKPKPAAASGSPWYGADRVLY 57
Query: 262 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 441
LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 58 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117
Query: 442 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 621
LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIW CQVVLMGAVEGYR+A
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWGCQVVLMGAVEGYRVA 177
Query: 622 GGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKG 801
GGPLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 802 PLENLADHLADPVNNNAWAFATNFVPGK 885
PLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAYATNFVPGK 265
9637.m01516|protein chlorophyll a/b-binding protein I precursor -
rice
Length = 265
Score = 494 bits (1258), Expect = e-139
Identities = 241/266 (90%), Positives = 250/266 (93%), Gaps = 1/266 (0%)
Frame = +1
Query: 88 MAATTMSLSSPAFAGKVVKDLPSSSLFGEARVTMRKTAAKAKKVASS-SPWYGSDRVLYL 264
MAA TM+LSSP A SS+LFGEAR+TMRKTAAK K ASS SPWYG+DRVLYL
Sbjct: 1 MAAATMALSSPVMARAAPST--SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYL 58
Query: 265 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 444
GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 59 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 118
Query: 445 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 624
ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 119 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 178
Query: 625 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGP 804
GPLGE+VDPLYPGG+FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 179 GPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 805 LENLADHLADPVNNNAWAFATNFVPGK 885
LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 239 LENLADHLADPVNNNAWAYATNFVPGK 265
9631.m03807|protein chlorophyll a/b binding protein
Length = 263
Score = 411 bits (1045), Expect = e-114
Identities = 194/236 (82%), Positives = 212/236 (89%)
Frame = +1
Query: 178 RVTMRKTAAKAKKVASSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 357
R+TMR+T K A S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 32 RITMRRTV----KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87
Query: 358 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 537
TFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP
Sbjct: 88 TFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 147
Query: 538 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAEL 717
+LVHAQSILAIWA QVVLMG VEGYR+ GGPLGE +D +YPGG+FDPLGLADDP+ FAEL
Sbjct: 148 NLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAEL 207
Query: 718 KVKEVKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 885
KVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 208 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
9635.m03724|protein chlorophyll a-b binding protein of lhcii type
iii, chloroplastprecursor (cab)
Length = 266
Score = 348 bits (884), Expect = 8e-96
Identities = 181/270 (67%), Positives = 201/270 (74%), Gaps = 2/270 (0%)
Frame = +1
Query: 73 PPSTTMAATTMSLSSPAFAGKVVKDLPSSSLFGEARVTMRKTAAKAKKVASSSPWYGSDR 252
P S +AA T L P + V+D+ +++ R+TM K WYG DR
Sbjct: 8 PTSRVLAAKTPFLGHPRPSNAPVRDIAAAAT---GRITMSKEL-----------WYGPDR 53
Query: 253 VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF 432
V YLGP S + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+
Sbjct: 54 VKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCIT 113
Query: 433 PELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG 609
PE+L + V F E VWFKAG+QIFS+GGLDYLGNP+LVHAQSILA+ QVVLMG VEG
Sbjct: 114 PEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEG 173
Query: 610 YRIAGGPLGEIVDPLYPGGS-FDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAI 786
YRI G P + LYPGG FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAI
Sbjct: 174 YRINGLPGVGDGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAI 233
Query: 787 VTGKGPLENLADHLADPVNNNAWAFATNFVPG 882
VTGKGPLENL DHLADPV NNAW +AT F PG
Sbjct: 234 VTGKGPLENLLDHLADPVANNAWVYATKFTPG 265
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70628728
Number of Sequences: 59712
Number of extensions: 2119095
Number of successful extensions: 9525
Number of sequences better than 1.0e-10: 32
Number of HSP's better than 0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 9469
Number of HSP's gapped (non-prelim): 20
length of query: 338
length of database: 26,991,925
effective HSP length: 51
effective length of query: 286
effective length of database: 23,946,613
effective search space: 6848731318
effective search space used: 6848731318
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG949 Members:15 3pri:Y 1e-125
AAB18209.1 chlorophyll a/b-binding protein WCAB precursor
[Triticum aestivum]
(1151 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9629.m05067|protein Chlorophyll A-B binding protein, puta... 487 e-137
9629.m03990|protein Chlorophyll A-B binding protein, puta... 485 e-137
9637.m01516|protein chlorophyll a/b-binding protein I pre... 480 e-135
9631.m03807|protein chlorophyll a/b binding protein 410 e-114
9635.m03724|protein chlorophyll a-b binding protein of lh... 338 1e-92
9637.m00977|protein Chlorophyll A-B binding protein, puta... 217 2e-56
9639.m01284|protein chlorophyll a/b-binding protein CP26 ... 214 2e-55
9634.m02114|protein chlorophyll a/b-binding protein precu... 139 8e-33
9635.m03882|protein LHCI-680, photosystem I antenna prote... 137 3e-32
9630.m05194|protein light-harvesting complex protein [imp... 129 7e-30
9630.m00958|protein chlorophyll a/b-binding protein type ... 125 1e-28
9637.m02343|protein AY086461 PSI type II chlorophyll a/b-... 122 1e-27
9639.m01283|protein chlorophyll a/b-binding protein CP26 ... 118 1e-26
9635.m03689|protein probable chlorophyll a/b-binding prot... 115 2e-25
9636.m03389|protein chlorophyll a/b-binding protein presu... 108 2e-23
9632.m03624|protein chlorophyll a/b-binding apoprotein CP... 82 2e-15
9630.m00957|protein chlorophyll a/b-binding protein type ... 80 6e-15
9629.m05067|protein Chlorophyll A-B binding protein, putative
Length = 265
Score = 487 bits (1240), Expect = e-137
Identities = 236/266 (88%), Positives = 250/266 (93%), Gaps = 2/266 (0%)
Frame = -1
Query: 1112 MAATTTSLSS-STFAGKAVKNVPLSTLFGEARVTMRKTTAKAKQVSSS-SPWYGADRVLY 939
MAA+T +LSS + AGKAV N + +FGE RVTMRK+ AK K ++S SPWYGADRVLY
Sbjct: 1 MAASTMALSSPAALAGKAVAN---AKVFGEGRVTMRKSAAKPKPAAASGSPWYGADRVLY 57
Query: 938 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGSIFPEL 759
LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG +FPEL
Sbjct: 58 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117
Query: 758 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 579
LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIW CQVVLMGAVEGYR+A
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWGCQVVLMGAVEGYRVA 177
Query: 578 GGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 399
GGPLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 398 PLENLADHIVDPVNNNAWAFATNFVPGK 315
PLENLADH+ DPVNNNAWA+ATNFVPGK
Sbjct: 238 PLENLADHLADPVNNNAWAYATNFVPGK 265
9629.m03990|protein Chlorophyll A-B binding protein, putative
Length = 261
Score = 485 bits (1235), Expect = e-137
Identities = 234/266 (87%), Positives = 243/266 (90%)
Frame = -1
Query: 1112 MAATTTSLSSSTFAGKAVKNVPLSTLFGEARVTMRKTTAKAKQVSSSSPWYGADRVLYLG 933
MAA T +LSS AGKA V FGE R+TMRK+ AK K +S SPWYGADRVLYLG
Sbjct: 1 MAAATMALSSPALAGKAAAKV-----FGEGRITMRKSAAKPKPAASGSPWYGADRVLYLG 55
Query: 932 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGSIFPELLA 753
PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG +FPELLA
Sbjct: 56 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 115
Query: 752 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGG 573
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGG
Sbjct: 116 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGG 175
Query: 572 PLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 393
PLGE+VDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 176 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 235
Query: 392 ENLADHIVDPVNNNAWAFATNFVPGK 315
ENLADH+ DPVNNNAWA+ATNFVPGK
Sbjct: 236 ENLADHLADPVNNNAWAYATNFVPGK 261
9637.m01516|protein chlorophyll a/b-binding protein I precursor -
rice
Length = 265
Score = 480 bits (1222), Expect = e-135
Identities = 235/266 (88%), Positives = 244/266 (91%), Gaps = 1/266 (0%)
Frame = -1
Query: 1112 MAATTTSLSSSTFAGKAVKNVPLSTLFGEARVTMRKTTAKAKQVSSS-SPWYGADRVLYL 936
MAA T +LSS A A S LFGEAR+TMRKT AK K +SS SPWYGADRVLYL
Sbjct: 1 MAAATMALSSPVMARAAPSTS--SALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYL 58
Query: 935 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGSIFPELL 756
GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG +FPELL
Sbjct: 59 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 118
Query: 755 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 576
ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 119 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 178
Query: 575 GPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 396
GPLGE+VDPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 179 GPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 395 LENLADHIVDPVNNNAWAFATNFVPGK 315
LENLADH+ DPVNNNAWA+ATNFVPGK
Sbjct: 239 LENLADHLADPVNNNAWAYATNFVPGK 265
9631.m03807|protein chlorophyll a/b binding protein
Length = 263
Score = 410 bits (1042), Expect = e-114
Identities = 200/266 (75%), Positives = 225/266 (84%), Gaps = 2/266 (0%)
Frame = -1
Query: 1112 MAATTTSLSSSTFAGKAVKNVPLSTLFGEA--RVTMRKTTAKAKQVSSSSPWYGADRVLY 939
MAA+ ++S F G A + L G++ R+TMR+T A Q S WYG DR Y
Sbjct: 1 MAASALHQTTS-FLGTAPRRDELVRRVGDSGGRITMRRTVKSAPQ----SIWYGPDRPKY 55
Query: 938 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGSIFPEL 759
LGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALG +FPE+
Sbjct: 56 LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEI 115
Query: 758 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 579
L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYR+
Sbjct: 116 LSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVG 175
Query: 578 GGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 399
GGPLGE +D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 176 GGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235
Query: 398 PLENLADHIVDPVNNNAWAFATNFVPGK 315
P+ENL DH+ DPV NNAWA+ATNFVPGK
Sbjct: 236 PIENLFDHVADPVANNAWAYATNFVPGK 263
9635.m03724|protein chlorophyll a-b binding protein of lhcii type
iii, chloroplastprecursor (cab)
Length = 266
Score = 338 bits (858), Expect = 1e-92
Identities = 182/268 (67%), Positives = 200/268 (73%), Gaps = 6/268 (2%)
Frame = -1
Query: 1121 SSTMAATTTSLSSST-FAGKA-VKNVPLSTLFGEA--RVTMRKTTAKAKQVSSSSPWYGA 954
S+ MA T+ L++ T F G N P+ + A R+TM K WYG
Sbjct: 3 STIMAPTSRVLAAKTPFLGHPRPSNAPVRDIAAAATGRITMSKEL-----------WYGP 51
Query: 953 DRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGS 774
DRV YLGP S + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALG
Sbjct: 52 DRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGC 111
Query: 773 IFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 597
I PE+L + V F E VWFKAG+QIFS+GGLDYLGNP+LVHAQSILA+ QVVLMG V
Sbjct: 112 ITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLV 171
Query: 596 EGYRIAGGPLGEIVDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 420
EGYRI G P + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQ
Sbjct: 172 EGYRINGLPGVGDGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQ 231
Query: 419 AIVTGKGPLENLADHIVDPVNNNAWAFATNFVPG 318
AIVTGKGPLENL DH+ DPV NNAW +AT F PG
Sbjct: 232 AIVTGKGPLENLLDHLADPVANNAWVYATKFTPG 265
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73550337
Number of Sequences: 59712
Number of extensions: 2039986
Number of successful extensions: 8763
Number of sequences better than 1.0e-10: 34
Number of HSP's better than 0.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 8708
Number of HSP's gapped (non-prelim): 23
length of query: 383
length of database: 26,991,925
effective HSP length: 51
effective length of query: 332
effective length of database: 23,946,613
effective search space: 7950275516
effective search space used: 7950275516
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG953 Members:12 3pri:Y 3e-73
BAC10375.1 PsbQ domain protein family, putative-like protein
[Oryza sativa (japonica cultivar-group)]
(859 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9635.m00050|protein Oxygen evolving enhancer protein 3 (P... 289 4e-78
9635.m00050|protein Oxygen evolving enhancer protein 3 (PsbQ)
Length = 222
Score = 289 bits (732), Expect = 4e-78
Identities = 152/225 (67%), Positives = 173/225 (76%), Gaps = 3/225 (1%)
Frame = -2
Query: 813 STYLSSFQAAAAATSGGASTRPRPRPRPRVVT-CHTFEPSGRRSACLSLGLGLATAAVFH 637
+TYL S AA S RP PR +V C T GRRSACLS+GL A A +F
Sbjct: 2 ATYLQSAGLTAATASTSRLLRPTPRRLLLLVAACST---GGRRSACLSVGLAAAAATIFQ 58
Query: 636 TTPARATADGDEEPEPANNGWWLTEFPLPVPKIRNKEINNGETGTRSFVKNGIYMADIGP 457
PA A D EPANNGWWLTEFPLPVPKI NKE+NNGETG+R+FV+NGIY+ADIGP
Sbjct: 59 HHPACAATDD----EPANNGWWLTEFPLPVPKIVNKELNNGETGSRTFVRNGIYIADIGP 114
Query: 456 SFAAHAYRVRSSAFDLLALEDLLGKEA--SNYVNKYLRLKATFIYYDFDKLITAADPDAK 283
S+AAHAYR+RS+AFDLLALEDLLG A +NYV KYLRLK+TF+Y+DFDKLI+AA D +
Sbjct: 115 SYAAHAYRLRSTAFDLLALEDLLGNNADRANYVTKYLRLKSTFMYFDFDKLISAASDDQR 174
Query: 282 PPLLDLANRLFDSFEKLQAAVTTKDDTDIGSCYADTKLILQEVMTRMA 139
PPLLDLA RLFDSFE+LQ A TKDDT IGS YADTK+ILQEVM +MA
Sbjct: 175 PPLLDLATRLFDSFERLQKACGTKDDTQIGSSYADTKIILQEVMAKMA 222
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64234103
Number of Sequences: 59712
Number of extensions: 2191923
Number of successful extensions: 27849
Number of sequences better than 1.0e-10: 2
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27845
Number of HSP's gapped (non-prelim): 1
length of query: 286
length of database: 26,991,925
effective HSP length: 50
effective length of query: 235
effective length of database: 24,006,325
effective search space: 5641486375
effective search space used: 5641486375
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG970 Members:2 3pri:Y 5e-13
AAK63895.1 Putative proline-rich protein [Oryza sativa]
dbj|BAC11865.1| proline-rich protein 2 [Oryza sativa (japonica cu
(705 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9638.m00512|protein expressed protein 128 9e-30
9638.m00510|protein expressed protein 127 3e-29
9638.m00513|protein Similar to proline-rich protein 125 6e-29
9638.m00511|protein expressed protein 124 1e-28
9638.m00508|protein expressed protein 115 9e-26
9638.m00492|protein expressed protein 90 5e-18
9638.m00495|protein expressed protein 89 1e-17
9638.m00499|protein proline-rich protein, putative 88 1e-17
9638.m00501|protein proline-rich protein, putative 88 1e-17
9638.m00497|protein proline-rich protein, putative 87 4e-17
9638.m00488|protein expressed protein 80 3e-15
9638.m00506|protein expressed protein 78 2e-14
9631.m01353|protein expressed protein 74 3e-13
9631.m01354|protein expressed protein 67 3e-11
9638.m00512|protein expressed protein
Length = 229
Score = 128 bits (319), Expect = 9e-30
Identities = 75/109 (68%), Positives = 86/109 (78%), Gaps = 34/109 (31%)
Frame = +3
Query: 6 ADCVAQLHSAASNTPCXGQEPSKIVPVSEGTTFGIVAGDKAATPSAASPECASMTLCGPI 185
+DC+AQLHSA +N PC GQEPSKIVP+SEGT F +AG K PSA CAS T+CGPI
Sbjct: 91 SDCIAQLHSA-NNEPCPGQEPSKIVPMSEGT-FVAIAG-KTHYPSAL---CASATICGPI 144
Query: 186 KKHIMEHFHHKKPVPPKPEPKPQ---------------------------------PHPD 266
KK I++HF HKKPVPPKPEPKP+ P P+
Sbjct: 145 KKKIIDHF-HKKPVPPKPEPKPEPPKPKPEPEHPFLDHIHKKEKHFFDHFHKKPVPPKPE 203
Query: 267 YGPVPKPEPKPQPHPDYH-PVPP 332
P PKPEPKPQP P+YH P PP
Sbjct: 204 PKPEPKPEPKPQPAPEYHNPSPP 226
9638.m00510|protein expressed protein
Length = 224
Score = 127 bits (315), Expect = 3e-29
Identities = 75/109 (68%), Positives = 87/109 (79%), Gaps = 30/109 (27%)
Frame = +3
Query: 6 ADCVAQLHSAASNTPCXGQEPSKIVPVSEGTTFGIVAGDKAATPSAASPECASMTLCGPI 185
+DC+AQLHSA +N PC GQEPSKIVP+SEGT F VAG K SA CAS+T+CGPI
Sbjct: 91 SDCIAQLHSA-TNEPCPGQEPSKIVPMSEGT-FAAVAG-KTHYRSAL---CASVTICGPI 144
Query: 186 KKHIMEHFHHKKPVPPKPEPKPQ-----PHPDY------------------------GPV 278
KK I++HFH KKPVPPKPEPKP+ P P++ P
Sbjct: 145 KKKIIDHFH-KKPVPPKPEPKPEPPKPKPEPEHPFLDHIHKKEKHFFDHFHKKPVPPKPE 203
Query: 279 PKPEPKPQPHPDYH-PVPP 332
PKPEPKPQP P+YH P PP
Sbjct: 204 PKPEPKPQPAPEYHNPSPP 222
9638.m00513|protein Similar to proline-rich protein
Length = 229
Score = 125 bits (312), Expect = 6e-29
Identities = 75/109 (68%), Positives = 85/109 (77%), Gaps = 34/109 (31%)
Frame = +3
Query: 6 ADCVAQLHSAASNTPCXGQEPSKIVPVSEGTTFGIVAGDKAATPSAASPECASMTLCGPI 185
+DCVAQLH A +N PC GQEPSKIVP+SEGT F VAG + PSA CAS T+CGPI
Sbjct: 91 SDCVAQLHGA-TNEPCPGQEPSKIVPMSEGT-FIAVAG-QTHYPSAL---CASATICGPI 144
Query: 186 KKHIMEHFHHKKPVPPKPEPKPQ---------------------------------PHPD 266
KK I++HF HKKPVPPKPEPKP+ P P+
Sbjct: 145 KKKIIDHF-HKKPVPPKPEPKPEPPKPKPEPEHPFLDHIHKKEKHFFDHFHKKPVPPKPE 203
Query: 267 YGPVPKPEPKPQPHPDYH-PVPP 332
P PKPEPKPQP P+YH P PP
Sbjct: 204 PKPEPKPEPKPQPAPEYHNPSPP 226
9638.m00511|protein expressed protein
Length = 229
Score = 124 bits (309), Expect = 1e-28
Identities = 73/109 (66%), Positives = 86/109 (77%), Gaps = 34/109 (31%)
Frame = +3
Query: 6 ADCVAQLHSAASNTPCXGQEPSKIVPVSEGTTFGIVAGDKAATPSAASPECASMTLCGPI 185
+DC+AQLHSA +N PC GQEPSKIVP+SEGT F VAG K + PSA CAS T+CGPI
Sbjct: 91 SDCIAQLHSA-TNEPCPGQEPSKIVPLSEGT-FVTVAG-KTSYPSAL---CASATICGPI 144
Query: 186 KKHIMEHFHHKKPVPPKPEPKPQ---------------------------------PHPD 266
KK I++HF HKKPVPPKP+PKP+ P P+
Sbjct: 145 KKKIIDHF-HKKPVPPKPDPKPEPPKPKPEPEHPILDHFHKKEKDFFDHFHKKPVPPKPE 203
Query: 267 YGPVPKPEPKPQPHPDYH-PVPP 332
PKP+PKPQP P+YH P PP
Sbjct: 204 PKSEPKPQPKPQPAPEYHNPSPP 226
9638.m00508|protein expressed protein
Length = 196
Score = 115 bits (285), Expect = 9e-26
Identities = 60/107 (56%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Frame = +3
Query: 3 GADCVAQLHSAA-SNTPCXGQEPSKIVPVSEGTTFGIVAGDKAATPSAASPECASMTLCG 179
GADCVAQLHSAA +N C GQEPS+++ +SE TF VAG SP CAS T+C
Sbjct: 88 GADCVAQLHSAAHNNAACPGQEPSRVMQLSE-RTFVAVAGKT----HYVSPVCASATICE 142
Query: 180 PIKKHIMEHFHHKKPVP--PKPEPKPQPHPDYGPVPKPEPKPQPHPDYHP 323
PIKKH +HFHH KP P P +P P+PHPD P PKP P YHP
Sbjct: 143 PIKKHFFDHFHHNKPAPAAPSTKPAPKPHPDQPPHPKPTPTYGTPSPYHP 192
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52923971
Number of Sequences: 59712
Number of extensions: 1944438
Number of successful extensions: 45269
Number of sequences better than 1.0e-10: 28
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 45059
Number of HSP's gapped (non-prelim): 50
length of query: 235
length of database: 26,991,925
effective HSP length: 50
effective length of query: 184
effective length of database: 24,006,325
effective search space: 4417163800
effective search space used: 4417163800
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 157 (65.6 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG975 Members:6 3pri:Y 5e-45
CAB65536.1 proline-rich protein [Zea mays]
(993 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9638.m00510|protein expressed protein 239 7e-63
9638.m00512|protein expressed protein 238 1e-62
9638.m00513|protein Similar to proline-rich protein 236 6e-62
9638.m00511|protein expressed protein 235 1e-61
9638.m00508|protein expressed protein 219 9e-57
9638.m00499|protein proline-rich protein, putative 189 5e-48
9638.m00501|protein proline-rich protein, putative 189 9e-48
9638.m00495|protein expressed protein 188 2e-47
9638.m00488|protein expressed protein 181 2e-45
9638.m00492|protein expressed protein 178 2e-44
9638.m00506|protein expressed protein 177 3e-44
9638.m00504|protein Putative proline-rich protein 162 7e-40
9631.m01353|protein expressed protein 157 2e-38
9638.m00497|protein proline-rich protein, putative 152 1e-36
9631.m01354|protein expressed protein 120 4e-27
9638.m00510|protein expressed protein
Length = 224
Score = 239 bits (603), Expect = 7e-63
Identities = 137/193 (70%), Positives = 155/193 (79%), Gaps = 34/193 (17%)
Frame = -2
Query: 941 ATRALVL----GVLLAIAVANAEATSVVVGLAKCADCTRKNIKAEETFNGLQVAIKCKNI 774
A R LVL VL+A+AV EA SVVVG AKCADCTRKN+KAE+ F LQVAIKCKN
Sbjct: 4 APRGLVLLGVCAVLMAVAVGG-EAASVVVGTAKCADCTRKNMKAEDAFKNLQVAIKCKNG 62
Query: 773 DGQYESKAVGALDTTGAFSVPLATDLHGADCVAQLHSAASNTPCPGQEPSKIVPVSEGTT 594
+G+YESKA G LD TGAFSVPL DLH +DC+AQLHSA +N PCPGQEPSKIVP+SEGT
Sbjct: 63 NGEYESKATGKLDGTGAFSVPLDADLHSSDCIAQLHSA-TNEPCPGQEPSKIVPMSEGT- 120
Query: 593 FGIVAGDKTATPSAASPECASMTLCGPIKKHIMEHFHHKKPVPPKPEPKPQ-----PHPD 429
F VAG KT SA CAS+T+CGPIKK I++HFH KKPVPPKPEPKP+ P P+
Sbjct: 121 FAAVAG-KTHYRSAL---CASVTICGPIKKKIIDHFH-KKPVPPKPEPKPEPPKPKPEPE 175
Query: 428 Y------------------------GPVPKPEPKPQPHPDYH-PVPP 363
+ P PKPEPKPQP P+YH P PP
Sbjct: 176 HPFLDHIHKKEKHFFDHFHKKPVPPKPEPKPEPKPQPAPEYHNPSPP 222
9638.m00512|protein expressed protein
Length = 229
Score = 238 bits (601), Expect = 1e-62
Identities = 136/193 (70%), Positives = 153/193 (78%), Gaps = 38/193 (19%)
Frame = -2
Query: 941 ATRALVL----GVLLAIAVANAEATSVVVGLAKCADCTRKNIKAEETFNGLQVAIKCKNI 774
A R LVL VL+A+AV EA SVVVG AKCADCTRKN+KAE+ F LQVAIKCKN
Sbjct: 4 APRGLVLLGVCAVLMAVAVGG-EAASVVVGTAKCADCTRKNMKAEDAFKNLQVAIKCKNT 62
Query: 773 DGQYESKAVGALDTTGAFSVPLATDLHGADCVAQLHSAASNTPCPGQEPSKIVPVSEGTT 594
+G+YESKA G LD TGAFSVPL DL +DC+AQLHSA +N PCPGQEPSKIVP+SEGT
Sbjct: 63 NGEYESKAAGKLDGTGAFSVPLDADLDSSDCIAQLHSA-NNEPCPGQEPSKIVPMSEGT- 120
Query: 593 FGIVAGDKTATPSAASPECASMTLCGPIKKHIMEHFHHKKPVPPKPEPKPQP-------- 438
F +AG KT PSA CAS T+CGPIKK I++HFH KKPVPPKPEPKP+P
Sbjct: 121 FVAIAG-KTHYPSAL---CASATICGPIKKKIIDHFH-KKPVPPKPEPKPEPPKPKPEPE 175
Query: 437 -------------------------HPDYGPVPKPEPKPQPHPDYH-PVPP 363
P+ P PKPEPKPQP P+YH P PP
Sbjct: 176 HPFLDHIHKKEKHFFDHFHKKPVPPKPEPKPEPKPEPKPQPAPEYHNPSPP 226
9638.m00513|protein Similar to proline-rich protein
Length = 229
Score = 236 bits (595), Expect = 6e-62
Identities = 135/193 (69%), Positives = 152/193 (77%), Gaps = 38/193 (19%)
Frame = -2
Query: 941 ATRALVL----GVLLAIAVANAEATSVVVGLAKCADCTRKNIKAEETFNGLQVAIKCKNI 774
A R LVL VL+A+AV EA SVVVG AKCADCTRKN+KAE+ F LQVAIKCKN
Sbjct: 4 APRGLVLLGVCAVLMAVAVGG-EAASVVVGTAKCADCTRKNMKAEDAFKNLQVAIKCKNG 62
Query: 773 DGQYESKAVGALDTTGAFSVPLATDLHGADCVAQLHSAASNTPCPGQEPSKIVPVSEGTT 594
+G+YESKA G LD TG FS+PL DLH +DCVAQLH A +N PCPGQEPSKIVP+SEGT
Sbjct: 63 NGEYESKATGKLDGTGVFSIPLDADLHSSDCVAQLHGA-TNEPCPGQEPSKIVPMSEGT- 120
Query: 593 FGIVAGDKTATPSAASPECASMTLCGPIKKHIMEHFHHKKPVPPKPEPKPQP-------- 438
F VAG +T PSA CAS T+CGPIKK I++HFH KKPVPPKPEPKP+P
Sbjct: 121 FIAVAG-QTHYPSAL---CASATICGPIKKKIIDHFH-KKPVPPKPEPKPEPPKPKPEPE 175
Query: 437 -------------------------HPDYGPVPKPEPKPQPHPDYH-PVPP 363
P+ P PKPEPKPQP P+YH P PP
Sbjct: 176 HPFLDHIHKKEKHFFDHFHKKPVPPKPEPKPEPKPEPKPQPAPEYHNPSPP 226
9638.m00511|protein expressed protein
Length = 229
Score = 235 bits (593), Expect = 1e-61
Identities = 133/193 (68%), Positives = 155/193 (79%), Gaps = 38/193 (19%)
Frame = -2
Query: 941 ATRALVL----GVLLAIAVANAEATSVVVGLAKCADCTRKNIKAEETFNGLQVAIKCKNI 774
A R LVL VL+ +AV+ EA SVV+G AKCADCTRKN+KAE+ F LQVAIKCKN
Sbjct: 4 APRGLVLLGVCAVLMVLAVSG-EAASVVIGTAKCADCTRKNMKAEDAFKNLQVAIKCKNG 62
Query: 773 DGQYESKAVGALDTTGAFSVPLATDLHGADCVAQLHSAASNTPCPGQEPSKIVPVSEGTT 594
+G+YESKA G LD +GAFSVPL TDLH +DC+AQLHS A+N PCPGQEPSKIVP+SEG T
Sbjct: 63 NGEYESKAAGKLDGSGAFSVPLDTDLHSSDCIAQLHS-ATNEPCPGQEPSKIVPLSEG-T 120
Query: 593 FGIVAGDKTATPSAASPECASMTLCGPIKKHIMEHFHHKKPVPPKPEPKPQ--------- 441
F VAG KT+ PSA CAS T+CGPIKK I++HF HKKPVPPKP+PKP+
Sbjct: 121 FVTVAG-KTSYPSAL---CASATICGPIKKKIIDHF-HKKPVPPKPDPKPEPPKPKPEPE 175
Query: 440 ------------------------PHPDYGPVPKPEPKPQPHPDYH-PVPP 363
P P+ PKP+PKPQP P+YH P PP
Sbjct: 176 HPILDHFHKKEKDFFDHFHKKPVPPKPEPKSEPKPQPKPQPAPEYHNPSPP 226
9638.m00508|protein expressed protein
Length = 196
Score = 219 bits (551), Expect = 9e-57
Identities = 117/191 (61%), Positives = 133/191 (69%), Gaps = 4/191 (2%)
Frame = -2
Query: 944 AATRALVLGVLLAIAVANAEATSVVVGLAKCADCTRKNIKAEETFNGLQVAIKCKN-IDG 768
AA R L L +L A+ EA SVVVGLAKC DCTRKN+KA+ F GL+VAIKCKN DG
Sbjct: 3 AAGRVLALLAVLMAVAAHGEAASVVVGLAKCGDCTRKNMKAKAAFKGLRVAIKCKNGADG 62
Query: 767 QYESKAVGALDTTGAFSVPLATDLHGADCVAQLHSAA-SNTPCPGQEPSKIVPVSEGTTF 591
+YE+KA G LD GAF VPLA DL GADCVAQLHSAA +N CPGQEPS+++ +SE TF
Sbjct: 63 EYETKAAGKLDGAGAFRVPLAADLRGADCVAQLHSAAHNNAACPGQEPSRVMQLSE-RTF 121
Query: 590 GIVAGDKTATPSAASPECASMTLCGPIKKHIMEHFHHKKPVP--PKPEPKPQPHPDYGPV 417
VAG KT SP CAS T+C PIKKH +HFHH KP P P +P P+PHPD P
Sbjct: 122 VAVAG-KT---HYVSPVCASATICEPIKKHFFDHFHHNKPAPAAPSTKPAPKPHPDQPPH 177
Query: 416 PKPEPKPQPHPDYHP 372
PKP P YHP
Sbjct: 178 PKPTPTYGTPSPYHP 192
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74440686
Number of Sequences: 59712
Number of extensions: 2838438
Number of successful extensions: 73758
Number of sequences better than 1.0e-10: 30
Number of HSP's better than 0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 73500
Number of HSP's gapped (non-prelim): 66
length of query: 331
length of database: 26,991,925
effective HSP length: 51
effective length of query: 279
effective length of database: 23,946,613
effective search space: 6681105027
effective search space used: 6681105027
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1075 Members:154 3pri:Y 2e-56
S57779 oleosin 2 - barley emb|CAA57995.1| low molecular
weight oleosin [Hordeum vulgare subsp. vulgare]
(911 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9632.m04449|protein oleosin 16 kda (ose701). [rice 233 5e-61
9637.m01283|protein expressed protein 142 7e-34
9633.m04712|protein protein F27J15.22 [imported] - Arabid... 93 8e-19
9631.m04795|protein oleosin 90 7e-18
9634.m02662|protein hypothetical protein 69 1e-11
9632.m04449|protein oleosin 16 kda (ose701). [rice
Length = 224
Score = 233 bits (587), Expect = 5e-61
Identities = 127/159 (79%), Positives = 135/159 (84%)
Frame = +1
Query: 73 MAAEHHRDRGVLGGGGAFADRSGQGGYGGDHHDQQKQPAMMCALKAATAATAAGSLLVLS 252
MA +H RGV+GGGG + DR GQ Q+KQ MM ALK TAATA GS+LVLS
Sbjct: 77 MADQH---RGVIGGGG-YGDRGGQ-------EQQEKQRFMMTALKTVTAATAGGSMLVLS 125
Query: 253 GLILAGTVIALTVATPVLVIFSPVLVPAAIALALMSAGFVTSGGLGVAALSVFSWMYKYL 432
GLILAGTVIALTVATPVLVIFSPVLVPAAIALALM+AGFVTSGGLGVAALSVFSWMYKYL
Sbjct: 126 GLILAGTVIALTVATPVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSVFSWMYKYL 185
Query: 433 TGKHPPGADQLDHAKARLASKARDIKDAAQTRIDQAQGA 549
TGKHPPGADQLDHAKARLASKARDIK+AAQ RIDQAQ +
Sbjct: 186 TGKHPPGADQLDHAKARLASKARDIKEAAQHRIDQAQAS 224
9637.m01283|protein expressed protein
Length = 158
Score = 142 bits (355), Expect = 7e-34
Identities = 78/145 (53%), Positives = 104/145 (70%), Gaps = 10/145 (6%)
Frame = +1
Query: 109 GGGGAFADR-----SGQGGYGGDHHDQQKQP-AMMCALKAATAATAAGSLLVLSGLILAG 270
GGGGA + G GYG D Q++P A + K A AA AAGS+L L+GL G
Sbjct: 3 GGGGAVGEHYMRVIRGDDGYGDDGGQHQEKPGAAVSVAKGAAAAAAAGSMLALAGLTATG 62
Query: 271 TVIALTVATPVLVIFSPVLVPAAIALALMSAGFVTSGGLGVAALSVFSWMYKYL---TGK 441
T +AL VATP+LV+FSPVLVPAA A +L++AG +SG LG AA+ V +WMY+YL +G+
Sbjct: 63 TALALIVATPLLVLFSPVLVPAAFAASLLAAGLASSGALGAAAVGVLAWMYRYLQSPSGE 122
Query: 442 H-PPGADQLDHAKARLASKARDIKDAAQTRIDQAQ 543
H P GA +++HA+A L +KA D+ D Q R+DQA+
Sbjct: 123 HAPAGAGKVEHARALLDAKAHDVGDWVQHRLDQAR 157
9633.m04712|protein protein F27J15.22 [imported] - Arabidopsis
thaliana, putative
Length = 173
Score = 92.8 bits (227), Expect = 8e-19
Identities = 42/103 (40%), Positives = 70/103 (67%)
Frame = +1
Query: 214 TAATAAGSLLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMSAGFVTSGGLGV 393
T A + LL+L+GL L G V+AL P+ ++ SP+ VP A+AL +++A +++ V
Sbjct: 54 TLAVSGAVLLLLTGLTLTGAVVALIFLGPIALLTSPIWVPVAVALFVLAAAALSACAFVV 113
Query: 394 AALSVFSWMYKYLTGKHPPGADQLDHAKARLASKARDIKDAAQ 522
A++ +WMY+Y TG+HP GAD++D+A++R+A A +KD A+
Sbjct: 114 VAVAAGTWMYRYFTGRHPVGADRVDYARSRIADTASHVKDYAR 156
9631.m04795|protein oleosin
Length = 172
Score = 89.7 bits (219), Expect = 7e-18
Identities = 61/138 (44%), Positives = 77/138 (55%), Gaps = 17/138 (12%)
Frame = +1
Query: 127 ADRSGQGGYGGDHHDQ----------QKQPAMMCALKAATAATAAGSLLVLSGLILAGTV 276
ADR G Y Q +K P+ AL AT G LLVLSGL LA +V
Sbjct: 2 ADRDRAGQYYQQQRGQVGETVKGILPEKAPSASQALTVATLFPLGGLLLVLSGLALAASV 61
Query: 277 IALTVATPVLVIFSPVLVPAAIALALMSAGFVTSGGLGVAALSVFSWMYKYLTGKHPPGA 456
+ L VATPV +IFSPVLVPAA+ + L AGF+TSG LG+ LS +++
Sbjct: 62 VGLAVATPVFLIFSPVLVPAALLIGLAVAGFLTSGALGLGGLSSLTFLANTARQAFQRTP 121
Query: 457 DQLDHAKARLAS-------KARDIKDAAQTRIDQA 540
D ++ A+ R+A K A Q R DQA
Sbjct: 122 DYVEQARRRMAEAAAHAGHKTAQAGHAIQGRADQA 156
9634.m02662|protein hypothetical protein
Length = 157
Score = 68.7 bits (165), Expect = 1e-11
Identities = 43/101 (42%), Positives = 57/101 (55%), Gaps = 6/101 (5%)
Frame = +1
Query: 199 ALKAATAATAAGS-LLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMSAGFVT 375
AL AA G+ LLV +G +L T+ L +A P LV+FSPVL PAA A + +AG +
Sbjct: 35 ALAAAALLVPLGAALLVSAGAVLLATLAGLALAAPPLVLFSPVLAPAAAAAVMAAAGLLA 94
Query: 376 SGGLGVAALSVFSWMYKYL-----TGKHPPGADQLDHAKARLASKAR 501
+G LGVA +S +W Y+ G G D A AR +AR
Sbjct: 95 AGALGVAGVSALAWTVGYIRRGGARGSGGGGVAGDDRAAARRREEAR 141
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67074850
Number of Sequences: 59712
Number of extensions: 2312833
Number of successful extensions: 29578
Number of sequences better than 1.0e-10: 10
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29569
Number of HSP's gapped (non-prelim): 6
length of query: 303
length of database: 26,991,925
effective HSP length: 51
effective length of query: 252
effective length of database: 23,946,613
effective search space: 6034546476
effective search space used: 6034546476
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1149 Members:3 3pri:N 2e-43
BAB67889.1 putative histone H2B [Oryza sativa (japonica
cultivar-group)] dbj|BAB93209.1| putative histone H2B [Oryza sati
(626 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9636.m03857|protein histone H2B 253 2e-67
9631.m01675|protein histone H2B 252 3e-67
9631.m01674|protein histone H2B 252 3e-67
9629.m06140|protein histone H2B 247 1e-65
9633.m04685|protein histone H2B 247 2e-65
9629.m00489|protein histone H2B 245 4e-65
9629.m00525|protein histone H2B 245 5e-65
9629.m00521|protein histone H2B 245 5e-65
9629.m00527|protein histone H2B 244 9e-65
9629.m00487|protein histone H2B 244 9e-65
9629.m00523|protein Core histone H2A/H2B/H3/H4, putative 243 2e-64
9629.m00516|protein histone H2B 239 3e-63
9633.m03580|protein histone H2B 159 3e-39
9629.m02962|protein Similar to histone H2B 149 5e-36
9637.m03406|protein probable histone H2B - chicken (fragm... 113 3e-25
9636.m03856|protein histone H2B-1 98 1e-20
9636.m03857|protein histone H2B
Length = 150
Score = 253 bits (639), Expect = 2e-67
Identities = 132/149 (88%), Positives = 137/149 (91%), Gaps = 1/149 (0%)
Frame = +1
Query: 61 MAPKAEKKPAEKKPAAEEKAEKAPKGEKKPKAEKRLPAAK-EGGGGGSDKKAKKKAKKSV 237
MAPKAEKKPAEKKPA E+ EKAP KKPKAEKRLPA+K E GG G ++ +KKAKKSV
Sbjct: 1 MAPKAEKKPAEKKPAEEKAGEKAPAAGKKPKAEKRLPASKGEKGGEGKKERGRKKAKKSV 60
Query: 238 ETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAAKLARYNKKPTITSREI 417
ETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLA EAAKLARYNKKPTITSREI
Sbjct: 61 ETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSREI 120
Query: 418 QTSVRLVLPGELAKHAVSEGTKAVTKFTSS 507
QTSVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTSVRLVLPGELAKHAVSEGTKAVTKFTSS 150
9631.m01675|protein histone H2B
Length = 152
Score = 252 bits (638), Expect = 3e-67
Identities = 135/149 (90%), Positives = 140/149 (93%), Gaps = 4/149 (2%)
Frame = +1
Query: 61 MAPKAEKKPAEKKPAA--EEKAEKAPKGEKKPKAEKRLPAAKEGG--GGGSDKKAKKKAK 228
MAPKAEKKPAEKKPAA E+ AEKAP G KKPKAEKRLPA+K GG DKK +KKAK
Sbjct: 1 MAPKAEKKPAEKKPAAGEEKSAEKAPAG-KKPKAEKRLPASKASSKEGGAGDKKGRKKAK 59
Query: 229 KSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAAKLARYNKKPTITS 408
KSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAA+LARYNKKPTITS
Sbjct: 60 KSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITS 119
Query: 409 REIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 507
REIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 120 REIQTSVRLVLPGELAKHAVSEGTKAVTKFTSN 152
9631.m01674|protein histone H2B
Length = 152
Score = 252 bits (638), Expect = 3e-67
Identities = 135/149 (90%), Positives = 140/149 (93%), Gaps = 4/149 (2%)
Frame = +1
Query: 61 MAPKAEKKPAEKKPAA--EEKAEKAPKGEKKPKAEKRLPAAKEGG--GGGSDKKAKKKAK 228
MAPKAEKKPAEKKPAA E+ AEKAP G KKPKAEKRLPA+K GG DKK +KKAK
Sbjct: 1 MAPKAEKKPAEKKPAAGEEKSAEKAPAG-KKPKAEKRLPASKASSKEGGAGDKKGRKKAK 59
Query: 229 KSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAAKLARYNKKPTITS 408
KSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAA+LARYNKKPTITS
Sbjct: 60 KSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITS 119
Query: 409 REIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 507
REIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 120 REIQTSVRLVLPGELAKHAVSEGTKAVTKFTSN 152
9629.m06140|protein histone H2B
Length = 139
Score = 247 bits (624), Expect = 1e-65
Identities = 131/149 (87%), Positives = 134/149 (89%)
Frame = +1
Query: 61 MAPKAEKKPAEKKPAAEEKAEKAPKGEKKPKAEKRLPAAKEGGGGGSDKKAKKKAKKSVE 240
MAPKAEKKPAEKKP E K EKKPKAEKR+P AKEGGG +KK KKKAKKSVE
Sbjct: 1 MAPKAEKKPAEKKPVEE-------KAEKKPKAEKRVPGAKEGGG---EKKGKKKAKKSVE 50
Query: 241 TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAAKLARYNKKPTITSREIQ 420
TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAA+LARYNKKPTITSREIQ
Sbjct: 51 TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQ 110
Query: 421 TSVRLVLPGELAKHAVSEGTKAVTKFTSS 507
TSVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 111 TSVRLVLPGELAKHAVSEGTKAVTKFTSS 139
9633.m04685|protein histone H2B
Length = 152
Score = 247 bits (623), Expect = 2e-65
Identities = 134/149 (89%), Positives = 136/149 (90%), Gaps = 3/149 (2%)
Frame = +1
Query: 61 MAPKAEKKPAEKKPAAEEKA-EKAPKGEKKPKAEKRLPAAK-EGGGGGSDKKA-KKKAKK 231
MAPKAEKKPA KKPA EE A EKAP KKPKAEKRLPA K E GG G KKA +KK KK
Sbjct: 1 MAPKAEKKPAAKKPAEEEPAAEKAPAAGKKPKAEKRLPAGKGEKGGAGEGKKAGRKKGKK 60
Query: 232 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAAKLARYNKKPTITSR 411
SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLA EAAKLARYNKKPTITSR
Sbjct: 61 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 120
Query: 412 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 507
EIQTSVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 121 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 152
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47155110
Number of Sequences: 59712
Number of extensions: 1840593
Number of successful extensions: 94345
Number of sequences better than 1.0e-10: 32
Number of HSP's better than 0.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94225
Number of HSP's gapped (non-prelim): 46
length of query: 208
length of database: 26,991,925
effective HSP length: 49
effective length of query: 159
effective length of database: 24,066,037
effective search space: 3826499883
effective search space used: 3826499883
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 156 (65.2 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1178 Members:22 3pri:Y 1e-100
AAM47582.1 putative 60S ribosomal protein [Sorghum bicolor]
(921 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m05345|protein putative ribosomal protein L13a 403 e-112
9635.m00089|protein ribosomal protein L13, putative 369 e-102
9631.m05342|protein putative ribosomal protein L13a 241 1e-63
9639.m02099|protein retrotransposon protein, putative, un... 106 5e-23
9631.m05345|protein putative ribosomal protein L13a
Length = 206
Score = 403 bits (1025), Expect = e-112
Identities = 197/206 (95%), Positives = 202/206 (97%)
Frame = +1
Query: 58 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 237
MVSGSGVCA RVVVDARHHMLGRLASI+AKELLNGQRVVVVRCEEICMSGGLVRQKMKYL
Sbjct: 1 MVSGSGVCAPRVVVDARHHMLGRLASIIAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 60
Query: 238 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 417
RFLRKRMNTKPSHGPIHFR+PAKILWRT+RGMIPHKT RGEAALARLKAYEGVPPPYDRT
Sbjct: 61 RFLRKRMNTKPSHGPIHFRSPAKILWRTVRGMIPHKTKRGEAALARLKAYEGVPPPYDRT 120
Query: 418 KRMVIPDALKVLRLQPGHRYCLLGQLSKEVGWNYADTIRELEEKRKEKAKVSYDRRKQLA 597
KRMVIPDALKVLRLQPGH+YCLLGQLSKEVGWNY DTIRELEEKRKEKAKV+YDRRKQLA
Sbjct: 121 KRMVIPDALKVLRLQPGHKYCLLGQLSKEVGWNYYDTIRELEEKRKEKAKVAYDRRKQLA 180
Query: 598 KLRVKAEKAAEEKLGTQLEILAPIKY 675
KLRVKAEKAAEEKLG QLEILAPIKY
Sbjct: 181 KLRVKAEKAAEEKLGPQLEILAPIKY 206
9635.m00089|protein ribosomal protein L13, putative
Length = 238
Score = 369 bits (936), Expect = e-102
Identities = 182/206 (88%), Positives = 200/206 (96%), Gaps = 32/206 (15%)
Frame = +1
Query: 58 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 237
MVSGSG+C +RVVVDARHHMLGRLAS+VAKELLNGQRVVVVRCEE+C+SGGLVRQKMKYL
Sbjct: 1 MVSGSGLCTRRVVVDARHHMLGRLASLVAKELLNGQRVVVVRCEEMCISGGLVRQKMKYL 60
Query: 238 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 417
RFLRKRMNTKPSHGPIHFRAP++I WRT+RGMIPHKT RGEAALA LKA++GVPPPYDRT
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSRIFWRTVRGMIPHKTPRGEAALANLKAFDGVPPPYDRT 120
Query: 418 KRMVIPDALKVLRLQPGHRYCLLGQLSKEVGWNYADTIR--------------------- 534
KRMV+PDALKVLRLQPGH+YCLLGQLSKEVGWNY DTIR
Sbjct: 121 KRMVVPDALKVLRLQPGHKYCLLGQLSKEVGWNYHDTIRVEWDADSVTFPRDILGDIESL 180
Query: 535 -----------ELEEKRKEKAKVSYDRRKQLAKLRVKAEKAAEEKLGTQLEILAPIKY 675
ELEEKRKEKAKV+Y+RRKQL +LRVKAEKAAEEKLG+Q++ILAPIKY
Sbjct: 181 ICGTHMCLDPHELEEKRKEKAKVAYERRKQLTRLRVKAEKAAEEKLGSQIDILAPIKY 238
9631.m05342|protein putative ribosomal protein L13a
Length = 172
Score = 241 bits (609), Expect = 1e-63
Identities = 122/159 (76%), Positives = 127/159 (79%)
Frame = +1
Query: 58 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 237
MVSGSGVCA RVVVDARHHML RLASI+AKELLNG+RVV
Sbjct: 1 MVSGSGVCAPRVVVDARHHMLSRLASIIAKELLNGKRVV--------------------- 39
Query: 238 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 417
RMNTKPSHGPIHFR+PAKILWRT+RGMIPHKT RGEAALARLKAYE V PPYDRT
Sbjct: 40 -----RMNTKPSHGPIHFRSPAKILWRTVRGMIPHKTKRGEAALARLKAYEVVTPPYDRT 94
Query: 418 KRMVIPDALKVLRLQPGHRYCLLGQLSKEVGWNYADTIR 534
KRMVIPDALKVLRLQPGH+YCLLGQLSKEVGWNY DTIR
Sbjct: 95 KRMVIPDALKVLRLQPGHKYCLLGQLSKEVGWNYYDTIR 133
9639.m02099|protein retrotransposon protein, putative,
unclassified
Length = 512
Score = 106 bits (263), Expect = 5e-23
Identities = 50/51 (98%), Positives = 51/51 (99%)
Frame = +1
Query: 352 RGEAALARLKAYEGVPPPYDRTKRMVIPDALKVLRLQPGHRYCLLGQLSKE 504
RGEAALARLKAYEGVPPPYDRTKRMVIPDALKVLRLQPGH+YCLLGQLSKE
Sbjct: 9 RGEAALARLKAYEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGQLSKE 59
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68870314
Number of Sequences: 59712
Number of extensions: 2471728
Number of successful extensions: 27882
Number of sequences better than 1.0e-10: 8
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27875
Number of HSP's gapped (non-prelim): 6
length of query: 307
length of database: 26,991,925
effective HSP length: 51
effective length of query: 255
effective length of database: 23,946,613
effective search space: 6106386315
effective search space used: 6106386315
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1189 Members:24 3pri:Y 4e-51
BAC55749.1 P0456B03.14 [Oryza sativa (japonica cultivar-group)]
(1109 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9636.m03300|protein expressed protein 333 4e-91
9636.m03301|protein expressed protein 256 7e-68
9637.m01974|protein hypothetical protein 122 1e-27
9636.m03300|protein expressed protein
Length = 224
Score = 333 bits (844), Expect = 4e-91
Identities = 176/223 (78%), Positives = 193/223 (85%), Gaps = 4/223 (1%)
Frame = +3
Query: 30 MAESDAAAG--KMANGEASDDSGRAVEVSGGEDTLPAVLRSFVDGV--RPPPGDGGDPLL 197
M ESDAAA K NGEAS GR VEV EDTLP VLRSFVDGV + G GG+PLL
Sbjct: 1 MEESDAAAASAKAPNGEASGGGGRPVEV---EDTLPGVLRSFVDGVCSQGGGGGGGEPLL 57
Query: 198 QRLRAASCEAAPRLRDASRNSARDLLAWTKQGSGLRAILVISVGTITLISLTGLLIFMSF 377
+R+RAASCE APRLR+ASRNSARDLL WT++GSGLRAILVISVGTITLI+LTGLLIFM F
Sbjct: 58 RRIRAASCETAPRLREASRNSARDLLEWTRRGSGLRAILVISVGTITLIALTGLLIFMFF 117
Query: 378 LLVATANAIVVSVLMSLAAAGGFLALFFACLVAVYVGAVSIAIFVISTTVISAIVAAMIA 557
LLVAT NA+VVSVLMSLAAAGGFLA+FFACLVAVY+G VS+A+FVIS TVISAIV MIA
Sbjct: 118 LLVATTNAVVVSVLMSLAAAGGFLAMFFACLVAVYIGVVSVAVFVISATVISAIVGVMIA 177
Query: 558 TGWIGFFWTIWFAARKSLDLTKHSIGMTTSAVQSYSASRRVGQKPTD 698
TGW+GFFW IWFAARKS+DLTKHSIG+T SA+QSYSASR QKP D
Sbjct: 178 TGWLGFFWMIWFAARKSMDLTKHSIGVTNSAIQSYSASRHAKQKPID 224
9636.m03301|protein expressed protein
Length = 208
Score = 256 bits (646), Expect = 7e-68
Identities = 141/178 (79%), Positives = 154/178 (86%), Gaps = 4/178 (2%)
Frame = +3
Query: 30 MAESDAAAG--KMANGEASDDSGRAVEVSGGEDTLPAVLRSFVDGV--RPPPGDGGDPLL 197
M ESDAAA K NGEAS GR VEV EDTLP VLRSFVDGV + G GG+PLL
Sbjct: 1 MEESDAAAASAKAPNGEASGGGGRPVEV---EDTLPGVLRSFVDGVCSQGGGGGGGEPLL 57
Query: 198 QRLRAASCEAAPRLRDASRNSARDLLAWTKQGSGLRAILVISVGTITLISLTGLLIFMSF 377
+R+RAASCE APRLR+ASRNSARDLL WT++GSGLRAILVISVGTITLI+LTGLLIFM F
Sbjct: 58 RRIRAASCETAPRLREASRNSARDLLEWTRRGSGLRAILVISVGTITLIALTGLLIFMFF 117
Query: 378 LLVATANAIVVSVLMSLAAAGGFLALFFACLVAVYVGAVSIAIFVISTTVISAIVAAMIA 557
LLVAT NA+VVSVLMSLAAAGGFLA+FFACLVAVY+G VS+A+FVIS TVISAIV MIA
Sbjct: 118 LLVATTNAVVVSVLMSLAAAGGFLAMFFACLVAVYIGVVSVAVFVISATVISAIVGVMIA 177
Query: 558 TG 563
TG
Sbjct: 178 TG 179
9637.m01974|protein hypothetical protein
Length = 143
Score = 122 bits (303), Expect = 1e-27
Identities = 65/138 (47%), Positives = 87/138 (62%), Gaps = 1/138 (0%)
Frame = +3
Query: 204 LRAASCEAAPRL-RDASRNSARDLLAWTKQGSGLRAILVISVGTITLISLTGLLIFMSFL 380
LR +C RL RDA +AR L AWT++G RA+LV SVG++ L +LT LL+ L
Sbjct: 9 LRGCACADGGRLLRDACHGAARGLAAWTRRGGAARALLVASVGSVALAALTVLLVAAFVL 68
Query: 381 LVATANAIVVSVLMSLAAAGGFLALFFACLVAVYVGAVSIAIFVISTTVISAIVAAMIAT 560
+ A +A V+ ++SLAA LA+ YVGA+S+A+FV++ T + +VA IAT
Sbjct: 69 VAAATSAAAVAAVVSLAALSALLAV-------AYVGALSVAVFVVAATTAATVVAITIAT 121
Query: 561 GWIGFFWTIWFAARKSLDL 617
GW FW IWFAARK LDL
Sbjct: 122 GWAALFWIIWFAARKCLDL 140
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75189440
Number of Sequences: 59712
Number of extensions: 2364019
Number of successful extensions: 34873
Number of sequences better than 1.0e-10: 6
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34865
Number of HSP's gapped (non-prelim): 5
length of query: 369
length of database: 26,991,925
effective HSP length: 51
effective length of query: 318
effective length of database: 23,946,613
effective search space: 7615022934
effective search space used: 7615022934
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1192 Members:79 3pri:Y 1e-126
Q40677 Fructose-bisphosphate aldolase, chloroplast
precursor (ALDP) pir||T03679 probable fructose-bisphosphate aldola
(1606 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9639.m00637|protein Fructose-bisphosphate aldolase class-I 720 0.0
9639.m00638|protein Fructose-bisphosphate aldolase class-I 657 0.0
9629.m00200|protein Fructose-bisphosphate aldolase class-... 538 e-152
9629.m06736|protein Fructose-bisphosphate aldolase class-I 381 e-105
9636.m00174|protein Fructose-bisphosphate aldolase class-I 381 e-105
9634.m03902|protein Fructose-bisphosphate aldolase class-I 380 e-105
9633.m03072|protein Fructose-bisphosphate aldolase class-I 374 e-103
9640.m00648|protein Fructose-bisphosphate aldolase class-I 260 2e-80
9629.m05120|protein retrotransposon protein, putative, Ty... 73 1e-12
9639.m04036|protein transposon protein, putative, CACTA, ... 72 2e-12
9629.m00408|protein expressed protein 68 4e-11
9637.m00098|protein Similar to aldolase 68 6e-11
9636.m00525|protein dna-directed rna polymerase ii larges... 67 8e-11
9639.m00637|protein Fructose-bisphosphate aldolase class-I
Length = 388
Score = 720 bits (1838), Expect = 0.0
Identities = 358/385 (92%), Positives = 371/385 (95%), Gaps = 3/385 (0%)
Frame = +2
Query: 158 MASATLLKSSFLPKKAEWGVARQVAAPR---VSMVVRAGAYDDELVKTAKTIASPGRGIL 328
MASATLLKSSFLPKK+EWG RQ AAP+ VSMVVRAGAYDDELVKTAKTIASPGRGIL
Sbjct: 1 MASATLLKSSFLPKKSEWGATRQAAAPKPVTVSMVVRAGAYDDELVKTAKTIASPGRGIL 60
Query: 329 AMDESNATCGKRLDSIGLENTEANRQAFRTLLVSVPGLGNHISGAILFEETLYQSTVDGK 508
AMDESNATCGKRL SIGLENTEANRQA+RTLLV+ PGLG +ISGAILFEETLYQSTVDGK
Sbjct: 61 AMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGK 120
Query: 509 KIVDILAEQGIVPGIKVDKGLVPLTGSNDESWCQGLDGLASREAAYYQQGARFAKWRTVV 688
KIVDIL EQ IVPGIKVDKGLVPL GSN+ESWCQGLDGLASREAAYYQQGARFAKWRTVV
Sbjct: 121 KIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVV 180
Query: 689 SIPNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIGRTFEVAQKVWAET 868
SIPNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGI RTFEVAQKVWAET
Sbjct: 181 SIPNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAET 240
Query: 869 FYQMSQNNVMFEGILLKPSMVTPGAECKDRATPEQVADYTLKLLSRRVPPAVPGIMFLSG 1048
F+ M++NNVMFEGILLKPSMVTPGAECKDRATPEQV+DYTLKLL RR+PPAVPGIMFLSG
Sbjct: 241 FFYMAENNVMFEGILLKPSMVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSG 300
Query: 1049 GQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQEALLLRAKAN 1228
GQSEVEAT NLNAMNQGPNPWHVSFSYARALQNTCLKTWGG+PENVKAAQ+ALLLRAKAN
Sbjct: 301 GQSEVEATQNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKAN 360
Query: 1229 SLAQLGKYTSDGEAAEAKEGMFVKNYSY 1312
SLAQLGKYTSDGEAAEAKEGMFVKNY Y
Sbjct: 361 SLAQLGKYTSDGEAAEAKEGMFVKNYVY 388
9639.m00638|protein Fructose-bisphosphate aldolase class-I
Length = 363
Score = 657 bits (1676), Expect = 0.0
Identities = 333/385 (86%), Positives = 346/385 (89%), Gaps = 3/385 (0%)
Frame = +2
Query: 158 MASATLLKSSFLPKKAEWGVARQVAAPR---VSMVVRAGAYDDELVKTAKTIASPGRGIL 328
MASATLLKSSFLPKK+EWG RQ AAP+ VSMVVRAGAYDDELVKTAKTIASPGRGIL
Sbjct: 1 MASATLLKSSFLPKKSEWGATRQAAAPKPVTVSMVVRAGAYDDELVKTAKTIASPGRGIL 60
Query: 329 AMDESNATCGKRLDSIGLENTEANRQAFRTLLVSVPGLGNHISGAILFEETLYQSTVDGK 508
AMDESNATCGKRL SIGLENTEANRQA+RTLLV+ PGLG +ISGAILFEETLYQSTVDGK
Sbjct: 61 AMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGK 120
Query: 509 KIVDILAEQGIVPGIKVDKGLVPLTGSNDESWCQGLDGLASREAAYYQQGARFAKWRTVV 688
KIVDIL EQ IVPGIKVDKGLVPL GSN+ESWCQGLDGLASREAAYYQQGARFAKWRTVV
Sbjct: 121 KIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVV 180
Query: 689 SIPNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIGRTFEVAQKVWAET 868
SIPNGPSELA PEILLDGEHGI RTFEVAQKVWAET
Sbjct: 181 SIPNGPSELA-------------------------PEILLDGEHGIDRTFEVAQKVWAET 215
Query: 869 FYQMSQNNVMFEGILLKPSMVTPGAECKDRATPEQVADYTLKLLSRRVPPAVPGIMFLSG 1048
F+ M++NNVMFEGILLKPSMVTPGAECKDRATPEQV+DYTLKLL RR+PPAVPGIMFLSG
Sbjct: 216 FFYMAENNVMFEGILLKPSMVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSG 275
Query: 1049 GQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQEALLLRAKAN 1228
GQSEVEAT NLNAMNQGPNPWHVSFSYARALQNTCLKTWGG+PENVKAAQ+ALLLRAKAN
Sbjct: 276 GQSEVEATQNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKAN 335
Query: 1229 SLAQLGKYTSDGEAAEAKEGMFVKNYSY 1312
SLAQLGKYTSDGEAAEAKEGMFVKNY Y
Sbjct: 336 SLAQLGKYTSDGEAAEAKEGMFVKNYVY 363
9629.m00200|protein Fructose-bisphosphate aldolase class-I, putative
Length = 1613
Score = 538 bits (1371), Expect = e-152
Identities = 274/366 (74%), Positives = 309/366 (83%), Gaps = 4/366 (1%)
Frame = +2
Query: 194 PKKAEW--GVARQVAAPRVSMVVRAGA--YDDELVKTAKTIASPGRGILAMDESNATCGK 361
P W G R+ A PR + V+RA A Y DELV TAK++ASPGRGILA+DESNATCGK
Sbjct: 12 PAATTWLPGGGRRSAPPRRATVIRAAAVSYADELVSTAKSVASPGRGILAIDESNATCGK 71
Query: 362 RLDSIGLENTEANRQAFRTLLVSVPGLGNHISGAILFEETLYQSTVDGKKIVDILAEQGI 541
RL SIGL+NTE NRQA+R LL++ GLG +ISGAILFEETLYQST DGKK VD L +Q I
Sbjct: 72 RLASIGLDNTEVNRQAYRQLLLTTAGLGEYISGAILFEETLYQSTTDGKKFVDCLKDQNI 131
Query: 542 VPGIKVDKGLVPLTGSNDESWCQGLDGLASREAAYYQQGARFAKWRTVVSIPNGPSELAV 721
+PGIKVDKGLVPL GSN+ESWCQGLDGLASR RTVVSIP GPS LAV
Sbjct: 132 MPGIKVDKGLVPLPGSNNESWCQGLDGLASR--------------RTVVSIPCGPSALAV 177
Query: 722 KEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIGRTFEVAQKVWAETFYQMSQNNVMF 901
KEAAWGLARYAAI+QDNGLVPIVEPEILLDG+H I RT EVA+KVW+E F+ ++QNNV+F
Sbjct: 178 KEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHAIERTLEVAEKVWSEVFFYLAQNNVLF 237
Query: 902 EGILLKPSMVTPGAECKDRATPEQVADYTLKLLSRRVPPAVPGIMFLSGGQSEVEATLNL 1081
EGILLKPSMVTPGAE K +ATPE +A +TL +L RRVPPAVPGIMFLSGGQSEVEATLNL
Sbjct: 238 EGILLKPSMVTPGAEHKQKATPEAIAKHTLTMLRRRVPPAVPGIMFLSGGQSEVEATLNL 297
Query: 1082 NAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQEALLLRAKANSLAQLGKYTSD 1261
NAMNQ PNPWHVSFSYARALQN+ LKTW GRPENV+AAQ+ALL+RAKANSLAQLG+YT +
Sbjct: 298 NAMNQEPNPWHVSFSYARALQNSVLKTWQGRPENVEAAQKALLVRAKANSLAQLGRYTGE 357
Query: 1262 GEAAEAKEGM 1291
GE+ EAK+G+
Sbjct: 358 GESDEAKKGI 367
9629.m06736|protein Fructose-bisphosphate aldolase class-I
Length = 358
Score = 381 bits (969), Expect = e-105
Identities = 200/355 (56%), Positives = 249/355 (69%), Gaps = 4/355 (1%)
Frame = +2
Query: 248 MVVRAGAYDDELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLV 427
M G Y DEL+K A I +PG+GILA DES T GKR SI +EN E NR++ R LL
Sbjct: 1 MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLF 60
Query: 428 SVPGLGNHISGAILFEETLYQSTVDGKKIVDILAEQGIVPGIKVDKGLVPLTGSNDESWC 607
+ PG H+SG ILFEETLYQ T DGK VD+L E G++PGIKVDKG V + G+N E+
Sbjct: 61 TTPGALQHLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTVEVAGTNKETTT 120
Query: 608 QGLDGLASREAAYYQQGARFAKWRTVVSI-PNGPSELAVKEAAWGLARYAAISQDNGLVP 784
QG D L R A YY+ GARFAKWR V+ I PN PS+L++ A GLARYA I Q+NGLVP
Sbjct: 121 QGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLSIDLNAQGLARYAIICQENGLVP 180
Query: 785 IVEPEILLDGEHGIGRTFEVAQKVWAETFYQMSQNNVMFEGILLKPSMVTPGAECKDRAT 964
IVEPEIL+DG H I R V +KV A + +++++V+ EG LLKP+MVTPG+E K + +
Sbjct: 181 IVEPEILVDGSHDIERCAYVTEKVLAACYKALNEHHVLLEGSLLKPNMVTPGSESK-KVS 239
Query: 965 PEQVADYTLKLLSRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ--GPNPWHVSFSYARA 1138
P+ +A+YT++ L R VP AVP I+FLSGGQSE EAT+NLNAMN+ PW +SFS+ RA
Sbjct: 240 PQLIAEYTVRALQRTVPAAVPAIVFLSGGQSEEEATVNLNAMNKLSTKKPWALSFSFGRA 299
Query: 1139 LQNTCLKTWGGRPENVKAAQEALLLRAKANSLAQLGKYTSDGEAAE-AKEGMFVKNYSY 1312
LQ + LK WGG+ ENV AQ+A + R KANS A LG Y D E A E + VK+Y Y
Sbjct: 300 LQQSTLKAWGGKTENVVKAQKAFITRCKANSEATLGTYQGDAVLGEGASESLHVKDYKY 358
9636.m00174|protein Fructose-bisphosphate aldolase class-I
Length = 362
Score = 381 bits (967), Expect = e-105
Identities = 206/355 (58%), Positives = 249/355 (70%), Gaps = 8/355 (2%)
Frame = +2
Query: 248 MVVRAGAYDDELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLV 427
M G Y DEL++ A I +PG+GILA DES T GKRL SIG+EN E NR+A R LL
Sbjct: 1 MSAYCGKYKDELIRNAAYIGTPGKGILAADESTGTIGKRLASIGVENVEENRRALRELLF 60
Query: 428 SVPGLGNHISGAILFEETLYQSTVDGKKIVDILAEQGIVPGIKVDKGLVPLTGSNDESWC 607
+ PG + +SG ILFEETLYQST DG VD+LA G++ GIKVDKG V L G++ E+
Sbjct: 61 TAPGALDCLSGVILFEETLYQSTRDGTPFVDVLAAAGVLAGIKVDKGTVELAGTDRETTT 120
Query: 608 QGLDGLASREAAYYQQGARFAKWRTVVSI---PNGPSELAVKEAAWGLARYAAISQDNGL 778
QG DGL R YY GARFAKWR V+SI + PS+LAV A GLARYA I Q+NGL
Sbjct: 121 QGHDGLGERCRRYYAAGARFAKWRAVLSIGRASSRPSQLAVDANAQGLARYAIICQENGL 180
Query: 779 VPIVEPEILLDGEHGIGRTFEVAQKVWAETFYQMSQNNVMFEGILLKPSMVTPGAECKDR 958
VPIVEPEIL+DGEHGI EV ++V A + +S ++V+ EG LLKP+MVTPG++ R
Sbjct: 181 VPIVEPEILVDGEHGIEACAEVTERVLAACYKALSDHHVLLEGTLLKPNMVTPGSDAA-R 239
Query: 959 ATPEQVADYTLKLLSRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ----GPNPWHVSFS 1126
A PE VA++T++ L R VPPAVP I+FLSGGQSE EAT NLNAMNQ G PW ++FS
Sbjct: 240 APPEVVAEHTVRALLRTVPPAVPAIVFLSGGQSEEEATRNLNAMNQVASRGKKPWSLTFS 299
Query: 1127 YARALQNTCLKTWGGRPENVKAAQEALLLRAKANSLAQLGKYTSDGEAAE-AKEGMFVKN 1303
+ RALQ + LK W G+ ENV AQ ALL R +ANS A LG Y D A E E + VK+
Sbjct: 300 FGRALQQSTLKAWAGKAENVGKAQAALLARCRANSQATLGAYAGDAAAGEGVSENLHVKD 359
Query: 1304 YSY 1312
Y Y
Sbjct: 360 YKY 362
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117161087
Number of Sequences: 59712
Number of extensions: 4106008
Number of successful extensions: 58208
Number of sequences better than 1.0e-10: 26
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 57921
Number of HSP's gapped (non-prelim): 68
length of query: 535
length of database: 26,991,925
effective HSP length: 52
effective length of query: 482
effective length of database: 23,886,901
effective search space: 11513486282
effective search space used: 11513486282
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1198 Members:900 3pri:Y 1e-117
Q40677 Fructose-bisphosphate aldolase, chloroplast
precursor (ALDP) pir||T03679 probable fructose-bisphosphate aldola
(1622 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9639.m00637|protein Fructose-bisphosphate aldolase class-I 730 0.0
9639.m00638|protein Fructose-bisphosphate aldolase class-I 666 0.0
9629.m00200|protein Fructose-bisphosphate aldolase class-... 545 e-154
9634.m03902|protein Fructose-bisphosphate aldolase class-I 387 e-107
9629.m06736|protein Fructose-bisphosphate aldolase class-I 379 e-105
9636.m00174|protein Fructose-bisphosphate aldolase class-I 377 e-104
9633.m03072|protein Fructose-bisphosphate aldolase class-I 371 e-102
9640.m00648|protein Fructose-bisphosphate aldolase class-I 265 2e-70
9637.m00098|protein Similar to aldolase 69 3e-11
9639.m00637|protein Fructose-bisphosphate aldolase class-I
Length = 388
Score = 730 bits (1863), Expect = 0.0
Identities = 361/388 (93%), Positives = 373/388 (96%)
Frame = +1
Query: 88 MASATLLKSSFLPKKAEWGATRQAAAPKPMTVSMVVRASAYADELVKTAKTIASPGRGIL 267
MASATLLKSSFLPKK+EWGATRQAAAPKP+TVSMVVRA AY DELVKTAKTIASPGRGIL
Sbjct: 1 MASATLLKSSFLPKKSEWGATRQAAAPKPVTVSMVVRAGAYDDELVKTAKTIASPGRGIL 60
Query: 268 AMDESNATCGKRLASIGLENTEANRQAYRTLLVTPPGLGNYISGAILFEETLYQSTVDGK 447
AMDESNATCGKRLASIGLENTEANRQAYRTLLVT PGLG YISGAILFEETLYQSTVDGK
Sbjct: 61 AMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGK 120
Query: 448 KIVDILVEQGIVPGIKVDKGLVPLVGSNDESWCQGLDGLASREAAYYQQGARFAKWRTVV 627
KIVDIL EQ IVPGIKVDKGLVPL GSN+ESWCQGLDGLASREAAYYQQGARFAKWRTVV
Sbjct: 121 KIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVV 180
Query: 628 SIPNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEIMLDGEHGIERTFEVAQKVWAET 807
SIPNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEI+LDGEHGI+RTFEVAQKVWAET
Sbjct: 181 SIPNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAET 240
Query: 808 FYYMAQNNVMFEGILLKPSMVTPGAECKDRATPEEVASYTLKLLQRRIPPSVPGIMFLSG 987
F+YMA+NNVMFEGILLKPSMVTPGAECKDRATPE+V+ YTLKLL RRIPP+VPGIMFLSG
Sbjct: 241 FFYMAENNVMFEGILLKPSMVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSG 300
Query: 988 GQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVAAAQEALLLRAKAN 1167
GQSEVEAT NLNAMNQ PNPWHVSFSYARALQNTCLKTWGG+PENV AAQ+ALLLRAKAN
Sbjct: 301 GQSEVEATQNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKAN 360
Query: 1168 SLAQLGKYTSDGEAAAAKENMFVKNYSY 1251
SLAQLGKYTSDGEAA AKE MFVKNY Y
Sbjct: 361 SLAQLGKYTSDGEAAEAKEGMFVKNYVY 388
9639.m00638|protein Fructose-bisphosphate aldolase class-I
Length = 363
Score = 666 bits (1701), Expect = 0.0
Identities = 336/388 (86%), Positives = 348/388 (89%)
Frame = +1
Query: 88 MASATLLKSSFLPKKAEWGATRQAAAPKPMTVSMVVRASAYADELVKTAKTIASPGRGIL 267
MASATLLKSSFLPKK+EWGATRQAAAPKP+TVSMVVRA AY DELVKTAKTIASPGRGIL
Sbjct: 1 MASATLLKSSFLPKKSEWGATRQAAAPKPVTVSMVVRAGAYDDELVKTAKTIASPGRGIL 60
Query: 268 AMDESNATCGKRLASIGLENTEANRQAYRTLLVTPPGLGNYISGAILFEETLYQSTVDGK 447
AMDESNATCGKRLASIGLENTEANRQAYRTLLVT PGLG YISGAILFEETLYQSTVDGK
Sbjct: 61 AMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGK 120
Query: 448 KIVDILVEQGIVPGIKVDKGLVPLVGSNDESWCQGLDGLASREAAYYQQGARFAKWRTVV 627
KIVDIL EQ IVPGIKVDKGLVPL GSN+ESWCQGLDGLASREAAYYQQGARFAKWRTVV
Sbjct: 121 KIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVV 180
Query: 628 SIPNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEIMLDGEHGIERTFEVAQKVWAET 807
SIPNGPSELA PEI+LDGEHGI+RTFEVAQKVWAET
Sbjct: 181 SIPNGPSELA-------------------------PEILLDGEHGIDRTFEVAQKVWAET 215
Query: 808 FYYMAQNNVMFEGILLKPSMVTPGAECKDRATPEEVASYTLKLLQRRIPPSVPGIMFLSG 987
F+YMA+NNVMFEGILLKPSMVTPGAECKDRATPE+V+ YTLKLL RRIPP+VPGIMFLSG
Sbjct: 216 FFYMAENNVMFEGILLKPSMVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSG 275
Query: 988 GQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVAAAQEALLLRAKAN 1167
GQSEVEAT NLNAMNQ PNPWHVSFSYARALQNTCLKTWGG+PENV AAQ+ALLLRAKAN
Sbjct: 276 GQSEVEATQNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKAN 335
Query: 1168 SLAQLGKYTSDGEAAAAKENMFVKNYSY 1251
SLAQLGKYTSDGEAA AKE MFVKNY Y
Sbjct: 336 SLAQLGKYTSDGEAAEAKEGMFVKNYVY 363
9629.m00200|protein Fructose-bisphosphate aldolase class-I, putative
Length = 1613
Score = 545 bits (1388), Expect = e-154
Identities = 277/369 (75%), Positives = 313/369 (84%), Gaps = 4/369 (1%)
Frame = +1
Query: 124 PKKAEW--GATRQAAAPKPMTVSMVVRASA--YADELVKTAKTIASPGRGILAMDESNAT 291
P W G R++A P+ TV +RA+A YADELV TAK++ASPGRGILA+DESNAT
Sbjct: 12 PAATTWLPGGGRRSAPPRRATV---IRAAAVSYADELVSTAKSVASPGRGILAIDESNAT 68
Query: 292 CGKRLASIGLENTEANRQAYRTLLVTPPGLGNYISGAILFEETLYQSTVDGKKIVDILVE 471
CGKRLASIGL+NTE NRQAYR LL+T GLG YISGAILFEETLYQST DGKK VD L +
Sbjct: 69 CGKRLASIGLDNTEVNRQAYRQLLLTTAGLGEYISGAILFEETLYQSTTDGKKFVDCLKD 128
Query: 472 QGIVPGIKVDKGLVPLVGSNDESWCQGLDGLASREAAYYQQGARFAKWRTVVSIPNGPSE 651
Q I+PGIKVDKGLVPL GSN+ESWCQGLDGLASR RTVVSIP GPS
Sbjct: 129 QNIMPGIKVDKGLVPLPGSNNESWCQGLDGLASR--------------RTVVSIPCGPSA 174
Query: 652 LAVKEAAWGLARYAAISQDNGLVPIVEPEIMLDGEHGIERTFEVAQKVWAETFYYMAQNN 831
LAVKEAAWGLARYAAI+QDNGLVPIVEPEI+LDG+H IERT EVA+KVW+E F+Y+AQNN
Sbjct: 175 LAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHAIERTLEVAEKVWSEVFFYLAQNN 234
Query: 832 VMFEGILLKPSMVTPGAECKDRATPEEVASYTLKLLQRRIPPSVPGIMFLSGGQSEVEAT 1011
V+FEGILLKPSMVTPGAE K +ATPE +A +TL +L+RR+PP+VPGIMFLSGGQSEVEAT
Sbjct: 235 VLFEGILLKPSMVTPGAEHKQKATPEAIAKHTLTMLRRRVPPAVPGIMFLSGGQSEVEAT 294
Query: 1012 LNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVAAAQEALLLRAKANSLAQLGKY 1191
LNLNAMNQ PNPWHVSFSYARALQN+ LKTW GRPENV AAQ+ALL+RAKANSLAQLG+Y
Sbjct: 295 LNLNAMNQEPNPWHVSFSYARALQNSVLKTWQGRPENVEAAQKALLVRAKANSLAQLGRY 354
Query: 1192 TSDGEAAAAKENM 1230
T +GE+ AK+ +
Sbjct: 355 TGEGESDEAKKGI 367
9634.m03902|protein Fructose-bisphosphate aldolase class-I
Length = 358
Score = 387 bits (984), Expect = e-107
Identities = 203/348 (58%), Positives = 248/348 (70%), Gaps = 4/348 (1%)
Frame = +1
Query: 208 YADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTPPGLGN 387
YADEL+KTAK IA+PG+GILA DES T GKRLASI +EN E NRQA R LL T PG
Sbjct: 8 YADELIKTAKYIATPGKGILAADESTGTIGKRLASINVENVEPNRQALRELLFTTPGAFQ 67
Query: 388 YISGAILFEETLYQSTVDGKKIVDILVEQGIVPGIKVDKGLVPLVGSNDESWCQGLDGLA 567
Y+SG ILFEETLYQST G VD+L G+VPGIKVDKG V + G+N E+ QGLD L
Sbjct: 68 YLSGVILFEETLYQSTAAGTPFVDVLKAGGVVPGIKVDKGTVDIAGTNGETTTQGLDSLG 127
Query: 568 SREAAYYQQGARFAKWRTVVSI--PNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEI 741
+R A YY+ GARFAKWR V+ I PSELAVK+ A GLARYA I Q+NGLVPIVEPEI
Sbjct: 128 ARCAKYYEAGARFAKWRAVLKIGAAGEPSELAVKQNAEGLARYALICQENGLVPIVEPEI 187
Query: 742 MLDGEHGIERTFEVAQKVWAETFYYMAQNNVMFEGILLKPSMVTPGAECKDRATPEEVAS 921
+ DG H I+ V ++V A + + + V+ EG LLKP+MVTPG++ + E +
Sbjct: 188 LTDGAHDIKTCAAVTERVLAAVYKSLNDHKVLLEGTLLKPNMVTPGSD-SPKVGAEVIGE 246
Query: 922 YTLKLLQRRIPPSVPGIMFLSGGQSEVEATLNLNAMN--QAPNPWHVSFSYARALQNTCL 1095
YT+ L+R +PP+VPGI+FLSGGQSE EA+ NLNAMN + PW ++FS+ RALQ + +
Sbjct: 247 YTVAALRRTVPPAVPGIVFLSGGQSEEEASQNLNAMNKLEVLKPWTLTFSFGRALQQSTI 306
Query: 1096 KTWGGRPENVAAAQEALLLRAKANSLAQLGKYTSDGEAAAAKENMFVKNYSY 1251
K WGG+ ENVAAAQ A L R KANS A LGKY AA E+++VK Y+Y
Sbjct: 307 KKWGGKKENVAAAQAAFLARCKANSEATLGKYGGAAGDAATSESLYVKGYTY 358
9629.m06736|protein Fructose-bisphosphate aldolase class-I
Length = 358
Score = 379 bits (963), Expect = e-105
Identities = 197/348 (56%), Positives = 248/348 (70%), Gaps = 4/348 (1%)
Frame = +1
Query: 208 YADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTPPGLGN 387
Y DEL+K A I +PG+GILA DES T GKR ASI +EN E NR++ R LL T PG
Sbjct: 8 YKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFTTPGALQ 67
Query: 388 YISGAILFEETLYQSTVDGKKIVDILVEQGIVPGIKVDKGLVPLVGSNDESWCQGLDGLA 567
++SG ILFEETLYQ T DGK VD+L E G++PGIKVDKG V + G+N E+ QG D L
Sbjct: 68 HLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTVEVAGTNKETTTQGHDDLG 127
Query: 568 SREAAYYQQGARFAKWRTVVSI-PNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEIM 744
R A YY+ GARFAKWR V+ I PN PS+L++ A GLARYA I Q+NGLVPIVEPEI+
Sbjct: 128 KRCAKYYEAGARFAKWRAVLKIGPNEPSQLSIDLNAQGLARYAIICQENGLVPIVEPEIL 187
Query: 745 LDGEHGIERTFEVAQKVWAETFYYMAQNNVMFEGILLKPSMVTPGAECKDRATPEEVASY 924
+DG H IER V +KV A + + +++V+ EG LLKP+MVTPG+E K + +P+ +A Y
Sbjct: 188 VDGSHDIERCAYVTEKVLAACYKALNEHHVLLEGSLLKPNMVTPGSESK-KVSPQLIAEY 246
Query: 925 TLKLLQRRIPPSVPGIMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTCLK 1098
T++ LQR +P +VP I+FLSGGQSE EAT+NLNAMN+ PW +SFS+ RALQ + LK
Sbjct: 247 TVRALQRTVPAAVPAIVFLSGGQSEEEATVNLNAMNKLSTKKPWALSFSFGRALQQSTLK 306
Query: 1099 TWGGRPENVAAAQEALLLRAKANSLAQLGKYTSDGE-AAAAKENMFVKNYSY 1251
WGG+ ENV AQ+A + R KANS A LG Y D A E++ VK+Y Y
Sbjct: 307 AWGGKTENVVKAQKAFITRCKANSEATLGTYQGDAVLGEGASESLHVKDYKY 358
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110385187
Number of Sequences: 59712
Number of extensions: 3413756
Number of successful extensions: 24727
Number of sequences better than 1.0e-10: 18
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 24698
Number of HSP's gapped (non-prelim): 13
length of query: 540
length of database: 26,991,925
effective HSP length: 52
effective length of query: 488
effective length of database: 23,886,901
effective search space: 11656807688
effective search space used: 11656807688
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1204 Members:542 3pri:Y 1e-113
AAP87284.1 cytosolic heat shock protein 90 [Hordeum vulgare]
(2561 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9637.m02719|protein Similar to heat shock protein 82 1338 0.0
9636.m03953|protein Similar to heat shock protein 82 1335 0.0
9636.m03952|protein Similar to heat shock protein 82 1180 0.0
9632.m00078|protein Similar to heat shock protein HSP82 -... 1178 0.0
9634.m04916|protein Hsp90 protein, putative 640 0.0
9637.m02656|protein heat-shock protein, 82K, precursor - rye 609 e-174
9636.m03832|protein heat-shock protein, 82K, precursor - rye 605 e-173
9636.m03831|protein heat-shock protein, 82K, precursor - rye 605 e-173
9640.m03211|protein AC009176 putative heat-shock protein 598 e-170
9637.m03067|protein Similar to heat shock protein 90A 457 e-128
9637.m02719|protein Similar to heat shock protein 82
Length = 699
Score = 1338 bits (3426), Expect = 0.0
Identities = 663/700 (94%), Positives = 689/700 (97%)
Frame = +3
Query: 75 MATETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 254
MA+ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA
Sbjct: 1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 60
Query: 255 QPELFIHIIPDKATSTLTIVDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIG 434
QPELFIHI+PDKA++TL+I+DSG+GMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIG
Sbjct: 61 QPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIG 120
Query: 435 QFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKMVLYLK 614
QFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTK+ LYLK
Sbjct: 121 QFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLK 180
Query: 615 DDQMEYLEERRIKDLVKKHSEFISYPISLWTEKTTEKEISDDEDEEEKKDTEEGKVEDVD 794
DDQ+EYLEERR+KDLVKKHSEFISYPISLWTEKTTEKEISDDEDEEEKKD EEGKVEDVD
Sbjct: 181 DDQLEYLEERRLKDLVKKHSEFISYPISLWTEKTTEKEISDDEDEEEKKDAEEGKVEDVD 240
Query: 795 EEKEEKEKKKKKIKEVSHEWNLVNKQKPIWMRKPEEINKEEYAAFYKSLTNDWEEHLAVK 974
EEKEEKEKKKKKIKEVSHEWN++NKQKPIW+RKPEEI KEEYAAFYKSLTNDWEEHLAVK
Sbjct: 241 EEKEEKEKKKKKIKEVSHEWNVMNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVK 300
Query: 975 HFSVEGQLEFKAVLFVPKRAPFDLFDNKKKANNIKLYVRRVFIMDNCDELIPEYLSFVKG 1154
HFSVEGQLEFKA+LFVPKRAPFDLFD +KK NNIKLYVRRVFIMDNC+ELIPE+LSFVKG
Sbjct: 301 HFSVEGQLEFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKG 360
Query: 1155 IVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFFEIAENKEDYNKFYEAFSKNLKL 1334
IVDSEDLPLNISRE LQQNKILKVIRKNLVKKC+ELFFEIAENKEDYNKFYEAFSKNLKL
Sbjct: 361 IVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKL 420
Query: 1335 GIHEDSQNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQNEIYYITGESKKAVENSPF 1514
GIHEDS NRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQ+EIYYITGESKKAVENSPF
Sbjct: 421 GIHEDSTNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQSEIYYITGESKKAVENSPF 480
Query: 1515 LEKLKKKGYEVIYMVDAIDEYAIGQLKEFEGKKLVSATKEGLKLDESEDEKKKQEELKEK 1694
LEKLKKKGYEV+YMVDAIDEYA+GQLKEFEGKKLVSATKEGLKLDESEDEKK+QEELKEK
Sbjct: 481 LEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRQEELKEK 540
Query: 1695 FEGLCKVIKEVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGY 1874
FEGLCKVIKEVLGDKVEKV+VSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGY
Sbjct: 541 FEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGY 600
Query: 1875 MSSKKTMEINPENAIMDELRKRADADKNDKSVKDLVMLLFETSLLTSGFSLEDPNTFGTR 2054
MSSKKTMEINPEN+IMDELRKRADADKNDKSVKDLVMLLFET+LLTSGFSLEDPNTFGTR
Sbjct: 601 MSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTR 660
Query: 2055 IHRMLKLGLSIDEDDEAPENDTDMPPLEDDAGESKMEEVD 2174
IHRMLKLGLSIDED+ A E D DMPPLEDDAGESKMEEVD
Sbjct: 661 IHRMLKLGLSIDEDESA-EADADMPPLEDDAGESKMEEVD 699
9636.m03953|protein Similar to heat shock protein 82
Length = 699
Score = 1335 bits (3417), Expect = 0.0
Identities = 662/700 (94%), Positives = 689/700 (97%)
Frame = +3
Query: 75 MATETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 254
MA+ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA
Sbjct: 1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 60
Query: 255 QPELFIHIIPDKATSTLTIVDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIG 434
QPELFIHI+PDKA++TL+I+DSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIG
Sbjct: 61 QPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIG 120
Query: 435 QFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKMVLYLK 614
QFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTK+ LYLK
Sbjct: 121 QFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLK 180
Query: 615 DDQMEYLEERRIKDLVKKHSEFISYPISLWTEKTTEKEISDDEDEEEKKDTEEGKVEDVD 794
DDQ+EYLEERR+KDL+KKHSEFISYPISLWTEKTTEKEISDDEDEEEKKD EEGKVEDVD
Sbjct: 181 DDQLEYLEERRLKDLIKKHSEFISYPISLWTEKTTEKEISDDEDEEEKKDAEEGKVEDVD 240
Query: 795 EEKEEKEKKKKKIKEVSHEWNLVNKQKPIWMRKPEEINKEEYAAFYKSLTNDWEEHLAVK 974
EEKEEKEKKKKKIKEVSHEW+LVNKQKPIWMRKPEEI KEEYAAFYKSLTNDWEEHLAVK
Sbjct: 241 EEKEEKEKKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVK 300
Query: 975 HFSVEGQLEFKAVLFVPKRAPFDLFDNKKKANNIKLYVRRVFIMDNCDELIPEYLSFVKG 1154
HFSVEGQLEFKAVLFVPKRAPFDLFD +KK NNIKLYVRRVFIMDNC+ELIPE+LSFVKG
Sbjct: 301 HFSVEGQLEFKAVLFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKG 360
Query: 1155 IVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFFEIAENKEDYNKFYEAFSKNLKL 1334
IVDSEDLPLNISRE LQQNKILKVIRKNLVKKC+ELFFEIAENKEDYNKFYEAFSKNLKL
Sbjct: 361 IVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKL 420
Query: 1335 GIHEDSQNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQNEIYYITGESKKAVENSPF 1514
GIHEDS NR KIAELLRYHSTKSGDELTSLKDYVTRMKEGQN+IYYITGESKKAVENSPF
Sbjct: 421 GIHEDSTNRNKIAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPF 480
Query: 1515 LEKLKKKGYEVIYMVDAIDEYAIGQLKEFEGKKLVSATKEGLKLDESEDEKKKQEELKEK 1694
LEKLKKKGYEV+YMVDAIDEYA+GQLKEFEGKKLVSATKEGLKLDESEDEKK++EELKEK
Sbjct: 481 LEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRKEELKEK 540
Query: 1695 FEGLCKVIKEVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGY 1874
FEGLCKVIKEVLGDKVEKV+VSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGY
Sbjct: 541 FEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGY 600
Query: 1875 MSSKKTMEINPENAIMDELRKRADADKNDKSVKDLVMLLFETSLLTSGFSLEDPNTFGTR 2054
MSSKKTMEINPENAIM+ELRKRADADKNDKSVKDLV+LLFET+LLTSGFSL+DPNTFG+R
Sbjct: 601 MSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSR 660
Query: 2055 IHRMLKLGLSIDEDDEAPENDTDMPPLEDDAGESKMEEVD 2174
IHRMLKLGLSIDED+ A E DTDMPPLEDDAGESKMEEVD
Sbjct: 661 IHRMLKLGLSIDEDETA-EADTDMPPLEDDAGESKMEEVD 699
9636.m03952|protein Similar to heat shock protein 82
Length = 614
Score = 1180 bits (3019), Expect = 0.0
Identities = 583/615 (94%), Positives = 604/615 (97%)
Frame = +3
Query: 330 MTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDD 509
MTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDD
Sbjct: 1 MTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDD 60
Query: 510 EQYVWESQAGGSFTVTRDTSGEQLGRGTKMVLYLKDDQMEYLEERRIKDLVKKHSEFISY 689
EQYVWESQAGGSFTVTRDTSGEQLGRGTK+ LYLKDDQ+EYLEERR+KDL+KKHSEFISY
Sbjct: 61 EQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLIKKHSEFISY 120
Query: 690 PISLWTEKTTEKEISDDEDEEEKKDTEEGKVEDVDEEKEEKEKKKKKIKEVSHEWNLVNK 869
PISLWTEKTTEKEISDDEDEEEKKD EEGKVEDVDEEKEEKEKKKKKIKEVSHEW+LVNK
Sbjct: 121 PISLWTEKTTEKEISDDEDEEEKKDAEEGKVEDVDEEKEEKEKKKKKIKEVSHEWSLVNK 180
Query: 870 QKPIWMRKPEEINKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLF 1049
QKPIWMRKPEEI KEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLF
Sbjct: 181 QKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLF 240
Query: 1050 DNKKKANNIKLYVRRVFIMDNCDELIPEYLSFVKGIVDSEDLPLNISRETLQQNKILKVI 1229
D +KK NNIKLYVRRVFIMDNC+ELIPE+LSFVKGIVDSEDLPLNISRE LQQNKILKVI
Sbjct: 241 DTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVI 300
Query: 1230 RKNLVKKCIELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRTKIAELLRYHSTKSGD 1409
RKNLVKKC+ELFFEIAENKEDYNKFYEAFSKNLKLGIHEDS NR KIAELLRYHSTKSGD
Sbjct: 301 RKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRNKIAELLRYHSTKSGD 360
Query: 1410 ELTSLKDYVTRMKEGQNEIYYITGESKKAVENSPFLEKLKKKGYEVIYMVDAIDEYAIGQ 1589
ELTSLKDYVTRMKEGQN+IYYITGESKKAVENSPFLEKLKKKGYEV+YMVDAIDEYA+GQ
Sbjct: 361 ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQ 420
Query: 1590 LKEFEGKKLVSATKEGLKLDESEDEKKKQEELKEKFEGLCKVIKEVLGDKVEKVIVSDRV 1769
LKEFEGKKLVSATKEGLKLDESEDEKK++EELKEKFEGLCKVIKEVLGDKVEKV+VSDRV
Sbjct: 421 LKEFEGKKLVSATKEGLKLDESEDEKKRKEELKEKFEGLCKVIKEVLGDKVEKVVVSDRV 480
Query: 1770 VDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMDELRKRADA 1949
VDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIM+ELRKRADA
Sbjct: 481 VDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADA 540
Query: 1950 DKNDKSVKDLVMLLFETSLLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDDEAPENDTDMP 2129
DKNDKSVKDLV+LLFET+LLTSGFSL+DPNTFG+RIHRMLKLGLSIDED+ A E DTDMP
Sbjct: 541 DKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSIDEDETA-EADTDMP 599
Query: 2130 PLEDDAGESKMEEVD 2174
PLEDDAGESKMEEVD
Sbjct: 600 PLEDDAGESKMEEVD 614
9632.m00078|protein Similar to heat shock protein HSP82 - maize
Length = 703
Score = 1178 bits (3015), Expect = 0.0
Identities = 584/703 (83%), Positives = 649/703 (92%), Gaps = 2/703 (0%)
Frame = +3
Query: 66 DAAMATETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSK 245
D MA E ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSK
Sbjct: 6 DVQMA-EKETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSK 64
Query: 246 LDAQPELFIHIIPDKATSTLTIVDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVS 425
LDAQPELFI ++P K + TL+I+DSG+GMTKSDLVNNLGTIARSGTKEFMEAL AGADVS
Sbjct: 65 LDAQPELFIRLVPYKPSKTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALQAGADVS 124
Query: 426 MIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKMVL 605
MIGQFGVGFYSAYLVAE+VVVTTKHNDDEQYVWESQAGGSFTVT DT+GE+LGRGTK+ L
Sbjct: 125 MIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTLDTAGERLGRGTKITL 184
Query: 606 YLKDDQMEYLEERRIKDLVKKHSEFISYPISLWTEKTTEKEISDDEDEEEKKDTEEGKVE 785
+LKDDQ+EYLEERR+KDLVKKHSEFISYPI LW+EKTTEKEISDDED++ D +GK +
Sbjct: 185 FLKDDQLEYLEERRLKDLVKKHSEFISYPIYLWSEKTTEKEISDDEDDDI--DDSKGKEK 242
Query: 786 DVDEEKEEKEKKKKKIKEVSHEWNLVNKQKPIWMRKPEEINKEEYAAFYKSLTNDWEEHL 965
+ D E+ + +KKKKK+ EVSHEW +NKQKPIW+RKPEEI++EEYA+FYKSLTNDWE+HL
Sbjct: 243 EGDIEEVKDKKKKKKVNEVSHEWVQINKQKPIWLRKPEEISREEYASFYKSLTNDWEDHL 302
Query: 966 AVKHFSVEGQLEFKAVLFVPKRAPFDLFDNKKKANNIKLYVRRVFIMDNCDELIPEYLSF 1145
AVKHFSVEGQLEFKA+LFVP+RAPFDLFD +KK NNIKLYVRRVFIMDNC+ELIPE+L F
Sbjct: 303 AVKHFSVEGQLEFKAILFVPRRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEWLGF 362
Query: 1146 VKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFFEIAENKEDYNKFYEAFSKN 1325
VKG+VDS+DLPLNISRE LQQNKILKVIRKNLVKKCIE+FFEIA+NKEDY KFYEAFSKN
Sbjct: 363 VKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFFEIADNKEDYAKFYEAFSKN 422
Query: 1326 LKLGIHEDSQNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQNEIYYITGESKKAVEN 1505
LKLGIHEDSQNR K+A+LLRYHSTKSG+ELTSLKDYVTRMKEGQ E+YYITGES+KAVEN
Sbjct: 423 LKLGIHEDSQNRGKLADLLRYHSTKSGNELTSLKDYVTRMKEGQKEVYYITGESRKAVEN 482
Query: 1506 SPFLEKLKKKGYEVIYMVDAIDEYAIGQLKEFEGKKLVSATKEGLKLDESEDEKKKQEEL 1685
SPFLEKLKKKGYEV++MVDAIDEYA+GQLKE++GKKLVSATKEGLKLD+ +D K E
Sbjct: 483 SPFLEKLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDDDDAK----ER 538
Query: 1686 KEKFEGLCKVIKEVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSM 1865
K FE LCKVIK++LGD+VEKV+VSDR+VDSPCCLVTGEYGWTANMERIMKAQALRDSSM
Sbjct: 539 KRSFEPLCKVIKDILGDRVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSM 598
Query: 1866 AGYMSSKKTMEINPENAIMDELRKRADADKNDKSVKDLVMLLFETSLLTSGFSLEDPNTF 2045
YMSSKKTMEINPEN IM+ELRKRADAD NDKSV+DLV+LLFET+LLTSGFSL+DPNTF
Sbjct: 599 GAYMSSKKTMEINPENGIMEELRKRADADANDKSVRDLVLLLFETALLTSGFSLDDPNTF 658
Query: 2046 GTRIHRMLKLGLSIDEDD-EAPENDTDMPPLEDDAG-ESKMEEVD 2174
RIHRMLKLGL+ID+DD A ++D DMP L+D A ESKMEEVD
Sbjct: 659 AARIHRMLKLGLNIDDDDAAAADDDADMPALDDAAAEESKMEEVD 703
9634.m04916|protein Hsp90 protein, putative
Length = 818
Score = 640 bits (1632), Expect = 0.0
Identities = 337/705 (47%), Positives = 480/705 (67%), Gaps = 33/705 (4%)
Frame = +3
Query: 54 EQLRDAAMATETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLT 233
E + + + E F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF +LT
Sbjct: 93 ESISRKTLRSSAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALT 152
Query: 234 DKSKLDA--QPELFIHIIPDKATSTLTIVDSGIGMTKSDLVNNLGTIARSGTKEFMEALA 407
DK L +L I I DK L+I D GI F+E +
Sbjct: 153 DKEVLGEGDTAKLEIQIKLDKEKKILSIRDRGIA--------------------FVEKMQ 192
Query: 408 AGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGR 587
G D+++IGQFGVGFYS YLVA+ V V +KHNDD+Q+VWES+A GSF ++ DT E LGR
Sbjct: 193 TGGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQHVWESKADGSFAISEDTWNEPLGR 252
Query: 588 GTKMVLYLKDDQMEYLEERRIKDLVKKHSEFISYPISLWTEKTTEKEISDDEDE-----E 752
GT++ L+L+D+ EY+EE ++KDLVKK+SEFI++PI LW K + E+ DEDE E
Sbjct: 253 GTEIRLHLRDEAKEYVEEDKLKDLVKKYSEFINFPIYLWATKEVDVEVPADEDESSESSE 312
Query: 753 EKKDTEEGKVEDVDEEKEEKEKKKKKIKEVSHEWNLVNKQKPIWMRKPEEINKEEYAAFY 932
E++ + E E+ EE EEK+ K K +KE + EW L+N K IW+R P+E+ +EEY FY
Sbjct: 313 EEESSPESTEEEETEESEEKKPKTKTVKETTTEWELLNDVKAIWLRSPKEVTEEEYTKFY 372
Query: 933 KSLTNDW--EEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDNKKKAN--NIKLYVRRVF 1100
SL D+ ++ L+ HF+ EG +EFKA+LFVP +AP DL+++ +N N+KLYVRRVF
Sbjct: 373 HSLAKDFGDDKPLSWSHFTAEGDVEFKALLFVPPKAPHDLYESYYNSNKSNLKLYVRRVF 432
Query: 1101 IMDNCDELIPEYLSFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFFEIAE 1280
I D DEL+P+YLSF+KG+VDS+ LPLN+SRE LQQ+ LK I+K L++K +++ ++AE
Sbjct: 433 ISDEFDELLPKYLSFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAE 492
Query: 1281 NKED---------------------YNKFYEAFSKNLKLGIHEDSQNRTKIAELLRYHST 1397
D Y KF+ F K++KLGI ED+ NR ++A+LLR+ ST
Sbjct: 493 EDPDEYSNKDKTDEEKSAMEEKKGQYAKFWNEFGKSVKLGIIEDATNRNRLAKLLRFEST 552
Query: 1398 KSGDELTSLKDYVTRMKEGQNEIYYITGESKKAVENSPFLEKLKKKGYEVIYMVDAIDEY 1577
KS +L SL +Y++RMK GQ +I+YITG SK+ +E SPFLE+L KK YEVIY D +DEY
Sbjct: 553 KSEGKLASLDEYISRMKPGQKDIFYITGSSKEQLEKSPFLERLTKKNYEVIYFTDPVDEY 612
Query: 1578 AIGQLKEFEGKKLVSATKEGLKLDESEDEKKKQEELKEKFEGLCKVIKEVLG-DKVEKVI 1754
+ L ++E KK + +KEGLKL + K ++LKE F+ L K+ L + V+ V
Sbjct: 613 LMQYLMDYEDKKFQNVSKEGLKLGKD----SKLKDLKESFKELTDWWKKALDTESVDSVK 668
Query: 1755 VSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMDELR 1934
+S+R+ D+PC +VT +YGW+ANME+IM++Q L D+S YM K+ +EINP + I+ ELR
Sbjct: 669 ISNRLSDTPCVVVTSKYGWSANMEKIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELR 728
Query: 1935 KRADADKNDKSVKDLVMLLFETSLLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDDEAPEN 2114
+ D +S+K L+++T+L+ SGF+L DP F + I+R ++ L + D E
Sbjct: 729 DKVAQDSESESLKQTAKLVYQTALMESGFNLPDPKDFASSIYRSVQKSLDLSPDAAVEE- 787
Query: 2115 DTDMPPLEDDAGESKMEE 2168
E++ E+++EE
Sbjct: 788 -------EEEVEEAEVEE 798
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 163419082
Number of Sequences: 59712
Number of extensions: 5093325
Number of successful extensions: 61908
Number of sequences better than 1.0e-10: 20
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 61723
Number of HSP's gapped (non-prelim): 35
length of query: 853
length of database: 26,991,925
effective HSP length: 53
effective length of query: 800
effective length of database: 23,827,189
effective search space: 19061751200
effective search space used: 19061751200
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 162 (67.5 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1206 Members:203 3pri:Y 1e-123
AAD11549.1 heat shock protein 80 [Triticum aestivum]
(2566 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9636.m03953|protein Similar to heat shock protein 82 1342 0.0
9637.m02719|protein Similar to heat shock protein 82 1331 0.0
9632.m00078|protein Similar to heat shock protein HSP82 -... 1195 0.0
9636.m03952|protein Similar to heat shock protein 82 1185 0.0
9634.m04916|protein Hsp90 protein, putative 646 0.0
9637.m02656|protein heat-shock protein, 82K, precursor - rye 607 e-173
9636.m03832|protein heat-shock protein, 82K, precursor - rye 603 e-172
9636.m03831|protein heat-shock protein, 82K, precursor - rye 603 e-172
9640.m03211|protein AC009176 putative heat-shock protein 592 e-169
9637.m03067|protein Similar to heat shock protein 90A 445 e-124
9636.m03953|protein Similar to heat shock protein 82
Length = 699
Score = 1342 bits (3434), Expect = 0.0
Identities = 662/700 (94%), Positives = 692/700 (98%)
Frame = +1
Query: 166 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDA 345
MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISN+SDALDKIRFESLTDKSKLDA
Sbjct: 1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 60
Query: 346 QPELFIHIIPDKATNTLTLIDSGIGMTKSDLVNNLGTIARSGTKDFMEALAAGADVSMIG 525
QPELFIHI+PDKA+NTL++IDSGIGMTKSDLVNNLGTIARSGTK+FMEALAAGADVSMIG
Sbjct: 61 QPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIG 120
Query: 526 QFGVGFYSAYLVAERVVVTSKHNDDEQYVWESQAGGSFTVTRDTTGEPLGRGTKITLYLK 705
QFGVGFYSAYLVAERVVVT+KHNDDEQYVWESQAGGSFTVTRDT+GE LGRGTKITLYLK
Sbjct: 121 QFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLK 180
Query: 706 DDQLEYLEERRLKDLVKKHSEFISYPISLWTEKTTEKEISDDEDEDEKKDTEEGKVEEID 885
DDQLEYLEERRLKDL+KKHSEFISYPISLWTEKTTEKEISDDEDE+EKKD EEGKVE++D
Sbjct: 181 DDQLEYLEERRLKDLIKKHSEFISYPISLWTEKTTEKEISDDEDEEEKKDAEEGKVEDVD 240
Query: 886 EEKEEKEKKKKKIKEVSHEWNLINKQKPIWMRKPEEITKDEYAAFYKSLTNDWEEHLAVK 1065
EEKEEKEKKKKKIKEVSHEW+L+NKQKPIWMRKPEEITK+EYAAFYKSLTNDWEEHLAVK
Sbjct: 241 EEKEEKEKKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVK 300
Query: 1066 HFSVEGQLEFKAVLFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKG 1245
HFSVEGQLEFKAVLFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKG
Sbjct: 301 HFSVEGQLEFKAVLFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKG 360
Query: 1246 IVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFFEIAENKEDYTKFYEAFSKNLKL 1425
IVDSEDLPLNISRE LQQNKILKVIRKNLVKKC+ELFFEIAENKEDY KFYEAFSKNLKL
Sbjct: 361 IVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKL 420
Query: 1426 GVHEDSTNRTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPF 1605
G+HEDSTNR K+AELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPF
Sbjct: 421 GIHEDSTNRNKIAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPF 480
Query: 1606 LEKLKKKGYEVLYMVDAIDEYSIGQLKEFEGKKLVSATKEGLKLDDSEEEKKRKEELKEK 1785
LEKLKKKGYEVLYMVDAIDEY++GQLKEFEGKKLVSATKEGLKLD+SE+EKKRKEELKEK
Sbjct: 481 LEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRKEELKEK 540
Query: 1786 FEGLCKVIKDVLGDRVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDTSMGGY 1965
FEGLCKVIK+VLGD+VEKV+VSDRVVDSPCCLVTGEYGWTANMERIMKAQALRD+SM GY
Sbjct: 541 FEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGY 600
Query: 1966 MSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVMLLFETSLLTSGFSLDDPNTFGTR 2145
MSSKKTMEINPENAIMEELRKRADADKNDKSVKDLV+LLFET+LLTSGFSLDDPNTFG+R
Sbjct: 601 MSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSR 660
Query: 2146 IHRMLKLGLSIDEDDEPAEADTDMPPLEEDAGESKMEEVD 2265
IHRMLKLGLSIDE DE AEADTDMPPLE+DAGESKMEEVD
Sbjct: 661 IHRMLKLGLSIDE-DETAEADTDMPPLEDDAGESKMEEVD 699
9637.m02719|protein Similar to heat shock protein 82
Length = 699
Score = 1331 bits (3408), Expect = 0.0
Identities = 655/700 (93%), Positives = 691/700 (98%)
Frame = +1
Query: 166 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDA 345
MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISN+SDALDKIRFESLTDKSKLDA
Sbjct: 1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 60
Query: 346 QPELFIHIIPDKATNTLTLIDSGIGMTKSDLVNNLGTIARSGTKDFMEALAAGADVSMIG 525
QPELFIHI+PDKA+NTL++IDSG+GMTKSDLVNNLGTIARSGTK+FMEALAAGADVSMIG
Sbjct: 61 QPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIG 120
Query: 526 QFGVGFYSAYLVAERVVVTSKHNDDEQYVWESQAGGSFTVTRDTTGEPLGRGTKITLYLK 705
QFGVGFYSAYLVAERVVVT+KHNDDEQYVWESQAGGSFTVTRDT+GE LGRGTKITLYLK
Sbjct: 121 QFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLK 180
Query: 706 DDQLEYLEERRLKDLVKKHSEFISYPISLWTEKTTEKEISDDEDEDEKKDTEEGKVEEID 885
DDQLEYLEERRLKDLVKKHSEFISYPISLWTEKTTEKEISDDEDE+EKKD EEGKVE++D
Sbjct: 181 DDQLEYLEERRLKDLVKKHSEFISYPISLWTEKTTEKEISDDEDEEEKKDAEEGKVEDVD 240
Query: 886 EEKEEKEKKKKKIKEVSHEWNLINKQKPIWMRKPEEITKDEYAAFYKSLTNDWEEHLAVK 1065
EEKEEKEKKKKKIKEVSHEWN++NKQKPIW+RKPEEITK+EYAAFYKSLTNDWEEHLAVK
Sbjct: 241 EEKEEKEKKKKKIKEVSHEWNVMNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVK 300
Query: 1066 HFSVEGQLEFKAVLFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKG 1245
HFSVEGQLEFKA+LFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPEWLSFVKG
Sbjct: 301 HFSVEGQLEFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKG 360
Query: 1246 IVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFFEIAENKEDYTKFYEAFSKNLKL 1425
IVDSEDLPLNISRE LQQNKILKVIRKNLVKKC+ELFFEIAENKEDY KFYEAFSKNLKL
Sbjct: 361 IVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKL 420
Query: 1426 GVHEDSTNRTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPF 1605
G+HEDSTNRTK+AELLRYHSTKSGDELTSLKDYVTRMKEGQ++IYYITGESKKAVENSPF
Sbjct: 421 GIHEDSTNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQSEIYYITGESKKAVENSPF 480
Query: 1606 LEKLKKKGYEVLYMVDAIDEYSIGQLKEFEGKKLVSATKEGLKLDDSEEEKKRKEELKEK 1785
LEKLKKKGYEVLYMVDAIDEY++GQLKEFEGKKLVSATKEGLKLD+SE+EKKR+EELKEK
Sbjct: 481 LEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRQEELKEK 540
Query: 1786 FEGLCKVIKDVLGDRVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDTSMGGY 1965
FEGLCKVIK+VLGD+VEKV+VSDRVVDSPCCLVTGEYGWTANMERIMKAQALRD+SM GY
Sbjct: 541 FEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGY 600
Query: 1966 MSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVMLLFETSLLTSGFSLDDPNTFGTR 2145
MSSKKTMEINPEN+IM+ELRKRADADKNDKSVKDLVMLLFET+LLTSGFSL+DPNTFGTR
Sbjct: 601 MSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTR 660
Query: 2146 IHRMLKLGLSIDEDDEPAEADTDMPPLEEDAGESKMEEVD 2265
IHRMLKLGLSIDE DE AEAD DMPPLE+DAGESKMEEVD
Sbjct: 661 IHRMLKLGLSIDE-DESAEADADMPPLEDDAGESKMEEVD 699
9632.m00078|protein Similar to heat shock protein HSP82 - maize
Length = 703
Score = 1195 bits (3057), Expect = 0.0
Identities = 592/706 (83%), Positives = 652/706 (91%), Gaps = 2/706 (0%)
Frame = +1
Query: 148 SAAGGAMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTD 327
+AAG +E ETFAFQAEINQLLSLIINTFYSNKEIFLRELISN+SDALDKIRFESLTD
Sbjct: 2 AAAGDVQMAEKETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTD 61
Query: 328 KSKLDAQPELFIHIIPDKATNTLTLIDSGIGMTKSDLVNNLGTIARSGTKDFMEALAAGA 507
KSKLDAQPELFI ++P K + TL++IDSG+GMTKSDLVNNLGTIARSGTK+FMEAL AGA
Sbjct: 62 KSKLDAQPELFIRLVPYKPSKTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALQAGA 121
Query: 508 DVSMIGQFGVGFYSAYLVAERVVVTSKHNDDEQYVWESQAGGSFTVTRDTTGEPLGRGTK 687
DVSMIGQFGVGFYSAYLVAE+VVVT+KHNDDEQYVWESQAGGSFTVT DT GE LGRGTK
Sbjct: 122 DVSMIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTLDTAGERLGRGTK 181
Query: 688 ITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLWTEKTTEKEISDDEDEDEKKDTEEG 867
ITL+LKDDQLEYLEERRLKDLVKKHSEFISYPI LW+EKTTEKEISDDED+D D +G
Sbjct: 182 ITLFLKDDQLEYLEERRLKDLVKKHSEFISYPIYLWSEKTTEKEISDDEDDDI--DDSKG 239
Query: 868 KVEEIDEEKEEKEKKKKKIKEVSHEWNLINKQKPIWMRKPEEITKDEYAAFYKSLTNDWE 1047
K +E D E+ + +KKKKK+ EVSHEW INKQKPIW+RKPEEI+++EYA+FYKSLTNDWE
Sbjct: 240 KEKEGDIEEVKDKKKKKKVNEVSHEWVQINKQKPIWLRKPEEISREEYASFYKSLTNDWE 299
Query: 1048 EHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEW 1227
+HLAVKHFSVEGQLEFKA+LFVP+RAPFDLFDTRKK+NNIKLYVRRVFIMDNCEELIPEW
Sbjct: 300 DHLAVKHFSVEGQLEFKAILFVPRRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEW 359
Query: 1228 LSFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFFEIAENKEDYTKFYEAF 1407
L FVKG+VDS+DLPLNISRE LQQNKILKVIRKNLVKKCIE+FFEIA+NKEDY KFYEAF
Sbjct: 360 LGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFFEIADNKEDYAKFYEAF 419
Query: 1408 SKNLKLGVHEDSTNRTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKA 1587
SKNLKLG+HEDS NR KLA+LLRYHSTKSG+ELTSLKDYVTRMKEGQ ++YYITGES+KA
Sbjct: 420 SKNLKLGIHEDSQNRGKLADLLRYHSTKSGNELTSLKDYVTRMKEGQKEVYYITGESRKA 479
Query: 1588 VENSPFLEKLKKKGYEVLYMVDAIDEYSIGQLKEFEGKKLVSATKEGLKLDDSEEEKKRK 1767
VENSPFLEKLKKKGYEVL+MVDAIDEY++GQLKE++GKKLVSATKEGLKLDD ++ K+R
Sbjct: 480 VENSPFLEKLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDDDDAKER- 538
Query: 1768 EELKEKFEGLCKVIKDVLGDRVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRD 1947
K FE LCKVIKD+LGDRVEKV+VSDR+VDSPCCLVTGEYGWTANMERIMKAQALRD
Sbjct: 539 ---KRSFEPLCKVIKDILGDRVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRD 595
Query: 1948 TSMGGYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVMLLFETSLLTSGFSLDDP 2127
+SMG YMSSKKTMEINPEN IMEELRKRADAD NDKSV+DLV+LLFET+LLTSGFSLDDP
Sbjct: 596 SSMGAYMSSKKTMEINPENGIMEELRKRADADANDKSVRDLVLLLFETALLTSGFSLDDP 655
Query: 2128 NTFGTRIHRMLKLGLSIDEDD-EPAEADTDMPPLEEDAG-ESKMEEVD 2265
NTF RIHRMLKLGL+ID+DD A+ D DMP L++ A ESKMEEVD
Sbjct: 656 NTFAARIHRMLKLGLNIDDDDAAAADDDADMPALDDAAAEESKMEEVD 703
9636.m03952|protein Similar to heat shock protein 82
Length = 614
Score = 1185 bits (3032), Expect = 0.0
Identities = 582/615 (94%), Positives = 607/615 (98%)
Frame = +1
Query: 421 MTKSDLVNNLGTIARSGTKDFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTSKHNDD 600
MTKSDLVNNLGTIARSGTK+FMEALAAGADVSMIGQFGVGFYSAYLVAERVVVT+KHNDD
Sbjct: 1 MTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDD 60
Query: 601 EQYVWESQAGGSFTVTRDTTGEPLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISY 780
EQYVWESQAGGSFTVTRDT+GE LGRGTKITLYLKDDQLEYLEERRLKDL+KKHSEFISY
Sbjct: 61 EQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLIKKHSEFISY 120
Query: 781 PISLWTEKTTEKEISDDEDEDEKKDTEEGKVEEIDEEKEEKEKKKKKIKEVSHEWNLINK 960
PISLWTEKTTEKEISDDEDE+EKKD EEGKVE++DEEKEEKEKKKKKIKEVSHEW+L+NK
Sbjct: 121 PISLWTEKTTEKEISDDEDEEEKKDAEEGKVEDVDEEKEEKEKKKKKIKEVSHEWSLVNK 180
Query: 961 QKPIWMRKPEEITKDEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLF 1140
QKPIWMRKPEEITK+EYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLF
Sbjct: 181 QKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLF 240
Query: 1141 DTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISRETLQQNKILKVI 1320
DTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISRE LQQNKILKVI
Sbjct: 241 DTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVI 300
Query: 1321 RKNLVKKCIELFFEIAENKEDYTKFYEAFSKNLKLGVHEDSTNRTKLAELLRYHSTKSGD 1500
RKNLVKKC+ELFFEIAENKEDY KFYEAFSKNLKLG+HEDSTNR K+AELLRYHSTKSGD
Sbjct: 301 RKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRNKIAELLRYHSTKSGD 360
Query: 1501 ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYSIGQ 1680
ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEY++GQ
Sbjct: 361 ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQ 420
Query: 1681 LKEFEGKKLVSATKEGLKLDDSEEEKKRKEELKEKFEGLCKVIKDVLGDRVEKVIVSDRV 1860
LKEFEGKKLVSATKEGLKLD+SE+EKKRKEELKEKFEGLCKVIK+VLGD+VEKV+VSDRV
Sbjct: 421 LKEFEGKKLVSATKEGLKLDESEDEKKRKEELKEKFEGLCKVIKEVLGDKVEKVVVSDRV 480
Query: 1861 VDSPCCLVTGEYGWTANMERIMKAQALRDTSMGGYMSSKKTMEINPENAIMEELRKRADA 2040
VDSPCCLVTGEYGWTANMERIMKAQALRD+SM GYMSSKKTMEINPENAIMEELRKRADA
Sbjct: 481 VDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADA 540
Query: 2041 DKNDKSVKDLVMLLFETSLLTSGFSLDDPNTFGTRIHRMLKLGLSIDEDDEPAEADTDMP 2220
DKNDKSVKDLV+LLFET+LLTSGFSLDDPNTFG+RIHRMLKLGLSIDE DE AEADTDMP
Sbjct: 541 DKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSIDE-DETAEADTDMP 599
Query: 2221 PLEEDAGESKMEEVD 2265
PLE+DAGESKMEEVD
Sbjct: 600 PLEDDAGESKMEEVD 614
9634.m04916|protein Hsp90 protein, putative
Length = 818
Score = 646 bits (1649), Expect = 0.0
Identities = 345/724 (47%), Positives = 484/724 (66%), Gaps = 32/724 (4%)
Frame = +1
Query: 88 HPLSLPSTLVDSARACVPGASAAGGAMASETETFAFQAEINQLLSLIINTFYSNKEIFLR 267
H LS S +V S + + S E F FQAE+++L+ +IIN+ YSNK+IFLR
Sbjct: 79 HGLSTDSEVVQRE-----AESISRKTLRSSAEKFEFQAEVSRLMDIIINSLYSNKDIFLR 133
Query: 268 ELISNASDALDKIRFESLTDKSKLDA--QPELFIHIIPDKATNTLTLIDSGIGMTKSDLV 441
ELISNASDALDKIRF +LTDK L +L I I DK L++ D GI
Sbjct: 134 ELISNASDALDKIRFLALTDKEVLGEGDTAKLEIQIKLDKEKKILSIRDRGIA------- 186
Query: 442 NNLGTIARSGTKDFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTSKHNDDEQYVWES 621
F+E + G D+++IGQFGVGFYS YLVA+ V V SKHNDD+Q+VWES
Sbjct: 187 -------------FVEKMQTGGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQHVWES 233
Query: 622 QAGGSFTVTRDTTGEPLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLWTE 801
+A GSF ++ DT EPLGRGT+I L+L+D+ EY+EE +LKDLVKK+SEFI++PI LW
Sbjct: 234 KADGSFAISEDTWNEPLGRGTEIRLHLRDEAKEYVEEDKLKDLVKKYSEFINFPIYLWAT 293
Query: 802 KTTEKEISDDEDE-----DEKKDTEEGKVEEIDEEKEEKEKKKKKIKEVSHEWNLINKQK 966
K + E+ DEDE +E++ + E EE EE EEK+ K K +KE + EW L+N K
Sbjct: 294 KEVDVEVPADEDESSESSEEEESSPESTEEEETEESEEKKPKTKTVKETTTEWELLNDVK 353
Query: 967 PIWMRKPEEITKDEYAAFYKSLTNDW--EEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLF 1140
IW+R P+E+T++EY FY SL D+ ++ L+ HF+ EG +EFKA+LFVP +AP DL+
Sbjct: 354 AIWLRSPKEVTEEEYTKFYHSLAKDFGDDKPLSWSHFTAEGDVEFKALLFVPPKAPHDLY 413
Query: 1141 DTRKKLN--NIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISRETLQQNKILK 1314
++ N N+KLYVRRVFI D +EL+P++LSF+KG+VDS+ LPLN+SRE LQQ+ LK
Sbjct: 414 ESYYNSNKSNLKLYVRRVFISDEFDELLPKYLSFLKGLVDSDTLPLNVSREMLQQHSSLK 473
Query: 1315 VIRKNLVKKCIELFFEIAENKED---------------------YTKFYEAFSKNLKLGV 1431
I+K L++K +++ ++AE D Y KF+ F K++KLG+
Sbjct: 474 TIKKKLIRKALDMIRKLAEEDPDEYSNKDKTDEEKSAMEEKKGQYAKFWNEFGKSVKLGI 533
Query: 1432 HEDSTNRTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLE 1611
ED+TNR +LA+LLR+ STKS +L SL +Y++RMK GQ DI+YITG SK+ +E SPFLE
Sbjct: 534 IEDATNRNRLAKLLRFESTKSEGKLASLDEYISRMKPGQKDIFYITGSSKEQLEKSPFLE 593
Query: 1612 KLKKKGYEVLYMVDAIDEYSIGQLKEFEGKKLVSATKEGLKLDDSEEEKKRKEELKEKFE 1791
+L KK YEV+Y D +DEY + L ++E KK + +KEGLKL + K KE KE +
Sbjct: 594 RLTKKNYEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSKLKDLKESFKELTD 653
Query: 1792 GLCKVIKDVLGDRVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDTSMGGYMS 1971
K + + V+ V +S+R+ D+PC +VT +YGW+ANME+IM++Q L D S YM
Sbjct: 654 WWKKALDT---ESVDSVKISNRLSDTPCVVVTSKYGWSANMEKIMQSQTLSDASKQAYMR 710
Query: 1972 SKKTMEINPENAIMEELRKRADADKNDKSVKDLVMLLFETSLLTSGFSLDDPNTFGTRIH 2151
K+ +EINP + I++ELR + D +S+K L+++T+L+ SGF+L DP F + I+
Sbjct: 711 GKRVLEINPRHPIIKELRDKVAQDSESESLKQTAKLVYQTALMESGFNLPDPKDFASSIY 770
Query: 2152 RMLKLGLSIDEDDEPAEADTDMPPLEEDAGESKMEE 2259
R ++ L + D E EE+ E+++EE
Sbjct: 771 RSVQKSLDLSPDAAVEE--------EEEVEEAEVEE 798
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 162406474
Number of Sequences: 59712
Number of extensions: 5033342
Number of successful extensions: 64433
Number of sequences better than 1.0e-10: 20
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64328
Number of HSP's gapped (non-prelim): 21
length of query: 855
length of database: 26,991,925
effective HSP length: 53
effective length of query: 801
effective length of database: 23,827,189
effective search space: 19085578389
effective search space used: 19085578389
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 162 (67.5 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1208 Members:191 3pri:Y 1e-132
AAF23819.1 chlorophyll a/b binding protein precursor [Hordeum
vulgare]
(1088 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9634.m02114|protein chlorophyll a/b-binding protein precu... 462 e-130
9635.m03689|protein probable chlorophyll a/b-binding prot... 158 1e-38
9636.m03389|protein chlorophyll a/b-binding protein presu... 148 2e-35
9637.m00977|protein Chlorophyll A-B binding protein, puta... 147 3e-35
9635.m03882|protein LHCI-680, photosystem I antenna prote... 146 8e-35
9639.m01284|protein chlorophyll a/b-binding protein CP26 ... 146 8e-35
9629.m05067|protein Chlorophyll A-B binding protein, puta... 143 5e-34
9637.m01516|protein chlorophyll a/b-binding protein I pre... 141 2e-33
9629.m03990|protein Chlorophyll A-B binding protein, puta... 140 4e-33
9631.m03807|protein chlorophyll a/b binding protein 140 4e-33
9637.m02343|protein AY086461 PSI type II chlorophyll a/b-... 140 5e-33
9635.m03724|protein chlorophyll a-b binding protein of lh... 139 1e-32
9630.m05194|protein light-harvesting complex protein [imp... 139 1e-32
9630.m00958|protein chlorophyll a/b-binding protein type ... 138 2e-32
9632.m03624|protein chlorophyll a/b-binding apoprotein CP... 94 3e-19
9630.m00957|protein chlorophyll a/b-binding protein type ... 94 5e-19
9639.m01283|protein chlorophyll a/b-binding protein CP26 ... 72 2e-12
9634.m02114|protein chlorophyll a/b-binding protein precursor
Length = 241
Score = 462 bits (1176), Expect = e-130
Identities = 218/241 (90%), Positives = 226/241 (93%)
Frame = +2
Query: 83 SSSGLRSCSAVGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAEWFPGQPRPAHLDGSS 262
++SGLRSCSAVGVPSLLAPSS RS LP CAYATTSGRVTMSAEW PGQPRPAHLDGSS
Sbjct: 2 ATSGLRSCSAVGVPSLLAPSSN--RSRLPVCAYATTSGRVTMSAEWMPGQPRPAHLDGSS 59
Query: 263 PGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALP 442
PGDFGFDPLGLATVPENFERFKESE+YHCRWAML VPGVLVPEALGLGNWV+AQEWAA P
Sbjct: 60 PGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQEWAAEP 119
Query: 443 DGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGAFDPLGFSKDPA 622
GQATYLGNPVPWG LPTIL IEF+AIAFAE QRTMEKDPEKKKYPGGAFDPLGFSKDP
Sbjct: 120 GGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFSKDPV 179
Query: 623 KFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPRNI 802
KFEE KLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLA+HL+DPWHNNIGDI+IPR I
Sbjct: 180 KFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLASHLSDPWHNNIGDIIIPRTI 239
Query: 803 Y 805
Y
Sbjct: 240 Y 240
9635.m03689|protein probable chlorophyll a/b-binding protein -
rice
Length = 290
Score = 158 bits (396), Expect = 1e-38
Identities = 112/235 (47%), Positives = 141/235 (59%), Gaps = 54/235 (22%)
Frame = +2
Query: 77 MASSSGLRSCSAVGVPSLLAPSSRSGRSGLPFC----------AYATTSGRVTMSAEWFP 226
MASS + + +G L P+ +SGR F A S T WFP
Sbjct: 1 MASSVAAAASTFLGT-RLADPAPQSGRIVARFGFGGGKKAAAKKAARPSAPTTDRPLWFP 59
Query: 227 GQPRPAHLDGSSPGDFGFDPLGLATVPE-------------------------------- 310
G P +LDGS GD+GFDP GL E
Sbjct: 60 GAVAPDYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNNAGEIIGTRFETGEVK 119
Query: 311 -----------NFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQAT 457
+RF+E E+ H RWAML G L E L W A + L DG ++
Sbjct: 120 STPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGK-VELVDG-SS 177
Query: 458 YLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGA-FDPLGFSKDPAKFEE 634
YLG P+P+ ++ T++ IE L I + E QR E DPEK+ YPGG+ FDPLG + DP K E
Sbjct: 178 YLGQPLPF-SISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKER 236
Query: 635 LKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD 781
L+L EIK+ RLAM+AF+GF VQ +A G GPL N ATHL+DP H I D
Sbjct: 237 LQLAEIKHARLAMVAFLGFAVQAAA-TGKGPLNNWATHLSDPLHTTIFD 284
9636.m03389|protein chlorophyll a/b-binding protein presursor
Length = 244
Score = 148 bits (369), Expect = 2e-35
Identities = 94/208 (45%), Positives = 121/208 (57%), Gaps = 19/208 (9%)
Frame = +2
Query: 152 GRSGLPFCAYATTSGRVTMSA--EWFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERF 325
G+S TT V A EW PG P P +L+GS PGD GFDPLGLA PEN F
Sbjct: 25 GQSSTRLARAPTTRRNVRAEAKGEWLPGLPSPTYLNGSLPGDNGFDPLGLAEDPENLRWF 84
Query: 326 KESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILA 505
++E+ + RWAML V G+L+PE L + A +W G+ATY + + T+
Sbjct: 85 VQAELVNGRWAMLGVAGMLLPEVLTKIGLIDAPQW--YDAGKATY------FASSSTLFV 136
Query: 506 IEFLAIAFAEQQR--------TMEKDPEKKK---------YPGGAFDPLGFSKDPAKFEE 634
IEF+ + E +R + +DP K YPG F+PL F +P E
Sbjct: 137 IEFILFHYVEIRRWQDIKNPGCVNQDPIFKSYSLPPHECGYPGSVFNPLNF--EPTL--E 192
Query: 635 LKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 775
K KE+ NGRLAMLAF+GF VQ + GP +NL HL+DPWHN I
Sbjct: 193 AKEKELANGRLAMLAFLGFLVQHNV-TQKGPFDNLLQHLSDPWHNTI 238
9637.m00977|protein Chlorophyll A-B binding protein, putative
Length = 321
Score = 147 bits (368), Expect = 3e-35
Identities = 92/179 (51%), Positives = 115/179 (63%), Gaps = 21/179 (11%)
Frame = +2
Query: 239 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEAL---GLGN 409
PAHL G PGD+GFD GL P F + EI HCRWAML GV+VPE L G+ +
Sbjct: 118 PAHLTGEYPGDYGFDIAGLGRDPVAFANYFNFEILHCRWAMLAALGVVVPELLDLFGVVH 177
Query: 410 WVKAQEW----AALPDGQATYLGNP---VPWGNLPTILAI-EFLAIAFAEQQRTMEKD-- 559
+V+ W A L YLG P + G ++AI + L + E R +
Sbjct: 178 FVEPVWWKVGYAKLQGDTLDYLGIPGFRIAGGQGVIVIAICQALLMVGPEYARYCGIEAL 237
Query: 560 -------PEKKKYPGGA-FDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYP 715
P YPGGA FDPLG SKDP FE+LK+KEIKNGRLAM+A++GF + Q+A
Sbjct: 238 EPLGLYLPGDINYPGGALFDPLGLSKDPVAFEDLKVKEIKNGRLAMVAWLGFYI-QAAVT 296
Query: 716 GTGPLENLATHLADPWHNNI 775
G GP++NL HL+DP HNNI
Sbjct: 297 GKGPIQNLVEHLSDPLHNNI 316
9635.m03882|protein LHCI-680, photosystem I antenna protein -
barley
Length = 263
Score = 146 bits (364), Expect = 8e-35
Identities = 101/243 (41%), Positives = 134/243 (54%), Gaps = 28/243 (11%)
Frame = +2
Query: 68 AMAMASSSGLRSCSAVGVPSLLAPSSRSGRSGLPFCAYA-TTSGRVTMSAE--------W 220
A+ ASSS + G + +GRSG A ++S R + + W
Sbjct: 2 ALVSASSSTTAVAALPGAARASSFLGGAGRSGRLLLRQAESSSARASFAVRAAAPDRPIW 61
Query: 221 FPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALG 400
FPG P LDGS PGDFGFDPLGL + PE+ ++E+ HCRWAML G+ +PE L
Sbjct: 62 FPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLT 121
Query: 401 LGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQR--------TMEK 556
+ W G+ Y + + T+ IE + I +AE +R +
Sbjct: 122 KIGILNTPSWYTA--GEQQY------FTDTTTLFIIELILIGWAEGRRWADIIKPGCVNT 173
Query: 557 DP---------EKKKYPGGA-FDPLGF-SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQ 703
DP YPGG FDPLG+ + P K +EL+ KEIKNGRLAMLA +G Q
Sbjct: 174 DPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWF-Q 232
Query: 704 SAYPGTGPLENLATHLADPWHNNIGDIVIPR 796
+ Y GTGP++NL HLADP H I P+
Sbjct: 233 AEYTGTGPIDNLFAHLADPGHATIFQAFTPK 263
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83734179
Number of Sequences: 59712
Number of extensions: 3273829
Number of successful extensions: 96260
Number of sequences better than 1.0e-10: 34
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 96186
Number of HSP's gapped (non-prelim): 27
length of query: 362
length of database: 26,991,925
effective HSP length: 51
effective length of query: 311
effective length of database: 23,946,613
effective search space: 7447396643
effective search space used: 7447396643
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1210 Members:7 3pri:Y 8e-99
NP_568785.1 spermidine synthase [Arabidopsis thaliana]
ref|NP_851178.1| spermidine synthase [Arabidopsis thaliana]
(1563 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9630.m01456|protein spermidine synthase, putative 701 0.0
9634.m03165|protein spermidine synthase, putative 650 0.0
9634.m03164|protein spermidine synthase, putative 650 0.0
9635.m02137|protein spermidine synthase 439 e-123
9635.m02138|protein spermidine synthase 425 e-118
9630.m01318|protein Similar to AB076725 spermine synthase 101 4e-21
9630.m01456|protein spermidine synthase, putative
Length = 397
Score = 701 bits (1789), Expect = 0.0
Identities = 343/385 (89%), Positives = 357/385 (92%), Gaps = 11/385 (2%)
Frame = +3
Query: 243 MEGGDVRNG-LTGTSQTKGSGVDSPA----------KPLPPCCVKARAAAPESEAKCHAT 389
MEGG RNG TG ++T GSG D+ A KPLPPCCVKARAAAPESEAKCHAT
Sbjct: 1 MEGGGARNGSTTGAARTGGSGGDAAAGGGGGSAGNGKPLPPCCVKARAAAPESEAKCHAT 60
Query: 390 VVSGWFTETHSRCGKASKLQYYNNPMWPGETHSLKVEKILYQGKSPYQEVLIFESLTYGK 569
VVSGWFTE SR GK SK+QYYNNPMWPGE HSLKVEKILYQGKSPYQEVL+FES TYGK
Sbjct: 61 VVSGWFTEPRSRGGKTSKVQYYNNPMWPGEAHSLKVEKILYQGKSPYQEVLVFESSTYGK 120
Query: 570 VLVLDGIVQLTDKDECAYQEMITHLPLCSIPSPKKVLVIGGGDGGVLREIARHGSVESID 749
VLVLDGIVQLTDKDECAYQEMITHLPLCSIPSPKKVLVIGGGDGGVLREI RHGSVESID
Sbjct: 121 VLVLDGIVQLTDKDECAYQEMITHLPLCSIPSPKKVLVIGGGDGGVLREICRHGSVESID 180
Query: 750 ICEIDQLVIDVCKDFFPDLSVGFKDPRVRLHVGDAVEFLRNTPEGTYDAIIVDSSDPIGP 929
ICEIDQLVIDVCKDFFPDLSVGFKDPRVRLHVGDAVEFLRN PEGTYDAIIVDSSDPIGP
Sbjct: 181 ICEIDQLVIDVCKDFFPDLSVGFKDPRVRLHVGDAVEFLRNAPEGTYDAIIVDSSDPIGP 240
Query: 930 AQELVEKPFFETIARALRPGGVLCNQAESMWLHTHLIQDMLSICCETFKGSVHYAWTSVP 1109
AQELVEKPFF+TIARALRPGGVLCNQAESMWLHTHLIQDMLSIC ETFKGSVHYAWTSVP
Sbjct: 241 AQELVEKPFFDTIARALRPGGVLCNQAESMWLHTHLIQDMLSICRETFKGSVHYAWTSVP 300
Query: 1110 TYPSGAIGFLLCAKEGPPVNFLAPINPIEKLEGAMTAGRDIRFYNTEMHKAAFVLPTFAK 1289
TYPSG IGFLLCAKEGPPVNFL P NPIEKLEGAM AGRDIRFYN+EMH+AAFVLPTFA+
Sbjct: 301 TYPSGVIGFLLCAKEGPPVNFLTPANPIEKLEGAMEAGRDIRFYNSEMHRAAFVLPTFAR 360
Query: 1290 RELETYGGSTRRAQQEETSAEPAKVAIVPHSEILTA 1397
RELE Y + R QQEET+AEP K+ I+P+SEILTA
Sbjct: 361 RELEAYCTTVEREQQEETTAEPLKMNIMPNSEILTA 396
9634.m03165|protein spermidine synthase, putative
Length = 387
Score = 650 bits (1658), Expect = 0.0
Identities = 307/385 (79%), Positives = 342/385 (88%), Gaps = 1/385 (0%)
Frame = +3
Query: 243 MEGGDVRNGLTGTSQTKGSGVDSPAKPLPPCCVKARAAAPESEAKCHATVVSGWFTETHS 422
MEGG ++G +QT+GSG D KPLPPCC+KA+AAA ESEAKCHATVVSGWFTE S
Sbjct: 1 MEGGGAKDGSAAAAQTRGSGDDGSHKPLPPCCLKAKAAAAESEAKCHATVVSGWFTEPRS 60
Query: 423 RCGKASKLQYYNNPMWPGETHSLKVEKILYQGKSPYQEVLIFESLTYGKVLVLDGIVQLT 602
GK SK+QY+NNPMWPGE HSLKVE ILYQGKSPYQE+L+FES TYG VLVLDGIVQLT
Sbjct: 61 HSGKTSKVQYFNNPMWPGEAHSLKVENILYQGKSPYQEILVFESSTYGNVLVLDGIVQLT 120
Query: 603 DKDECAYQEMITHLPLCSIPSPKKVLVIGGGDGGVLREIARHGSVESIDICEIDQLVIDV 782
+KDECAYQEM+THLPLCSIPSPK VLV+GGGDGGVLREIARH SVE+IDICEIDQLVIDV
Sbjct: 121 EKDECAYQEMVTHLPLCSIPSPKSVLVVGGGDGGVLREIARHASVENIDICEIDQLVIDV 180
Query: 783 CKDFFPDLSVGFKDPRVRLHVGDAVEFLRNTPEGTYDAIIVDSSDPIGPAQELVEKPFFE 962
CKDFFP LSVGFKDPRV+LHVGDAV+FLRN PEG YDAIIVDSSDPIGPAQELVEKPFF+
Sbjct: 181 CKDFFPQLSVGFKDPRVQLHVGDAVDFLRNAPEGKYDAIIVDSSDPIGPAQELVEKPFFQ 240
Query: 963 TIARALRPGGVLCNQAESMWLHTHLIQDMLSICCETFKGSVHYAWTSVPTYPSGAIGFLL 1142
TIARAL+PGGVLCNQAESMWLHTHLIQDMLSIC ETFKG+VHYAWTSVPTYPSG IGFLL
Sbjct: 241 TIARALKPGGVLCNQAESMWLHTHLIQDMLSICRETFKGAVHYAWTSVPTYPSGVIGFLL 300
Query: 1143 CAKEGPPVNFLAPINPIEKLEGAMTAGRDIRFYNTEMHKAAFVLPTFAKRELETYGGSTR 1322
CAKEGP VNFL+P+NPIEKLEGAM AGR+IRFYN+E+H+AAFVLPTF +RELE++
Sbjct: 301 CAKEGPAVNFLSPVNPIEKLEGAMEAGREIRFYNSEVHRAAFVLPTFVRRELESHNTCAE 360
Query: 1323 RAQQE-ETSAEPAKVAIVPHSEILTA 1397
+ + E + A+P K+ I+P+S I TA
Sbjct: 361 KDKSETKPVAKPKKMKIMPNSAIPTA 386
9634.m03164|protein spermidine synthase, putative
Length = 387
Score = 650 bits (1658), Expect = 0.0
Identities = 307/385 (79%), Positives = 342/385 (88%), Gaps = 1/385 (0%)
Frame = +3
Query: 243 MEGGDVRNGLTGTSQTKGSGVDSPAKPLPPCCVKARAAAPESEAKCHATVVSGWFTETHS 422
MEGG ++G +QT+GSG D KPLPPCC+KA+AAA ESEAKCHATVVSGWFTE S
Sbjct: 1 MEGGGAKDGSAAAAQTRGSGDDGSHKPLPPCCLKAKAAAAESEAKCHATVVSGWFTEPRS 60
Query: 423 RCGKASKLQYYNNPMWPGETHSLKVEKILYQGKSPYQEVLIFESLTYGKVLVLDGIVQLT 602
GK SK+QY+NNPMWPGE HSLKVE ILYQGKSPYQE+L+FES TYG VLVLDGIVQLT
Sbjct: 61 HSGKTSKVQYFNNPMWPGEAHSLKVENILYQGKSPYQEILVFESSTYGNVLVLDGIVQLT 120
Query: 603 DKDECAYQEMITHLPLCSIPSPKKVLVIGGGDGGVLREIARHGSVESIDICEIDQLVIDV 782
+KDECAYQEM+THLPLCSIPSPK VLV+GGGDGGVLREIARH SVE+IDICEIDQLVIDV
Sbjct: 121 EKDECAYQEMVTHLPLCSIPSPKSVLVVGGGDGGVLREIARHASVENIDICEIDQLVIDV 180
Query: 783 CKDFFPDLSVGFKDPRVRLHVGDAVEFLRNTPEGTYDAIIVDSSDPIGPAQELVEKPFFE 962
CKDFFP LSVGFKDPRV+LHVGDAV+FLRN PEG YDAIIVDSSDPIGPAQELVEKPFF+
Sbjct: 181 CKDFFPQLSVGFKDPRVQLHVGDAVDFLRNAPEGKYDAIIVDSSDPIGPAQELVEKPFFQ 240
Query: 963 TIARALRPGGVLCNQAESMWLHTHLIQDMLSICCETFKGSVHYAWTSVPTYPSGAIGFLL 1142
TIARAL+PGGVLCNQAESMWLHTHLIQDMLSIC ETFKG+VHYAWTSVPTYPSG IGFLL
Sbjct: 241 TIARALKPGGVLCNQAESMWLHTHLIQDMLSICRETFKGAVHYAWTSVPTYPSGVIGFLL 300
Query: 1143 CAKEGPPVNFLAPINPIEKLEGAMTAGRDIRFYNTEMHKAAFVLPTFAKRELETYGGSTR 1322
CAKEGP VNFL+P+NPIEKLEGAM AGR+IRFYN+E+H+AAFVLPTF +RELE++
Sbjct: 301 CAKEGPAVNFLSPVNPIEKLEGAMEAGREIRFYNSEVHRAAFVLPTFVRRELESHNTCAE 360
Query: 1323 RAQQE-ETSAEPAKVAIVPHSEILTA 1397
+ + E + A+P K+ I+P+S I TA
Sbjct: 361 KDKSETKPVAKPKKMKIMPNSAIPTA 386
9635.m02137|protein spermidine synthase
Length = 323
Score = 439 bits (1117), Expect = e-123
Identities = 204/314 (64%), Positives = 252/314 (79%)
Frame = +3
Query: 351 AAAPESEAKCHATVVSGWFTETHSRCGKASKLQYYNNPMWPGETHSLKVEKILYQGKSPY 530
AAA E + V+ GWF+E +PMWPGE HSLKVEK+L+QGKS Y
Sbjct: 17 AAAGAGEQAGISAVIPGWFSEI--------------SPMWPGEAHSLKVEKVLFQGKSDY 62
Query: 531 QEVLIFESLTYGKVLVLDGIVQLTDKDECAYQEMITHLPLCSIPSPKKVLVIGGGDGGVL 710
Q V++F+S TYGKVLVLDG++Q+T++DECAYQEMITHLPLCSI PKKVLVIGGGDGGVL
Sbjct: 63 QNVMVFQSSTYGKVLVLDGVIQVTERDECAYQEMITHLPLCSIKDPKKVLVIGGGDGGVL 122
Query: 711 REIARHGSVESIDICEIDQLVIDVCKDFFPDLSVGFKDPRVRLHVGDAVEFLRNTPEGTY 890
RE++RH SVE IDICEID++V+DV K FFP L+VGF+DPRV LH+GD V FL+N PEGTY
Sbjct: 123 REVSRHSSVEQIDICEIDKMVVDVSKQFFPHLAVGFEDPRVSLHIGDGVAFLKNAPEGTY 182
Query: 891 DAIIVDSSDPIGPAQELVEKPFFETIARALRPGGVLCNQAESMWLHTHLIQDMLSICCET 1070
DA+IVDSSDPIGPAQEL EKPFF+++ARALRPGGV+C QAES+WLH H+I+D+++ C +
Sbjct: 183 DAVIVDSSDPIGPAQELFEKPFFQSVARALRPGGVVCTQAESIWLHMHIIEDIVANCRQV 242
Query: 1071 FKGSVHYAWTSVPTYPSGAIGFLLCAKEGPPVNFLAPINPIEKLEGAMTAGRDIRFYNTE 1250
FKGSV+YAWT+VPTYPSG IGF+LC+ EGP V+F PI IE E + + ++FYN+E
Sbjct: 243 FKGSVNYAWTTVPTYPSGVIGFMLCSTEGPTVDFQHPIFNIEDNEFSTKSKGPLKFYNSE 302
Query: 1251 MHKAAFVLPTFAKR 1292
+H A+F LP+FAKR
Sbjct: 303 IHSASFCLPSFAKR 316
9635.m02138|protein spermidine synthase
Length = 319
Score = 425 bits (1080), Expect = e-118
Identities = 200/314 (63%), Positives = 248/314 (78%)
Frame = +3
Query: 351 AAAPESEAKCHATVVSGWFTETHSRCGKASKLQYYNNPMWPGETHSLKVEKILYQGKSPY 530
AAA E + V+ GWF+E +PMWPGE HSLKVEK+L+QGKS Y
Sbjct: 17 AAAGAGEQAGISAVIPGWFSEI--------------SPMWPGEAHSLKVEKVLFQGKSDY 62
Query: 531 QEVLIFESLTYGKVLVLDGIVQLTDKDECAYQEMITHLPLCSIPSPKKVLVIGGGDGGVL 710
Q V++F+S TYGKVLVLDG++Q+T++DECAYQEMITHLPLCSI PKKVLVIGGGDGGVL
Sbjct: 63 QNVMVFQSSTYGKVLVLDGVIQVTERDECAYQEMITHLPLCSIKDPKKVLVIGGGDGGVL 122
Query: 711 REIARHGSVESIDICEIDQLVIDVCKDFFPDLSVGFKDPRVRLHVGDAVEFLRNTPEGTY 890
RE++RH SVE IDICEID++V+DV K FFP L+VGF+DPRV LH+GD V FL+N PEGTY
Sbjct: 123 REVSRHSSVEQIDICEIDKMVVDVSKQFFPHLAVGFEDPRVSLHIGDGVAFLKNAPEGTY 182
Query: 891 DAIIVDSSDPIGPAQELVEKPFFETIARALRPGGVLCNQAESMWLHTHLIQDMLSICCET 1070
DA+IVDSSDPI EL EKPFF+++ARALRPGGV+C QAES+WLH H+I+D+++ C +
Sbjct: 183 DAVIVDSSDPI----ELFEKPFFQSVARALRPGGVVCTQAESIWLHMHIIEDIVANCRQV 238
Query: 1071 FKGSVHYAWTSVPTYPSGAIGFLLCAKEGPPVNFLAPINPIEKLEGAMTAGRDIRFYNTE 1250
FKGSV+YAWT+VPTYPSG IGF+LC+ EGP V+F PI IE E + + ++FYN+E
Sbjct: 239 FKGSVNYAWTTVPTYPSGVIGFMLCSTEGPTVDFQHPIFNIEDNEFSTKSKGPLKFYNSE 298
Query: 1251 MHKAAFVLPTFAKR 1292
+H A+F LP+FAKR
Sbjct: 299 IHSASFCLPSFAKR 312
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104572508
Number of Sequences: 59712
Number of extensions: 3303331
Number of successful extensions: 53916
Number of sequences better than 1.0e-10: 12
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53900
Number of HSP's gapped (non-prelim): 8
length of query: 521
length of database: 26,991,925
effective HSP length: 52
effective length of query: 468
effective length of database: 23,886,901
effective search space: 11179069668
effective search space used: 11179069668
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1216 Members:65 3pri:Y 5e-86
P42767 Aquaporin PIP-type gb|AAA86991.1| aquaporin
(1255 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9632.m01476|protein MIP family channel proteins, putative 518 e-147
9635.m02571|protein MIP family channel proteins, putative 433 e-121
9630.m04003|protein plasma membrane intrinsic protein BPW... 432 e-121
9632.m04226|protein MIP family channel proteins, putative 419 e-117
9635.m02567|protein MIP family channel proteins, putative 415 e-116
9635.m02564|protein MIP family channel proteins, putative 411 e-114
9637.m03122|protein MIP family channel proteins, putative 407 e-113
9630.m04319|protein aquaporin 405 e-112
9630.m05755|protein water channel protein RWC3 382 e-106
9630.m04002|protein plasma membrane intrinsic protein BPW... 378 e-104
9632.m04558|protein MIP family channel proteins, putative 332 e-102
9631.m06380|protein putative plasma membrane intrinsic pr... 352 7e-97
9638.m02985|protein putative aquaporin 324 2e-88
9630.m04001|protein plasma membrane intrinsic protein BPW... 295 1e-79
9635.m02565|protein Major intrinsic protein, putative 270 4e-72
9629.m07384|protein MIP family channel proteins 144 4e-34
9634.m02259|protein delta-type tonoplast intrinsic protein 143 6e-34
9630.m04256|protein MIP family channel proteins 131 3e-30
9638.m03093|protein putative beta-tonoplast intrinsic pro... 130 5e-30
9632.m04280|protein MIP family channel proteins, putative 126 7e-29
9632.m01476|protein MIP family channel proteins, putative
Length = 282
Score = 518 bits (1321), Expect = e-147
Identities = 251/284 (88%), Positives = 268/284 (93%)
Frame = +3
Query: 30 MAKEVSEEPEHAAPARKDYSDPPPAPLFDMGELRMWSFYRALIAEFVATLLFLYITVATV 209
M+KEVSEEPEH P KDY+DPPPAPLFD+GELR+WSFYRALIAEF+ATLLFLYITVATV
Sbjct: 1 MSKEVSEEPEHVRP--KDYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFLYITVATV 58
Query: 210 IGYKVQSAADPCAGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLLARKVSLL 389
IGYKVQS+AD C GVG LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLLLARKVS++
Sbjct: 59 IGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVI 118
Query: 390 RAVMYIVAQCAGGIVGAGIVKGIMKDAYQANGGGANMVASGFSRGTALGAEIVGTFVLVY 569
RAVMYIVAQC GGIVG GIVKGIMK Y ANGGGANMVASG+S GTALGAEI+GTFVLVY
Sbjct: 119 RAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVY 178
Query: 570 TVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKKA 749
TVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS+GAAVIYN+K
Sbjct: 179 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKK 238
Query: 750 AWDNHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSSRSN 881
AWD+HWIFW GPF+GALAAAAYHQYILRAAAIKALGSFRS+ SN
Sbjct: 239 AWDDHWIFWAGPFIGALAAAAYHQYILRAAAIKALGSFRSNPSN 282
9635.m02571|protein MIP family channel proteins, putative
Length = 290
Score = 433 bits (1101), Expect = e-121
Identities = 211/267 (79%), Positives = 231/267 (86%), Gaps = 6/267 (2%)
Frame = +3
Query: 72 ARKDYSDPPPAPLFDMGELRMWSFYRALIAEFVATLLFLYITVATVIGYKVQSAADP--- 242
A KDY+DPPPAPL D EL WS YRA+IAEF+ATLLFLYITVATVIGYK Q+ A
Sbjct: 17 AAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGA 76
Query: 243 ---CAGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLLARKVSLLRAVMYIVA 413
C GVGVLGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGL LARKVSL+RA++YIVA
Sbjct: 77 DAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVA 136
Query: 414 QCAGGIVGAGIVKGIMKDAYQANGGGANMVASGFSRGTALGAEIVGTFVLVYTVFSATDP 593
QC G I G G+VK + GGGAN +A+G+S+GT L AEI+GTFVLVYTVFSATDP
Sbjct: 137 QCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVFSATDP 196
Query: 594 KRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKKAAWDNHWIF 773
KR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS+GAAVI+N + AW NHWIF
Sbjct: 197 KRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHNHWIF 256
Query: 774 WVGPFVGALAAAAYHQYILRAAAIKALGSFRSS 872
WVGPFVGA AA YHQYILRA AIKALGSFRS+
Sbjct: 257 WVGPFVGAAIAAFYHQYILRAGAIKALGSFRSN 289
9630.m04003|protein plasma membrane intrinsic protein BPW1 -
barley
Length = 288
Score = 432 bits (1099), Expect = e-121
Identities = 212/281 (75%), Positives = 240/281 (84%), Gaps = 7/281 (2%)
Frame = +3
Query: 30 MAKEV-SEEPEHAAPARKDYSDPPPAPLFDMGELRMWSFYRALIAEFVATLLFLYITVAT 206
MAK++ + PE + KDY+DPPPAPL D+ EL WS YRA+IAEF+ATLLFLYITVAT
Sbjct: 1 MAKDIEASAPEGGEFSAKDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVAT 60
Query: 207 VIGYKVQSAAD------PCAGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLL 368
VIGYK QS A C+GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGL L
Sbjct: 61 VIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL 120
Query: 369 ARKVSLLRAVMYIVAQCAGGIVGAGIVKGIMKDAYQANGGGANMVASGFSRGTALGAEIV 548
ARKVSL+RAV+YI+AQC G I G G+VKG Y GGGAN ++ G+S+GT LGAEI+
Sbjct: 121 ARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEII 180
Query: 549 GTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAA 728
GTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGFAVFMVHLATIPITGTGINPARSLG A
Sbjct: 181 GTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTA 240
Query: 729 VIYNKKAAWDNHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSS 872
VIYNK AWD+ WIFWVGP +GA AAAYHQY+LRA+A K LGS+RS+
Sbjct: 241 VIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASAAK-LGSYRSN 287
9632.m04226|protein MIP family channel proteins, putative
Length = 290
Score = 419 bits (1065), Expect = e-117
Identities = 217/282 (76%), Positives = 238/282 (83%), Gaps = 12/282 (4%)
Frame = +3
Query: 30 MAKEVSEEPEHAAPAR------KDYSDPPPAPLFDMGELRMWSFYRALIAEFVATLLFLY 191
MAK++ E AA A KDYSDPPPAPL D EL WS YRA+IAEFVATLLFLY
Sbjct: 1 MAKDI----EAAAAAEGGEYMAKDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLY 56
Query: 192 ITVATVIGYKVQS-----AADP-CAGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVT 353
ITVATVIGYK QS AAD C+GVG+LGIAWAFGGMIF+LVYCTAG+SGGHINPAVT
Sbjct: 57 ITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVT 116
Query: 354 FGLLLARKVSLLRAVMYIVAQCAGGIVGAGIVKGIMKDAYQANGGGANMVASGFSRGTAL 533
FGL LARKVSL+RAV+YIVAQ G I G G+VKG Y GGGAN ++ G+S+GT L
Sbjct: 117 FGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGL 176
Query: 534 GAEIVGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPAR 713
AEI+GTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPAR
Sbjct: 177 AAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPAR 236
Query: 714 SLGAAVIYNKKAAWDNHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSSR 875
SLGAAVIYN+ AW +HWIFWVGP +GA AAAYHQY+LRA+A K LGS S R
Sbjct: 237 SLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYVLRASAAK-LGSSSSFR 289
9635.m02567|protein MIP family channel proteins, putative
Length = 283
Score = 415 bits (1056), Expect = e-116
Identities = 202/277 (72%), Positives = 230/277 (82%), Gaps = 6/277 (2%)
Frame = +3
Query: 42 VSEEPEHAAPARKDYSDPPPAPLFDMGELRMWSFYRALIAEFVATLLFLYITVATVIGYK 221
+ +E + A +DY DPPPAPL D+ EL WS YRA+IAEFVATLLFLY+TVATVIGYK
Sbjct: 1 MGKEADVEAGGVRDYEDPPPAPLVDIDELGRWSLYRAVIAEFVATLLFLYVTVATVIGYK 60
Query: 222 VQSAADP------CAGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLLARKVS 383
Q+ A C GVGVLGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGL LARKVS
Sbjct: 61 HQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVS 120
Query: 384 LLRAVMYIVAQCAGGIVGAGIVKGIMKDAYQANGGGANMVASGFSRGTALGAEIVGTFVL 563
L+RA++YIVAQC G + G +VKG Y GGGAN +A+G+S+GT L AEI+GTFVL
Sbjct: 121 LVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVL 180
Query: 564 VYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNK 743
VYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARSLGAAV+YN
Sbjct: 181 VYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNN 240
Query: 744 KAAWDNHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSS 872
AW + WIFWVGPF+GA AA YHQ +LRA+A + GSFRS+
Sbjct: 241 SKAWSDQWIFWVGPFIGAAIAALYHQIVLRASA-RGYGSFRSN 282
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97166940
Number of Sequences: 59712
Number of extensions: 3659338
Number of successful extensions: 87837
Number of sequences better than 1.0e-10: 71
Number of HSP's better than 0.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 86694
Number of HSP's gapped (non-prelim): 257
length of query: 418
length of database: 26,991,925
effective HSP length: 52
effective length of query: 365
effective length of database: 23,886,901
effective search space: 8718718865
effective search space used: 8718718865
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1222 Members:89 3pri:Y 1e-129
AAK26758.1 plasma membrane integral protein ZmPIP2-1 [Zea mays]
(1259 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9635.m02571|protein MIP family channel proteins, putative 537 e-152
9630.m04003|protein plasma membrane intrinsic protein BPW... 504 e-142
9632.m04226|protein MIP family channel proteins, putative 490 e-138
9635.m02567|protein MIP family channel proteins, putative 482 e-136
9635.m02564|protein MIP family channel proteins, putative 480 e-135
9630.m04002|protein plasma membrane intrinsic protein BPW... 444 e-124
9632.m01476|protein MIP family channel proteins, putative 436 e-122
9630.m04319|protein aquaporin 397 e-110
9637.m03122|protein MIP family channel proteins, putative 394 e-109
9630.m05755|protein water channel protein RWC3 379 e-105
9631.m06380|protein putative plasma membrane intrinsic pr... 372 e-103
9630.m04001|protein plasma membrane intrinsic protein BPW... 353 5e-97
9632.m04558|protein MIP family channel proteins, putative 334 9e-96
9638.m02985|protein putative aquaporin 339 7e-93
9635.m02565|protein Major intrinsic protein, putative 296 7e-80
9629.m07384|protein MIP family channel proteins 145 2e-34
9630.m04256|protein MIP family channel proteins 143 8e-34
9634.m02259|protein delta-type tonoplast intrinsic protein 141 2e-33
9631.m00449|protein tonoplast intrinsic protein, gamma (g... 131 2e-30
9638.m03093|protein putative beta-tonoplast intrinsic pro... 129 1e-29
9635.m02571|protein MIP family channel proteins, putative
Length = 290
Score = 537 bits (1368), Expect = e-152
Identities = 264/290 (91%), Positives = 278/290 (95%), Gaps = 1/290 (0%)
Frame = +3
Query: 45 MAKDEVMETGGG-GDFAAKDYTDPPPAPLVDAAELASWSLYRAVIAEFIATLLFLYITVA 221
M KDEVME+GG G+FAAKDYTDPPPAPL+DAAEL SWSLYRAVIAEFIATLLFLYITVA
Sbjct: 1 MGKDEVMESGGAAGEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVA 60
Query: 222 TVIGYKHQTDPAVNSAADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 401
TVIGYKHQTD + S ADAACGGVGVLGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGL
Sbjct: 61 TVIGYKHQTDASA-SGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 119
Query: 402 FLARKVSLVRALLYMVAQCLGAMCGVGLVKAFQSAYFVRYGGGANTLAAGYSKGTGLAAE 581
FLARKVSLVRA+LY+VAQCLGA+CGVGLVKAFQSAYF RYGGGANTLAAGYSKGTGLAAE
Sbjct: 120 FLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAE 179
Query: 582 IIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLG 761
IIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS+G
Sbjct: 180 IIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIG 239
Query: 762 AAVIYNKDKAWDDQWIFWVGPMIGAAIAAFYHQYILRAGAIKALGSFRSNA 914
AAVI+N +KAW + WIFWVGP +GAAIAAFYHQYILRAGAIKALGSFRSNA
Sbjct: 240 AAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYILRAGAIKALGSFRSNA 290
9630.m04003|protein plasma membrane intrinsic protein BPW1 -
barley
Length = 288
Score = 504 bits (1285), Expect = e-142
Identities = 244/290 (84%), Positives = 264/290 (90%)
Frame = +3
Query: 45 MAKDEVMETGGGGDFAAKDYTDPPPAPLVDAAELASWSLYRAVIAEFIATLLFLYITVAT 224
MAKD GG+F+AKDYTDPPPAPL+D EL WSLYRAVIAEFIATLLFLYITVAT
Sbjct: 1 MAKDIEASAPEGGEFSAKDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVAT 60
Query: 225 VIGYKHQTDPAVNSAADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 404
VIGYKHQ+D VN+ DAAC GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLF
Sbjct: 61 VIGYKHQSDATVNTT-DAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLF 119
Query: 405 LARKVSLVRALLYMVAQCLGAMCGVGLVKAFQSAYFVRYGGGANTLAAGYSKGTGLAAEI 584
LARKVSL+RA+LY++AQCLGA+CGVGLVK FQS+Y+ RYGGGAN L+ GYSKGTGL AEI
Sbjct: 120 LARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEI 179
Query: 585 IGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGA 764
IGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGFAVFMVHLATIPITGTGINPARSLG
Sbjct: 180 IGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGT 239
Query: 765 AVIYNKDKAWDDQWIFWVGPMIGAAIAAFYHQYILRAGAIKALGSFRSNA 914
AVIYNKDKAWDDQWIFWVGP+IGAAIAA YHQY+LRA A K LGS+RSNA
Sbjct: 240 AVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASAAK-LGSYRSNA 288
9632.m04226|protein MIP family channel proteins, putative
Length = 290
Score = 490 bits (1248), Expect = e-138
Identities = 242/288 (84%), Positives = 261/288 (90%), Gaps = 1/288 (0%)
Frame = +3
Query: 45 MAKD-EVMETGGGGDFAAKDYTDPPPAPLVDAAELASWSLYRAVIAEFIATLLFLYITVA 221
MAKD E GG++ AKDY+DPPPAPL+DA EL WSLYRAVIAEF+ATLLFLYITVA
Sbjct: 1 MAKDIEAAAAAEGGEYMAKDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVA 60
Query: 222 TVIGYKHQTDPAVNSAADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 401
TVIGYKHQ+DP N AADAAC GVG+LGIAWAFGGMIF+LVYCTAG+SGGHINPAVTFGL
Sbjct: 61 TVIGYKHQSDPGAN-AADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGL 119
Query: 402 FLARKVSLVRALLYMVAQCLGAMCGVGLVKAFQSAYFVRYGGGANTLAAGYSKGTGLAAE 581
FLARKVSLVRA+LY+VAQ LGA+CGVGLVK FQSA++VRYGGGAN L+ GYSKGTGLAAE
Sbjct: 120 FLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGLAAE 179
Query: 582 IIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLG 761
IIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLG
Sbjct: 180 IIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLG 239
Query: 762 AAVIYNKDKAWDDQWIFWVGPMIGAAIAAFYHQYILRAGAIKALGSFRS 908
AAVIYN+ KAW D WIFWVGP+IGAAIAA YHQY+LRA A K LGS S
Sbjct: 240 AAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYVLRASAAK-LGSSSS 287
9635.m02567|protein MIP family channel proteins, putative
Length = 283
Score = 482 bits (1227), Expect = e-136
Identities = 238/290 (82%), Positives = 256/290 (88%)
Frame = +3
Query: 45 MAKDEVMETGGGGDFAAKDYTDPPPAPLVDAAELASWSLYRAVIAEFIATLLFLYITVAT 224
M K+ +E GG +DY DPPPAPLVD EL WSLYRAVIAEF+ATLLFLY+TVAT
Sbjct: 1 MGKEADVEAGG-----VRDYEDPPPAPLVDIDELGRWSLYRAVIAEFVATLLFLYVTVAT 55
Query: 225 VIGYKHQTDPAVNSAADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 404
VIGYKHQTD + S DAACGGVGVLGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLF
Sbjct: 56 VIGYKHQTDASA-SGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLF 114
Query: 405 LARKVSLVRALLYMVAQCLGAMCGVGLVKAFQSAYFVRYGGGANTLAAGYSKGTGLAAEI 584
LARKVSLVRA+LY+VAQCLGA+CGV LVK FQS+++ RYGGGAN LAAGYSKGTGLAAEI
Sbjct: 115 LARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEI 174
Query: 585 IGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGA 764
IGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARSLGA
Sbjct: 175 IGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGA 234
Query: 765 AVIYNKDKAWDDQWIFWVGPMIGAAIAAFYHQYILRAGAIKALGSFRSNA 914
AV+YN KAW DQWIFWVGP IGAAIAA YHQ +LRA A + GSFRSNA
Sbjct: 235 AVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRASA-RGYGSFRSNA 283
9635.m02564|protein MIP family channel proteins, putative
Length = 286
Score = 480 bits (1222), Expect = e-135
Identities = 238/284 (83%), Positives = 252/284 (87%)
Frame = +3
Query: 63 METGGGGDFAAKDYTDPPPAPLVDAAELASWSLYRAVIAEFIATLLFLYITVATVIGYKH 242
+E GG A+DY DPPPAPLVD EL WSLYRA+IAEF+ATLLFLY+TVATVIGYKH
Sbjct: 10 LEAGG-----ARDYIDPPPAPLVDVDELGKWSLYRALIAEFVATLLFLYVTVATVIGYKH 64
Query: 243 QTDPAVNSAADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVS 422
QTD AVN A DAACGGVGVLGIAWAFGGMIF+LVYCTAG+SGGHINPAVT GLFLARKVS
Sbjct: 65 QTDAAVNGA-DAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVS 123
Query: 423 LVRALLYMVAQCLGAMCGVGLVKAFQSAYFVRYGGGANTLAAGYSKGTGLAAEIIGTFVL 602
LVRALLYM AQCLGA+CGV LVK FQS+ + RYGGGAN LAAGYS GTGLAAEIIGTFVL
Sbjct: 124 LVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVL 183
Query: 603 VYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNK 782
VYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLG AV+YN
Sbjct: 184 VYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNN 243
Query: 783 DKAWDDQWIFWVGPMIGAAIAAFYHQYILRAGAIKALGSFRSNA 914
+KAW DQWIFWVGP IGAAIAA YHQ ILRA A + GSFRSNA
Sbjct: 244 NKAWSDQWIFWVGPFIGAAIAALYHQVILRASA-RGYGSFRSNA 286
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98308941
Number of Sequences: 59712
Number of extensions: 3553036
Number of successful extensions: 64086
Number of sequences better than 1.0e-10: 61
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 63556
Number of HSP's gapped (non-prelim): 173
length of query: 419
length of database: 26,991,925
effective HSP length: 52
effective length of query: 367
effective length of database: 23,886,901
effective search space: 8766492667
effective search space used: 8766492667
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1223 Members:31 3pri:Y 1e-104
AAD28761.1 plasma membrane intrinsic protein [Zea mays]
gb|AAO86708.1| aquaporin [Zea mays]
(1125 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9632.m04226|protein MIP family channel proteins, putative 535 e-152
9630.m04003|protein plasma membrane intrinsic protein BPW... 518 e-147
9635.m02571|protein MIP family channel proteins, putative 491 e-138
9635.m02567|protein MIP family channel proteins, putative 481 e-135
9635.m02564|protein MIP family channel proteins, putative 474 e-133
9630.m04002|protein plasma membrane intrinsic protein BPW... 458 e-129
9632.m01476|protein MIP family channel proteins, putative 428 e-120
9630.m04319|protein aquaporin 400 e-111
9630.m05755|protein water channel protein RWC3 394 e-109
9637.m03122|protein MIP family channel proteins, putative 390 e-108
9630.m04001|protein plasma membrane intrinsic protein BPW... 373 e-103
9631.m06380|protein putative plasma membrane intrinsic pr... 369 e-102
9632.m04558|protein MIP family channel proteins, putative 338 e-100
9638.m02985|protein putative aquaporin 326 3e-89
9635.m02565|protein Major intrinsic protein, putative 285 1e-76
9629.m07384|protein MIP family channel proteins 153 4e-37
9634.m02259|protein delta-type tonoplast intrinsic protein 142 1e-33
9630.m04256|protein MIP family channel proteins 139 6e-33
9638.m03093|protein putative beta-tonoplast intrinsic pro... 136 7e-32
9632.m04280|protein MIP family channel proteins, putative 129 7e-30
9632.m04226|protein MIP family channel proteins, putative
Length = 290
Score = 535 bits (1364), Expect = e-152
Identities = 268/287 (93%), Positives = 273/287 (94%), Gaps = 2/287 (0%)
Frame = +1
Query: 64 MAKDIEAAPP--GGEYGAKDYSDPPPAPLFDAEELTKWSLYRAVIAEFVATLLFLYITVA 237
MAKDIEAA GGEY AKDYSDPPPAPL DAEELTKWSLYRAVIAEFVATLLFLYITVA
Sbjct: 1 MAKDIEAAAAAEGGEYMAKDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVA 60
Query: 238 TVIGYKHQADPAGPNAADAACSGVGILGIAWAFGGMIFVLVYCTAGVSGGHINPAVTFGL 417
TVIGYKHQ+DP G NAADAACSGVGILGIAWAFGGMIF+LVYCTAGVSGGHINPAVTFGL
Sbjct: 61 TVIGYKHQSDP-GANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGL 119
Query: 418 FLARKVSLVRAVLYIIAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAE 597
FLARKVSLVRAVLYI+AQ LGAICGVGLVKGFQSAFYVRYGGGANELS GYSKGTGLAAE
Sbjct: 120 FLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGLAAE 179
Query: 598 IIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFG 777
IIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS G
Sbjct: 180 IIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLG 239
Query: 778 AAVIYNNEKAWDDHWIFWVGPFIGAAIAAAYHQYVLRASATKLGSSASF 924
AAVIYN KAW DHWIFWVGP IGAAIAAAYHQYVLRASA KLGSS+SF
Sbjct: 240 AAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYVLRASAAKLGSSSSF 288
9630.m04003|protein plasma membrane intrinsic protein BPW1 -
barley
Length = 288
Score = 518 bits (1321), Expect = e-147
Identities = 254/286 (88%), Positives = 266/286 (92%), Gaps = 1/286 (0%)
Frame = +1
Query: 64 MAKDIEA-APPGGEYGAKDYSDPPPAPLFDAEELTKWSLYRAVIAEFVATLLFLYITVAT 240
MAKDIEA AP GGE+ AKDY+DPPPAPL D EELTKWSLYRAVIAEF+ATLLFLYITVAT
Sbjct: 1 MAKDIEASAPEGGEFSAKDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVAT 60
Query: 241 VIGYKHQADPAGPNAADAACSGVGILGIAWAFGGMIFVLVYCTAGVSGGHINPAVTFGLF 420
VIGYKHQ+D A N DAACSGVGILGIAWAFGGMIF+LVYCTAG+SGGHINPAVTFGLF
Sbjct: 61 VIGYKHQSD-ATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLF 119
Query: 421 LARKVSLVRAVLYIIAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEI 600
LARKVSL+RAVLYIIAQCLGAICGVGLVKGFQS++Y RYGGGANELS GYSKGTGL AEI
Sbjct: 120 LARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEI 179
Query: 601 IGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGA 780
IGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGFAVFMVHLATIPITGTGINPARS G
Sbjct: 180 IGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGT 239
Query: 781 AVIYNNEKAWDDHWIFWVGPFIGAAIAAAYHQYVLRASATKLGSSAS 921
AVIYN +KAWDD WIFWVGP IGAAIAAAYHQYVLRASA KLGS S
Sbjct: 240 AVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASAAKLGSYRS 286
9635.m02571|protein MIP family channel proteins, putative
Length = 290
Score = 491 bits (1250), Expect = e-138
Identities = 241/286 (84%), Positives = 260/286 (90%), Gaps = 3/286 (1%)
Frame = +1
Query: 64 MAKD--IEAAPPGGEYGAKDYSDPPPAPLFDAEELTKWSLYRAVIAEFVATLLFLYITVA 237
M KD +E+ GE+ AKDY+DPPPAPL DA EL WSLYRAVIAEF+ATLLFLYITVA
Sbjct: 1 MGKDEVMESGGAAGEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVA 60
Query: 238 TVIGYKHQADPAGPNAADAACSGVGILGIAWAFGGMIFVLVYCTAGVSGGHINPAVTFGL 417
TVIGYKHQ D A + ADAAC GVG+LGIAWAFGGMIF+LVYCTAG+SGGHINPAVTFGL
Sbjct: 61 TVIGYKHQTD-ASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 119
Query: 418 FLARKVSLVRAVLYIIAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAE 597
FLARKVSLVRA+LYI+AQCLGAICGVGLVK FQSA++ RYGGGAN L+AGYSKGTGLAAE
Sbjct: 120 FLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAE 179
Query: 598 IIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFG 777
IIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS G
Sbjct: 180 IIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIG 239
Query: 778 AAVIYNNEKAWDDHWIFWVGPFIGAAIAAAYHQYVLRASATK-LGSSAS 921
AAVI+NNEKAW +HWIFWVGPF+GAAIAA YHQY+LRA A K LGS S
Sbjct: 240 AAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYILRAGAIKALGSFRS 288
9635.m02567|protein MIP family channel proteins, putative
Length = 283
Score = 481 bits (1224), Expect = e-135
Identities = 234/283 (82%), Positives = 251/283 (88%)
Frame = +1
Query: 73 DIEAAPPGGEYGAKDYSDPPPAPLFDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGY 252
D+EA G +DY DPPPAPL D +EL +WSLYRAVIAEFVATLLFLY+TVATVIGY
Sbjct: 6 DVEAG------GVRDYEDPPPAPLVDIDELGRWSLYRAVIAEFVATLLFLYVTVATVIGY 59
Query: 253 KHQADPAGPNAADAACSGVGILGIAWAFGGMIFVLVYCTAGVSGGHINPAVTFGLFLARK 432
KHQ D A + DAAC GVG+LGIAWAFGGMIF+LVYCTAG+SGGHINPAVTFGLFLARK
Sbjct: 60 KHQTD-ASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARK 118
Query: 433 VSLVRAVLYIIAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTF 612
VSLVRA+LYI+AQCLGA+CGV LVKGFQS+FY RYGGGANEL+AGYSKGTGLAAEIIGTF
Sbjct: 119 VSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTF 178
Query: 613 VLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIY 792
VLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS GAAV+Y
Sbjct: 179 VLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVY 238
Query: 793 NNEKAWDDHWIFWVGPFIGAAIAAAYHQYVLRASATKLGSSAS 921
NN KAW D WIFWVGPFIGAAIAA YHQ VLRASA GS S
Sbjct: 239 NNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRASARGYGSFRS 281
9635.m02564|protein MIP family channel proteins, putative
Length = 286
Score = 474 bits (1207), Expect = e-133
Identities = 231/272 (84%), Positives = 244/272 (88%)
Frame = +1
Query: 106 GAKDYSDPPPAPLFDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQADPAGPNA 285
GA+DY DPPPAPL D +EL KWSLYRA+IAEFVATLLFLY+TVATVIGYKHQ D A N
Sbjct: 14 GARDYIDPPPAPLVDVDELGKWSLYRALIAEFVATLLFLYVTVATVIGYKHQTD-AAVNG 72
Query: 286 ADAACSGVGILGIAWAFGGMIFVLVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYII 465
ADAAC GVG+LGIAWAFGGMIF+LVYCTAGVSGGHINPAVT GLFLARKVSLVRA+LY+
Sbjct: 73 ADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMA 132
Query: 466 AQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFSATD 645
AQCLGAICGV LVKGFQS+ Y RYGGGANEL+AGYS GTGLAAEIIGTFVLVYTVFSATD
Sbjct: 133 AQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFSATD 192
Query: 646 PKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWI 825
PKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS G AV+YNN KAW D WI
Sbjct: 193 PKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWI 252
Query: 826 FWVGPFIGAAIAAAYHQYVLRASATKLGSSAS 921
FWVGPFIGAAIAA YHQ +LRASA GS S
Sbjct: 253 FWVGPFIGAAIAALYHQVILRASARGYGSFRS 284
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85574844
Number of Sequences: 59712
Number of extensions: 3048658
Number of successful extensions: 49274
Number of sequences better than 1.0e-10: 56
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 49148
Number of HSP's gapped (non-prelim): 52
length of query: 375
length of database: 26,991,925
effective HSP length: 51
effective length of query: 323
effective length of database: 23,946,613
effective search space: 7734755999
effective search space used: 7734755999
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1230 Members:31 3pri:Y 1e-160
BAA23746.2 HvPIP1;5 [Hordeum vulgare subsp. vulgare]
(1386 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9630.m04319|protein aquaporin 579 e-165
9630.m05755|protein water channel protein RWC3 529 e-150
9632.m04558|protein MIP family channel proteins, putative 412 e-133
9630.m04003|protein plasma membrane intrinsic protein BPW... 400 e-111
9635.m02571|protein MIP family channel proteins, putative 399 e-111
9632.m01476|protein MIP family channel proteins, putative 398 e-110
9632.m04226|protein MIP family channel proteins, putative 397 e-110
9635.m02567|protein MIP family channel proteins, putative 395 e-110
9635.m02564|protein MIP family channel proteins, putative 391 e-108
9630.m04002|protein plasma membrane intrinsic protein BPW... 358 2e-98
9637.m03122|protein MIP family channel proteins, putative 351 1e-96
9631.m06380|protein putative plasma membrane intrinsic pr... 329 8e-90
9638.m02985|protein putative aquaporin 303 3e-82
9630.m04001|protein plasma membrane intrinsic protein BPW... 275 2e-73
9635.m02565|protein Major intrinsic protein, putative 270 3e-72
9629.m07384|protein MIP family channel proteins 136 9e-32
9638.m03093|protein putative beta-tonoplast intrinsic pro... 129 9e-30
9631.m00449|protein tonoplast intrinsic protein, gamma (g... 127 3e-29
9630.m04256|protein MIP family channel proteins 123 5e-28
9634.m02259|protein delta-type tonoplast intrinsic protein 123 7e-28
9630.m04319|protein aquaporin
Length = 289
Score = 579 bits (1476), Expect = e-165
Identities = 277/290 (95%), Positives = 287/290 (98%)
Frame = +3
Query: 192 MEGKEEDVRLGANRYSERQPIGTAAQGGGDDKDYKEPPPAPLFEPGELKSWSFYRAGIAE 371
MEGKEEDVRLGANRYSERQPIGTAAQG GDDKDYKEPPPAPLFEPGELKSWSFYRAGIAE
Sbjct: 1 MEGKEEDVRLGANRYSERQPIGTAAQGAGDDKDYKEPPPAPLFEPGELKSWSFYRAGIAE 60
Query: 372 FIATFLFLYVTVLTVMGVSKAPSKCATVGVQGIAWSFGGMIFALVYCTAGISGGHINPAV 551
F+ATFLFLY+T+LTVMGVSK+ SKCATVG+QGIAWSFGGMIFALVYCTAGISGGHINPAV
Sbjct: 61 FVATFLFLYITILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAV 120
Query: 552 TFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDG 731
TFGLFLARKLSLTRAIFYI+MQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDG
Sbjct: 121 TFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDG 180
Query: 732 LGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 911
LGAEI+GTF+LVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA
Sbjct: 181 LGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 240
Query: 912 RSLGAAIIYNRDHAWNDHWIFWVGPFVGAALAAVYHQVIIRAIPFNKSRS 1061
RSLGAAIIYN+DHAWNDHWIFWVGPFVGAALAA+YHQVIIRAIPF KSRS
Sbjct: 241 RSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRAIPF-KSRS 289
9630.m05755|protein water channel protein RWC3
Length = 288
Score = 529 bits (1348), Expect = e-150
Identities = 253/289 (87%), Positives = 275/289 (94%)
Frame = +3
Query: 192 MEGKEEDVRLGANRYSERQPIGTAAQGGGDDKDYKEPPPAPLFEPGELKSWSFYRAGIAE 371
MEGKEEDVRLGANRY+ERQPIGTAAQG ++KDY+EPP AP+FE EL SWSFYRAGIAE
Sbjct: 1 MEGKEEDVRLGANRYTERQPIGTAAQGA-EEKDYREPPAAPVFEVEELTSWSFYRAGIAE 59
Query: 372 FIATFLFLYVTVLTVMGVSKAPSKCATVGVQGIAWSFGGMIFALVYCTAGISGGHINPAV 551
F+ATFLFLY+++LTVMGV+K+ SKCATVG+QGIAWSFGGMIFALVYCTAGISGGHINPAV
Sbjct: 60 FVATFLFLYISILTVMGVNKSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAV 119
Query: 552 TFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDG 731
TFGLFLARKLSLTRA+FY+ MQCLGAICGAGVVKGFQ+GLYMG+GGGAN V GYTKGDG
Sbjct: 120 TFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTKGDG 179
Query: 732 LGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 911
LGAEI+GTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA
Sbjct: 180 LGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 239
Query: 912 RSLGAAIIYNRDHAWNDHWIFWVGPFVGAALAAVYHQVIIRAIPFNKSR 1058
RSLGAAI+YNR HAW+DHWIFWVGPF+GAALAA+YH V+IRAIPF KSR
Sbjct: 240 RSLGAAIVYNRAHAWHDHWIFWVGPFIGAALAAIYHVVVIRAIPF-KSR 287
9632.m04558|protein MIP family channel proteins, putative
Length = 282
Score = 412 bits (1048), Expect(2) = e-133
Identities = 196/222 (88%), Positives = 210/222 (94%)
Frame = +3
Query: 396 YVTVLTVMGVSKAPSKCATVGVQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLAR 575
Y+T L MGV+ + SKCATVG+QGIAWSFGGMIFALVYCTAGISG HINPAVTFGLFLAR
Sbjct: 62 YITALNAMGVNNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGAHINPAVTFGLFLAR 121
Query: 576 KLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIIGT 755
KLSLTRA+FY++MQCLGAICGAGVVKGFQ+GLY GGGANVVA GYTKGDGLGAEI+GT
Sbjct: 122 KLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGT 181
Query: 756 FVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 935
F+LVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII
Sbjct: 182 FILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 241
Query: 936 YNRDHAWNDHWIFWVGPFVGAALAAVYHQVIIRAIPFNKSRS 1061
YNR HAW+DHWIFWVGPF+GAALAA+YHQV+IRAIPF KSRS
Sbjct: 242 YNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRAIPF-KSRS 282
Score = 85.4 bits (208), Expect(2) = e-133
Identities = 46/60 (76%), Positives = 47/60 (77%)
Frame = +1
Query: 217 GWAPTGTRSGSPSGRRRRAAGTTRTTRSRRRRRSSSPGSSSPGPSTAPASPSSSPPSSSS 396
GW PT +R GS S RRRRA TTRTTRSRRRRR SS GSSS GPSTA SPSS PPSSSS
Sbjct: 3 GWEPTSSRRGSRSARRRRAP-TTRTTRSRRRRRCSSQGSSSRGPSTAQGSPSSWPPSSSS 61
9630.m04003|protein plasma membrane intrinsic protein BPW1 - barley
Length = 288
Score = 400 bits (1017), Expect = e-111
Identities = 193/262 (73%), Positives = 220/262 (83%), Gaps = 10/262 (3%)
Frame = +3
Query: 252 IGTAAQGGGD--DKDYKEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMG- 422
I +A GG+ KDY +PPPAPL + EL WS YRA IAEFIAT LFLY+TV TV+G
Sbjct: 5 IEASAPEGGEFSAKDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGY 64
Query: 423 -------VSKAPSKCATVGVQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKL 581
V+ + C+ VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+
Sbjct: 65 KHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKV 124
Query: 582 SLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIIGTFV 761
SL RA+ YII QCLGAICG G+VKGFQ Y GGGAN ++ GY+KG GLGAEIIGTFV
Sbjct: 125 SLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFV 184
Query: 762 LVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN 941
LVYTVFSATD KRNARDSH+P+LAPLPIGFAVF+VHLATIPITGTGINPARSLG A+IYN
Sbjct: 185 LVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYN 244
Query: 942 RDHAWNDHWIFWVGPFVGAALAAVYHQVIIRA 1037
+D AW+D WIFWVGP +GAA+AA YHQ ++RA
Sbjct: 245 KDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRA 276
9635.m02571|protein MIP family channel proteins, putative
Length = 290
Score = 399 bits (1015), Expect = e-111
Identities = 192/251 (76%), Positives = 215/251 (85%), Gaps = 8/251 (3%)
Frame = +3
Query: 285 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMG--------VSKAPS 440
KDY +PPPAPL + EL SWS YRA IAEFIAT LFLY+TV TV+G S A +
Sbjct: 19 KDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADA 78
Query: 441 KCATVGVQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQC 620
C VGV GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAI YI+ QC
Sbjct: 79 ACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQC 138
Query: 621 LGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 800
LGAICG G+VK FQ + GGGAN +A+GY+KG GL AEIIGTFVLVYTVFSATD KR
Sbjct: 139 LGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKR 198
Query: 801 NARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWV 980
NARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS+GAA+I+N + AW++HWIFWV
Sbjct: 199 NARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHNHWIFWV 258
Query: 981 GPFVGAALAAVYHQVIIRA 1037
GPFVGAA+AA YHQ I+RA
Sbjct: 259 GPFVGAAIAAFYHQYILRA 277
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107176444
Number of Sequences: 59712
Number of extensions: 3968542
Number of successful extensions: 74141
Number of sequences better than 1.0e-10: 56
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 74032
Number of HSP's gapped (non-prelim): 52
length of query: 462
length of database: 26,991,925
effective HSP length: 52
effective length of query: 409
effective length of database: 23,886,901
effective search space: 9769742509
effective search space used: 9769742509
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1238 Members:57 3pri:Y 1e-109
AAD28761.1 plasma membrane intrinsic protein [Zea mays]
gb|AAO86708.1| aquaporin [Zea mays]
(1324 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9632.m04226|protein MIP family channel proteins, putative 531 e-151
9630.m04003|protein plasma membrane intrinsic protein BPW... 514 e-145
9635.m02571|protein MIP family channel proteins, putative 491 e-138
9635.m02567|protein MIP family channel proteins, putative 481 e-135
9635.m02564|protein MIP family channel proteins, putative 476 e-134
9630.m04002|protein plasma membrane intrinsic protein BPW... 458 e-129
9632.m01476|protein MIP family channel proteins, putative 425 e-118
9630.m04319|protein aquaporin 400 e-111
9630.m05755|protein water channel protein RWC3 395 e-110
9637.m03122|protein MIP family channel proteins, putative 388 e-108
9630.m04001|protein plasma membrane intrinsic protein BPW... 374 e-103
9631.m06380|protein putative plasma membrane intrinsic pr... 369 e-102
9632.m04558|protein MIP family channel proteins, putative 338 e-100
9638.m02985|protein putative aquaporin 324 2e-88
9635.m02565|protein Major intrinsic protein, putative 287 3e-77
9629.m07384|protein MIP family channel proteins 155 2e-37
9634.m02259|protein delta-type tonoplast intrinsic protein 143 9e-34
9630.m04256|protein MIP family channel proteins 141 3e-33
9638.m03093|protein putative beta-tonoplast intrinsic pro... 137 4e-32
9632.m04280|protein MIP family channel proteins, putative 127 6e-29
9632.m04226|protein MIP family channel proteins, putative
Length = 290
Score = 531 bits (1354), Expect = e-151
Identities = 265/287 (92%), Positives = 271/287 (94%), Gaps = 2/287 (0%)
Frame = +1
Query: 82 MAKDIEAAPP--GGEYAAKDYSDPPPAPLFDAEELTKWSLYRAVIAEFVATLLFLYITVA 255
MAKDIEAA GGEY AKDYSDPPPAPL DAEELTKWSLYRAVIAEFVATLLFLYITVA
Sbjct: 1 MAKDIEAAAAAEGGEYMAKDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVA 60
Query: 256 TVIGYKHQADPAGPNAADAACSGVGILGIAWAFGGMIFVLVYCTAGVSGGHINPAVTFGL 435
TVIGYKHQ+DP G NAADAACSGVGILGIAWAFGGMIF+LVYCTAGVSGGHINPAVTFGL
Sbjct: 61 TVIGYKHQSDP-GANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGL 119
Query: 436 FLARKVSLVRAVLYIIAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAE 615
FLARKVSLVRAVLYI+AQ LGAICGVGLVKGFQSAFYVRYGGGANELS GYSKGTGLAAE
Sbjct: 120 FLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGLAAE 179
Query: 616 IIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFG 795
IIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS G
Sbjct: 180 IIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLG 239
Query: 796 AAVIYNNEKAWDDHWMFWVGPFIGAAIAALYHQYVLRASATKFGSSASF 942
AAVIYN KAW DHW+FWVGP IGAAIAA YHQYVLRASA K GSS+SF
Sbjct: 240 AAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYVLRASAAKLGSSSSF 288
9630.m04003|protein plasma membrane intrinsic protein BPW1 -
barley
Length = 288
Score = 514 bits (1310), Expect = e-145
Identities = 251/286 (87%), Positives = 265/286 (91%), Gaps = 1/286 (0%)
Frame = +1
Query: 82 MAKDIEA-APPGGEYAAKDYSDPPPAPLFDAEELTKWSLYRAVIAEFVATLLFLYITVAT 258
MAKDIEA AP GGE++AKDY+DPPPAPL D EELTKWSLYRAVIAEF+ATLLFLYITVAT
Sbjct: 1 MAKDIEASAPEGGEFSAKDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVAT 60
Query: 259 VIGYKHQADPAGPNAADAACSGVGILGIAWAFGGMIFVLVYCTAGVSGGHINPAVTFGLF 438
VIGYKHQ+D A N DAACSGVGILGIAWAFGGMIF+LVYCTAG+SGGHINPAVTFGLF
Sbjct: 61 VIGYKHQSD-ATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLF 119
Query: 439 LARKVSLVRAVLYIIAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEI 618
LARKVSL+RAVLYIIAQCLGAICGVGLVKGFQS++Y RYGGGANELS GYSKGTGL AEI
Sbjct: 120 LARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEI 179
Query: 619 IGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGA 798
IGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGFAVFMVHLATIPITGTGINPARS G
Sbjct: 180 IGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGT 239
Query: 799 AVIYNNEKAWDDHWMFWVGPFIGAAIAALYHQYVLRASATKFGSSAS 939
AVIYN +KAWDD W+FWVGP IGAAIAA YHQYVLRASA K GS S
Sbjct: 240 AVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASAAKLGSYRS 286
9635.m02571|protein MIP family channel proteins, putative
Length = 290
Score = 491 bits (1250), Expect = e-138
Identities = 237/280 (84%), Positives = 257/280 (91%), Gaps = 2/280 (0%)
Frame = +1
Query: 82 MAKD--IEAAPPGGEYAAKDYSDPPPAPLFDAEELTKWSLYRAVIAEFVATLLFLYITVA 255
M KD +E+ GE+AAKDY+DPPPAPL DA EL WSLYRAVIAEF+ATLLFLYITVA
Sbjct: 1 MGKDEVMESGGAAGEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVA 60
Query: 256 TVIGYKHQADPAGPNAADAACSGVGILGIAWAFGGMIFVLVYCTAGVSGGHINPAVTFGL 435
TVIGYKHQ D A + ADAAC GVG+LGIAWAFGGMIF+LVYCTAG+SGGHINPAVTFGL
Sbjct: 61 TVIGYKHQTD-ASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 119
Query: 436 FLARKVSLVRAVLYIIAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAE 615
FLARKVSLVRA+LYI+AQCLGAICGVGLVK FQSA++ RYGGGAN L+AGYSKGTGLAAE
Sbjct: 120 FLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAE 179
Query: 616 IIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFG 795
IIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS G
Sbjct: 180 IIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIG 239
Query: 796 AAVIYNNEKAWDDHWMFWVGPFIGAAIAALYHQYVLRASATK 921
AAVI+NNEKAW +HW+FWVGPF+GAAIAA YHQY+LRA A K
Sbjct: 240 AAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYILRAGAIK 281
9635.m02567|protein MIP family channel proteins, putative
Length = 283
Score = 481 bits (1225), Expect = e-135
Identities = 235/283 (83%), Positives = 254/283 (89%)
Frame = +1
Query: 91 DIEAAPPGGEYAAKDYSDPPPAPLFDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGY 270
D+EA GG +DY DPPPAPL D +EL +WSLYRAVIAEFVATLLFLY+TVATVIGY
Sbjct: 6 DVEA---GG---VRDYEDPPPAPLVDIDELGRWSLYRAVIAEFVATLLFLYVTVATVIGY 59
Query: 271 KHQADPAGPNAADAACSGVGILGIAWAFGGMIFVLVYCTAGVSGGHINPAVTFGLFLARK 450
KHQ D A + DAAC GVG+LGIAWAFGGMIF+LVYCTAG+SGGHINPAVTFGLFLARK
Sbjct: 60 KHQTD-ASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARK 118
Query: 451 VSLVRAVLYIIAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTF 630
VSLVRA+LYI+AQCLGA+CGV LVKGFQS+FY RYGGGANEL+AGYSKGTGLAAEIIGTF
Sbjct: 119 VSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTF 178
Query: 631 VLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIY 810
VLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS GAAV+Y
Sbjct: 179 VLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVY 238
Query: 811 NNEKAWDDHWMFWVGPFIGAAIAALYHQYVLRASATKFGSSAS 939
NN KAW D W+FWVGPFIGAAIAALYHQ VLRASA +GS S
Sbjct: 239 NNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRASARGYGSFRS 281
9635.m02564|protein MIP family channel proteins, putative
Length = 286
Score = 476 bits (1211), Expect = e-134
Identities = 233/283 (82%), Positives = 249/283 (87%)
Frame = +1
Query: 91 DIEAAPPGGEYAAKDYSDPPPAPLFDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGY 270
D+ GG A+DY DPPPAPL D +EL KWSLYRA+IAEFVATLLFLY+TVATVIGY
Sbjct: 6 DVSTLEAGG---ARDYIDPPPAPLVDVDELGKWSLYRALIAEFVATLLFLYVTVATVIGY 62
Query: 271 KHQADPAGPNAADAACSGVGILGIAWAFGGMIFVLVYCTAGVSGGHINPAVTFGLFLARK 450
KHQ D A N ADAAC GVG+LGIAWAFGGMIF+LVYCTAGVSGGHINPAVT GLFLARK
Sbjct: 63 KHQTD-AAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARK 121
Query: 451 VSLVRAVLYIIAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTF 630
VSLVRA+LY+ AQCLGAICGV LVKGFQS+ Y RYGGGANEL+AGYS GTGLAAEIIGTF
Sbjct: 122 VSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTF 181
Query: 631 VLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIY 810
VLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS G AV+Y
Sbjct: 182 VLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVY 241
Query: 811 NNEKAWDDHWMFWVGPFIGAAIAALYHQYVLRASATKFGSSAS 939
NN KAW D W+FWVGPFIGAAIAALYHQ +LRASA +GS S
Sbjct: 242 NNNKAWSDQWIFWVGPFIGAAIAALYHQVILRASARGYGSFRS 284
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99158311
Number of Sequences: 59712
Number of extensions: 3510125
Number of successful extensions: 49590
Number of sequences better than 1.0e-10: 57
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 49399
Number of HSP's gapped (non-prelim): 69
length of query: 441
length of database: 26,991,925
effective HSP length: 52
effective length of query: 388
effective length of database: 23,886,901
effective search space: 9268117588
effective search space used: 9268117588
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1242 Members:18 3pri:Y 7e-74
CAA54233.1 transmembrane protein [Hordeum vulgare subsp.
vulgare]
(1751 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9630.m04319|protein aquaporin 354 2e-97
9630.m05755|protein water channel protein RWC3 339 1e-92
9632.m04558|protein MIP family channel proteins, putative 339 1e-92
9635.m02567|protein MIP family channel proteins, putative 294 3e-79
9630.m04003|protein plasma membrane intrinsic protein BPW... 293 9e-79
9632.m04226|protein MIP family channel proteins, putative 291 3e-78
9635.m02571|protein MIP family channel proteins, putative 290 4e-78
9635.m02564|protein MIP family channel proteins, putative 287 5e-77
9632.m01476|protein MIP family channel proteins, putative 284 2e-76
9637.m03122|protein MIP family channel proteins, putative 263 5e-70
9635.m02565|protein Major intrinsic protein, putative 257 3e-68
9638.m02985|protein putative aquaporin 252 1e-66
9630.m04002|protein plasma membrane intrinsic protein BPW... 249 9e-66
9631.m06380|protein putative plasma membrane intrinsic pr... 233 7e-61
9630.m04001|protein plasma membrane intrinsic protein BPW... 168 2e-41
9629.m07384|protein MIP family channel proteins 116 1e-25
9638.m03093|protein putative beta-tonoplast intrinsic pro... 111 3e-24
9634.m02259|protein delta-type tonoplast intrinsic protein 106 2e-22
9631.m00449|protein tonoplast intrinsic protein, gamma (g... 104 6e-22
9632.m04280|protein MIP family channel proteins, putative 103 8e-22
9630.m04319|protein aquaporin
Length = 289
Score = 354 bits (900), Expect = 2e-97
Identities = 166/178 (93%), Positives = 177/178 (99%)
Frame = -3
Query: 1209 SGGHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVV 1030
SGGHINPAVTFGLFLARKLSLTRA+FYI+MQCLGAICGAGVVKGFQQGLYMGNGGGANVV
Sbjct: 112 SGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVV 171
Query: 1029 ASGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP 850
ASGYTKG GLGAEI+GTF+LVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP
Sbjct: 172 ASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP 231
Query: 849 ITGTGINPARSLGAAIIYNREHAWSDHWIFWVGPFIGAALAAIYHQVVIRAIPFKTKS 676
ITGTGINPARSLGAAIIYN++HAW+DHWIFWVGPF+GAALAAIYHQV+IRAIPFK++S
Sbjct: 232 ITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRAIPFKSRS 289
9630.m05755|protein water channel protein RWC3
Length = 288
Score = 339 bits (859), Expect = 1e-92
Identities = 162/177 (91%), Positives = 169/177 (94%)
Frame = -3
Query: 1209 SGGHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVV 1030
SGGHINPAVTFGLFLARKLSLTRAVFY+ MQCLGAICGAGVVKGFQ+GLYMG+GGGAN V
Sbjct: 111 SGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAV 170
Query: 1029 ASGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP 850
GYTKG GLGAEI+GTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP
Sbjct: 171 NPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP 230
Query: 849 ITGTGINPARSLGAAIIYNREHAWSDHWIFWVGPFIGAALAAIYHQVVIRAIPFKTK 679
ITGTGINPARSLGAAI+YNR HAW DHWIFWVGPFIGAALAAIYH VVIRAIPFK++
Sbjct: 231 ITGTGINPARSLGAAIVYNRAHAWHDHWIFWVGPFIGAALAAIYHVVVIRAIPFKSR 287
9632.m04558|protein MIP family channel proteins, putative
Length = 282
Score = 339 bits (859), Expect = 1e-92
Identities = 162/178 (91%), Positives = 170/178 (95%)
Frame = -3
Query: 1209 SGGHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVV 1030
SG HINPAVTFGLFLARKLSLTRA+FY++MQCLGAICGAGVVKGFQ+GLY GGGANVV
Sbjct: 105 SGAHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVV 164
Query: 1029 ASGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP 850
A GYTKG GLGAEI+GTF+LVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP
Sbjct: 165 APGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP 224
Query: 849 ITGTGINPARSLGAAIIYNREHAWSDHWIFWVGPFIGAALAAIYHQVVIRAIPFKTKS 676
ITGTGINPARSLGAAIIYNR HAW DHWIFWVGPFIGAALAAIYHQVVIRAIPFK++S
Sbjct: 225 ITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRAIPFKSRS 282
9635.m02567|protein MIP family channel proteins, putative
Length = 283
Score = 294 bits (745), Expect = 3e-79
Identities = 135/171 (78%), Positives = 153/171 (88%)
Frame = -3
Query: 1209 SGGHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVV 1030
SGGHINPAVTFGLFLARK+SL RA+ YI+ QCLGA+CG +VKGFQ Y GGGAN +
Sbjct: 101 SGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANEL 160
Query: 1029 ASGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP 850
A+GY+KG+GL AEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP
Sbjct: 161 AAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIP 220
Query: 849 ITGTGINPARSLGAAIIYNREHAWSDHWIFWVGPFIGAALAAIYHQVVIRA 697
+TGTGINPARSLGAA++YN AWSD WIFWVGPFIGAA+AA+YHQ+V+RA
Sbjct: 221 VTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRA 271
9630.m04003|protein plasma membrane intrinsic protein BPW1 - barley
Length = 288
Score = 293 bits (741), Expect = 9e-79
Identities = 139/178 (78%), Positives = 153/178 (85%)
Frame = -3
Query: 1209 SGGHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVV 1030
SGGHINPAVTFGLFLARK+SL RAV YII QCLGAICG G+VKGFQ Y GGGAN +
Sbjct: 106 SGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANEL 165
Query: 1029 ASGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP 850
+ GY+KG+GLGAEIIGTFVLVYTVFSATD KRNARDSH+P+LAPLPIGFAVF+VHLATIP
Sbjct: 166 SDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIP 225
Query: 849 ITGTGINPARSLGAAIIYNREHAWSDHWIFWVGPFIGAALAAIYHQVVIRAIPFKTKS 676
ITGTGINPARSLG A+IYN++ AW D WIFWVGP IGAA+AA YHQ V+RA K S
Sbjct: 226 ITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASAAKLGS 283
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126595008
Number of Sequences: 59712
Number of extensions: 4256947
Number of successful extensions: 59382
Number of sequences better than 1.0e-10: 47
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 59320
Number of HSP's gapped (non-prelim): 40
length of query: 583
length of database: 26,991,925
effective HSP length: 52
effective length of query: 531
effective length of database: 23,886,901
effective search space: 12683944431
effective search space used: 12683944431
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 161 (67.1 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1243 Members:63 3pri:Y 1e-80
CAE02874.1 OSJNBb0022F23.11 [Oryza sativa (japonica
cultivar-group)]
(982 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9630.m03628|protein protein 60S ribosomal protein L6 F2P9... 386 e-107
9632.m03766|protein protein 60S ribosomal protein L6 F2P9... 380 e-105
9630.m03628|protein protein 60S ribosomal protein L6 F2P9.8
[imported] - Arabidopsis thaliana
Length = 219
Score = 386 bits (982), Expect = e-107
Identities = 189/219 (86%), Positives = 203/219 (92%)
Frame = +2
Query: 56 MAPTSKMALGIKRTSRSRTYHRRGLWAIKAKHGGAFPKAEKPAAVAEPKFYPADDVKPRT 235
MAPTSK++ GIKR SRS TYHRRGLWAIKAK+GG FPKA KPAA AEPKFYPADDVKPR
Sbjct: 1 MAPTSKLSQGIKRASRSHTYHRRGLWAIKAKNGGTFPKAGKPAAAAEPKFYPADDVKPRA 60
Query: 236 FSTRKPHPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRV 415
STRK +PTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRV
Sbjct: 61 PSTRKANPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRV 120
Query: 416 NQAYVISTSTRLDISKVNMQKFDDKYFAREKKTRAKKSEGELFESEKEATKNLPDFKKDD 595
NQAYVI+TST++DIS V + KFDDKYFAR+KK +AKK+EGELFE+EKEATKNLPDFKKDD
Sbjct: 121 NQAYVIATSTKVDISGVKVDKFDDKYFARDKKAKAKKTEGELFETEKEATKNLPDFKKDD 180
Query: 596 QKVIDTELIKAIDAVPDLKSYLGARFSLRDGDKPHEMTF 712
QK +D ELIKAI+ VPDLKSYLGARFSLRDGDKPHEMTF
Sbjct: 181 QKAVDAELIKAIEVVPDLKSYLGARFSLRDGDKPHEMTF 219
9632.m03766|protein protein 60S ribosomal protein L6 F2P9.8
[imported] - Arabidopsis thaliana
Length = 222
Score = 380 bits (966), Expect = e-105
Identities = 185/219 (84%), Positives = 207/219 (94%), Gaps = 3/219 (1%)
Frame = +2
Query: 56 MAPTSKMALGIKRTSRSRTYHRRGLWAIKAKHGGAFPKAEKPAAVAE---PKFYPADDVK 226
MAPTSK++ GIK+ SRS TYHRRGLWAIKAKHGGAFPKAEKPAA A PKFYPADDVK
Sbjct: 1 MAPTSKLSQGIKKASRSHTYHRRGLWAIKAKHGGAFPKAEKPAAAAAAAAPKFYPADDVK 60
Query: 227 PRTFSTRKPHPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPI 406
PR STRKP+PTKLRS+ITPGTVLILLAGR+MGKRVVFLKQLKSGLLL+TGPFKINGVPI
Sbjct: 61 PRQPSTRKPNPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLVTGPFKINGVPI 120
Query: 407 RRVNQAYVISTSTRLDISKVNMQKFDDKYFAREKKTRAKKSEGELFESEKEATKNLPDFK 586
RRVNQ YVI+TST++DIS VN++KFDDKYF+R+KK +AKK+EGELFE+EKEATKNLP+FK
Sbjct: 121 RRVNQPYVIATSTKVDISGVNVEKFDDKYFSRDKKQKAKKTEGELFETEKEATKNLPEFK 180
Query: 587 KDDQKVIDTELIKAIDAVPDLKSYLGARFSLRDGDKPHEMTF 712
K+DQKV+D ELIKAI+AVPDLK+YLGARFSLRDGDKPHEM F
Sbjct: 181 KEDQKVVDAELIKAIEAVPDLKTYLGARFSLRDGDKPHEMVF 222
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61014650
Number of Sequences: 59712
Number of extensions: 1736428
Number of successful extensions: 21663
Number of sequences better than 1.0e-10: 4
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21660
Number of HSP's gapped (non-prelim): 2
length of query: 327
length of database: 26,991,925
effective HSP length: 51
effective length of query: 275
effective length of database: 23,946,613
effective search space: 6585318575
effective search space used: 6585318575
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1247 Members:157 3pri:Y 1e-121
T03911 r40c1 protein - rice emb|CAA64683.1| osr40c1 [Oryza
sativa]
(1439 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m02098|protein r40c1 protein - rice 666 0.0
9635.m04894|protein r40g2 protein - rice (fragment) 578 e-165
9635.m04891|protein Similar to r40g3 protein - rice 484 e-136
9635.m04895|protein r40g3 protein - rice 268 2e-71
9629.m00047|protein expressed protein 253 5e-67
9631.m02086|protein QXW lectin repeat, putative 252 1e-66
9631.m02084|protein hypothetical protein 140 6e-33
9629.m00408|protein expressed protein 81 6e-15
9631.m06019|protein expressed protein 80 1e-14
9633.m00504|protein dna-directed rna polymerase ii larges... 78 4e-14
9636.m00525|protein dna-directed rna polymerase ii larges... 74 7e-13
9629.m05120|protein retrotransposon protein, putative, Ty... 72 3e-12
9636.m00235|protein hypothetical protein 72 3e-12
9639.m04036|protein transposon protein, putative, CACTA, ... 71 5e-12
9631.m03557|protein putative protein kinase 70 8e-12
9629.m00111|protein transposon protein, putative, CACTA, ... 69 2e-11
9629.m00112|protein transposon protein, putative, CACTA, ... 69 2e-11
9640.m03456|protein Similar to extensin-like protein - maize 69 2e-11
9633.m03752|protein retrotransposon protein, putative, un... 67 7e-11
9638.m02460|protein retrotransposon protein, putative, un... 67 9e-11
9631.m02098|protein r40c1 protein - rice
Length = 348
Score = 666 bits (1701), Expect = 0.0
Identities = 298/347 (85%), Positives = 325/347 (92%), Gaps = 2/347 (0%)
Frame = +1
Query: 70 MFGFGHHGHHGQN-PPAHAPPAAGG-NQPTFKIFCKADEGYCLSVRDGNVVLAPSNPRDE 243
MFGFGHHGHHGQ+ PP H GG +QPTFKIFC+ADEGYC++VR+GNVVLAP+NPRDE
Sbjct: 1 MFGFGHHGHHGQDQPPQHHGGGGGGAHQPTFKIFCRADEGYCVAVREGNVVLAPTNPRDE 60
Query: 244 HQHWFKDMRFSTQIKDEEGNPAFAIVNKATGLAVKHSLGQSHPVKLVPFNPEFLDESVMW 423
HQHW+KDMRFS +IKDEEGNPAFA+VNKATGLA+KHSLGQ HPVKL PFNPE+ DESV+W
Sbjct: 61 HQHWYKDMRFSAKIKDEEGNPAFALVNKATGLAIKHSLGQGHPVKLAPFNPEYPDESVLW 120
Query: 424 TESGDVGKGFRCIRMVNNIRLNFDALNGDKDHGGVHDGTTVVLWEWAKGDNQSWKILPWG 603
TESGDVGK FRCIRM+NNIRLNFDA +GDKDHGGVHDGTT+VLWEWAKGDNQ WKILPWG
Sbjct: 121 TESGDVGKSFRCIRMLNNIRLNFDAFHGDKDHGGVHDGTTIVLWEWAKGDNQCWKILPWG 180
Query: 604 EEAYAGGSANAPRGGSSEPTVRIFCKADEGFSATVRNGTVVLAPSNPRDEYQHWFKDMRH 783
+EAYAGGSANAPRGG +EPTVRIFCKADEGFS TVR G+V LAP+NPRDEYQHW KDMRH
Sbjct: 181 DEAYAGGSANAPRGG-NEPTVRIFCKADEGFSVTVRGGSVCLAPTNPRDEYQHWIKDMRH 239
Query: 784 SNRIKDEEGYPAFALINKVTGEALKHSQGEGHPVKLVPYNPNYQDESVLWTESRDVGAGF 963
SN IKDEEGYPAFAL+N+VTGEA+KHSQGEGHPVKLVPYNP YQDESVLWTESRDVG GF
Sbjct: 240 SNSIKDEEGYPAFALVNRVTGEAIKHSQGEGHPVKLVPYNPGYQDESVLWTESRDVGHGF 299
Query: 964 RCIRMVNNIYLNFDALHGDKEHGGVRDGTSLVLWKWCEGDNQRWKILPW 1110
RCIRMVNNIYLNFDALHGDK+HGGVRDGT++ LWKWCEGDNQRWKI+PW
Sbjct: 300 RCIRMVNNIYLNFDALHGDKDHGGVRDGTTVALWKWCEGDNQRWKIVPW 348
9635.m04894|protein r40g2 protein - rice (fragment)
Length = 343
Score = 578 bits (1474), Expect = e-165
Identities = 267/347 (76%), Positives = 293/347 (83%), Gaps = 3/347 (0%)
Frame = +1
Query: 70 MFGFGHHGHHGQNPPAHAPPAAGGNQPTFKIFCKADEGYCLSVRDGNVVLAPSNPRDEHQ 249
MFGFGHH H Q P A + P NQ FKIFC+A+E YCL+VRD VVLAP NP+DEHQ
Sbjct: 1 MFGFGHH--HNQAPAAPSDP----NQ-IFKIFCRANENYCLTVRDSAVVLAPVNPKDEHQ 53
Query: 250 HWFKDMRFSTQIKDEEGNPAFAIVNKATGLAVKHSLGQSHPVKLVPFNPEFLDESVMWTE 429
HWFKDMRFST++KD EG PAFA+VNKATGLAVKHSLGQSHPVKLVPFNPE+ D SV+WTE
Sbjct: 54 HWFKDMRFSTKVKDGEGMPAFALVNKATGLAVKHSLGQSHPVKLVPFNPEYEDASVLWTE 113
Query: 430 SGDVGKGFRCIRMVNNIRLNFDALNGDKDHGGVHDGTTVVLWEWAKGDNQSWKILPWGEE 609
S DVGKGFRCIRMVNN RLN DA +GDKDHGGV DGTTVVLWEW KGDNQSWKILPWG E
Sbjct: 114 SKDVGKGFRCIRMVNNTRLNLDAFHGDKDHGGVRDGTTVVLWEWCKGDNQSWKILPWGPE 173
Query: 610 AYA---GGSANAPRGGSSEPTVRIFCKADEGFSATVRNGTVVLAPSNPRDEYQHWFKDMR 780
A++ G + GG TVR+F A E + TVRNGT LAP NPRD+YQHW KDMR
Sbjct: 174 AHSSSPGAATACTIGGVPVHTVRVFSAAGEDYCLTVRNGTACLAPKNPRDDYQHWIKDMR 233
Query: 781 HSNRIKDEEGYPAFALINKVTGEALKHSQGEGHPVKLVPYNPNYQDESVLWTESRDVGAG 960
HSN+I+DEEGYPAFAL+NKVTGEA+KHS G+GHPVKLVPYNP YQDESVLWTES+DVG G
Sbjct: 234 HSNKIRDEEGYPAFALVNKVTGEAIKHSTGQGHPVKLVPYNPEYQDESVLWTESKDVGKG 293
Query: 961 FRCIRMVNNIYLNFDALHGDKEHGGVRDGTSLVLWKWCEGDNQRWKILPW 1110
FRCIRMVNNIYLNFDA HGDK+HGG+ DGT +VLWKWCEGDNQRWKILPW
Sbjct: 294 FRCIRMVNNIYLNFDAFHGDKDHGGIHDGTEIVLWKWCEGDNQRWKILPW 343
Score = 253 bits (640), Expect = 5e-67
Identities = 113/178 (63%), Positives = 134/178 (74%)
Frame = +1
Query: 67 RMFGFGHHGHHGQNPPAHAPPAAGGNQPTFKIFCKADEGYCLSVRDGNVVLAPSNPRDEH 246
++ +G H A A G T ++F A E YCL+VR+G LAP NPRD++
Sbjct: 166 KILPWGPEAHSSSPGAATACTIGGVPVHTVRVFSAAGEDYCLTVRNGTACLAPKNPRDDY 225
Query: 247 QHWFKDMRFSTQIKDEEGNPAFAIVNKATGLAVKHSLGQSHPVKLVPFNPEFLDESVMWT 426
QHW KDMR S +I+DEEG PAFA+VNK TG A+KHS GQ HPVKLVP+NPE+ DESV+WT
Sbjct: 226 QHWIKDMRHSNKIRDEEGYPAFALVNKVTGEAIKHSTGQGHPVKLVPYNPEYQDESVLWT 285
Query: 427 ESGDVGKGFRCIRMVNNIRLNFDALNGDKDHGGVHDGTTVVLWEWAKGDNQSWKILPW 600
ES DVGKGFRCIRMVNNI LNFDA +GDKDHGG+HDGT +VLW+W +GDNQ WKILPW
Sbjct: 286 ESKDVGKGFRCIRMVNNIYLNFDAFHGDKDHGGIHDGTEIVLWKWCEGDNQRWKILPW 343
9635.m04891|protein Similar to r40g3 protein - rice
Length = 346
Score = 484 bits (1232), Expect = e-136
Identities = 226/288 (78%), Positives = 254/288 (87%), Gaps = 57/288 (19%)
Frame = +1
Query: 247 QHWFKDMRFSTQIKDEEGNPAFAIVNKATGLAVKHSLGQSHPVKLVPFNPEFLDESVMWT 426
QHW+KDMR ST++KDEEG+PAFA+VN+ATGLAVKHSLGQSHPVKLVP+NPE+ DESV+WT
Sbjct: 2 QHWYKDMRHSTRVKDEEGHPAFALVNRATGLAVKHSLGQSHPVKLVPYNPEYQDESVLWT 61
Query: 427 ESGDVGKGFRCIRMVNNIRLNFDALNGDKDHGGVHDGTTVVLWEWAKGDNQSWKILPW-- 600
ES DVG GFRCIRMVNNI LN DA +GDK HGGVHDGTTVVLWEW KGDNQ WKILPW
Sbjct: 62 ESKDVGHGFRCIRMVNNIYLNLDAFHGDKSHGGVHDGTTVVLWEWCKGDNQCWKILPWGP 121
Query: 601 -----------GEEAY-------------------------------------------- 615
G +AY
Sbjct: 122 EAYAPPPPPAYGHQAYPPPPPNREPGHGYHPAPAFYPPQPPPSHDEPGYGYRPPPVGPPG 181
Query: 616 AGGSANAPRGGSSEPTVRIFCKADEGFSATVRNGTVVLAPSNPRDEYQHWFKDMRHSNRI 795
AG PR +SEPTVRI C+ADE +S TVRNG V LAP+NPRD++QHW KDMRHS I
Sbjct: 182 AGYGNRLPRALASEPTVRILCRADEAYSLTVRNGAVCLAPTNPRDDFQHWVKDMRHSTSI 241
Query: 796 KDEEGYPAFALINKVTGEALKHSQGEGHPVKLVPYNPNYQDESVLWTESRDVGAGFRCIR 975
KDEEGYPAFAL+NK TGEA+KHS G+ HPV+LVPYNP Y DESVLWTES+DVG GFRC+R
Sbjct: 242 KDEEGYPAFALVNKATGEAIKHSLGQSHPVRLVPYNPEYLDESVLWTESKDVGHGFRCVR 301
Query: 976 MVNNIYLNFDALHGDKEHGGVRDGTSLVLWKWCEGDNQRWKILPW 1110
MVNNIYLNFDA HGDK+HGGV DGT++VLW+WC+GDNQRWKILPW
Sbjct: 302 MVNNIYLNFDAFHGDKDHGGVHDGTTVVLWEWCKGDNQRWKILPW 346
Score = 280 bits (708), Expect = 5e-75
Identities = 130/184 (70%), Positives = 149/184 (80%), Gaps = 9/184 (4%)
Frame = +1
Query: 49 KPPRDHRMFGFGHHGHHGQNPPAHAPPAAG---------GNQPTFKIFCKADEGYCLSVR 201
+PP H G+G+ PP PP AG ++PT +I C+ADE Y L+VR
Sbjct: 160 QPPPSHDEPGYGYR------PPPVGPPGAGYGNRLPRALASEPTVRILCRADEAYSLTVR 213
Query: 202 DGNVVLAPSNPRDEHQHWFKDMRFSTQIKDEEGNPAFAIVNKATGLAVKHSLGQSHPVKL 381
+G V LAP+NPRD+ QHW KDMR ST IKDEEG PAFA+VNKATG A+KHSLGQSHPV+L
Sbjct: 214 NGAVCLAPTNPRDDFQHWVKDMRHSTSIKDEEGYPAFALVNKATGEAIKHSLGQSHPVRL 273
Query: 382 VPFNPEFLDESVMWTESGDVGKGFRCIRMVNNIRLNFDALNGDKDHGGVHDGTTVVLWEW 561
VP+NPE+LDESV+WTES DVG GFRC+RMVNNI LNFDA +GDKDHGGVHDGTTVVLWEW
Sbjct: 274 VPYNPEYLDESVLWTESKDVGHGFRCVRMVNNIYLNFDAFHGDKDHGGVHDGTTVVLWEW 333
Query: 562 AKGDNQSWKILPW 600
KGDNQ WKILPW
Sbjct: 334 CKGDNQRWKILPW 346
9635.m04895|protein r40g3 protein - rice
Length = 204
Score = 268 bits (678), Expect = 2e-71
Identities = 115/152 (75%), Positives = 132/152 (86%)
Frame = +1
Query: 655 EPTVRIFCKADEGFSATVRNGTVVLAPSNPRDEYQHWFKDMRHSNRIKDEEGYPAFALIN 834
+PTV+++C+A+ ++ T RNG VVLAP+NP+DEYQHW KDMR S IKDEEGYPAFAL+N
Sbjct: 52 QPTVKVYCRANPNYAMTARNGAVVLAPANPKDEYQHWIKDMRWSTSIKDEEGYPAFALVN 111
Query: 835 KVTGEALKHSQGEGHPVKLVPYNPNYQDESVLWTESRDVGAGFRCIRMVNNIYLNFDALH 1014
K TG+A+KHS G+ HPV+LVPYNP DESVLWTESRDVG GFRCIRMVNNIYLNFDA H
Sbjct: 112 KATGQAIKHSLGQSHPVRLVPYNPEVMDESVLWTESRDVGNGFRCIRMVNNIYLNFDAFH 171
Query: 1015 GDKEHGGVRDGTSLVLWKWCEGDNQRWKILPW 1110
GDK HGGVRDGT +VLWKWCEGDNQRWKI P+
Sbjct: 172 GDKYHGGVRDGTDIVLWKWCEGDNQRWKIQPY 203
Score = 252 bits (636), Expect = 1e-66
Identities = 118/175 (67%), Positives = 143/175 (81%), Gaps = 17/175 (9%)
Frame = +1
Query: 76 GFGHHGHHGQ-NPPAHAPPAAGGN----------------QPTFKIFCKADEGYCLSVRD 204
G+G +G G P +AP A G QPT K++C+A+ Y ++ R+
Sbjct: 12 GYGGYGGGGALATPGYAPAAPYGMSQVNIEGNGCGRTLPPQPTVKVYCRANPNYAMTARN 71
Query: 205 GNVVLAPSNPRDEHQHWFKDMRFSTQIKDEEGNPAFAIVNKATGLAVKHSLGQSHPVKLV 384
G VVLAP+NP+DE+QHW KDMR+ST IKDEEG PAFA+VNKATG A+KHSLGQSHPV+LV
Sbjct: 72 GAVVLAPANPKDEYQHWIKDMRWSTSIKDEEGYPAFALVNKATGQAIKHSLGQSHPVRLV 131
Query: 385 PFNPEFLDESVMWTESGDVGKGFRCIRMVNNIRLNFDALNGDKDHGGVHDGTTVVLWEWA 564
P+NPE +DESV+WTES DVG GFRCIRMVNNI LNFDA +GDK HGGV DGT +VLW+W
Sbjct: 132 PYNPEVMDESVLWTESRDVGNGFRCIRMVNNIYLNFDAFHGDKYHGGVRDGTDIVLWKWC 191
Query: 565 KGDNQSWKILPW 600
+GDNQ WKI P+
Sbjct: 192 EGDNQRWKIQPY 203
9629.m00047|protein expressed protein
Length = 268
Score = 253 bits (640), Expect = 5e-67
Identities = 114/156 (73%), Positives = 131/156 (83%), Gaps = 1/156 (0%)
Frame = +1
Query: 643 GGSSEPTVRIFCKADE-GFSATVRNGTVVLAPSNPRDEYQHWFKDMRHSNRIKDEEGYPA 819
GG+ T RI+CKA E +S VR+G V L S+ D QHW KDM++S R+KDEEGYPA
Sbjct: 112 GGAPPVTHRIYCKAGEDNYSLAVRDGKVCLVRSDRDDHTQHWVKDMKYSTRVKDEEGYPA 171
Query: 820 FALINKVTGEALKHSQGEGHPVKLVPYNPNYQDESVLWTESRDVGAGFRCIRMVNNIYLN 999
AL+NK TG+ALKHS G+ HPV+LV YNP Y DESVLWTESRDVG+GFRCIRMVNNIYLN
Sbjct: 172 MALVNKATGDALKHSIGQSHPVRLVRYNPEYMDESVLWTESRDVGSGFRCIRMVNNIYLN 231
Query: 1000 FDALHGDKEHGGVRDGTSLVLWKWCEGDNQRWKILPW 1110
FDALHGDK+HGGVRDGT+LVLW+WCEGDNQRWKI+PW
Sbjct: 232 FDALHGDKDHGGVRDGTTLVLWEWCEGDNQRWKIVPW 268
Score = 240 bits (605), Expect = 6e-63
Identities = 111/159 (69%), Positives = 131/159 (81%), Gaps = 3/159 (1%)
Frame = +1
Query: 124 PPAAGGNQP--TFKIFCKADE-GYCLSVRDGNVVLAPSNPRDEHQHWFKDMRFSTQIKDE 294
P GG P T +I+CKA E Y L+VRDG V L S+ D QHW KDM++ST++KDE
Sbjct: 107 PYHGGGGAPPVTHRIYCKAGEDNYSLAVRDGKVCLVRSDRDDHTQHWVKDMKYSTRVKDE 166
Query: 295 EGNPAFAIVNKATGLAVKHSLGQSHPVKLVPFNPEFLDESVMWTESGDVGKGFRCIRMVN 474
EG PA A+VNKATG A+KHS+GQSHPV+LV +NPE++DESV+WTES DVG GFRCIRMVN
Sbjct: 167 EGYPAMALVNKATGDALKHSIGQSHPVRLVRYNPEYMDESVLWTESRDVGSGFRCIRMVN 226
Query: 475 NIRLNFDALNGDKDHGGVHDGTTVVLWEWAKGDNQSWKILPW 600
NI LNFDAL+GDKDHGGV DGTT+VLWEW +GDNQ WKI+PW
Sbjct: 227 NIYLNFDALHGDKDHGGVRDGTTLVLWEWCEGDNQRWKIVPW 268
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107768233
Number of Sequences: 59712
Number of extensions: 3824287
Number of successful extensions: 78099
Number of sequences better than 1.0e-10: 40
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 77119
Number of HSP's gapped (non-prelim): 154
length of query: 479
length of database: 26,991,925
effective HSP length: 52
effective length of query: 427
effective length of database: 23,886,901
effective search space: 10199706727
effective search space used: 10199706727
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1249 Members:72 3pri:Y 1e-102
T03962 r40g3 protein - rice emb|CAA70175.1| osr40g3 [Oryza
sativa (indica cultivar-group)]
(861 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9635.m04895|protein r40g3 protein - rice 373 e-103
9635.m04891|protein Similar to r40g3 protein - rice 281 1e-75
9631.m02098|protein r40c1 protein - rice 265 1e-70
9635.m04894|protein r40g2 protein - rice (fragment) 259 5e-69
9629.m00047|protein expressed protein 250 2e-66
9631.m02086|protein QXW lectin repeat, putative 149 7e-36
9631.m02084|protein hypothetical protein 131 2e-30
9635.m04895|protein r40g3 protein - rice
Length = 204
Score = 373 bits (947), Expect = e-103
Identities = 166/191 (86%), Positives = 180/191 (93%), Gaps = 7/191 (3%)
Frame = -2
Query: 851 RESYGSYG-------MATPGYAPPVPYGMSQVNVDGNCGGRPMPPQPTVKIYCRANPNYA 693
RE YG YG +ATPGYAP PYGMSQVN++GN GR +PPQPTVK+YCRANPNYA
Sbjct: 7 REQYGGYGGYGGGGALATPGYAPAAPYGMSQVNIEGNGCGRTLPPQPTVKVYCRANPNYA 66
Query: 692 MSVRNGKVVLAPANPKDDYQHWIKDMRWSTSIKDEEGYPAFAIVNKATGQAIKHSLGQSH 513
M+ RNG VVLAPANPKD+YQHWIKDMRWSTSIKDEEGYPAFA+VNKATGQAIKHSLGQSH
Sbjct: 67 MTARNGAVVLAPANPKDEYQHWIKDMRWSTSIKDEEGYPAFALVNKATGQAIKHSLGQSH 126
Query: 512 PVRLVPYNPDFLDESVLWTESRDVGNGFRCVRMVNNIYLNFDALNGDKYHGGVRDGTEVV 333
PVRLVPYNP+ +DESVLWTESRDVGNGFRC+RMVNNIYLNFDA +GDKYHGGVRDGT++V
Sbjct: 127 PVRLVPYNPEVMDESVLWTESRDVGNGFRCIRMVNNIYLNFDAFHGDKYHGGVRDGTDIV 186
Query: 332 LWKWCEGDNQRWKIQPYY 279
LWKWCEGDNQRWKIQPYY
Sbjct: 187 LWKWCEGDNQRWKIQPYY 204
9635.m04891|protein Similar to r40g3 protein - rice
Length = 346
Score = 281 bits (712), Expect = 1e-75
Identities = 130/178 (73%), Positives = 150/178 (84%)
Frame = -2
Query: 815 GYAPPVPYGMSQVNVDGNCGGRPMPPQPTVKIYCRANPNYAMSVRNGKVVLAPANPKDDY 636
GY PP P G GN R + +PTV+I CRA+ Y+++VRNG V LAP NP+DD+
Sbjct: 171 GYRPP-PVGPPGAGY-GNRLPRALASEPTVRILCRADEAYSLTVRNGAVCLAPTNPRDDF 228
Query: 635 QHWIKDMRWSTSIKDEEGYPAFAIVNKATGQAIKHSLGQSHPVRLVPYNPDFLDESVLWT 456
QHW+KDMR STSIKDEEGYPAFA+VNKATG+AIKHSLGQSHPVRLVPYNP++LDESVLWT
Sbjct: 229 QHWVKDMRHSTSIKDEEGYPAFALVNKATGEAIKHSLGQSHPVRLVPYNPEYLDESVLWT 288
Query: 455 ESRDVGNGFRCVRMVNNIYLNFDALNGDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPY 282
ES+DVG+GFRCVRMVNNIYLNFDA +GDK HGGV DGT VVLW+WC+GDNQRWKI P+
Sbjct: 289 ESKDVGHGFRCVRMVNNIYLNFDAFHGDKDHGGVHDGTTVVLWEWCKGDNQRWKILPW 346
Score = 212 bits (533), Expect = 9e-55
Identities = 91/118 (77%), Positives = 106/118 (89%)
Frame = -2
Query: 635 QHWIKDMRWSTSIKDEEGYPAFAIVNKATGQAIKHSLGQSHPVRLVPYNPDFLDESVLWT 456
QHW KDMR ST +KDEEG+PAFA+VN+ATG A+KHSLGQSHPV+LVPYNP++ DESVLWT
Sbjct: 2 QHWYKDMRHSTRVKDEEGHPAFALVNRATGLAVKHSLGQSHPVKLVPYNPEYQDESVLWT 61
Query: 455 ESRDVGNGFRCVRMVNNIYLNFDALNGDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPY 282
ES+DVG+GFRC+RMVNNIYLN DA +GDK HGGV DGT VVLW+WC+GDNQ WKI P+
Sbjct: 62 ESKDVGHGFRCIRMVNNIYLNLDAFHGDKSHGGVHDGTTVVLWEWCKGDNQCWKILPW 119
9631.m02098|protein r40c1 protein - rice
Length = 348
Score = 265 bits (669), Expect = 1e-70
Identities = 114/152 (75%), Positives = 135/152 (88%)
Frame = -2
Query: 737 QPTVKIYCRANPNYAMSVRNGKVVLAPANPKDDYQHWIKDMRWSTSIKDEEGYPAFAIVN 558
+PTV+I+C+A+ ++++VR G V LAP NP+D+YQHWIKDMR S SIKDEEGYPAFA+VN
Sbjct: 197 EPTVRIFCKADEGFSVTVRGGSVCLAPTNPRDEYQHWIKDMRHSNSIKDEEGYPAFALVN 256
Query: 557 KATGQAIKHSLGQSHPVRLVPYNPDFLDESVLWTESRDVGNGFRCVRMVNNIYLNFDALN 378
+ TG+AIKHS G+ HPV+LVPYNP + DESVLWTESRDVG+GFRC+RMVNNIYLNFDAL+
Sbjct: 257 RVTGEAIKHSQGEGHPVKLVPYNPGYQDESVLWTESRDVGHGFRCIRMVNNIYLNFDALH 316
Query: 377 GDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPY 282
GDK HGGVRDGT V LWKWCEGDNQRWKI P+
Sbjct: 317 GDKDHGGVRDGTTVALWKWCEGDNQRWKIVPW 348
Score = 242 bits (612), Expect = 5e-64
Identities = 108/159 (67%), Positives = 128/159 (79%)
Frame = -2
Query: 758 GGRPMPPQPTVKIYCRANPNYAMSVRNGKVVLAPANPKDDYQHWIKDMRWSTSIKDEEGY 579
GG QPT KI+CRA+ Y ++VR G VVLAP NP+D++QHW KDMR+S IKDEEG
Sbjct: 21 GGGGGAHQPTFKIFCRADEGYCVAVREGNVVLAPTNPRDEHQHWYKDMRFSAKIKDEEGN 80
Query: 578 PAFAIVNKATGQAIKHSLGQSHPVRLVPYNPDFLDESVLWTESRDVGNGFRCVRMVNNIY 399
PAFA+VNKATG AIKHSLGQ HPV+L P+NP++ DESVLWTES DVG FRC+RM+NNI
Sbjct: 81 PAFALVNKATGLAIKHSLGQGHPVKLAPFNPEYPDESVLWTESGDVGKSFRCIRMLNNIR 140
Query: 398 LNFDALNGDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPY 282
LNFDA +GDK HGGV DGT +VLW+W +GDNQ WKI P+
Sbjct: 141 LNFDAFHGDKDHGGVHDGTTIVLWEWAKGDNQCWKILPW 179
9635.m04894|protein r40g2 protein - rice (fragment)
Length = 343
Score = 259 bits (655), Expect = 5e-69
Identities = 111/153 (72%), Positives = 130/153 (84%)
Frame = -2
Query: 740 PQPTVKIYCRANPNYAMSVRNGKVVLAPANPKDDYQHWIKDMRWSTSIKDEEGYPAFAIV 561
P TV+++ A +Y ++VRNG LAP NP+DDYQHWIKDMR S I+DEEGYPAFA+V
Sbjct: 191 PVHTVRVFSAAGEDYCLTVRNGTACLAPKNPRDDYQHWIKDMRHSNKIRDEEGYPAFALV 250
Query: 560 NKATGQAIKHSLGQSHPVRLVPYNPDFLDESVLWTESRDVGNGFRCVRMVNNIYLNFDAL 381
NK TG+AIKHS GQ HPV+LVPYNP++ DESVLWTES+DVG GFRC+RMVNNIYLNFDA
Sbjct: 251 NKVTGEAIKHSTGQGHPVKLVPYNPEYQDESVLWTESKDVGKGFRCIRMVNNIYLNFDAF 310
Query: 380 NGDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPY 282
+GDK HGG+ DGTE+VLWKWCEGDNQRWKI P+
Sbjct: 311 HGDKDHGGIHDGTEIVLWKWCEGDNQRWKILPW 343
Score = 250 bits (631), Expect = 3e-66
Identities = 109/156 (69%), Positives = 129/156 (81%)
Frame = -2
Query: 749 PMPPQPTVKIYCRANPNYAMSVRNGKVVLAPANPKDDYQHWIKDMRWSTSIKDEEGYPAF 570
P P KI+CRAN NY ++VR+ VVLAP NPKD++QHW KDMR+ST +KD EG PAF
Sbjct: 15 PSDPNQIFKIFCRANENYCLTVRDSAVVLAPVNPKDEHQHWFKDMRFSTKVKDGEGMPAF 74
Query: 569 AIVNKATGQAIKHSLGQSHPVRLVPYNPDFLDESVLWTESRDVGNGFRCVRMVNNIYLNF 390
A+VNKATG A+KHSLGQSHPV+LVP+NP++ D SVLWTES+DVG GFRC+RMVNN LN
Sbjct: 75 ALVNKATGLAVKHSLGQSHPVKLVPFNPEYEDASVLWTESKDVGKGFRCIRMVNNTRLNL 134
Query: 389 DALNGDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPY 282
DA +GDK HGGVRDGT VVLW+WC+GDNQ WKI P+
Sbjct: 135 DAFHGDKDHGGVRDGTTVVLWEWCKGDNQSWKILPW 170
9629.m00047|protein expressed protein
Length = 268
Score = 250 bits (632), Expect = 2e-66
Identities = 113/159 (71%), Positives = 137/159 (86%), Gaps = 1/159 (0%)
Frame = -2
Query: 758 GGRPMPPQPTVKIYCRANP-NYAMSVRNGKVVLAPANPKDDYQHWIKDMRWSTSIKDEEG 582
GG PP T +IYC+A NY+++VR+GKV L ++ D QHW+KDM++ST +KDEEG
Sbjct: 110 GGGGAPPV-THRIYCKAGEDNYSLAVRDGKVCLVRSDRDDHTQHWVKDMKYSTRVKDEEG 168
Query: 581 YPAFAIVNKATGQAIKHSLGQSHPVRLVPYNPDFLDESVLWTESRDVGNGFRCVRMVNNI 402
YPA A+VNKATG A+KHS+GQSHPVRLV YNP+++DESVLWTESRDVG+GFRC+RMVNNI
Sbjct: 169 YPAMALVNKATGDALKHSIGQSHPVRLVRYNPEYMDESVLWTESRDVGSGFRCIRMVNNI 228
Query: 401 YLNFDALNGDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPY 282
YLNFDAL+GDK HGGVRDGT +VLW+WCEGDNQRWKI P+
Sbjct: 229 YLNFDALHGDKDHGGVRDGTTLVLWEWCEGDNQRWKIVPW 268
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60503603
Number of Sequences: 59712
Number of extensions: 1886791
Number of successful extensions: 15731
Number of sequences better than 1.0e-10: 14
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15715
Number of HSP's gapped (non-prelim): 13
length of query: 287
length of database: 26,991,925
effective HSP length: 50
effective length of query: 236
effective length of database: 24,006,325
effective search space: 5665492700
effective search space used: 5665492700
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1254 Members:137 3pri:Y 1e-105
T03960 r40g2 protein - rice (fragment) emb|CAA70174.1|
osr40g2 [Oryza sativa (indica cultivar-group)]
(1509 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9635.m04894|protein r40g2 protein - rice (fragment) 629 e-180
9631.m02098|protein r40c1 protein - rice 562 e-160
9635.m04891|protein Similar to r40g3 protein - rice 483 e-136
9635.m04895|protein r40g3 protein - rice 270 3e-72
9631.m02086|protein QXW lectin repeat, putative 257 4e-68
9629.m00047|protein expressed protein 256 8e-68
9631.m02084|protein hypothetical protein 130 6e-30
9629.m00408|protein expressed protein 78 3e-14
9631.m06019|protein expressed protein 76 1e-13
9633.m02267|protein retrotransposon protein, putative, un... 73 1e-12
9631.m03557|protein putative protein kinase 69 1e-11
9633.m03752|protein retrotransposon protein, putative, un... 69 2e-11
9639.m04036|protein transposon protein, putative, CACTA, ... 69 2e-11
9629.m05120|protein retrotransposon protein, putative, Ty... 68 3e-11
9635.m04894|protein r40g2 protein - rice (fragment)
Length = 343
Score = 629 bits (1604), Expect = e-180
Identities = 292/347 (84%), Positives = 306/347 (88%), Gaps = 2/347 (0%)
Frame = +3
Query: 54 MFGFGHHHKDQAPAA-SGPNQIFKIYCRASEDYCLAVRDGEVVLAPVNPKDETQHWLKDM 230
MFGFGHHH +QAPAA S PNQIFKI+CRA+E+YCL VRD VVLAPVNPKDE QHW KDM
Sbjct: 1 MFGFGHHH-NQAPAAPSDPNQIFKIFCRANENYCLTVRDSAVVLAPVNPKDEHQHWFKDM 59
Query: 231 RFSTTVKDEEGMPAFALVNKATGLAVKHSIGQSHPVKLVPFNPAYEDASVLWTESKDVGK 410
RFST VKD EGMPAFALVNKATGLAVKHS+GQSHPVKLVPFNP YEDASVLWTESKDVGK
Sbjct: 60 RFSTKVKDGEGMPAFALVNKATGLAVKHSLGQSHPVKLVPFNPEYEDASVLWTESKDVGK 119
Query: 411 GFRCIRMVNNTRLGFDALNGDKDHGGVHDGTTVVLWEWCKGDNQCWKVWPWA-EAHAAVE 587
GFRCIRMVNNTRL DA +GDKDHGGV DGTTVVLWEWCKGDNQ WK+ PW EAH++
Sbjct: 120 GFRCIRMVNNTRLNLDAFHGDKDHGGVRDGTTVVLWEWCKGDNQSWKILPWGPEAHSSSP 179
Query: 588 SGATMGNNPHAMGGGPPVHAVRVFCKAGEDYSLTARNGTVCLAPTNPRDDYQHWIKDMRH 767
AT GG PVH VRVF AGEDY LT RNGT CLAP NPRDDYQHWIKDMRH
Sbjct: 180 GAATA-----CTIGGVPVHTVRVFSAAGEDYCLTVRNGTACLAPKNPRDDYQHWIKDMRH 234
Query: 768 SNKIRDEEGYPAFAIVNKVTGECIKHSTGQGHPVKLVPYNPAYQDESVLWTESRDVGKGF 947
SNKIRDEEGYPAFA+VNKVTGE IKHSTGQGHPVKLVPYNP YQDESVLWTES+DVGKGF
Sbjct: 235 SNKIRDEEGYPAFALVNKVTGEAIKHSTGQGHPVKLVPYNPEYQDESVLWTESKDVGKGF 294
Query: 948 RCVRMVNNIYLNFDAFHGDKAHGGVHDGTEVVLWKWCEGDNQRWKILPW 1094
RC+RMVNNIYLNFDAFHGDK HGG+HDGTE+VLWKWCEGDNQRWKILPW
Sbjct: 295 RCIRMVNNIYLNFDAFHGDKDHGGIHDGTEIVLWKWCEGDNQRWKILPW 343
9631.m02098|protein r40c1 protein - rice
Length = 348
Score = 562 bits (1433), Expect = e-160
Identities = 259/347 (74%), Positives = 285/347 (81%), Gaps = 10/347 (2%)
Frame = +3
Query: 54 MFGFGHHH---KDQAP-----AASGPNQ-IFKIYCRASEDYCLAVRDGEVVLAPVNPKDE 206
MFGFGHH +DQ P G +Q FKI+CRA E YC+AVR+G VVLAP NP+DE
Sbjct: 1 MFGFGHHGHHGQDQPPQHHGGGGGGAHQPTFKIFCRADEGYCVAVREGNVVLAPTNPRDE 60
Query: 207 TQHWLKDMRFSTTVKDEEGMPAFALVNKATGLAVKHSIGQSHPVKLVPFNPAYEDASVLW 386
QHW KDMRFS +KDEEG PAFALVNKATGLA+KHS+GQ HPVKL PFNP Y D SVLW
Sbjct: 61 HQHWYKDMRFSAKIKDEEGNPAFALVNKATGLAIKHSLGQGHPVKLAPFNPEYPDESVLW 120
Query: 387 TESKDVGKGFRCIRMVNNTRLGFDALNGDKDHGGVHDGTTVVLWEWCKGDNQCWKVWPWA 566
TES DVGK FRCIRM+NN RL FDA +GDKDHGGVHDGTT+VLWEW KGDNQCWK+ PW
Sbjct: 121 TESGDVGKSFRCIRMLNNIRLNFDAFHGDKDHGGVHDGTTIVLWEWAKGDNQCWKILPWG 180
Query: 567 -EAHAAVESGATMGNNPHAMGGGPPVHAVRVFCKAGEDYSLTARNGTVCLAPTNPRDDYQ 743
EA+A + A G N VR+FCKA E +S+T R G+VCLAPTNPRD+YQ
Sbjct: 181 DEAYAGGSANAPRGGNEPT---------VRIFCKADEGFSVTVRGGSVCLAPTNPRDEYQ 231
Query: 744 HWIKDMRHSNKIRDEEGYPAFAIVNKVTGECIKHSTGQGHPVKLVPYNPAYQDESVLWTE 923
HWIKDMRHSN I+DEEGYPAFA+VN+VTGE IKHS G+GHPVKLVPYNP YQDESVLWTE
Sbjct: 232 HWIKDMRHSNSIKDEEGYPAFALVNRVTGEAIKHSQGEGHPVKLVPYNPGYQDESVLWTE 291
Query: 924 SRDVGKGFRCVRMVNNIYLNFDAFHGDKAHGGVHDGTEVVLWKWCEGDNQRWKILPW 1094
SRDVG GFRC+RMVNNIYLNFDA HGDK HGGV DGT V LWKWCEGDNQRWKI+PW
Sbjct: 292 SRDVGHGFRCIRMVNNIYLNFDALHGDKDHGGVRDGTTVALWKWCEGDNQRWKIVPW 348
9635.m04891|protein Similar to r40g3 protein - rice
Length = 346
Score = 483 bits (1231), Expect = e-136
Identities = 231/295 (78%), Positives = 248/295 (83%), Gaps = 53/295 (17%)
Frame = +3
Query: 210 QHWLKDMRFSTTVKDEEGMPAFALVNKATGLAVKHSIGQSHPVKLVPFNPAYEDASVLWT 389
QHW KDMR ST VKDEEG PAFALVN+ATGLAVKHS+GQSHPVKLVP+NP Y+D SVLWT
Sbjct: 2 QHWYKDMRHSTRVKDEEGHPAFALVNRATGLAVKHSLGQSHPVKLVPYNPEYQDESVLWT 61
Query: 390 ESKDVGKGFRCIRMVNNTRLGFDALNGDKDHGGVHDGTTVVLWEWCKGDNQCWKVWPW-- 563
ESKDVG GFRCIRMVNN L DA +GDK HGGVHDGTTVVLWEWCKGDNQCWK+ PW
Sbjct: 62 ESKDVGHGFRCIRMVNNIYLNLDAFHGDKSHGGVHDGTTVVLWEWCKGDNQCWKILPWGP 121
Query: 564 ---------AEAHAAVES-----------------------------------------G 593
A H A G
Sbjct: 122 EAYAPPPPPAYGHQAYPPPPPNREPGHGYHPAPAFYPPQPPPSHDEPGYGYRPPPVGPPG 181
Query: 594 ATMGNN-PHAMGGGPPVHAVRVFCKAGEDYSLTARNGTVCLAPTNPRDDYQHWIKDMRHS 770
A GN P A+ P VR+ C+A E YSLT RNG VCLAPTNPRDD+QHW+KDMRHS
Sbjct: 182 AGYGNRLPRALASEP---TVRILCRADEAYSLTVRNGAVCLAPTNPRDDFQHWVKDMRHS 238
Query: 771 NKIRDEEGYPAFAIVNKVTGECIKHSTGQGHPVKLVPYNPAYQDESVLWTESRDVGKGFR 950
I+DEEGYPAFA+VNK TGE IKHS GQ HPV+LVPYNP Y DESVLWTES+DVG GFR
Sbjct: 239 TSIKDEEGYPAFALVNKATGEAIKHSLGQSHPVRLVPYNPEYLDESVLWTESKDVGHGFR 298
Query: 951 CVRMVNNIYLNFDAFHGDKAHGGVHDGTEVVLWKWCEGDNQRWKILPW 1094
CVRMVNNIYLNFDAFHGDK HGGVHDGT VVLW+WC+GDNQRWKILPW
Sbjct: 299 CVRMVNNIYLNFDAFHGDKDHGGVHDGTTVVLWEWCKGDNQRWKILPW 346
Score = 257 bits (649), Expect = 4e-68
Identities = 115/166 (69%), Positives = 132/166 (79%)
Frame = +3
Query: 66 GHHHKDQAPAASGPNQIFKIYCRASEDYCLAVRDGEVVLAPVNPKDETQHWLKDMRFSTT 245
G + ++ P A +I CRA E Y L VR+G V LAP NP+D+ QHW+KDMR ST+
Sbjct: 181 GAGYGNRLPRALASEPTVRILCRADEAYSLTVRNGAVCLAPTNPRDDFQHWVKDMRHSTS 240
Query: 246 VKDEEGMPAFALVNKATGLAVKHSIGQSHPVKLVPFNPAYEDASVLWTESKDVGKGFRCI 425
+KDEEG PAFALVNKATG A+KHS+GQSHPV+LVP+NP Y D SVLWTESKDVG GFRC+
Sbjct: 241 IKDEEGYPAFALVNKATGEAIKHSLGQSHPVRLVPYNPEYLDESVLWTESKDVGHGFRCV 300
Query: 426 RMVNNTRLGFDALNGDKDHGGVHDGTTVVLWEWCKGDNQCWKVWPW 563
RMVNN L FDA +GDKDHGGVHDGTTVVLWEWCKGDNQ WK+ PW
Sbjct: 301 RMVNNIYLNFDAFHGDKDHGGVHDGTTVVLWEWCKGDNQRWKILPW 346
9635.m04895|protein r40g3 protein - rice
Length = 204
Score = 270 bits (684), Expect = 3e-72
Identities = 116/154 (75%), Positives = 132/154 (85%)
Frame = +3
Query: 633 PPVHAVRVFCKAGEDYSLTARNGTVCLAPTNPRDDYQHWIKDMRHSNKIRDEEGYPAFAI 812
PP V+V+C+A +Y++TARNG V LAP NP+D+YQHWIKDMR S I+DEEGYPAFA+
Sbjct: 50 PPQPTVKVYCRANPNYAMTARNGAVVLAPANPKDEYQHWIKDMRWSTSIKDEEGYPAFAL 109
Query: 813 VNKVTGECIKHSTGQGHPVKLVPYNPAYQDESVLWTESRDVGKGFRCVRMVNNIYLNFDA 992
VNK TG+ IKHS GQ HPV+LVPYNP DESVLWTESRDVG GFRC+RMVNNIYLNFDA
Sbjct: 110 VNKATGQAIKHSLGQSHPVRLVPYNPEVMDESVLWTESRDVGNGFRCIRMVNNIYLNFDA 169
Query: 993 FHGDKAHGGVHDGTEVVLWKWCEGDNQRWKILPW 1094
FHGDK HGGV DGT++VLWKWCEGDNQRWKI P+
Sbjct: 170 FHGDKYHGGVRDGTDIVLWKWCEGDNQRWKIQPY 203
Score = 243 bits (615), Expect = 4e-64
Identities = 106/153 (69%), Positives = 126/153 (82%)
Frame = +3
Query: 105 PNQIFKIYCRASEDYCLAVRDGEVVLAPVNPKDETQHWLKDMRFSTTVKDEEGMPAFALV 284
P K+YCRA+ +Y + R+G VVLAP NPKDE QHW+KDMR+ST++KDEEG PAFALV
Sbjct: 51 PQPTVKVYCRANPNYAMTARNGAVVLAPANPKDEYQHWIKDMRWSTSIKDEEGYPAFALV 110
Query: 285 NKATGLAVKHSIGQSHPVKLVPFNPAYEDASVLWTESKDVGKGFRCIRMVNNTRLGFDAL 464
NKATG A+KHS+GQSHPV+LVP+NP D SVLWTES+DVG GFRCIRMVNN L FDA
Sbjct: 111 NKATGQAIKHSLGQSHPVRLVPYNPEVMDESVLWTESRDVGNGFRCIRMVNNIYLNFDAF 170
Query: 465 NGDKDHGGVHDGTTVVLWEWCKGDNQCWKVWPW 563
+GDK HGGV DGT +VLW+WC+GDNQ WK+ P+
Sbjct: 171 HGDKYHGGVRDGTDIVLWKWCEGDNQRWKIQPY 203
9631.m02086|protein QXW lectin repeat, putative
Length = 391
Score = 257 bits (649), Expect = 4e-68
Identities = 140/330 (42%), Positives = 186/330 (55%)
Frame = +3
Query: 102 GPNQIFKIYCRASEDYCLAVRDGEVVLAPVNPKDETQHWLKDMRFSTTVKDEEGMPAFAL 281
G F+I CRAS+D LA+ +GEV W KD+R+S +KDE G AFAL
Sbjct: 103 GMEHAFRIQCRASDDLSLAIVNGEV-------------WHKDVRYSAGLKDEAGRLAFAL 149
Query: 282 VNKATGLAVKHSIGQSHPVKLVPFNPAYEDASVLWTESKDVGKGFRCIRMVNNTRLGFDA 461
VNKATG A+KHS G +HPV+LV F P Y D SVLWTES+D G GF I M+NN FDA
Sbjct: 150 VNKATGEAIKHSFGYNHPVRLVKFEPGYLDESVLWTESEDTGDGFHRIHMINNADYIFDA 209
Query: 462 LNGDKDHGGVHDGTTVVLWEWCKGDNQCWKVWPWAEAHAAVESGATMGNNPHAMGGGPPV 641
G DGT ++L+ W GDNQ W++ P A E PPV
Sbjct: 210 EEAVPLCDGARDGTRLILFRWNGGDNQLWRMAPCIGAEPDHE---------------PPV 254
Query: 642 HAVRVFCKAGEDYSLTARNGTVCLAPTNPRDDYQHWIKDMRHSNKIRDEEGYPAFAIVNK 821
H V LT R+G V LA + +D QHW R++ ++ DEEG+ +F ++N
Sbjct: 255 HVV----------CLTVRHGAVVLARIDHKDPKQHWTVSFRNTGRVTDEEGHRSFLLLNP 304
Query: 822 VTGECIKHSTGQGHPVKLVPYNPAYQDESVLWTESRDVGKGFRCVRMVNNIYLNFDAFHG 1001
TG+ +K S + PV+LV + P D ++LWT S +VG+GF C+R V+++ L DA
Sbjct: 305 STGKAMKRSADKEQPVELVGHGPDSVDVALLWTRSDNVGEGFHCIRTVSDVSLVLDA--- 361
Query: 1002 DKAHGGVHDGTEVVLWKWCEGDNQRWKILP 1091
A GG HDGT ++++ W G NQRW +LP
Sbjct: 362 --AGGGRHDGTPIIVFPWNGGANQRWSMLP 389
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116125488
Number of Sequences: 59712
Number of extensions: 4064058
Number of successful extensions: 66154
Number of sequences better than 1.0e-10: 28
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 65638
Number of HSP's gapped (non-prelim): 126
length of query: 503
length of database: 26,991,925
effective HSP length: 52
effective length of query: 450
effective length of database: 23,886,901
effective search space: 10749105450
effective search space used: 10749105450
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1257 Members:20 3pri:N 1e-102
T03962 r40g3 protein - rice emb|CAA70175.1| osr40g3 [Oryza
sativa (indica cultivar-group)]
(757 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9635.m04895|protein r40g3 protein - rice 376 e-104
9635.m04891|protein Similar to r40g3 protein - rice 281 8e-76
9631.m02098|protein r40c1 protein - rice 265 9e-71
9635.m04894|protein r40g2 protein - rice (fragment) 259 4e-69
9629.m00047|protein expressed protein 250 2e-66
9631.m02086|protein QXW lectin repeat, putative 149 6e-36
9631.m02084|protein hypothetical protein 131 1e-30
9635.m04895|protein r40g3 protein - rice
Length = 204
Score = 376 bits (955), Expect = e-104
Identities = 169/195 (86%), Positives = 184/195 (93%), Gaps = 9/195 (4%)
Frame = +2
Query: 5 MDYY--RESYGSYG-------MATPGYAPPVPYGMSQVNVDGNCGGRPMPPQPTVKIYCR 157
MD+Y RE YG YG +ATPGYAP PYGMSQVN++GN GR +PPQPTVK+YCR
Sbjct: 1 MDFYGRREQYGGYGGYGGGGALATPGYAPAAPYGMSQVNIEGNGCGRTLPPQPTVKVYCR 60
Query: 158 ANPNYAMSVRNGKVVLAPANPKDDYQHWIKDMRWSTSIKDEEGYPAFAIVNKATGQAIKH 337
ANPNYAM+ RNG VVLAPANPKD+YQHWIKDMRWSTSIKDEEGYPAFA+VNKATGQAIKH
Sbjct: 61 ANPNYAMTARNGAVVLAPANPKDEYQHWIKDMRWSTSIKDEEGYPAFALVNKATGQAIKH 120
Query: 338 SLGQSHPVRLVPYNPDFLDESVLWTESRDVGNGFRCVRMVNNIYLNFDALNGDKYHGGVR 517
SLGQSHPVRLVPYNP+ +DESVLWTESRDVGNGFRC+RMVNNIYLNFDA +GDKYHGGVR
Sbjct: 121 SLGQSHPVRLVPYNPEVMDESVLWTESRDVGNGFRCIRMVNNIYLNFDAFHGDKYHGGVR 180
Query: 518 DGTEVVLWKWCEGDNQRWKIQPYY 589
DGT++VLWKWCEGDNQRWKIQPYY
Sbjct: 181 DGTDIVLWKWCEGDNQRWKIQPYY 204
9635.m04891|protein Similar to r40g3 protein - rice
Length = 346
Score = 281 bits (712), Expect = 8e-76
Identities = 130/178 (73%), Positives = 150/178 (84%)
Frame = +2
Query: 53 GYAPPVPYGMSQVNVDGNCGGRPMPPQPTVKIYCRANPNYAMSVRNGKVVLAPANPKDDY 232
GY PP P G GN R + +PTV+I CRA+ Y+++VRNG V LAP NP+DD+
Sbjct: 171 GYRPP-PVGPPGAGY-GNRLPRALASEPTVRILCRADEAYSLTVRNGAVCLAPTNPRDDF 228
Query: 233 QHWIKDMRWSTSIKDEEGYPAFAIVNKATGQAIKHSLGQSHPVRLVPYNPDFLDESVLWT 412
QHW+KDMR STSIKDEEGYPAFA+VNKATG+AIKHSLGQSHPVRLVPYNP++LDESVLWT
Sbjct: 229 QHWVKDMRHSTSIKDEEGYPAFALVNKATGEAIKHSLGQSHPVRLVPYNPEYLDESVLWT 288
Query: 413 ESRDVGNGFRCVRMVNNIYLNFDALNGDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPY 586
ES+DVG+GFRCVRMVNNIYLNFDA +GDK HGGV DGT VVLW+WC+GDNQRWKI P+
Sbjct: 289 ESKDVGHGFRCVRMVNNIYLNFDAFHGDKDHGGVHDGTTVVLWEWCKGDNQRWKILPW 346
Score = 212 bits (533), Expect = 8e-55
Identities = 91/118 (77%), Positives = 106/118 (89%)
Frame = +2
Query: 233 QHWIKDMRWSTSIKDEEGYPAFAIVNKATGQAIKHSLGQSHPVRLVPYNPDFLDESVLWT 412
QHW KDMR ST +KDEEG+PAFA+VN+ATG A+KHSLGQSHPV+LVPYNP++ DESVLWT
Sbjct: 2 QHWYKDMRHSTRVKDEEGHPAFALVNRATGLAVKHSLGQSHPVKLVPYNPEYQDESVLWT 61
Query: 413 ESRDVGNGFRCVRMVNNIYLNFDALNGDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPY 586
ES+DVG+GFRC+RMVNNIYLN DA +GDK HGGV DGT VVLW+WC+GDNQ WKI P+
Sbjct: 62 ESKDVGHGFRCIRMVNNIYLNLDAFHGDKSHGGVHDGTTVVLWEWCKGDNQCWKILPW 119
9631.m02098|protein r40c1 protein - rice
Length = 348
Score = 265 bits (669), Expect = 9e-71
Identities = 114/152 (75%), Positives = 135/152 (88%)
Frame = +2
Query: 131 QPTVKIYCRANPNYAMSVRNGKVVLAPANPKDDYQHWIKDMRWSTSIKDEEGYPAFAIVN 310
+PTV+I+C+A+ ++++VR G V LAP NP+D+YQHWIKDMR S SIKDEEGYPAFA+VN
Sbjct: 197 EPTVRIFCKADEGFSVTVRGGSVCLAPTNPRDEYQHWIKDMRHSNSIKDEEGYPAFALVN 256
Query: 311 KATGQAIKHSLGQSHPVRLVPYNPDFLDESVLWTESRDVGNGFRCVRMVNNIYLNFDALN 490
+ TG+AIKHS G+ HPV+LVPYNP + DESVLWTESRDVG+GFRC+RMVNNIYLNFDAL+
Sbjct: 257 RVTGEAIKHSQGEGHPVKLVPYNPGYQDESVLWTESRDVGHGFRCIRMVNNIYLNFDALH 316
Query: 491 GDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPY 586
GDK HGGVRDGT V LWKWCEGDNQRWKI P+
Sbjct: 317 GDKDHGGVRDGTTVALWKWCEGDNQRWKIVPW 348
Score = 242 bits (612), Expect = 4e-64
Identities = 108/159 (67%), Positives = 128/159 (79%)
Frame = +2
Query: 110 GGRPMPPQPTVKIYCRANPNYAMSVRNGKVVLAPANPKDDYQHWIKDMRWSTSIKDEEGY 289
GG QPT KI+CRA+ Y ++VR G VVLAP NP+D++QHW KDMR+S IKDEEG
Sbjct: 21 GGGGGAHQPTFKIFCRADEGYCVAVREGNVVLAPTNPRDEHQHWYKDMRFSAKIKDEEGN 80
Query: 290 PAFAIVNKATGQAIKHSLGQSHPVRLVPYNPDFLDESVLWTESRDVGNGFRCVRMVNNIY 469
PAFA+VNKATG AIKHSLGQ HPV+L P+NP++ DESVLWTES DVG FRC+RM+NNI
Sbjct: 81 PAFALVNKATGLAIKHSLGQGHPVKLAPFNPEYPDESVLWTESGDVGKSFRCIRMLNNIR 140
Query: 470 LNFDALNGDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPY 586
LNFDA +GDK HGGV DGT +VLW+W +GDNQ WKI P+
Sbjct: 141 LNFDAFHGDKDHGGVHDGTTIVLWEWAKGDNQCWKILPW 179
9635.m04894|protein r40g2 protein - rice (fragment)
Length = 343
Score = 259 bits (655), Expect = 4e-69
Identities = 111/153 (72%), Positives = 130/153 (84%)
Frame = +2
Query: 128 PQPTVKIYCRANPNYAMSVRNGKVVLAPANPKDDYQHWIKDMRWSTSIKDEEGYPAFAIV 307
P TV+++ A +Y ++VRNG LAP NP+DDYQHWIKDMR S I+DEEGYPAFA+V
Sbjct: 191 PVHTVRVFSAAGEDYCLTVRNGTACLAPKNPRDDYQHWIKDMRHSNKIRDEEGYPAFALV 250
Query: 308 NKATGQAIKHSLGQSHPVRLVPYNPDFLDESVLWTESRDVGNGFRCVRMVNNIYLNFDAL 487
NK TG+AIKHS GQ HPV+LVPYNP++ DESVLWTES+DVG GFRC+RMVNNIYLNFDA
Sbjct: 251 NKVTGEAIKHSTGQGHPVKLVPYNPEYQDESVLWTESKDVGKGFRCIRMVNNIYLNFDAF 310
Query: 488 NGDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPY 586
+GDK HGG+ DGTE+VLWKWCEGDNQRWKI P+
Sbjct: 311 HGDKDHGGIHDGTEIVLWKWCEGDNQRWKILPW 343
Score = 250 bits (631), Expect = 3e-66
Identities = 109/156 (69%), Positives = 129/156 (81%)
Frame = +2
Query: 119 PMPPQPTVKIYCRANPNYAMSVRNGKVVLAPANPKDDYQHWIKDMRWSTSIKDEEGYPAF 298
P P KI+CRAN NY ++VR+ VVLAP NPKD++QHW KDMR+ST +KD EG PAF
Sbjct: 15 PSDPNQIFKIFCRANENYCLTVRDSAVVLAPVNPKDEHQHWFKDMRFSTKVKDGEGMPAF 74
Query: 299 AIVNKATGQAIKHSLGQSHPVRLVPYNPDFLDESVLWTESRDVGNGFRCVRMVNNIYLNF 478
A+VNKATG A+KHSLGQSHPV+LVP+NP++ D SVLWTES+DVG GFRC+RMVNN LN
Sbjct: 75 ALVNKATGLAVKHSLGQSHPVKLVPFNPEYEDASVLWTESKDVGKGFRCIRMVNNTRLNL 134
Query: 479 DALNGDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPY 586
DA +GDK HGGVRDGT VVLW+WC+GDNQ WKI P+
Sbjct: 135 DAFHGDKDHGGVRDGTTVVLWEWCKGDNQSWKILPW 170
9629.m00047|protein expressed protein
Length = 268
Score = 250 bits (632), Expect = 2e-66
Identities = 113/159 (71%), Positives = 137/159 (86%), Gaps = 1/159 (0%)
Frame = +2
Query: 110 GGRPMPPQPTVKIYCRANP-NYAMSVRNGKVVLAPANPKDDYQHWIKDMRWSTSIKDEEG 286
GG PP T +IYC+A NY+++VR+GKV L ++ D QHW+KDM++ST +KDEEG
Sbjct: 110 GGGGAPPV-THRIYCKAGEDNYSLAVRDGKVCLVRSDRDDHTQHWVKDMKYSTRVKDEEG 168
Query: 287 YPAFAIVNKATGQAIKHSLGQSHPVRLVPYNPDFLDESVLWTESRDVGNGFRCVRMVNNI 466
YPA A+VNKATG A+KHS+GQSHPVRLV YNP+++DESVLWTESRDVG+GFRC+RMVNNI
Sbjct: 169 YPAMALVNKATGDALKHSIGQSHPVRLVRYNPEYMDESVLWTESRDVGSGFRCIRMVNNI 228
Query: 467 YLNFDALNGDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPY 586
YLNFDAL+GDK HGGVRDGT +VLW+WCEGDNQRWKI P+
Sbjct: 229 YLNFDALHGDKDHGGVRDGTTLVLWEWCEGDNQRWKIVPW 268
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55927576
Number of Sequences: 59712
Number of extensions: 1795089
Number of successful extensions: 16444
Number of sequences better than 1.0e-10: 14
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16428
Number of HSP's gapped (non-prelim): 13
length of query: 252
length of database: 26,991,925
effective HSP length: 50
effective length of query: 201
effective length of database: 24,006,325
effective search space: 4825271325
effective search space used: 4825271325
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 157 (65.6 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1327 Members:168 3pri:Y 5e-80
P13565 Calmodulin sp|P29612|CALM_ORYSA CALMODULIN
(992 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m02020|protein calmodulin 1 (clone lambda DASH) - rice 301 2e-81
9629.m01617|protein calmodulin 1 (clone lambda DASH) - rice 301 2e-81
9635.m04925|protein hypothetical protein 299 6e-81
9633.m03858|protein calmodulin 298 1e-80
9629.m01715|protein EF hand, putative 298 1e-80
9629.m05847|protein EF hand, putative 257 2e-68
9640.m00297|protein AC005917 putative WD-40 repeat protein 210 3e-54
9631.m05215|protein putative calmodulin 210 3e-54
9640.m04022|protein EF hand, putative 201 1e-51
9639.m00307|protein Similar to calmodulin 175 9e-44
9639.m03398|protein 134023 calmodulin 175 9e-44
9636.m00142|protein EF hand, putative 146 6e-35
9638.m02106|protein EF hand, putative 143 6e-34
9635.m04273|protein EF hand, putative 143 6e-34
9629.m02995|protein EF hand, putative 141 2e-33
9633.m03857|protein calmodulin 134 2e-31
9633.m04719|protein EF hand, putative 125 1e-28
9629.m04021|protein EF hand, putative 122 8e-28
9629.m07132|protein EF hand, putative 116 8e-26
9633.m03864|protein contains similarity to eukaryotic pro... 113 4e-25
9631.m02020|protein calmodulin 1 (clone lambda DASH) - rice
Length = 149
Score = 301 bits (762), Expect = 2e-81
Identities = 149/149 (100%), Positives = 149/149 (100%)
Frame = +2
Query: 128 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 307
MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 308 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 487
NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 488 EVDEMIREADVDGDGQINYEEFVKVMMAK 574
EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
9629.m01617|protein calmodulin 1 (clone lambda DASH) - rice
Length = 149
Score = 301 bits (762), Expect = 2e-81
Identities = 149/149 (100%), Positives = 149/149 (100%)
Frame = +2
Query: 128 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 307
MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 308 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 487
NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 488 EVDEMIREADVDGDGQINYEEFVKVMMAK 574
EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
9635.m04925|protein hypothetical protein
Length = 415
Score = 299 bits (757), Expect = 6e-81
Identities = 148/148 (100%), Positives = 148/148 (100%)
Frame = +2
Query: 128 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 307
MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 308 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 487
NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 488 EVDEMIREADVDGDGQINYEEFVKVMMA 571
EVDEMIREADVDGDGQINYEEFVKVMMA
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMA 148
Score = 67.9 bits (163), Expect = 3e-11
Identities = 35/77 (45%), Positives = 50/77 (64%)
Frame = +2
Query: 344 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 523
MA ++ D D E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D D
Sbjct: 1 MADQLTD-DQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 524 GDGQINYEEFVKVMMAK 574
G+G I++ EF+ +M K
Sbjct: 60 GNGTIDFPEFLNLMARK 76
9633.m03858|protein calmodulin
Length = 149
Score = 298 bits (755), Expect = 1e-80
Identities = 147/149 (98%), Positives = 149/149 (99%)
Frame = +2
Query: 128 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 307
MADQLTD+QIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTDEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 308 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 487
NGTIDFPEFLNLMA+KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 488 EVDEMIREADVDGDGQINYEEFVKVMMAK 574
EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
9629.m01715|protein EF hand, putative
Length = 149
Score = 298 bits (755), Expect = 1e-80
Identities = 147/149 (98%), Positives = 149/149 (99%)
Frame = +2
Query: 128 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 307
MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 308 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 487
NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 488 EVDEMIREADVDGDGQINYEEFVKVMMAK 574
EV+EMIREADVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVEEMIREADVDGDGQINYDEFVKVMMAK 149
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63168138
Number of Sequences: 59712
Number of extensions: 1892456
Number of successful extensions: 21676
Number of sequences better than 1.0e-10: 94
Number of HSP's better than 0.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 21332
Number of HSP's gapped (non-prelim): 158
length of query: 330
length of database: 26,991,925
effective HSP length: 51
effective length of query: 279
effective length of database: 23,946,613
effective search space: 6681105027
effective search space used: 6681105027
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1330 Members:104 3pri:Y 4e-80
AAC49582.1 calmodulin TaCaM2-2 gb|AAC49583.1| calmodulin
TaCaM2-3
(832 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m02020|protein calmodulin 1 (clone lambda DASH) - rice 299 4e-81
9629.m01715|protein EF hand, putative 299 4e-81
9629.m01617|protein calmodulin 1 (clone lambda DASH) - rice 299 4e-81
9635.m04925|protein hypothetical protein 297 1e-80
9633.m03858|protein calmodulin 296 2e-80
9629.m05847|protein EF hand, putative 256 4e-68
9640.m00297|protein AC005917 putative WD-40 repeat protein 212 5e-55
9631.m05215|protein putative calmodulin 211 1e-54
9640.m04022|protein EF hand, putative 203 4e-52
9639.m00307|protein Similar to calmodulin 175 7e-44
9639.m03398|protein 134023 calmodulin 174 2e-43
9636.m00142|protein EF hand, putative 147 2e-35
9635.m04273|protein EF hand, putative 143 5e-34
9638.m02106|protein EF hand, putative 141 2e-33
9629.m02995|protein EF hand, putative 138 1e-32
9633.m03857|protein calmodulin 134 3e-31
9633.m04719|protein EF hand, putative 127 3e-29
9629.m04021|protein EF hand, putative 121 1e-27
9631.m05640|protein calcium-dependent protein kinase 3 120 4e-27
9633.m03864|protein contains similarity to eukaryotic pro... 113 4e-25
9631.m02020|protein calmodulin 1 (clone lambda DASH) - rice
Length = 149
Score = 299 bits (758), Expect = 4e-81
Identities = 147/149 (98%), Positives = 149/149 (99%)
Frame = +2
Query: 83 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 262
MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 263 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 442
NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 443 EVDEMVREADVDGDGQINYDEFVKVMMAK 529
EVDEM+READVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
9629.m01715|protein EF hand, putative
Length = 149
Score = 299 bits (758), Expect = 4e-81
Identities = 147/149 (98%), Positives = 149/149 (99%)
Frame = +2
Query: 83 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 262
MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 263 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 442
NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 443 EVDEMVREADVDGDGQINYDEFVKVMMAK 529
EV+EM+READVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVEEMIREADVDGDGQINYDEFVKVMMAK 149
9629.m01617|protein calmodulin 1 (clone lambda DASH) - rice
Length = 149
Score = 299 bits (758), Expect = 4e-81
Identities = 147/149 (98%), Positives = 149/149 (99%)
Frame = +2
Query: 83 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 262
MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 263 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 442
NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 443 EVDEMVREADVDGDGQINYDEFVKVMMAK 529
EVDEM+READVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
9635.m04925|protein hypothetical protein
Length = 415
Score = 297 bits (753), Expect = 1e-80
Identities = 146/148 (98%), Positives = 148/148 (99%)
Frame = +2
Query: 83 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 262
MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 263 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 442
NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 443 EVDEMVREADVDGDGQINYDEFVKVMMA 526
EVDEM+READVDGDGQINY+EFVKVMMA
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMA 148
Score = 67.5 bits (162), Expect = 3e-11
Identities = 34/77 (44%), Positives = 50/77 (64%)
Frame = +2
Query: 299 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMVREADVD 478
MA ++ D D E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +M+ E D D
Sbjct: 1 MADQLTD-DQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 479 GDGQINYDEFVKVMMAK 529
G+G I++ EF+ +M K
Sbjct: 60 GNGTIDFPEFLNLMARK 76
9633.m03858|protein calmodulin
Length = 149
Score = 296 bits (751), Expect = 2e-80
Identities = 145/149 (97%), Positives = 149/149 (99%)
Frame = +2
Query: 83 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 262
MADQLTD+QIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTDEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 263 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 442
NGTIDFPEFLNLMA+KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 443 EVDEMVREADVDGDGQINYDEFVKVMMAK 529
EVDEM+READVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51163838
Number of Sequences: 59712
Number of extensions: 1406537
Number of successful extensions: 10672
Number of sequences better than 1.0e-10: 95
Number of HSP's better than 0.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 10330
Number of HSP's gapped (non-prelim): 159
length of query: 277
length of database: 26,991,925
effective HSP length: 50
effective length of query: 226
effective length of database: 24,006,325
effective search space: 5425429450
effective search space used: 5425429450
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 157 (65.6 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1334 Members:27 3pri:Y 9e-19
T06472 low-temperature-specific protein TACR7 - wheat
(fragment) gb|AAC37511.2| pTACR7 [Triticum aestivum]
(959 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
***** No hits found ******
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59975139
Number of Sequences: 59712
Number of extensions: 1835846
Number of successful extensions: 22827
Number of sequences better than 1.0e-10: 0
Number of HSP's better than 0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22827
Number of HSP's gapped (non-prelim): 0
length of query: 319
length of database: 26,991,925
effective HSP length: 51
effective length of query: 268
effective length of database: 23,946,613
effective search space: 6417692284
effective search space used: 6417692284
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1335 Members:34 3pri:Y 5e-24
T04476 acclimation protein 2 - barley emb|CAA66490.1|
BLT14.2 protein [Hordeum vulgare subsp. vulgare]
(723 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
***** No hits found ******
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51106744
Number of Sequences: 59712
Number of extensions: 1656304
Number of successful extensions: 20225
Number of sequences better than 1.0e-10: 0
Number of HSP's better than 0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20225
Number of HSP's gapped (non-prelim): 0
length of query: 241
length of database: 26,991,925
effective HSP length: 50
effective length of query: 190
effective length of database: 24,006,325
effective search space: 4561201750
effective search space used: 4561201750
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 157 (65.6 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1340 Members:7 3pri:Y 1e-61
CAA46150.1 calmodulin [Oryza sativa] emb|CAA74307.1| calmodulin
[Zea mays]
(892 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9633.m03858|protein calmodulin 289 6e-78
9631.m02020|protein calmodulin 1 (clone lambda DASH) - rice 289 6e-78
9629.m01617|protein calmodulin 1 (clone lambda DASH) - rice 289 6e-78
9635.m04925|protein hypothetical protein 287 2e-77
9629.m01715|protein EF hand, putative 286 4e-77
9629.m05847|protein EF hand, putative 248 9e-66
9631.m05215|protein putative calmodulin 203 3e-52
9640.m00297|protein AC005917 putative WD-40 repeat protein 202 8e-52
9640.m04022|protein EF hand, putative 192 7e-49
9639.m00307|protein Similar to calmodulin 176 3e-44
9639.m03398|protein 134023 calmodulin 168 1e-41
9636.m00142|protein EF hand, putative 139 5e-33
9638.m02106|protein EF hand, putative 136 7e-32
9635.m04273|protein EF hand, putative 133 4e-31
9629.m02995|protein EF hand, putative 131 2e-30
9633.m03857|protein calmodulin 127 3e-29
9633.m04719|protein EF hand, putative 121 2e-27
9629.m04021|protein EF hand, putative 116 7e-26
9629.m07132|protein EF hand, putative 111 1e-24
9633.m01173|protein calmodulin-related protein 2, touch-i... 109 9e-24
9633.m03858|protein calmodulin
Length = 149
Score = 289 bits (731), Expect = 6e-78
Identities = 144/149 (96%), Positives = 145/149 (96%)
Frame = -2
Query: 825 MADQLTDEQIAEFKEAFSLLGXRGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 646
MADQLTDEQIAEFKEAFSL GDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTDEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 645 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 466
NGTIDFPEFLNLMA+KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 465 EVDEMIREADVDGDGQINYEEFVKVMMAK 379
EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
9631.m02020|protein calmodulin 1 (clone lambda DASH) - rice
Length = 149
Score = 289 bits (731), Expect = 6e-78
Identities = 144/149 (96%), Positives = 145/149 (96%)
Frame = -2
Query: 825 MADQLTDEQIAEFKEAFSLLGXRGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 646
MADQLTD+QIAEFKEAFSL GDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 645 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 466
NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 465 EVDEMIREADVDGDGQINYEEFVKVMMAK 379
EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
9629.m01617|protein calmodulin 1 (clone lambda DASH) - rice
Length = 149
Score = 289 bits (731), Expect = 6e-78
Identities = 144/149 (96%), Positives = 145/149 (96%)
Frame = -2
Query: 825 MADQLTDEQIAEFKEAFSLLGXRGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 646
MADQLTD+QIAEFKEAFSL GDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 645 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 466
NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 465 EVDEMIREADVDGDGQINYEEFVKVMMAK 379
EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
9635.m04925|protein hypothetical protein
Length = 415
Score = 287 bits (726), Expect = 2e-77
Identities = 143/148 (96%), Positives = 144/148 (96%)
Frame = -2
Query: 825 MADQLTDEQIAEFKEAFSLLGXRGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 646
MADQLTD+QIAEFKEAFSL GDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 645 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 466
NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 465 EVDEMIREADVDGDGQINYEEFVKVMMA 382
EVDEMIREADVDGDGQINYEEFVKVMMA
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMA 148
Score = 67.9 bits (163), Expect = 2e-11
Identities = 35/77 (45%), Positives = 50/77 (64%)
Frame = -2
Query: 609 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 430
MA ++ D D E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D D
Sbjct: 1 MADQLTD-DQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 429 GDGQINYEEFVKVMMAK 379
G+G I++ EF+ +M K
Sbjct: 60 GNGTIDFPEFLNLMARK 76
9629.m01715|protein EF hand, putative
Length = 149
Score = 286 bits (724), Expect = 4e-77
Identities = 142/149 (95%), Positives = 145/149 (97%)
Frame = -2
Query: 825 MADQLTDEQIAEFKEAFSLLGXRGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 646
MADQLTD+QIAEFKEAFSL GDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 645 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 466
NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 465 EVDEMIREADVDGDGQINYEEFVKVMMAK 379
EV+EMIREADVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVEEMIREADVDGDGQINYDEFVKVMMAK 149
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64860460
Number of Sequences: 59712
Number of extensions: 2212248
Number of successful extensions: 28345
Number of sequences better than 1.0e-10: 89
Number of HSP's better than 0.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 28034
Number of HSP's gapped (non-prelim): 160
length of query: 297
length of database: 26,991,925
effective HSP length: 51
effective length of query: 245
effective length of database: 23,946,613
effective search space: 5866920185
effective search space used: 5866920185
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1368 Members:93 3pri:Y 4e-50
AAM64816.1 Ribosomal protein L7Ae-like [Arabidopsis thaliana]
(1238 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m01314|protein AT5g20160/F5O24_50 243 6e-64
9636.m04248|protein ribosomal protein L22 139 9e-58
9637.m00614|protein ribosomal protein L22 133 6e-57
9638.m00261|protein Ribosomal protein L7Ae, putative 210 3e-54
9630.m04858|protein Ribosomal protein L7Ae, putative 76 9e-14
9634.m01638|protein Ribosomal protein L7Ae, putative 76 1e-13
9631.m01314|protein AT5g20160/F5O24_50
Length = 128
Score = 243 bits (613), Expect = 6e-64
Identities = 122/128 (95%), Positives = 126/128 (98%)
Frame = +3
Query: 96 MSQETVNPKAYPLADAQLTITILDIVQQAANYKQLKKGANEATKTLNRGISEFVVMAADT 275
MSQE VNPKAYPLADAQLT+TILD+VQQA+NYKQLKKGANEATKTLNRGISEFVVMAADT
Sbjct: 1 MSQEVVNPKAYPLADAQLTMTILDLVQQASNYKQLKKGANEATKTLNRGISEFVVMAADT 60
Query: 276 EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKQPIQSLK 455
EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLK PIQ+LK
Sbjct: 61 EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKTPIQNLK 120
Query: 456 DAIEKLLI 479
DAIEKLLI
Sbjct: 121 DAIEKLLI 128
9636.m04248|protein ribosomal protein L22
Length = 171
Score = 139 bits (347), Expect(2) = 9e-58
Identities = 66/80 (82%), Positives = 73/80 (90%)
Frame = +1
Query: 835 MVKYSTDPANPTKSAKAMGRDLRVHFKNTRETAFALRKMPLNKAKRYLEDVLAHKQAIPF 1014
M KYST+P+NPTKSAKAMGRDLRVHFKNTRETAFALRK+PL KAKRYLEDV+AHKQAIPF
Sbjct: 1 MGKYSTEPSNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLVKAKRYLEDVIAHKQAIPF 60
Query: 1015 RRYCRGVGRTAQLRPQPRGG 1074
RRYC GVGRTAQ++ + G
Sbjct: 61 RRYCGGVGRTAQVKSRQSNG 80
Score = 104 bits (258), Expect(2) = 9e-58
Identities = 48/60 (80%), Positives = 55/60 (91%)
Frame = +2
Query: 1058 RSQGGGRWPPQSAKFVLDLLKNAESNAEEKGLDVDALYISHIQVNQAQKQRRRTYRAHGR 1237
+S G GRWP +SA+F+LDLLKNAESNA+ KGLDVD L++SHIQVNQAQKQRRRTYRAHGR
Sbjct: 77 QSNGQGRWPAKSARFILDLLKNAESNADVKGLDVDNLFVSHIQVNQAQKQRRRTYRAHGR 136
9637.m00614|protein ribosomal protein L22
Length = 171
Score = 133 bits (332), Expect(2) = 6e-57
Identities = 63/80 (78%), Positives = 70/80 (86%)
Frame = +1
Query: 835 MVKYSTDPANPTKSAKAMGRDLRVHFKNTRETAFALRKMPLNKAKRYLEDVLAHKQAIPF 1014
MVKYS + NPTKS+KAMGRDLRVHFKNTRETAFA+RK+PL KAKRYLEDV+AHKQAIPF
Sbjct: 1 MVKYSREANNPTKSSKAMGRDLRVHFKNTRETAFAIRKLPLGKAKRYLEDVIAHKQAIPF 60
Query: 1015 RRYCRGVGRTAQLRPQPRGG 1074
RRYC GVGRTAQ + + G
Sbjct: 61 RRYCGGVGRTAQAKSRHSNG 80
Score = 108 bits (266), Expect(2) = 6e-57
Identities = 50/59 (84%), Positives = 54/59 (90%)
Frame = +2
Query: 1061 SQGGGRWPPQSAKFVLDLLKNAESNAEEKGLDVDALYISHIQVNQAQKQRRRTYRAHGR 1237
S G GRWP +SA+F+LDLLKNAESNAE KGLDVD LY+SHIQVNQAQKQRRRTYRAHGR
Sbjct: 78 SNGQGRWPAKSARFILDLLKNAESNAEVKGLDVDTLYVSHIQVNQAQKQRRRTYRAHGR 136
9638.m00261|protein Ribosomal protein L7Ae, putative
Length = 126
Score = 210 bits (530), Expect = 3e-54
Identities = 106/123 (86%), Positives = 112/123 (90%)
Frame = +3
Query: 111 VNPKAYPLADAQLTITILDIVQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEI 290
VNPKAYPLAD+QL I ++V QAANYKQLKKGANEATKTLNRGI+EFVVMAAD EPLEI
Sbjct: 4 VNPKAYPLADSQLAQAIQELVSQAANYKQLKKGANEATKTLNRGIAEFVVMAADAEPLEI 63
Query: 291 LLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKQPIQSLKDAIEK 470
LLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNE S L+ PI +LK AIEK
Sbjct: 64 LLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASNLRDPINNLKVAIEK 123
Query: 471 LLI 479
LLI
Sbjct: 124 LLI 126
9630.m04858|protein Ribosomal protein L7Ae, putative
Length = 150
Score = 76.5 bits (185), Expect = 9e-14
Identities = 36/99 (36%), Positives = 59/99 (59%)
Frame = +3
Query: 93 KMSQETVNPKAYPLADAQLTITILDIVQQAANYKQLKKGANEATKTLNRGISEFVVMAAD 272
K + + P A PLA +L L +V++A+ K LK+G E K++ RG V+A +
Sbjct: 10 KKAPTALAPIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVIAGN 69
Query: 273 TEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRP 389
P++++ H+P+L E+ N+PY++VPSK+ L A RP
Sbjct: 70 ISPIDVITHVPILCEEANIPYIYVPSKEDLATAGTTKRP 108
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82797381
Number of Sequences: 59712
Number of extensions: 2420212
Number of successful extensions: 19596
Number of sequences better than 1.0e-10: 12
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19588
Number of HSP's gapped (non-prelim): 8
length of query: 412
length of database: 26,991,925
effective HSP length: 52
effective length of query: 360
effective length of database: 23,886,901
effective search space: 8599284360
effective search space used: 8599284360
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1373 Members:17 3pri:Y 1e-115
AAO59316.1 glutamate decarboxylase [Oryza sativa (japonica
cultivar-group)]
(1809 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m01260|protein glutamate decarboxylase 922 0.0
9631.m04991|protein glutamate decarboxylase 804 0.0
9636.m03648|protein glutamate decarboxylase 783 0.0
9632.m03519|protein glutamate decarboxylase 783 0.0
9636.m03649|protein glutamate decarboxylase 781 0.0
9632.m03523|protein glutamate decarboxylase 582 e-166
9629.m00009|protein Pyridoxal-dependent decarboxylase con... 82 2e-15
9629.m05120|protein retrotransposon protein, putative, Ty... 75 4e-13
9631.m01260|protein glutamate decarboxylase
Length = 492
Score = 922 bits (2357), Expect = 0.0
Identities = 445/496 (89%), Positives = 471/496 (94%)
Frame = +1
Query: 40 MVLSRAASDTDVSVHSTFASRYVRSSLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNL 219
MVLS+A S++D+SVHSTFASRYVR+SLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1 MVLSKAVSESDMSVHSTFASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNL 60
Query: 220 ASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFHAPLGESETAVG 399
ASFVTTWMEPECDKLIMA+INKNYVDMDEYPVTTELQNRCVNMIAHLFHAPLGE ETAVG
Sbjct: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFHAPLGEDETAVG 120
Query: 400 VGTVGSSEAIMLAGLAFKRRWQNKRKAEGKPFDKPNIITGANVQVCWEKFARYFEVELKE 579
VGTVGSSEAIMLAGLAFKRRWQNKRKAEGKPFDKPNIITGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRRWQNKRKAEGKPFDKPNIITGANVQVCWEKFARYFEVELKE 180
Query: 580 VKLREGYYVMDPEQAVEMVDENTICVAAILGSTLNGEFEDVKRINDLLEDKNKQTGWETP 759
VKLR+GYYVMDPE+AV+MV+ENTICVAAILGSTLNGEFEDVK +NDLL+ KNK+TGWETP
Sbjct: 181 VKLRDGYYVMDPEKAVDMVNENTICVAAILGSTLNGEFEDVKLLNDLLDKKNKETGWETP 240
Query: 760 IHVDAASGGFIAPFLYPELEWDFRLPWVKSINVSGHKYGLVYPGIGWCVWRSKEDLPDEL 939
IHVDAASGGFIAPFLYPELEWDFRLPWVKSINVSGHKYGLVY GIGWC+WR+KEDLP+EL
Sbjct: 241 IHVDAASGGFIAPFLYPELEWDFRLPWVKSINVSGHKYGLVYAGIGWCIWRNKEDLPEEL 300
Query: 940 IFHINYLGTDQPTFTLNFSKGSSQVIAQYYQLIRHGFEGYRNIMENCQENAMVVKEGLEK 1119
IFHINYLGTDQPTFTLNFSKGSSQVIAQYYQLIRHGFEGYRNIMENC ENAMV+KEGL K
Sbjct: 301 IFHINYLGTDQPTFTLNFSKGSSQVIAQYYQLIRHGFEGYRNIMENCHENAMVLKEGLVK 360
Query: 1120 TGRFNIVSKDEGVPLVAFSLKDHSRHDEFEISDMLRRFGWIVPAYTMPADAQHVTVLRVV 1299
TGRF+IVSKDEGVPLVAFSLKD SRHDEFEISDMLRRFGWIVPAYTMP DAQHVTVLRVV
Sbjct: 361 TGRFDIVSKDEGVPLVAFSLKDRSRHDEFEISDMLRRFGWIVPAYTMPPDAQHVTVLRVV 420
Query: 1300 IREEFSRTLAERLVIDIDTVMAQLDVLPSKLTPPALGLLPATLPKTVAKKTELETQKSVA 1479
IREEFSRTLAERLV+DI+ VM QLD LPS+L PP +P VAKK+ELETQ+SV
Sbjct: 421 IREEFSRTLAERLVLDIEKVMYQLDALPSRLMPP----VPPAPLLVVAKKSELETQRSVT 476
Query: 1480 AAWKEFVLAKKTNGVC 1527
AWK+FVLAK+TNGVC
Sbjct: 477 EAWKKFVLAKRTNGVC 492
9631.m04991|protein glutamate decarboxylase
Length = 461
Score = 804 bits (2054), Expect = 0.0
Identities = 390/465 (83%), Positives = 421/465 (89%), Gaps = 1/465 (0%)
Frame = +1
Query: 133 MPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASINKNYVDMDEYP 312
MPE SIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLI AS+NKNYVDMDEYP
Sbjct: 1 MPEQSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIQASVNKNYVDMDEYP 60
Query: 313 VTTELQNRCVNMIAHLFHAPLGESETAVGVGTVGSSEAIMLAGLAFKRRWQNKRKAEGKP 492
VTTELQNRCVNMIAHLF+APLG+SETAVGVGTVGSSEAIMLAGLAFKRRWQNK KA GKP
Sbjct: 61 VTTELQNRCVNMIAHLFNAPLGDSETAVGVGTVGSSEAIMLAGLAFKRRWQNKMKAAGKP 120
Query: 493 FDKPNIITGANVQVCWEKFARYFEVELKEVKLREGYYVMDPEQAVEMVDENTICVAAILG 672
DKPNI+TGANVQVCWEKFARYFEVELKEVKL +GYYVMDP +AV+MVDENTICVAAILG
Sbjct: 121 CDKPNIVTGANVQVCWEKFARYFEVELKEVKLSDGYYVMDPAKAVDMVDENTICVAAILG 180
Query: 673 STLNGEFEDVKRINDLLEDKNKQTGWETPIHVDAASGGFIAPFLYPELEWDFRLPWVKSI 852
STLNGEFEDVK +NDLL KN +TGW+TPIHVDAASGGFIAPFLYPELEWDFRLP VKSI
Sbjct: 181 STLNGEFEDVKLLNDLLTKKNAETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSI 240
Query: 853 NVSGHKYGLVYPGIGWCVWRSKEDLPDELIFHINYLGTDQPTFTLNFSKGSSQVIAQYYQ 1032
NVSGHKYGLVY GIGWC+WRSKEDLP+ELIFHINYLG DQPTFTLNFSKGSSQVIAQYYQ
Sbjct: 241 NVSGHKYGLVYAGIGWCIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 300
Query: 1033 LIRHGFEGYRNIMENCQENAMVVKEGLEKTGRFNIVSKDEGVPLVAFSLKDHSRHDEFEI 1212
LIR GFEGY+NIMENCQENAMV+K+GLEKTGRFNIVSKD GVPLVAFSLKD +RH+EFEI
Sbjct: 301 LIRLGFEGYKNIMENCQENAMVLKQGLEKTGRFNIVSKDNGVPLVAFSLKDSARHNEFEI 360
Query: 1213 SDMLRRFGWIVPAYTMPADAQHVTVLRVVIREEFSRTLAERLVIDIDTVMAQLDVLPSKL 1392
SD LRRFGWIVPAYTMP DAQHVTVLRVVIRE+FSRTLAERLV+D++ V+ +LD LP+++
Sbjct: 361 SDFLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVLDVEKVLHELDALPARV 420
Query: 1393 TPPALGLLPATLPKTVAKKTELETQKSVAAAWKEFVLA-KKTNGVC 1527
A+ A + E+E Q+ V + WK VLA KKTNGVC
Sbjct: 421 VANGGDAAAAS-----ASEREMEKQREVISLWKRAVLAKKKTNGVC 461
9636.m03648|protein glutamate decarboxylase
Length = 497
Score = 783 bits (2000), Expect = 0.0
Identities = 378/496 (76%), Positives = 431/496 (86%), Gaps = 2/496 (0%)
Frame = +1
Query: 40 MVLSRAASDTDVSVHSTFASRYVRSSLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNL 219
MVLS A+S D +V TFA+RY +LPR+RMPE SIP+EAAYQIINDELMLDGNPRLNL
Sbjct: 1 MVLSHASSGRDDAVRCTFATRYACETLPRFRMPEQSIPREAAYQIINDELMLDGNPRLNL 60
Query: 220 ASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFHAPLGESETAVG 399
ASFVTTWMEPECDKLIM S+NKNYVDMDEYPVTTELQNRCVNMIAHLF+AP+ E ETA+G
Sbjct: 61 ASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPIKEDETAIG 120
Query: 400 VGTVGSSEAIMLAGLAFKRRWQNKRKAEGKPFDKPNIITGANVQVCWEKFARYFEVELKE 579
VGTVGSSEAIMLAGLAFKR+WQNKRK +GKP DKPNI+TGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKEQGKPCDKPNIVTGANVQVCWEKFARYFEVELKE 180
Query: 580 VKLREGYYVMDPEQAVEMVDENTICVAAILGSTLNGEFEDVKRINDLLEDKNKQTGWETP 759
VKL EGYYVMDP +AVEMVDENTICVAAILGSTL GEFEDVK +N+LL +KNK+TGW+ P
Sbjct: 181 VKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNNLLTEKNKETGWDVP 240
Query: 760 IHVDAASGGFIAPFLYPELEWDFRLPWVKSINVSGHKYGLVYPGIGWCVWRSKEDLPDEL 939
IHVDAASGGFIAPFLYPELEWDFRLP VKSINVSGHKYGLVYPG+GW +WRSKEDLP+EL
Sbjct: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYPGVGWVIWRSKEDLPEEL 300
Query: 940 IFHINYLGTDQPTFTLNFSKGSSQVIAQYYQLIRHGFEGYRNIMENCQENAMVVKEGLEK 1119
IFHINYLGTDQPTFTLNFSKGSSQ+IAQYYQLIR GFEGY+NIM+NC EN +++EG+E
Sbjct: 301 IFHINYLGTDQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYKNIMQNCMENTAILREGIEA 360
Query: 1120 TGRFNIVSKDEGVPLVAFSLKDHSRHDEFEISDMLRRFGWIVPAYTMPADAQHVTVLRVV 1299
TGRF I+SK+ GVPLVAFSLKD R+ F+IS+ LRRFGWIVPAYTMPA+A+HV VLRVV
Sbjct: 361 TGRFEILSKEAGVPLVAFSLKDSGRYTVFDISEHLRRFGWIVPAYTMPANAEHVAVLRVV 420
Query: 1300 IREEFSRTLAERLVIDIDTVMAQLDVLPSKL--TPPALGLLPATLPKTVAKKTELETQKS 1473
IRE+FSR+LAERLV DI ++ +LD +++ A+ + V KK+ LET++
Sbjct: 421 IREDFSRSLAERLVSDIVKILHELDAHSAQVLKISSAIAKQQSGDDGVVTKKSVLETERE 480
Query: 1474 VAAAWKEFVLAKKTNGVC 1527
+ A W++ V KK G+C
Sbjct: 481 IFAYWRDQV-KKKQTGIC 497
9632.m03519|protein glutamate decarboxylase
Length = 484
Score = 783 bits (2000), Expect = 0.0
Identities = 377/494 (76%), Positives = 430/494 (86%), Gaps = 1/494 (0%)
Frame = +1
Query: 46 LSRAASDTDVSVHS-TFASRYVRSSLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLA 222
++ + + T S+HS TFASRYVR++LPR+RMPE SIPK+AAYQIINDELMLDGNPRLNLA
Sbjct: 1 MALSTAQTGESMHSSTFASRYVRTALPRFRMPEKSIPKDAAYQIINDELMLDGNPRLNLA 60
Query: 223 SFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFHAPLGESETAVGV 402
SFVTTWMEPECDKL+MA+INKNYVDMDEYPVTTELQNRCVNMIAHLF+AP+G+ ETAVGV
Sbjct: 61 SFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPIGDDETAVGV 120
Query: 403 GTVGSSEAIMLAGLAFKRRWQNKRKAEGKPFDKPNIITGANVQVCWEKFARYFEVELKEV 582
GTVGSSEAIMLAGLAFKR+WQN+ KAEGKP DKPNI+TGANVQVCWEKFARYFEVELKEV
Sbjct: 121 GTVGSSEAIMLAGLAFKRKWQNRMKAEGKPHDKPNIVTGANVQVCWEKFARYFEVELKEV 180
Query: 583 KLREGYYVMDPEQAVEMVDENTICVAAILGSTLNGEFEDVKRINDLLEDKNKQTGWETPI 762
KL +GYYVM+PE+AVEMVDENTICVAAILGSTLNGEFEDVK +NDLL KN +TGW TPI
Sbjct: 181 KLTQGYYVMNPEKAVEMVDENTICVAAILGSTLNGEFEDVKMLNDLLTAKNAETGWNTPI 240
Query: 763 HVDAASGGFIAPFLYPELEWDFRLPWVKSINVSGHKYGLVYPGIGWCVWRSKEDLPDELI 942
HVDAASGGFIAPF+YPELEWDFRLP VKSINVSGHKYGLVY G+GW +WR+KEDLPDELI
Sbjct: 241 HVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPDELI 300
Query: 943 FHINYLGTDQPTFTLNFSKGSSQVIAQYYQLIRHGFEGYRNIMENCQENAMVVKEGLEKT 1122
FHINYLG DQPTFTLNFSKGS+Q+IAQYYQLIR GFEGY++IM+NC++NA V++EG+EKT
Sbjct: 301 FHINYLGADQPTFTLNFSKGSNQIIAQYYQLIRLGFEGYKDIMQNCRDNATVLREGIEKT 360
Query: 1123 GRFNIVSKDEGVPLVAFSLKDHSRHDEFEISDMLRRFGWIVPAYTMPADAQHVTVLRVVI 1302
G F++VSKD GVPLVAFSLKD SR+ FE+++ LRRFGWIVPAYTMPADA+HV V+RVVI
Sbjct: 361 GHFDVVSKDSGVPLVAFSLKDSSRYTVFEVAESLRRFGWIVPAYTMPADAEHVAVMRVVI 420
Query: 1303 REEFSRTLAERLVIDIDTVMAQLDVLPSKLTPPALGLLPATLPKTVAKKTELETQKSVAA 1482
RE+FSR LAERL+ D+ +A +D K A P AKKT E +K V
Sbjct: 421 REDFSRGLAERLITDLTKTVADMDAHAVKKA--------AAEP---AKKTVREIEKEVTT 469
Query: 1483 AWKEFVLAKKTNGVC 1527
W+ FV KK++ VC
Sbjct: 470 YWRSFVARKKSSLVC 484
9636.m03649|protein glutamate decarboxylase
Length = 501
Score = 781 bits (1996), Expect = 0.0
Identities = 380/496 (76%), Positives = 433/496 (86%), Gaps = 6/496 (1%)
Frame = +1
Query: 40 MVLSRAASDTD----VSVHSTFASRYVRSSLPRYRMPENSIPKEAAYQIINDELMLDGNP 207
MV+S AA+D+D V + FASRYVR LPR+RMPE SIP+EAAYQIINDELMLDGNP
Sbjct: 1 MVVSVAATDSDTAQPVQYSTFFASRYVRDPLPRFRMPEQSIPREAAYQIINDELMLDGNP 60
Query: 208 RLNLASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFHAPLGESE 387
RLNLASFVTTWMEPECDKLIM S+NKNYVDMDEYPVTTELQNRCVNMIAHLF+AP+ E E
Sbjct: 61 RLNLASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPIKEDE 120
Query: 388 TAVGVGTVGSSEAIMLAGLAFKRRWQNKRKAEGKPFDKPNIITGANVQVCWEKFARYFEV 567
TA+GVGTVGSSEAIMLAGLAFKR+WQNKRK +GKP DKPNI+TGANVQVCWEKFARYFEV
Sbjct: 121 TAIGVGTVGSSEAIMLAGLAFKRKWQNKRKEQGKPCDKPNIVTGANVQVCWEKFARYFEV 180
Query: 568 ELKEVKLREGYYVMDPEQAVEMVDENTICVAAILGSTLNGEFEDVKRINDLLEDKNKQTG 747
ELKEVKL EGYYVMDP +AVEMVDENTICVAAILGSTL GEFEDVK +N+LL +KNK+TG
Sbjct: 181 ELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNNLLTEKNKETG 240
Query: 748 WETPIHVDAASGGFIAPFLYPELEWDFRLPWVKSINVSGHKYGLVYPGIGWCVWRSKEDL 927
W+ PIHVDAASGGFIAPFLYPELEWDFRLP VKSINVSGHKYGLVYPG+GW +WRSKEDL
Sbjct: 241 WDVPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYPGVGWVIWRSKEDL 300
Query: 928 PDELIFHINYLGTDQPTFTLNFSKGSSQVIAQYYQLIRHGFEGYRNIMENCQENAMVVKE 1107
P+ELIFHINYLGTDQPTFTLNFSKGSSQ+IAQYYQLIR GFEGY+NIM+NC EN +++E
Sbjct: 301 PEELIFHINYLGTDQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYKNIMQNCMENTAILRE 360
Query: 1108 GLEKTGRFNIVSKDEGVPLVAFSLKDHSRHDEFEISDMLRRFGWIVPAYTMPADAQHVTV 1287
G+E TGRF I+SK+ GVPLVAFSLKD R+ F+IS+ LRRFGWIVPAYTMPA+A+HV V
Sbjct: 361 GIEATGRFEILSKEAGVPLVAFSLKDSGRYTVFDISEHLRRFGWIVPAYTMPANAEHVAV 420
Query: 1288 LRVVIREEFSRTLAERLVIDIDTVMAQLDVLPSKL--TPPALGLLPATLPKTVAKKTELE 1461
LRVVIRE+FSR+LAERLV DI ++ +LD +++ A+ + V KK+ LE
Sbjct: 421 LRVVIREDFSRSLAERLVSDIVKILHELDAHSAQVLKISSAIAKQQSGDDGVVTKKSVLE 480
Query: 1462 TQKSVAAAWKEFVLAKKTNGVC 1527
T++ + A W++ V KK G+C
Sbjct: 481 TEREIFAYWRDQV-KKKQTGIC 501
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131114309
Number of Sequences: 59712
Number of extensions: 4717895
Number of successful extensions: 100021
Number of sequences better than 1.0e-10: 16
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 99879
Number of HSP's gapped (non-prelim): 28
length of query: 603
length of database: 26,991,925
effective HSP length: 53
effective length of query: 549
effective length of database: 23,827,189
effective search space: 13081126761
effective search space used: 13081126761
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 161 (67.1 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1380 Members:14 3pri:Y 7e-97
BAB32868.1 glutamate decarboxylase [Oryza sativa (japonica
cultivar-group)] dbj|BAB32870.1| glutamate decarboxylase [Oryz
(1159 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9636.m03648|protein glutamate decarboxylase 494 e-139
9636.m03649|protein glutamate decarboxylase 494 e-139
9632.m03519|protein glutamate decarboxylase 460 e-129
9631.m04991|protein glutamate decarboxylase 458 e-128
9631.m01260|protein glutamate decarboxylase 435 e-122
9632.m03523|protein glutamate decarboxylase 300 4e-81
9636.m03648|protein glutamate decarboxylase
Length = 497
Score = 494 bits (1258), Expect = e-139
Identities = 243/306 (79%), Positives = 275/306 (89%), Gaps = 9/306 (2%)
Frame = +1
Query: 28 LTEGYYVMDPKKAVEMVDENTICVAAILGSTLTGEYEDVKLLNDLLVEKNKETGWNVPIH 207
L+EGYYVMDP KAVEMVDENTICVAAILGSTLTGE+EDVKLLN+LL EKNKETGW+VPIH
Sbjct: 183 LSEGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNNLLTEKNKETGWDVPIH 242
Query: 208 VDAASGGFIAPFLQPELEWDFRLPLVKSINVSGHKYGLVYPGVGWVIWRSKDDLPEELIF 387
VDAASGGFIAPFL PELEWDFRLPLVKSINVSGHKYGLVYPGVGWVIWRSK+DLPEELIF
Sbjct: 243 VDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYPGVGWVIWRSKEDLPEELIF 302
Query: 388 HINYLGADQPTFTLNFSKGASQIIAQYYQLIRLGFEGYKHIMENCKLNAAVLKEGIDATG 567
HINYLG DQPTFTLNFSKG+SQIIAQYYQLIRLGFEGYK+IM+NC N A+L+EGI+ATG
Sbjct: 303 HINYLGTDQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYKNIMQNCMENTAILREGIEATG 362
Query: 568 RFDVLSKADGVPLVAIRLKDSTNFSVFDISENLRRFGWIVPAYTMPADAEHVAVLRIVIR 747
RF++LSK GVPLVA LKDS ++VFDISE+LRRFGWIVPAYTMPA+AEHVAVLR+VIR
Sbjct: 363 RFEILSKEAGVPLVAFSLKDSGRYTVFDISEHLRRFGWIVPAYTMPANAEHVAVLRVVIR 422
Query: 748 EDFNRSLAQRLLADINKIIGELDAHAVHAIKLSTAAA----GGDG--ASKSAVDAATEAF 909
EDF+RSLA+RL++DI KI+ ELDAH+ +K+S+A A G DG KS ++ E F
Sbjct: 423 EDFSRSLAERLVSDIVKILHELDAHSAQVLKISSAIAKQQSGDDGVVTKKSVLETEREIF 482
Query: 910 ---KDLAGKKKAGVC 945
+D KK+ G+C
Sbjct: 483 AYWRDQVKKKQTGIC 497
9636.m03649|protein glutamate decarboxylase
Length = 501
Score = 494 bits (1258), Expect = e-139
Identities = 243/306 (79%), Positives = 275/306 (89%), Gaps = 9/306 (2%)
Frame = +1
Query: 28 LTEGYYVMDPKKAVEMVDENTICVAAILGSTLTGEYEDVKLLNDLLVEKNKETGWNVPIH 207
L+EGYYVMDP KAVEMVDENTICVAAILGSTLTGE+EDVKLLN+LL EKNKETGW+VPIH
Sbjct: 187 LSEGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNNLLTEKNKETGWDVPIH 246
Query: 208 VDAASGGFIAPFLQPELEWDFRLPLVKSINVSGHKYGLVYPGVGWVIWRSKDDLPEELIF 387
VDAASGGFIAPFL PELEWDFRLPLVKSINVSGHKYGLVYPGVGWVIWRSK+DLPEELIF
Sbjct: 247 VDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYPGVGWVIWRSKEDLPEELIF 306
Query: 388 HINYLGADQPTFTLNFSKGASQIIAQYYQLIRLGFEGYKHIMENCKLNAAVLKEGIDATG 567
HINYLG DQPTFTLNFSKG+SQIIAQYYQLIRLGFEGYK+IM+NC N A+L+EGI+ATG
Sbjct: 307 HINYLGTDQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYKNIMQNCMENTAILREGIEATG 366
Query: 568 RFDVLSKADGVPLVAIRLKDSTNFSVFDISENLRRFGWIVPAYTMPADAEHVAVLRIVIR 747
RF++LSK GVPLVA LKDS ++VFDISE+LRRFGWIVPAYTMPA+AEHVAVLR+VIR
Sbjct: 367 RFEILSKEAGVPLVAFSLKDSGRYTVFDISEHLRRFGWIVPAYTMPANAEHVAVLRVVIR 426
Query: 748 EDFNRSLAQRLLADINKIIGELDAHAVHAIKLSTAAA----GGDG--ASKSAVDAATEAF 909
EDF+RSLA+RL++DI KI+ ELDAH+ +K+S+A A G DG KS ++ E F
Sbjct: 427 EDFSRSLAERLVSDIVKILHELDAHSAQVLKISSAIAKQQSGDDGVVTKKSVLETEREIF 486
Query: 910 ---KDLAGKKKAGVC 945
+D KK+ G+C
Sbjct: 487 AYWRDQVKKKQTGIC 501
9632.m03519|protein glutamate decarboxylase
Length = 484
Score = 460 bits (1170), Expect = e-129
Identities = 221/306 (72%), Positives = 258/306 (84%)
Frame = +1
Query: 28 LTEGYYVMDPKKAVEMVDENTICVAAILGSTLTGEYEDVKLLNDLLVEKNKETGWNVPIH 207
LT+GYYVM+P+KAVEMVDENTICVAAILGSTL GE+EDVK+LNDLL KN ETGWN PIH
Sbjct: 182 LTQGYYVMNPEKAVEMVDENTICVAAILGSTLNGEFEDVKMLNDLLTAKNAETGWNTPIH 241
Query: 208 VDAASGGFIAPFLQPELEWDFRLPLVKSINVSGHKYGLVYPGVGWVIWRSKDDLPEELIF 387
VDAASGGFIAPF+ PELEWDFRLPLVKSINVSGHKYGLVY GVGWVIWR+K+DLP+ELIF
Sbjct: 242 VDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPDELIF 301
Query: 388 HINYLGADQPTFTLNFSKGASQIIAQYYQLIRLGFEGYKHIMENCKLNAAVLKEGIDATG 567
HINYLGADQPTFTLNFSKG++QIIAQYYQLIRLGFEGYK IM+NC+ NA VL+EGI+ TG
Sbjct: 302 HINYLGADQPTFTLNFSKGSNQIIAQYYQLIRLGFEGYKDIMQNCRDNATVLREGIEKTG 361
Query: 568 RFDVLSKADGVPLVAIRLKDSTNFSVFDISENLRRFGWIVPAYTMPADAEHVAVLRIVIR 747
FDV+SK GVPLVA LKDS+ ++VF+++E+LRRFGWIVPAYTMPADAEHVAV+R+VIR
Sbjct: 362 HFDVVSKDSGVPLVAFSLKDSSRYTVFEVAESLRRFGWIVPAYTMPADAEHVAVMRVVIR 421
Query: 748 EDFNRSLAQRLLADINKIIGELDAHAVHAIKLSTAAAGGDGASKSAVDAATEAFKDLAGK 927
EDF+R LA+RL+ D+ K + ++DAHAV K + A + + T +A K
Sbjct: 422 EDFSRGLAERLITDLTKTVADMDAHAV---KKAAAEPAKKTVREIEKEVTTYWRSFVARK 478
Query: 928 KKAGVC 945
K + VC
Sbjct: 479 KSSLVC 484
9631.m04991|protein glutamate decarboxylase
Length = 461
Score = 458 bits (1165), Expect = e-128
Identities = 224/306 (73%), Positives = 260/306 (84%), Gaps = 9/306 (2%)
Frame = +1
Query: 28 LTEGYYVMDPKKAVEMVDENTICVAAILGSTLTGEYEDVKLLNDLLVEKNKETGWNVPIH 207
L++GYYVMDP KAV+MVDENTICVAAILGSTL GE+EDVKLLNDLL +KN ETGW+ PIH
Sbjct: 152 LSDGYYVMDPAKAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLTKKNAETGWDTPIH 211
Query: 208 VDAASGGFIAPFLQPELEWDFRLPLVKSINVSGHKYGLVYPGVGWVIWRSKDDLPEELIF 387
VDAASGGFIAPFL PELEWDFRLPLVKSINVSGHKYGLVY G+GW IWRSK+DLPEELIF
Sbjct: 212 VDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWCIWRSKEDLPEELIF 271
Query: 388 HINYLGADQPTFTLNFSKGASQIIAQYYQLIRLGFEGYKHIMENCKLNAAVLKEGIDATG 567
HINYLGADQPTFTLNFSKG+SQ+IAQYYQLIRLGFEGYK+IMENC+ NA VLK+G++ TG
Sbjct: 272 HINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYKNIMENCQENAMVLKQGLEKTG 331
Query: 568 RFDVLSKADGVPLVAIRLKDSTNFSVFDISENLRRFGWIVPAYTMPADAEHVAVLRIVIR 747
RF+++SK +GVPLVA LKDS + F+IS+ LRRFGWIVPAYTMP DA+HV VLR+VIR
Sbjct: 332 RFNIVSKDNGVPLVAFSLKDSARHNEFEISDFLRRFGWIVPAYTMPPDAQHVTVLRVVIR 391
Query: 748 EDFNRSLAQRLLADINKIIGELDAHAVHAIKLSTAAAGGDGASKSAVDAATEAFKD---- 915
EDF+R+LA+RL+ D+ K++ ELD A+ A GGD A+ SA + E ++
Sbjct: 392 EDFSRTLAERLVLDVEKVLHELD-----ALPARVVANGGDAAAASASEREMEKQREVISL 446
Query: 916 -----LAGKKKAGVC 945
LA KK GVC
Sbjct: 447 WKRAVLAKKKTNGVC 461
9631.m01260|protein glutamate decarboxylase
Length = 492
Score = 435 bits (1107), Expect = e-122
Identities = 216/306 (70%), Positives = 253/306 (82%), Gaps = 4/306 (1%)
Frame = +1
Query: 28 LTEGYYVMDPKKAVEMVDENTICVAAILGSTLTGEYEDVKLLNDLLVEKNKETGWNVPIH 207
L +GYYVMDP+KAV+MV+ENTICVAAILGSTL GE+EDVKLLNDLL +KNKETGW PIH
Sbjct: 183 LRDGYYVMDPEKAVDMVNENTICVAAILGSTLNGEFEDVKLLNDLLDKKNKETGWETPIH 242
Query: 208 VDAASGGFIAPFLQPELEWDFRLPLVKSINVSGHKYGLVYPGVGWVIWRSKDDLPEELIF 387
VDAASGGFIAPFL PELEWDFRLP VKSINVSGHKYGLVY G+GW IWR+K+DLPEELIF
Sbjct: 243 VDAASGGFIAPFLYPELEWDFRLPWVKSINVSGHKYGLVYAGIGWCIWRNKEDLPEELIF 302
Query: 388 HINYLGADQPTFTLNFSKGASQIIAQYYQLIRLGFEGYKHIMENCKLNAAVLKEGIDATG 567
HINYLG DQPTFTLNFSKG+SQ+IAQYYQLIR GFEGY++IMENC NA VLKEG+ TG
Sbjct: 303 HINYLGTDQPTFTLNFSKGSSQVIAQYYQLIRHGFEGYRNIMENCHENAMVLKEGLVKTG 362
Query: 568 RFDVLSKADGVPLVAIRLKDSTNFSVFDISENLRRFGWIVPAYTMPADAEHVAVLRIVIR 747
RFD++SK +GVPLVA LKD + F+IS+ LRRFGWIVPAYTMP DA+HV VLR+VIR
Sbjct: 363 RFDIVSKDEGVPLVAFSLKDRSRHDEFEISDMLRRFGWIVPAYTMPPDAQHVTVLRVVIR 422
Query: 748 EDFNRSLAQRLLADINKIIGELDAHAVHAIKLSTAAAGGDGASKSAVD---AATEAFKD- 915
E+F+R+LA+RL+ DI K++ +LDA + A A KS ++ + TEA+K
Sbjct: 423 EEFSRTLAERLVLDIEKVMYQLDALPSRLMPPVPPAPLLVVAKKSELETQRSVTEAWKKF 482
Query: 916 LAGKKKAGVC 945
+ K+ GVC
Sbjct: 483 VLAKRTNGVC 492
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76390959
Number of Sequences: 59712
Number of extensions: 2290651
Number of successful extensions: 24275
Number of sequences better than 1.0e-10: 12
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 24268
Number of HSP's gapped (non-prelim): 7
length of query: 386
length of database: 26,991,925
effective HSP length: 51
effective length of query: 334
effective length of database: 23,946,613
effective search space: 7998168742
effective search space used: 7998168742
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1404 Members:27 3pri:Y 2e-83
BAC20892.1 contains ESTs
AU172828(E31314),C74435(E31314)~similar to nodulin [Oryza sativa
(japonica cultivar-group)]
(1455 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9635.m03967|protein GDSL-like Lipase/Acylhydrolase 547 e-155
9635.m03968|protein GDSL-like Lipase/Acylhydrolase 499 e-141
9634.m00581|protein GDSL-like Lipase/Acylhydrolase 273 7e-73
9633.m03058|protein GDSL-like Lipase/Acylhydrolase 265 2e-70
9629.m02176|protein GDSL-like Lipase/Acylhydrolase, putative 236 5e-62
9633.m00350|protein BT004397 putative lipase 234 4e-61
9629.m02190|protein GDSL-like Lipase/Acylhydrolase 211 2e-54
9633.m00594|protein GDSL-like Lipase/Acylhydrolase, putative 203 5e-52
9633.m00595|protein hypothetical protein 198 2e-50
9629.m01130|protein GDSL-like Lipase/Acylhydrolase 189 8e-48
9635.m04499|protein GDSL-like Lipase/Acylhydrolase 188 2e-47
9631.m06399|protein GDSL-like Lipase/Acylhydrolase 187 4e-47
9634.m00552|protein GDSL-like Lipase/Acylhydrolase 187 5e-47
9633.m01065|protein GDSL-like Lipase/Acylhydrolase 185 2e-46
9631.m06200|protein putative GDSL-like lipase/acylhydrolase 184 3e-46
9629.m04101|protein GDSL-like Lipase/Acylhydrolase, putative 183 6e-46
9629.m02178|protein GDSL-like Lipase/Acylhydrolase 182 1e-45
9633.m01059|protein GDSL-like Lipase/Acylhydrolase 181 3e-45
9629.m01128|protein GDSL-like Lipase/Acylhydrolase 179 9e-45
9629.m01118|protein GDSL-like Lipase/Acylhydrolase 178 2e-44
9635.m03967|protein GDSL-like Lipase/Acylhydrolase
Length = 405
Score = 547 bits (1394), Expect = e-155
Identities = 273/384 (71%), Positives = 317/384 (82%), Gaps = 15/384 (3%)
Frame = +2
Query: 59 RARRRTTMATSKLITFVVLLVVL-----ERVRSD---ESPCDFPAIFNFGDSYSDTGAFP 214
R RRR T A V+LLVVL E SD ++PCDFPAIFNFGDS SDTG
Sbjct: 5 RRRRRCTAAPPTTAKLVLLLVVLLLQLSEGASSDGGSDAPCDFPAIFNFGDSNSDTGGLS 64
Query: 215 ALFPAVQPPYGQTFFGMPAGRQSDGRLTIDFMAQSLGLRYLNAYLDSLGSNFTQGANFAS 394
AL V PP+G+T+FGMPAGR SDGRLTIDFMAQSLG+RYL+AYLDS+GSNF+QGANFA+
Sbjct: 65 ALIAVVPPPFGRTYFGMPAGRFSDGRLTIDFMAQSLGIRYLSAYLDSVGSNFSQGANFAT 124
Query: 395 AAGTIRRVNGSLWTSGYSPISLDVQIWQFQQFINRSRFVYNNIGGIYRAILPKPDHLVSK 574
AA +IR NGS++ SG SPISLDVQ QF+QFINRS+FVY+NIGGIYR ILPK ++ S+
Sbjct: 125 AAASIRPANGSIFVSGISPISLDVQTSQFEQFINRSQFVYSNIGGIYREILPKAEYF-SR 183
Query: 575 ALYTFDIGANDLAMGYLENMTTAQVEAYVPDLMERLASAIQTVYNHGGRYFWVHNTGTLG 754
ALYTFDIG NDL MGY +NM+T QVEAYVPDLMER ++AIQ VY+ GGRYFWVHNT LG
Sbjct: 184 ALYTFDIGQNDLTMGYFDNMSTEQVEAYVPDLMERFSAAIQKVYSLGGRYFWVHNTAPLG 243
Query: 755 CLPYALVYRPDLAAEKDDAGCSVALNAGPQFFNARLKETVARLRVALPEAAFTYVDVYAA 934
CL YA+V P LAA +DDAGCSVA NA +FFNARL+ETV RLR ALP+AA TYVDVY+A
Sbjct: 244 CLTYAVVLLPKLAAPRDDAGCSVAYNAAARFFNARLRETVDRLRAALPDAALTYVDVYSA 303
Query: 935 TYKLMSEAKKFGFGDPLRVCCGYGGGQYNFDKNIRC-------GDPVLEGKSCEDPSKSV 1093
Y+L+S+AK+ GFGDPL VCCGYGGG+YNFD++IRC G VL GKSC+DPS+SV
Sbjct: 304 KYRLISQAKQLGFGDPLLVCCGYGGGEYNFDRDIRCGGKVEVNGTSVLAGKSCDDPSRSV 363
Query: 1094 SWDGVHLTEAAYKFIFDQIVDGALSDPPVPLRGACQGKG 1210
SWDGVH TEAA +F+F+ IV G LSDPPVPLR AC+ G
Sbjct: 364 SWDGVHFTEAANRFVFELIVGGKLSDPPVPLRQACRRGG 402
9635.m03968|protein GDSL-like Lipase/Acylhydrolase
Length = 391
Score = 499 bits (1270), Expect = e-141
Identities = 244/377 (64%), Positives = 292/377 (76%), Gaps = 9/377 (2%)
Frame = +2
Query: 83 ATSKLITFVVLLVVLERVR-SDESPCDFPAIFNFGDSYSDTGAFPALFPAVQPPYGQTFF 259
A + ++ V +LV++ +V + + C FPA+FNFGDS SDTG A F A PP G+TFF
Sbjct: 7 AAAVVVATVAVLVLVSQVSVAAGADCRFPAVFNFGDSNSDTGGLSATFGAAPPPNGRTFF 66
Query: 260 GMPAGRQSDGRLTIDFMAQSLGLRYLNAYLDSLGSNFTQGANFASAAGTIRRVNGSLWTS 439
GMP GR DGRL IDF+A+SLGL YL+AYL+S+GSNFTQGANFA+A +IRR N SL+ S
Sbjct: 67 GMPVGRYCDGRLVIDFIAESLGLPYLSAYLNSIGSNFTQGANFATAGSSIRRQNTSLFLS 126
Query: 440 GYSPISLDVQIWQFQQFINRSRFVYNNIGGIYRAILPKPDHLVSKALYTFDIGANDLAMG 619
G+SPISLDVQ W+F+QFINRS+FVYNN GGIYR +LPK ++ S+ALYTFDIG ND+ G
Sbjct: 127 GFSPISLDVQSWEFEQFINRSQFVYNNKGGIYRELLPKAEYF-SQALYTFDIGQNDITTG 185
Query: 620 YLENMTTAQVEAYVPDLMERLASAIQTVYNHGGRYFWVHNTGTLGCLPYALVYRPDLAAE 799
+ NMT+ QV AY+PDLMERL + IQ VY GGRYFW+HNTG +GCLPYA+V+RPDLA
Sbjct: 186 FFINMTSEQVIAYIPDLMERLTNIIQNVYGLGGRYFWIHNTGPIGCLPYAMVHRPDLAVV 245
Query: 800 KDDAGCSVALNAGPQFFNARLKETVARLRVALPEAAFTYVDVYAATYKLMSEAKKFGFGD 979
KD +GCSVA N Q FN RLKETV LR +AAFTYVDVY+A YKL+S+AKK G D
Sbjct: 246 KDGSGCSVAYNEVAQLFNQRLKETVGHLRKTHADAAFTYVDVYSAKYKLISDAKKLGMDD 305
Query: 980 PLRVCCGYGGGQYNFDKNIRCGDP-------VLEGKSCEDPSKSVSWDGVHLTEAAYKFI 1138
P+ CCGYGGG+YNFD + CG V+ GKSC+DP K VSWDGVH TEAA KF+
Sbjct: 306 PMLTCCGYGGGRYNFDDRVGCGGKVKVNGTWVVAGKSCDDPLKRVSWDGVHFTEAANKFV 365
Query: 1139 FDQIVDGALSDPPVPLRGACQ-GKGQ 1213
FDQI G LSDPPVPLR ACQ +GQ
Sbjct: 366 FDQIAGGKLSDPPVPLRQACQISRGQ 391
9634.m00581|protein GDSL-like Lipase/Acylhydrolase
Length = 379
Score = 273 bits (690), Expect = 7e-73
Identities = 149/368 (40%), Positives = 207/368 (55%), Gaps = 6/368 (1%)
Frame = +2
Query: 95 LITFVVLLVVLERVRSDESPCDFPAIFNFGDSYSDTGAFPALFPAVQPPYGQTFFGMPAG 274
L T L L S + C FPA+FNFGDS SDTG F A FPA Q P+G T+F PAG
Sbjct: 7 LATAAAALCCLVAAASATAQCRFPAVFNFGDSNSDTGGFWAAFPAQQAPFGMTYFRRPAG 66
Query: 275 RQSDGRLTIDFMAQSLGLRYLNAYLDSLGSNFTQGANFASAAGTIRRVNGSLWTSGYSPI 454
R SDGRL +DF+ Q++GL L+ YL S+GS + GANFA+ A T + N SL+ +G SP
Sbjct: 67 RASDGRLVVDFLVQAMGLPLLSPYLQSVGSGYRHGANFATLASTALQPNTSLFVTGISPF 126
Query: 455 SLDVQIWQFQQFINRSRFVYNNIGGIYRAILPKPDHLVSKALYTFDIGANDLAMGYLENM 634
L VQ+ Q ++ R++ + +N LP PD ++ ALYT DIG NDL L +
Sbjct: 127 FLAVQLNQMKEL--RTKVLTSNGNNDQ---LPAPD-VLHNALYTIDIGQNDLTSN-LGSQ 179
Query: 635 TTAQVEAYVPDLMERLASAIQTVYNHGGRYFWVHNTGTLGCLPYALVYRPDLAAEKDDAG 814
+ V+ +P ++ +++S +Q +YN G R V N +GC P L P + + D G
Sbjct: 180 SIETVKQSLPSVVSKISSTVQELYNIGARNIMVFNMAPIGCYPAFLTKLPHTSNDMDGYG 239
Query: 815 CSVALNAGPQFFNARLKETVARLRVALPEAAFTYVDVYAATYKLMSEAKKFGFGDPLRVC 994
C N+ ++N L ++A +R L +A+ Y+D +A T +L K G + C
Sbjct: 240 CMKTYNSAVTYYNELLNNSLAEVRKKLQDASIVYLDKHAVTLELFRHPKAHGLKYGTKAC 299
Query: 995 CGYGGGQYNFDKNIRCGDPVL------EGKSCEDPSKSVSWDGVHLTEAAYKFIFDQIVD 1156
CGYG G YNF+ ++ CG L K+C DP VSWDG+H TEAA K I ++
Sbjct: 300 CGYGDGAYNFNPDVYCGSSKLLNGQTVTAKACADPQNYVSWDGIHATEAANKIIASSLMS 359
Query: 1157 GALSDPPVPLRGAC 1198
G+ S PP L C
Sbjct: 360 GSYSYPPFDLSKLC 373
9633.m03058|protein GDSL-like Lipase/Acylhydrolase
Length = 388
Score = 265 bits (669), Expect = 2e-70
Identities = 142/350 (40%), Positives = 203/350 (57%), Gaps = 8/350 (2%)
Frame = +2
Query: 128 ERVRSDESPCDFPAIFNFGDSYSDTGAFPAL-FPAVQPPYGQTFFGMPAGRQSDGRLTID 304
E + + ++PA+FNFGDS SDTG A F ++ PPYG TFFG P+GR DGRL ID
Sbjct: 25 EELEASSPEFNYPAVFNFGDSNSDTGGRVAAGFESIAPPYGSTFFGSPSGRFCDGRLIID 84
Query: 305 FMAQSLGLRYLNAYLDSLGS-NFTQGANFASAAGTIRRVNGSLWTSGYSPISLDVQIWQF 481
F+ ++ + +LNAYLDS+G+ N G NFA A +I + SP S +QI QF
Sbjct: 85 FLMDAMDMPFLNAYLDSVGAPNLRAGVNFAQAGCSITPATAT----SVSPFSFGLQIKQF 140
Query: 482 QQFINRSRFVYNNIGGIYRAILPKPDHLVSKALYTFDIGANDLAMGYLENMTTAQVEAYV 661
F ++ + + G YR +P+ D+ S+ LYTFDIG NDLA G T QV A +
Sbjct: 141 FAFKDKVTKLLSK-GDTYRRYIPQSDYF-SRGLYTFDIGQNDLA-GEFYWKTEDQVAASI 197
Query: 662 PDLMERLASAIQTVYNHGGRYFWVHNTGTLGCLPYALVYRPDLAAEKDDAGCSVALNAGP 841
P ++ + ++ +Y G R FW+HNTG LGCLP + + ++ D+ C N
Sbjct: 198 PTILLEFETGLKKLYEQGARKFWIHNTGPLGCLPQNVAFFGKDRSQLDELRCVAKHNRVA 257
Query: 842 QFFNARLKETVARLRVALPEAAFTYVDVYAATYKLMSEAKKFGFGDPLRVCCGYGGGQYN 1021
+ FN +L +LR A+ TYVD+Y Y L++ ++GF +P++ CCGYGG N
Sbjct: 258 KLFNLQLHALCTKLRGEFAGASITYVDIYTIKYSLIANYSRYGFENPIQACCGYGGPPLN 317
Query: 1022 FDKNIRCGDP------VLEGKSCEDPSKSVSWDGVHLTEAAYKFIFDQIVDGALSDPP 1177
+D + CG ++ K C+D ++ V+WDG+H TEAA I QI+ G SDPP
Sbjct: 318 YDSRVPCGQTASLNGNLVTAKGCKDSTEFVNWDGIHYTEAANFHIASQILTGRYSDPP 375
9629.m02176|protein GDSL-like Lipase/Acylhydrolase, putative
Length = 436
Score = 236 bits (597), Expect = 5e-62
Identities = 143/337 (42%), Positives = 184/337 (54%), Gaps = 1/337 (0%)
Frame = +2
Query: 170 IFNFGDSYSDTGAFPALFPA-VQPPYGQTFFGMPAGRQSDGRLTIDFMAQSLGLRYLNAY 346
IFNFGDS SDTG A + P G+T+F P GR SDGRL IDF+ +SL +L+ Y
Sbjct: 101 IFNFGDSNSDTGGMAAAMGLNIALPEGRTYFRRPTGRISDGRLVIDFICESLNTPHLSPY 160
Query: 347 LDSLGSNFTQGANFASAAGTIRRVNGSLWTSGYSPISLDVQIWQFQQFINRSRFVYNNIG 526
L SLGS+F+ G NFA + GS T G S SLDVQ+ QF F RS + N
Sbjct: 161 LKSLGSDFSNGVNFA--------IGGSTATPGGSTFSLDVQLHQFLYFRTRSIELINQ-- 210
Query: 527 GIYRAILPKPDHLVSKALYTFDIGANDLAMGYLENMTTAQVEAYVPDLMERLASAIQTVY 706
G+ P A+YT DIG NDLA Y+ N+ QV A +P ++ + I+ +Y
Sbjct: 211 GVRT---PIDRDGFRNAIYTIDIGQNDLA-AYM-NLPYDQVLAKIPTIVAHIKYTIEALY 265
Query: 707 NHGGRYFWVHNTGTLGCLPYALVYRPDLAAEKDDAGCSVALNAGPQFFNARLKETVARLR 886
HGGR FWVH TG LGCLP L D ++ D GC NA + FNA+L RLR
Sbjct: 266 GHGGRKFWVHGTGALGCLPQKLSIPRDDDSDLDGNGCLKTYNAAAREFNAQLGAACRRLR 325
Query: 887 VALPEAAFTYVDVYAATYKLMSEAKKFGFGDPLRVCCGYGGGQYNFDKNIRCGDPVLEGK 1066
+ +AA + DVYAA Y L++ G PL CCG GG YN++ C +E
Sbjct: 326 QRMADAAVVFTDVYAAKYDLVANHTLHGIERPLMACCGNGGPPYNYNHFKMCMSAEME-- 383
Query: 1067 SCEDPSKSVSWDGVHLTEAAYKFIFDQIVDGALSDPPV 1180
C+ ++ SWDGVH TEAA + +++ G S PPV
Sbjct: 384 LCDMGARFASWDGVHYTEAANAIVAARVLTGEYSTPPV 421
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98833662
Number of Sequences: 59712
Number of extensions: 3150854
Number of successful extensions: 24843
Number of sequences better than 1.0e-10: 133
Number of HSP's better than 0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 24419
Number of HSP's gapped (non-prelim): 140
length of query: 485
length of database: 26,991,925
effective HSP length: 52
effective length of query: 432
effective length of database: 23,886,901
effective search space: 10319141232
effective search space used: 10319141232
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1442 Members:121 3pri:Y 9e-55
T51098 hypothetical protein p85RF [imported] - Prunus
armeniaca gb|AAD38146.1|AF139499_1 unknown [Prunus armeniaca]
(1061 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9630.m00938|protein AN1-like Zinc finger, putative 312 9e-85
9630.m00937|protein AN1-like Zinc finger, putative 312 9e-85
9634.m03943|protein AN1-like Zinc finger, putative 311 1e-84
9634.m03942|protein AN1-like Zinc finger, putative 311 1e-84
9631.m05687|protein putative zinc finger protein 147 3e-35
9631.m05686|protein putative zinc finger protein 147 3e-35
9631.m05685|protein putative zinc finger protein 147 3e-35
9635.m00681|protein AN1-like Zinc finger, putative 145 1e-34
9629.m05478|protein AN1-like Zinc finger, putative 134 3e-31
9631.m05688|protein putative zinc finger protein 133 6e-31
9636.m03986|protein AN1-like Zinc finger, putative 131 2e-30
9629.m05045|protein AN1-like Zinc finger, putative 130 4e-30
9630.m03116|protein AN1-like Zinc finger, putative 130 5e-30
9637.m02764|protein AN1-like Zinc finger, putative 123 5e-28
9636.m03396|protein AN1-like Zinc finger, putative 121 2e-27
9635.m00686|protein hypothetical protein 111 2e-24
9631.m05690|protein putative zinc finger protein 99 2e-20
9629.m05041|protein AN1-like Zinc finger, putative 68 4e-11
9630.m00938|protein AN1-like Zinc finger, putative
Length = 173
Score = 312 bits (790), Expect = 9e-85
Identities = 151/176 (85%), Positives = 159/176 (89%)
Frame = +1
Query: 106 MEHKEAGCQQPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKLAASSFDSIVNG 285
MEHKEAGCQQPEGPILC+NNCGFFGSAATMNMCSKCHKEM+MKEEQAKLAASS DSIVNG
Sbjct: 1 MEHKEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNG 60
Query: 286 GDGGKAPVVVAAVAASAEVAVAQVDVKALVVQPAADVAGTSEAVAVSPKRKEGPNRCSTC 465
DGGK +V A+ S VAVAQV+ K LVVQP DVAGTSE VAV PK KEGPNRC+TC
Sbjct: 61 CDGGKEHIVAAS--GSTAVAVAQVEAKTLVVQPT-DVAGTSEEVAVVPKVKEGPNRCATC 117
Query: 466 RKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 633
RKRVGLTGFNCRCGNMYC+LHRYSDKH+CQFDYRTAARDAIAKANPVVKAEKLDKI
Sbjct: 118 RKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
9630.m00937|protein AN1-like Zinc finger, putative
Length = 173
Score = 312 bits (790), Expect = 9e-85
Identities = 151/176 (85%), Positives = 159/176 (89%)
Frame = +1
Query: 106 MEHKEAGCQQPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKLAASSFDSIVNG 285
MEHKEAGCQQPEGPILC+NNCGFFGSAATMNMCSKCHKEM+MKEEQAKLAASS DSIVNG
Sbjct: 1 MEHKEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNG 60
Query: 286 GDGGKAPVVVAAVAASAEVAVAQVDVKALVVQPAADVAGTSEAVAVSPKRKEGPNRCSTC 465
DGGK +V A+ S VAVAQV+ K LVVQP DVAGTSE VAV PK KEGPNRC+TC
Sbjct: 61 CDGGKEHIVAAS--GSTAVAVAQVEAKTLVVQPT-DVAGTSEEVAVVPKVKEGPNRCATC 117
Query: 466 RKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 633
RKRVGLTGFNCRCGNMYC+LHRYSDKH+CQFDYRTAARDAIAKANPVVKAEKLDKI
Sbjct: 118 RKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
9634.m03943|protein AN1-like Zinc finger, putative
Length = 171
Score = 311 bits (789), Expect = 1e-84
Identities = 146/176 (82%), Positives = 159/176 (89%)
Frame = +1
Query: 106 MEHKEAGCQQPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKLAASSFDSIVNG 285
MEHKE GCQQPEGPILC+NNCGFFGSAATMNMCSKCHKEM+MK+EQAKLAASS DSIVNG
Sbjct: 1 MEHKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNG 60
Query: 286 GDGGKAPVVVAAVAASAEVAVAQVDVKALVVQPAADVAGTSEAVAVSPKRKEGPNRCSTC 465
GD GK P++ A AEVAVAQV+VK LV QPA ++AG SE V V+PK +EGPNRCSTC
Sbjct: 61 GDSGKEPII----AGHAEVAVAQVEVKTLVAQPA-EIAGPSEGVTVNPKGREGPNRCSTC 115
Query: 466 RKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 633
RKRVGLTGFNCRCGN+YC++HRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI
Sbjct: 116 RKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
9634.m03942|protein AN1-like Zinc finger, putative
Length = 171
Score = 311 bits (789), Expect = 1e-84
Identities = 146/176 (82%), Positives = 159/176 (89%)
Frame = +1
Query: 106 MEHKEAGCQQPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKLAASSFDSIVNG 285
MEHKE GCQQPEGPILC+NNCGFFGSAATMNMCSKCHKEM+MK+EQAKLAASS DSIVNG
Sbjct: 1 MEHKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNG 60
Query: 286 GDGGKAPVVVAAVAASAEVAVAQVDVKALVVQPAADVAGTSEAVAVSPKRKEGPNRCSTC 465
GD GK P++ A AEVAVAQV+VK LV QPA ++AG SE V V+PK +EGPNRCSTC
Sbjct: 61 GDSGKEPII----AGHAEVAVAQVEVKTLVAQPA-EIAGPSEGVTVNPKGREGPNRCSTC 115
Query: 466 RKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 633
RKRVGLTGFNCRCGN+YC++HRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI
Sbjct: 116 RKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
9631.m05687|protein putative zinc finger protein
Length = 160
Score = 147 bits (367), Expect = 3e-35
Identities = 73/178 (41%), Positives = 94/178 (52%)
Frame = +1
Query: 100 FKMEHKEAGCQQPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKLAASSFDSIV 279
+K E +E G PE PILCVNNCGFFGS T NMCSKC+++ V
Sbjct: 6 WKKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTV----------------- 48
Query: 280 NGGDGGKAPVVVAAVAASAEVAVAQVDVKALVVQPAADVAGTSEAVAVSPKRKEGPNRCS 459
KA V V +++ + V + + V K NRC
Sbjct: 49 ------KAKTVATVVEKKPLASLSSTPLVTEVTDGGSGSVADGKQVMEEDTPKPPSNRCL 102
Query: 460 TCRKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 633
+CRK+VGLTGF CRCG +CS+HRY+D H C FDY+ R+ IAK NP+VKA+K+ KI
Sbjct: 103 SCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72922926
Number of Sequences: 59712
Number of extensions: 2364937
Number of successful extensions: 79346
Number of sequences better than 1.0e-10: 36
Number of HSP's better than 0.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 79294
Number of HSP's gapped (non-prelim): 27
length of query: 353
length of database: 26,991,925
effective HSP length: 51
effective length of query: 302
effective length of database: 23,946,613
effective search space: 7231877126
effective search space used: 7231877126
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1459 Members:134 3pri:Y 1e-133
Q9ZRI8 Formate dehydrogenase, mitochondrial precursor
(NAD-dependent formate dehydrogenase) (FDH)
(1525 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9634.m02795|protein formate dehydrogenase, mitochondrial ... 733 0.0
9634.m02799|protein Similar to formate dehydrogenase, mit... 693 0.0
9636.m03484|protein D-3-phosphoglycerate dehydrogenase 120 5e-27
9632.m05424|protein D-3-phosphoglycerate dehydrogenase 118 2e-26
9634.m04305|protein D-3-phosphoglycerate dehydrogenase 117 4e-26
9632.m00064|protein D-isomer specific 2-hydroxyacid dehyd... 111 4e-24
9632.m00063|protein D-isomer specific 2-hydroxyacid dehyd... 111 4e-24
9632.m00072|protein Similar to AC025417 T12C24.9 104 3e-22
9632.m00070|protein D-isomer specific 2-hydroxyacid dehyd... 103 7e-22
9632.m00069|protein D-isomer specific 2-hydroxyacid dehyd... 101 5e-21
9635.m01600|protein D-isomer specific 2-hydroxyacid dehyd... 100 6e-21
9629.m01252|protein D-isomer specific 2-hydroxyacid dehyd... 93 1e-18
9635.m01592|protein hypothetical protein 76 2e-13
9630.m00016|protein hydroxypyruvate reductase 69 2e-11
9634.m02795|protein formate dehydrogenase, mitochondrial precursor
(ec 1.2.1.2) (nad-dependent formate dehydrogenase) (fdh)
Length = 376
Score = 733 bits (1871), Expect = 0.0
Identities = 353/375 (94%), Positives = 369/375 (98%)
Frame = +2
Query: 95 AMWRAAARQLVDRAVGSRAAHTSAGSKKIVGVFYQAGEYADKNPNFVGCVEGALGIRDWL 274
AMWRAAA L+ RA+GSRAAHTSAGSKKIVGVFY+ GEYADKNPNFVGCVEGALGIR+WL
Sbjct: 2 AMWRAAAGHLLGRALGSRAAHTSAGSKKIVGVFYKGGEYADKNPNFVGCVEGALGIREWL 61
Query: 275 ESKGHHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIG 454
ESKGHHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYV+AERIKKAKNLELLLTAGIG
Sbjct: 62 ESKGHHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYVSAERIKKAKNLELLLTAGIG 121
Query: 455 SDHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMRILILLRNFLPGYQQVVKGEWNVAGIA 634
SDHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMRILILLRNFLPGYQQVV GEWNVAGIA
Sbjct: 122 SDHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMRILILLRNFLPGYQQVVHGEWNVAGIA 181
Query: 635 HRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLQINPELEKEIGAKFEEDLDA 814
+RAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRL+I+PELEKEIGAK+EEDLDA
Sbjct: 182 YRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKIDPELEKEIGAKYEEDLDA 241
Query: 815 MLPKCDVVVINTPLTEKTRGMFNKEKIAKMKKGVIIVNNARGAIMDTQAVADACSSGHIA 994
MLPKCDV+VINTPLTEKTRGMFNKE+IAKMKKGVIIVNNARGAIMDTQAVADACSSG +A
Sbjct: 242 MLPKCDVIVINTPLTEKTRGMFNKERIAKMKKGVIIVNNARGAIMDTQAVADACSSGQVA 301
Query: 995 GYGGDVWFPQPAPKDHPWRYMPNHAMTPHISGTTIDAQLRYAAGVKDMLDRYFKGEEFPV 1174
GYGGDVWFPQPAPKDHPWRYMPNHAMTPHISGTTIDAQLRYAAGVKDMLDRYFKGE+FPV
Sbjct: 302 GYGGDVWFPQPAPKDHPWRYMPNHAMTPHISGTTIDAQLRYAAGVKDMLDRYFKGEDFPV 361
Query: 1175 ENYIVKEGELASQYK 1219
+NYIVKEG+LASQY+
Sbjct: 362 QNYIVKEGQLASQYQ 376
9634.m02799|protein Similar to formate dehydrogenase, mitochondrial
precursor (ec 1.2.1.2) (nad- dependent formate
dehydrogenase) (fdh). [rice]
Length = 378
Score = 693 bits (1768), Expect = 0.0
Identities = 330/375 (88%), Positives = 355/375 (94%), Gaps = 2/375 (0%)
Frame = +2
Query: 95 AMWRA--AARQLVDRAVGSRAAHTSAGSKKIVGVFYQAGEYADKNPNFVGCVEGALGIRD 268
AMWRA AA QL+ RA+ S AA TSAGSKK+VGVFY+ GEYADKNPNFVGCV+ ALGIR
Sbjct: 2 AMWRAPSAAGQLLGRALASTAAQTSAGSKKVVGVFYKGGEYADKNPNFVGCVDSALGIRG 61
Query: 269 WLESKGHHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAG 448
WLESKGH YIVTDDKEG+N ELEKHIED HVLITTPFHPAY+TAERIKKAKNLELLLTAG
Sbjct: 62 WLESKGHRYIVTDDKEGINCELEKHIEDAHVLITTPFHPAYITAERIKKAKNLELLLTAG 121
Query: 449 IGSDHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMRILILLRNFLPGYQQVVKGEWNVAG 628
+GSDHIDLPAAAAAGLTVAE+TGSNTVSVAED+LMRIL+LLRNFLPG+ Q+V GEWNVAG
Sbjct: 122 VGSDHIDLPAAAAAGLTVAEITGSNTVSVAEDQLMRILLLLRNFLPGHHQIVNGEWNVAG 181
Query: 629 IAHRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLQINPELEKEIGAKFEEDL 808
IAHR YDLEGKTVGTVGAGRIGRLLLQRLKPFNCNL+YHDR++I+PELEKEIGAK+EEDL
Sbjct: 182 IAHRTYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLMYHDRVKIDPELEKEIGAKYEEDL 241
Query: 809 DAMLPKCDVVVINTPLTEKTRGMFNKEKIAKMKKGVIIVNNARGAIMDTQAVADACSSGH 988
DAMLPKCDVVVIN PLTEKTRGMFNKE+IAKMKKGV IVNNARGAIMDTQAVADAC+SGH
Sbjct: 242 DAMLPKCDVVVINMPLTEKTRGMFNKERIAKMKKGVTIVNNARGAIMDTQAVADACASGH 301
Query: 989 IAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHISGTTIDAQLRYAAGVKDMLDRYFKGEEF 1168
+AGYGGDVWFPQPAPKDHPWRYMPNHAMTPH SGTTID QLRYAAGVKDMLDRYFKGE+F
Sbjct: 302 VAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHCSGTTIDGQLRYAAGVKDMLDRYFKGEDF 361
Query: 1169 PVENYIVKEGELASQYK 1219
P +NYIVK G+LASQY+
Sbjct: 362 PAQNYIVKAGQLASQYQ 378
9636.m03484|protein D-3-phosphoglycerate dehydrogenase
Length = 621
Score = 120 bits (299), Expect = 5e-27
Identities = 77/257 (29%), Positives = 129/257 (49%), Gaps = 1/257 (0%)
Frame = +2
Query: 392 VTAERIKKAKN-LELLLTAGIGSDHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMRILIL 568
VT E ++ + L ++ AG+G D++DL AA AG V +NTV+ AE + + +
Sbjct: 129 VTREVLEAGRGRLRVVGRAGVGIDNVDLQAATEAGCLVVNAPTANTVAAAEHGIALLASM 188
Query: 569 LRNFLPGYQQVVKGEWNVAGIAHRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHD 748
RN + G+W + L GKT+ +G G++G + +R K +++ HD
Sbjct: 189 ARNVSQADAALKAGKWQRT--KYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMHVIAHD 246
Query: 749 RLQINPELEKEIGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMFNKEKIAKMKKGVIIVN 928
+ + IGA+ D + + D + ++ PLT T +FN E ++MK GV I+N
Sbjct: 247 PYA-PADRARAIGAELVS-FDEAIGRADFISLHMPLTPATSKVFNDESFSRMKNGVRIIN 304
Query: 929 NARGAIMDTQAVADACSSGHIAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHISGTTIDAQ 1108
ARG ++D A+ A SG +A DV+ +P KD N +TPH+ +T++AQ
Sbjct: 305 VARGGVIDEDALVRALDSGKVAQAALDVFTEEPPAKDSKLVLHENVTVTPHLGASTVEAQ 364
Query: 1109 LRYAAGVKDMLDRYFKGE 1162
A + + + +GE
Sbjct: 365 EGVAIEIAEAVVGALRGE 382
9632.m05424|protein D-3-phosphoglycerate dehydrogenase
Length = 613
Score = 118 bits (293), Expect = 2e-26
Identities = 77/246 (31%), Positives = 120/246 (48%)
Frame = +2
Query: 425 LELLLTAGIGSDHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMRILILLRNFLPGYQQVV 604
L ++ AG+G D++DL AA G V +NTV+ AE + + + RN +
Sbjct: 135 LRVVGRAGVGIDNVDLAAATEHGCLVVNAPTANTVAAAEHGIALLTAMSRNIAQADASLK 194
Query: 605 KGEWNVAGIAHRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLQINPELEKEI 784
G+W + L GKT+ +G G++G + +R K +++ HD + + I
Sbjct: 195 AGKWQRN--KYVGVSLVGKTIAILGFGKVGSEVARRAKGLGMHVIAHDPYA-SADRAHAI 251
Query: 785 GAKFEEDLDAMLPKCDVVVINTPLTEKTRGMFNKEKIAKMKKGVIIVNNARGAIMDTQAV 964
G + DA L D + ++ PLT T M N E AKMKKGV I+N ARG ++D A+
Sbjct: 252 GVELVSMEDA-LTTADFISLHMPLTPATNKMLNDETFAKMKKGVRIINVARGGVIDEDAL 310
Query: 965 ADACSSGHIAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHISGTTIDAQLRYAAGVKDMLD 1144
A SG +A DV+ +P D N +TPH+ +T++AQ A + + +
Sbjct: 311 VRALDSGIVAQAALDVFTKEPPAPDSKLVLHENVTVTPHLGASTVEAQEGVAIEIAEAVI 370
Query: 1145 RYFKGE 1162
KGE
Sbjct: 371 GALKGE 376
9634.m04305|protein D-3-phosphoglycerate dehydrogenase
Length = 652
Score = 117 bits (291), Expect = 4e-26
Identities = 77/257 (29%), Positives = 127/257 (48%), Gaps = 1/257 (0%)
Frame = +2
Query: 392 VTAERIKKAKN-LELLLTAGIGSDHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMRILIL 568
VT E + A+ L ++ AG+G D++DL AA AG V +NTV+ AE + + +
Sbjct: 162 VTREVFEAARGRLRVVGRAGVGIDNVDLQAATEAGCLVVNAPTANTVAAAEHAIALLAAM 221
Query: 569 LRNFLPGYQQVVKGEWNVAGIAHRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHD 748
RN + G+W + L GKT+ +G G++G + +R K +++ HD
Sbjct: 222 ARNVAQADASLKAGKWQRN--KYVGVSLVGKTLAIMGFGKVGSEVARRAKGLGMDIISHD 279
Query: 749 RLQINPELEKEIGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMFNKEKIAKMKKGVIIVN 928
+ + IG D + D + ++ PLT T +F+ E A MKKGV I+N
Sbjct: 280 PYA-PVDRARAIGVDLVS-FDEAISTADFISLHMPLTPSTAKLFDDETFANMKKGVRIIN 337
Query: 929 NARGAIMDTQAVADACSSGHIAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHISGTTIDAQ 1108
ARG ++D A+ A +G ++ DV+ +P PKD + + +TPH+ +T +AQ
Sbjct: 338 VARGGVVDEDALLRALDNGTVSQAALDVFTEEPPPKDSKLVHHEHVTVTPHLGASTSEAQ 397
Query: 1109 LRYAAGVKDMLDRYFKGE 1162
A + + + KGE
Sbjct: 398 EGVALEIAEAVLGALKGE 415
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99273657
Number of Sequences: 59712
Number of extensions: 2787131
Number of successful extensions: 16910
Number of sequences better than 1.0e-10: 28
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 16889
Number of HSP's gapped (non-prelim): 15
length of query: 508
length of database: 26,991,925
effective HSP length: 52
effective length of query: 455
effective length of database: 23,886,901
effective search space: 10868539955
effective search space used: 10868539955
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1511 Members:9 3pri:Y 1e-123
AAD10493.1 beta-tubulin 6 [Triticum aestivum]
(1673 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m04449|protein tubulin beta subunit 876 0.0
9634.m04473|protein beta-tubulin R2242 - rice 854 0.0
9633.m03161|protein tubulin beta-5 chain (beta-5 tubulin) 849 0.0
9630.m00647|protein tubulin beta chain (fragment) 848 0.0
9631.m05571|protein beta-tubulin 848 0.0
9631.m05570|protein beta-tubulin 848 0.0
9629.m05808|protein beta-tubulin R1623 - rice 847 0.0
9629.m05807|protein beta-tubulin R1623 - rice 847 0.0
9629.m01752|protein tubulin beta-5 chain (beta-5 tubulin) 846 0.0
9631.m00057|protein Tubulin/FtsZ family, GTPase domain, p... 842 0.0
9635.m03858|protein tubulin alpha-1 chain 379 e-105
9631.m05042|protein alpha-tubulin 372 e-102
9631.m01118|protein tubulin alpha-2 chain (alpha-2 tubulin) 369 e-101
9633.m00567|protein tubulin gamma-2 chain (gamma-2 tubulin) 301 2e-81
9634.m00660|protein Similar to 133549 beta-tubulin 88 5e-17
9629.m00408|protein expressed protein 72 3e-12
9639.m04036|protein transposon protein, putative, CACTA, ... 71 4e-12
9629.m05120|protein retrotransposon protein, putative, Ty... 68 4e-11
9631.m04449|protein tubulin beta subunit
Length = 446
Score = 876 bits (2238), Expect = 0.0
Identities = 423/443 (95%), Positives = 436/443 (97%), Gaps = 3/443 (0%)
Frame = +2
Query: 89 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGQYTGTAPEQLERMDVYFNEAGGNRYV 268
MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTG YTGT+P+QLER++VYFNEA G R+V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHV 60
Query: 269 PRAVLMDLEPGTMDSLRSGPIGAIFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLDVV 448
PRAVLMDLEPGTMDSLRSGPIG IFRPDNFV+GQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 449 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 628
RKEAEN DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 629 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCL 808
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCL 240
Query: 809 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 988
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 989 CAADPRHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIPPVG 1168
CAADPRHGRYLTASAMFRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCDIPPVG
Sbjct: 301 CAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVG 360
Query: 1169 LAMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVA 1348
L+M+STFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVA
Sbjct: 361 LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVA 420
Query: 1349 EYQQYQDATAE-EYDEEE--PAGDEA 1417
EYQQYQDATAE +YDE++ A DEA
Sbjct: 421 EYQQYQDATAEDDYDEDDDAAAADEA 446
9634.m04473|protein beta-tubulin R2242 - rice
Length = 446
Score = 854 bits (2182), Expect = 0.0
Identities = 409/442 (92%), Positives = 423/442 (95%)
Frame = +2
Query: 89 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGQYTGTAPEQLERMDVYFNEAGGNRYV 268
MREILHIQGGQCGNQIGAKFWEVIC EHG+D TG+Y+G + QLER++VY+NEA G RYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 269 PRAVLMDLEPGTMDSLRSGPIGAIFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLDVV 448
PRAVLMDLEPGTMDS+RSGP G IFRPDNFV+GQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 449 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 628
RKEAEN DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 629 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCL 808
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL P+FGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
Query: 809 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 988
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 989 CAADPRHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIPPVG 1168
CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCDIPP+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIG 360
Query: 1169 LAMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVA 1348
L M+STF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT EGMDEMEFTEAESNMNDLVA
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
Query: 1349 EYQQYQDATAEEYDEEEPAGDE 1414
EYQQYQDATAEE D EE DE
Sbjct: 421 EYQQYQDATAEEEDYEEEEEDE 442
9633.m03161|protein tubulin beta-5 chain (beta-5 tubulin)
Length = 444
Score = 849 bits (2170), Expect = 0.0
Identities = 408/442 (92%), Positives = 426/442 (96%), Gaps = 2/442 (0%)
Frame = +2
Query: 89 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGQYTGTAPEQLERMDVYFNEAGGNRYV 268
MREILHIQGGQCGNQIG+KFWEV+C EHG+DPTG+Y GT+ QLER++VY+NEA R+V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFV 60
Query: 269 PRAVLMDLEPGTMDSLRSGPIGAIFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLDVV 448
PRAVLMDLEPGTMDS+R+GP G IFRPDNFV+GQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 449 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 628
RKEAEN DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 629 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCL 808
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 809 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 988
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 989 CAADPRHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIPPVG 1168
CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
Query: 1169 LAMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVA 1348
L+M+STFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT EGMDEMEFTEAESNMNDLV+
Sbjct: 361 LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 1349 EYQQYQDATAE--EYDEEEPAGDE 1414
EYQQYQDATA+ EY+EEE A E
Sbjct: 421 EYQQYQDATADEAEYEEEEDAIQE 444
9630.m00647|protein tubulin beta chain (fragment)
Length = 447
Score = 848 bits (2168), Expect = 0.0
Identities = 408/442 (92%), Positives = 423/442 (95%)
Frame = +2
Query: 89 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGQYTGTAPEQLERMDVYFNEAGGNRYV 268
MREILHIQGGQCGNQIGAKFWEVIC EHG+D TG+Y+G + QLER++VY+NEA G R+V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60
Query: 269 PRAVLMDLEPGTMDSLRSGPIGAIFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLDVV 448
PRAVLMDLEPGTMDS+RSGP G IFRPDNFV+GQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 449 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 628
RKEAEN DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 629 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCL 808
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL P+FGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
Query: 809 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 988
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 989 CAADPRHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIPPVG 1168
CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNG 360
Query: 1169 LAMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVA 1348
L M+STF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT EGMDEMEFTEAESNMNDLVA
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
Query: 1349 EYQQYQDATAEEYDEEEPAGDE 1414
EYQQYQDATA+ DEEE GDE
Sbjct: 421 EYQQYQDATAD--DEEEDYGDE 440
9631.m05571|protein beta-tubulin
Length = 444
Score = 848 bits (2166), Expect = 0.0
Identities = 408/437 (93%), Positives = 421/437 (95%), Gaps = 1/437 (0%)
Frame = +2
Query: 89 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGQYTGTAPEQLERMDVYFNEAGGNRYV 268
MREILHIQGGQCGNQIGAKFWEVIC EHGVD TG+Y G + QLER++VY+NEA G RYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 269 PRAVLMDLEPGTMDSLRSGPIGAIFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLDVV 448
PRAVLMDLEPGTMDS+RSGP G IFRPDNFV+GQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 449 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 628
RKEAEN DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 629 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCL 808
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL P+FGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
Query: 809 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 988
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 989 CAADPRHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIPPVG 1168
CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
Query: 1169 LAMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVA 1348
L M++TFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT EGMDEMEFTEAESNMNDLVA
Sbjct: 361 LKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
Query: 1349 EYQQYQDATA-EEYDEEE 1399
EYQQYQDATA EEY++EE
Sbjct: 421 EYQQYQDATADEEYEDEE 438
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122300441
Number of Sequences: 59712
Number of extensions: 4268943
Number of successful extensions: 63987
Number of sequences better than 1.0e-10: 36
Number of HSP's better than 0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 63634
Number of HSP's gapped (non-prelim): 61
length of query: 557
length of database: 26,991,925
effective HSP length: 52
effective length of query: 505
effective length of database: 23,886,901
effective search space: 12062885005
effective search space used: 12062885005
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1523 Members:143 3pri:Y 1e-114
CAD40888.1 OSJNBa0036B21.6 [Oryza sativa (japonica
cultivar-group)]
(1212 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9632.m03624|protein chlorophyll a/b-binding apoprotein CP... 475 e-134
9630.m05194|protein light-harvesting complex protein [imp... 148 1e-35
9635.m03882|protein LHCI-680, photosystem I antenna prote... 145 1e-34
9637.m02343|protein AY086461 PSI type II chlorophyll a/b-... 145 2e-34
9635.m03689|protein probable chlorophyll a/b-binding prot... 117 4e-26
9636.m03389|protein chlorophyll a/b-binding protein presu... 109 1e-23
9630.m00958|protein chlorophyll a/b-binding protein type ... 105 1e-22
9635.m03724|protein chlorophyll a-b binding protein of lh... 101 2e-21
9630.m00957|protein chlorophyll a/b-binding protein type ... 98 3e-20
9629.m05067|protein Chlorophyll A-B binding protein, puta... 97 5e-20
9637.m01516|protein chlorophyll a/b-binding protein I pre... 90 7e-18
9631.m03807|protein chlorophyll a/b binding protein 89 2e-17
9629.m03990|protein Chlorophyll A-B binding protein, puta... 88 4e-17
9634.m02114|protein chlorophyll a/b-binding protein precu... 87 6e-17
9631.m03557|protein putative protein kinase 68 3e-11
9632.m03624|protein chlorophyll a/b-binding apoprotein CP24
precursor - maize
Length = 252
Score = 475 bits (1210), Expect = e-134
Identities = 226/255 (88%), Positives = 241/255 (93%)
Frame = +1
Query: 85 MALASTSATASAAVLKNPFLGARRALANAASLGAAKPVTRRVVVVAAAADKKSWIPAFKS 264
MALASTSATASAAVLK PFLGA+RALANA + AKP RR +VV+A KKSWIPAFKS
Sbjct: 1 MALASTSATASAAVLKTPFLGAKRALANAVGVAGAKPAPRRALVVSA---KKSWIPAFKS 57
Query: 265 DAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYS 444
DAEFINP WLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIF+GQA+S
Sbjct: 58 DAEFINPPWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWS 117
Query: 445 GVPWFEAGAQPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAE 624
GVPWFEAGAQP A+APFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQ+VEWATPWSRTAE
Sbjct: 118 GVPWFEAGAQPEAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQAVEWATPWSRTAE 177
Query: 625 NFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFY 804
NF+N TGEQGYPGGKFFDPLGLGGET+DG+YIPDT+KL+RLK+AEIKH+RLAMLAMLIFY
Sbjct: 178 NFSNATGEQGYPGGKFFDPLGLGGETRDGVYIPDTDKLDRLKLAEIKHARLAMLAMLIFY 237
Query: 805 FEAGQGKTPLGALGL 849
FEAGQGKTPLGALGL
Sbjct: 238 FEAGQGKTPLGALGL 252
9630.m05194|protein light-harvesting complex protein [imported] -
Arabidopsis thaliana
Length = 261
Score = 148 bits (371), Expect = 1e-35
Identities = 103/241 (42%), Positives = 133/241 (54%), Gaps = 15/241 (6%)
Frame = +1
Query: 91 LASTSATASAAVLKNPFLGARRALANAASLGAAK-----PVTRRVVVVAAAADKKSWIPA 255
+AS A + VL L + A + S+ A R + V A+ ++ +W+P
Sbjct: 1 MASLGANSHGRVLHTCTLSPKPVTALSRSMAAIPGHHVFQSPRARIAVRASTERATWLPG 60
Query: 256 FKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQ 435
P LDG+LPGDFGFDPLGLG++PA LKWY +AEL+H R+AMA V GI
Sbjct: 61 LDP------PPHLDGTLPGDFGFDPLGLGEEPANLKWYVQAELVHCRFAMAGVAGILATD 114
Query: 436 --AYSGV----PWFEAGAQPGAVAPFSFG---SLLGTQLLLMGWVESKRWVDFFNPDSQS 588
SG+ WFEAGA F F +L QLLLMG+ E+KR++DF NP SQ+
Sbjct: 115 LIRVSGINNLPVWFEAGA-----TKFDFANTTALFFVQLLLMGFAETKRYMDFINPGSQA 169
Query: 589 VEWATPWSRTAENFANFTGEQ-GYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIK 765
E A G Q GYPGG F+PLGL D E + K+ EIK
Sbjct: 170 EEGTFLGIEAA-----LAGSQPGYPGGPLFNPLGLA---------KDIENADEAKLKEIK 215
Query: 766 HSRLAMLAMLIFYFEA 813
+ RLAM+AML F +A
Sbjct: 216 NGRLAMVAMLGFIVQA 231
9635.m03882|protein LHCI-680, photosystem I antenna protein -
barley
Length = 263
Score = 145 bits (363), Expect = 1e-34
Identities = 98/243 (40%), Positives = 131/243 (53%), Gaps = 17/243 (6%)
Frame = +1
Query: 85 MALASTSATASA------AVLKNPFLGAR----RALANAASLGAAKPVTRRVVVVAAAAD 234
MAL S S++ +A A + FLG R L A +A+ V AAA D
Sbjct: 1 MALVSASSSTTAVAALPGAARASSFLGGAGRSGRLLLRQAESSSARA---SFAVRAAAPD 57
Query: 235 KKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 414
+ W P P WLDGSLPGDFGFDPLGLG DP L+W +AEL+H RWAM
Sbjct: 58 RPIWFPGSTP------PPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGA 111
Query: 415 LGIFIGQAYSGV------PWFEAGAQPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNP 576
GIFI + + + W+ AG Q +L +L+L+GW E +RW D P
Sbjct: 112 AGIFIPEFLTKIGILNTPSWYTAGEQQYFT---DTTTLFIIELILIGWAEGRRWADIIKP 168
Query: 577 DSQSVEWATPWSRTAENFANFTG-EQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKV 753
+ + P ++ TG + GYPGG +FDPLG G EK++ L+
Sbjct: 169 GCVNTDPIFPNNK-------LTGTDVGYPGGLWFDPLGWG--------TGSPEKIKELRT 213
Query: 754 AEIKHSRLAMLAMLIFYFEA 813
EIK+ RLAMLA++ +F+A
Sbjct: 214 KEIKNGRLAMLAVMGAWFQA 233
9637.m02343|protein AY086461 PSI type II chlorophyll a/b-binding
protein, putative
Length = 381
Score = 145 bits (362), Expect = 2e-34
Identities = 81/194 (41%), Positives = 108/194 (54%), Gaps = 6/194 (3%)
Frame = +1
Query: 232 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 411
D+ W P P WLDGSLPGDFGFDPLGLG DP L+W+ +AEL+H RWAM A
Sbjct: 23 DRPLWFPGSSP------PPWLDGSLPGDFGFDPLGLGSDPELLRWFAQAELMHSRWAMLA 76
Query: 412 VLGIFIGQA------YSGVPWFEAGAQPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFN 573
V GI + + W +AGA+ P+ +L +Q+ LMGW E +RW D+ N
Sbjct: 77 VAGILVPEVLEKWGFMEDYSWIDAGARDYFADPW---TLFVSQMALMGWAEGRRWADYLN 133
Query: 574 PDSQSVEWATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKV 753
P +VE P N N + GYPGG +FD G + + + + L+
Sbjct: 134 PGCVAVEPRLP------NRRNPVPDVGYPGGLWFDWGNWGRGSPEPVMV--------LRT 179
Query: 754 AEIKHSRLAMLAMLIFYFEA 813
EIK+ RLAMLA + F+F+A
Sbjct: 180 KEIKNGRLAMLAFVGFWFQA 199
9635.m03689|protein probable chlorophyll a/b-binding protein -
rice
Length = 290
Score = 117 bits (290), Expect = 4e-26
Identities = 91/249 (36%), Positives = 133/249 (52%), Gaps = 53/249 (21%)
Frame = +1
Query: 88 ALASTSATASAAVLKNPFLGARRALANAASLGAAKPVTRRVVVVAA-AADKKSWIPAFKS 264
++A+ ++T L +P + R +A G K ++ +A D+ W P
Sbjct: 4 SVAAAASTFLGTRLADPAPQSGRIVARFGFGGGKKAAAKKAARPSAPTTDRPLWFPGA-- 61
Query: 265 DAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKW-------------------------- 366
+ P +LDGSL GD+GFDP GLGK +L++
Sbjct: 62 ----VAPDYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNNAGEIIGTRFETGE 117
Query: 367 -----------------YREAELIHGRWAMAAVLGIFIGQAYSGVPWFEAG--------A 471
+RE ELIHGRWAM A LG + +GV W +AG +
Sbjct: 118 VKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSS 177
Query: 472 QPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFANFTGEQ 651
G PFS +L+ ++L++G++E +R + +P+ +
Sbjct: 178 YLGQPLPFSISTLIWIEVLVIGYIEFQRNAE-LDPEKRL--------------------- 215
Query: 652 GYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFE-AGQGKT 828
YPGG +FDPLGL D EK ERL++AEIKH+RLAM+A L F + A GK
Sbjct: 216 -YPGGSYFDPLGLAS---------DPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKG 265
Query: 829 PL 834
PL
Sbjct: 266 PL 267
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90223617
Number of Sequences: 59712
Number of extensions: 3291918
Number of successful extensions: 79229
Number of sequences better than 1.0e-10: 30
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 79072
Number of HSP's gapped (non-prelim): 46
length of query: 404
length of database: 26,991,925
effective HSP length: 51
effective length of query: 352
effective length of database: 23,946,613
effective search space: 8429207776
effective search space used: 8429207776
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1542 Members:317 3pri:Y 1e-143
P29305 14-3-3-LIKE PROTEIN A (14-3-3A)
(1429 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m04911|protein putative 14-3-3 protein 495 e-140
9636.m03343|protein GF14-c protein - rice 440 e-123
9636.m03342|protein GF14-c protein - rice 440 e-123
9632.m03674|protein GF14-b protein - rice 432 e-121
9632.m03673|protein GF14-b protein - rice 432 e-121
9632.m03672|protein GF14-b protein - rice 432 e-121
9632.m03671|protein GF14-b protein - rice 432 e-121
9630.m03536|protein 14-3-3-like protein 421 e-117
9636.m03766|protein 14-3-3 protein 391 e-108
9639.m03104|protein GF14-d protein - rice 379 e-105
9629.m01066|protein 14-3-3 protein 272 1e-72
9639.m03609|protein Similar to 14-3-3 protein 7 204 4e-52
9631.m04911|protein putative 14-3-3 protein
Length = 260
Score = 495 bits (1262), Expect = e-140
Identities = 252/261 (96%), Positives = 258/261 (98%)
Frame = +3
Query: 159 MSTAEATREENVYMAKLAEQAERYEEMVEFMEKVAKTADVGELTVEERNLLSVAYKNVIG 338
MS AEA+REENVYMAKLAEQAERYEEMVEFMEKVAKT DVGELTVEERNLLSVAYKNVIG
Sbjct: 1 MSPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIG 60
Query: 339 ARRASWRIISSIEQKEESRGNEAYVASIKEYRTRIETELSKICDGILKLLDSHLVPSATA 518
ARRASWRIISSIEQKEESRGNEAYVASIKEYR+RIETELSKICDGILKLLDSHLVPSATA
Sbjct: 61 ARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATA 120
Query: 519 AESKVFYLKMKGDYHRYLAEFKAGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLA 698
AESKVFYLKMKGDYHRYLAEFK+GAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLA
Sbjct: 121 AESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLA 180
Query: 699 LNFSVFYYEILNSPDRACNLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSD 878
LNFSVFYYEILNSPDRACNLAKQAFD+AIAELD+LGEESYKDSTLIMQLLRDNLTLWTSD
Sbjct: 181 LNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 240
Query: 879 NAEEGGDEIKEAASKPEGEGH 941
NAE+GGDEIKEAA KPEGEGH
Sbjct: 241 NAEDGGDEIKEAA-KPEGEGH 260
9636.m03343|protein GF14-c protein - rice
Length = 256
Score = 440 bits (1120), Expect = e-123
Identities = 221/254 (87%), Positives = 236/254 (92%)
Frame = +3
Query: 177 TREENVYMAKLAEQAERYEEMVEFMEKVAKTADVGELTVEERNLLSVAYKNVIGARRASW 356
+REENVYMAKLAEQAERYEEMVE+MEKVAKT DV ELTVEERNLLSVAYKNVIGARRASW
Sbjct: 2 SREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASW 61
Query: 357 RIISSIEQKEESRGNEAYVASIKEYRTRIETELSKICDGILKLLDSHLVPSATAAESKVF 536
RI+SSIEQKEE RGNE +V IKEYR +IE ELSKICDGILKLLDSHLVPS+TAAESKVF
Sbjct: 62 RIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVF 121
Query: 537 YLKMKGDYHRYLAEFKAGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVF 716
YLKMKGDYHRYLAEFK GAERKEAAE+T+VAYK+AQDIALADL THPIRLGLALNFSVF
Sbjct: 122 YLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVF 181
Query: 717 YYEILNSPDRACNLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSDNAEEGG 896
YYEILNSPD+ACNLAKQAFDEAI+ELD+LGEESYKDSTLIMQLLRDNLTLWTSD E+GG
Sbjct: 182 YYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLTEDGG 241
Query: 897 DEIKEAASKPEGEG 938
DE+KEA+ EG
Sbjct: 242 DEVKEASKGDACEG 255
9636.m03342|protein GF14-c protein - rice
Length = 256
Score = 440 bits (1120), Expect = e-123
Identities = 221/254 (87%), Positives = 236/254 (92%)
Frame = +3
Query: 177 TREENVYMAKLAEQAERYEEMVEFMEKVAKTADVGELTVEERNLLSVAYKNVIGARRASW 356
+REENVYMAKLAEQAERYEEMVE+MEKVAKT DV ELTVEERNLLSVAYKNVIGARRASW
Sbjct: 2 SREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASW 61
Query: 357 RIISSIEQKEESRGNEAYVASIKEYRTRIETELSKICDGILKLLDSHLVPSATAAESKVF 536
RI+SSIEQKEE RGNE +V IKEYR +IE ELSKICDGILKLLDSHLVPS+TAAESKVF
Sbjct: 62 RIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVF 121
Query: 537 YLKMKGDYHRYLAEFKAGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVF 716
YLKMKGDYHRYLAEFK GAERKEAAE+T+VAYK+AQDIALADL THPIRLGLALNFSVF
Sbjct: 122 YLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVF 181
Query: 717 YYEILNSPDRACNLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSDNAEEGG 896
YYEILNSPD+ACNLAKQAFDEAI+ELD+LGEESYKDSTLIMQLLRDNLTLWTSD E+GG
Sbjct: 182 YYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLTEDGG 241
Query: 897 DEIKEAASKPEGEG 938
DE+KEA+ EG
Sbjct: 242 DEVKEASKGDACEG 255
9632.m03674|protein GF14-b protein - rice
Length = 262
Score = 432 bits (1099), Expect = e-121
Identities = 218/257 (84%), Positives = 236/257 (91%)
Frame = +3
Query: 168 AEATREENVYMAKLAEQAERYEEMVEFMEKVAKTADVGELTVEERNLLSVAYKNVIGARR 347
AE +REENVYMAKLAEQAERYEEMVEFMEKVAKT D ELTVEERNLLSVAYKNVIGARR
Sbjct: 5 AELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARR 64
Query: 348 ASWRIISSIEQKEESRGNEAYVASIKEYRTRIETELSKICDGILKLLDSHLVPSATAAES 527
ASWRIISSIEQKEESRGNE V IK+YR +IETEL+KICDGILKLL+SHLVPS+TA ES
Sbjct: 65 ASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPES 124
Query: 528 KVFYLKMKGDYHRYLAEFKAGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNF 707
KVFYLKMKGDY+RYLAEFK GAERK+AAENT+VAYK+AQDIALA+LP THPIRLGLALNF
Sbjct: 125 KVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNF 184
Query: 708 SVFYYEILNSPDRACNLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSDNAE 887
SVFYYEILNSPDRACNLAKQAFDEAI+ELD+L EESYKDSTLIMQLLRDNLTLWTSD +E
Sbjct: 185 SVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISE 244
Query: 888 EGGDEIKEAASKPEGEG 938
+ +EI+EA + EG
Sbjct: 245 DTAEEIREAPKRDSSEG 261
9632.m03673|protein GF14-b protein - rice
Length = 262
Score = 432 bits (1099), Expect = e-121
Identities = 218/257 (84%), Positives = 236/257 (91%)
Frame = +3
Query: 168 AEATREENVYMAKLAEQAERYEEMVEFMEKVAKTADVGELTVEERNLLSVAYKNVIGARR 347
AE +REENVYMAKLAEQAERYEEMVEFMEKVAKT D ELTVEERNLLSVAYKNVIGARR
Sbjct: 5 AELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARR 64
Query: 348 ASWRIISSIEQKEESRGNEAYVASIKEYRTRIETELSKICDGILKLLDSHLVPSATAAES 527
ASWRIISSIEQKEESRGNE V IK+YR +IETEL+KICDGILKLL+SHLVPS+TA ES
Sbjct: 65 ASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPES 124
Query: 528 KVFYLKMKGDYHRYLAEFKAGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNF 707
KVFYLKMKGDY+RYLAEFK GAERK+AAENT+VAYK+AQDIALA+LP THPIRLGLALNF
Sbjct: 125 KVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNF 184
Query: 708 SVFYYEILNSPDRACNLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSDNAE 887
SVFYYEILNSPDRACNLAKQAFDEAI+ELD+L EESYKDSTLIMQLLRDNLTLWTSD +E
Sbjct: 185 SVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISE 244
Query: 888 EGGDEIKEAASKPEGEG 938
+ +EI+EA + EG
Sbjct: 245 DTAEEIREAPKRDSSEG 261
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86001382
Number of Sequences: 59712
Number of extensions: 2396716
Number of successful extensions: 38296
Number of sequences better than 1.0e-10: 24
Number of HSP's better than 0.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38277
Number of HSP's gapped (non-prelim): 12
length of query: 476
length of database: 26,991,925
effective HSP length: 52
effective length of query: 423
effective length of database: 23,886,901
effective search space: 10104159123
effective search space used: 10104159123
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1543 Members:62 3pri:Y 1e-144
T06203 14-3-3 protein - barley emb|CAA74592.1| 14-3-3
protein [Hordeum vulgare]
(1166 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9632.m03674|protein GF14-b protein - rice 492 e-139
9632.m03673|protein GF14-b protein - rice 492 e-139
9632.m03672|protein GF14-b protein - rice 492 e-139
9632.m03671|protein GF14-b protein - rice 492 e-139
9630.m03536|protein 14-3-3-like protein 464 e-130
9636.m03343|protein GF14-c protein - rice 451 e-126
9636.m03342|protein GF14-c protein - rice 451 e-126
9631.m04911|protein putative 14-3-3 protein 427 e-119
9636.m03766|protein 14-3-3 protein 372 e-103
9639.m03104|protein GF14-d protein - rice 362 e-100
9629.m01066|protein 14-3-3 protein 270 3e-72
9639.m03609|protein Similar to 14-3-3 protein 7 204 3e-52
9632.m03674|protein GF14-b protein - rice
Length = 262
Score = 492 bits (1252), Expect = e-139
Identities = 252/263 (95%), Positives = 257/263 (96%)
Frame = +3
Query: 87 MSAPGELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVI 266
MSA ELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVI
Sbjct: 1 MSAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVI 60
Query: 267 GARRASWRIISSIEQKEESRGNEDRVTLIKEYRGKIETELSKICDGILKLLETHLVPSST 446
GARRASWRIISSIEQKEESRGNEDRVTLIK+YRGKIETEL+KICDGILKLLE+HLVPSST
Sbjct: 61 GARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSST 120
Query: 447 APESKVFYLKMKGDYYRYLAEFKSGPERKDAAENTMVAYKAAQDIALAELAPTHPIRLGL 626
APESKVFYLKMKGDYYRYLAEFK+G ERKDAAENTMVAYKAAQDIALAEL PTHPIRLGL
Sbjct: 121 APESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGL 180
Query: 627 ALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS 806
ALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS 240
Query: 807 DITEDTAEEEIREAPKHDSSEGQ 875
DI+EDTA EEIREAPK DSSEGQ
Sbjct: 241 DISEDTA-EEIREAPKRDSSEGQ 262
9632.m03673|protein GF14-b protein - rice
Length = 262
Score = 492 bits (1252), Expect = e-139
Identities = 252/263 (95%), Positives = 257/263 (96%)
Frame = +3
Query: 87 MSAPGELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVI 266
MSA ELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVI
Sbjct: 1 MSAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVI 60
Query: 267 GARRASWRIISSIEQKEESRGNEDRVTLIKEYRGKIETELSKICDGILKLLETHLVPSST 446
GARRASWRIISSIEQKEESRGNEDRVTLIK+YRGKIETEL+KICDGILKLLE+HLVPSST
Sbjct: 61 GARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSST 120
Query: 447 APESKVFYLKMKGDYYRYLAEFKSGPERKDAAENTMVAYKAAQDIALAELAPTHPIRLGL 626
APESKVFYLKMKGDYYRYLAEFK+G ERKDAAENTMVAYKAAQDIALAEL PTHPIRLGL
Sbjct: 121 APESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGL 180
Query: 627 ALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS 806
ALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS 240
Query: 807 DITEDTAEEEIREAPKHDSSEGQ 875
DI+EDTA EEIREAPK DSSEGQ
Sbjct: 241 DISEDTA-EEIREAPKRDSSEGQ 262
9632.m03672|protein GF14-b protein - rice
Length = 262
Score = 492 bits (1252), Expect = e-139
Identities = 252/263 (95%), Positives = 257/263 (96%)
Frame = +3
Query: 87 MSAPGELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVI 266
MSA ELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVI
Sbjct: 1 MSAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVI 60
Query: 267 GARRASWRIISSIEQKEESRGNEDRVTLIKEYRGKIETELSKICDGILKLLETHLVPSST 446
GARRASWRIISSIEQKEESRGNEDRVTLIK+YRGKIETEL+KICDGILKLLE+HLVPSST
Sbjct: 61 GARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSST 120
Query: 447 APESKVFYLKMKGDYYRYLAEFKSGPERKDAAENTMVAYKAAQDIALAELAPTHPIRLGL 626
APESKVFYLKMKGDYYRYLAEFK+G ERKDAAENTMVAYKAAQDIALAEL PTHPIRLGL
Sbjct: 121 APESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGL 180
Query: 627 ALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS 806
ALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS 240
Query: 807 DITEDTAEEEIREAPKHDSSEGQ 875
DI+EDTA EEIREAPK DSSEGQ
Sbjct: 241 DISEDTA-EEIREAPKRDSSEGQ 262
9632.m03671|protein GF14-b protein - rice
Length = 262
Score = 492 bits (1252), Expect = e-139
Identities = 252/263 (95%), Positives = 257/263 (96%)
Frame = +3
Query: 87 MSAPGELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVI 266
MSA ELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVI
Sbjct: 1 MSAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVI 60
Query: 267 GARRASWRIISSIEQKEESRGNEDRVTLIKEYRGKIETELSKICDGILKLLETHLVPSST 446
GARRASWRIISSIEQKEESRGNEDRVTLIK+YRGKIETEL+KICDGILKLLE+HLVPSST
Sbjct: 61 GARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSST 120
Query: 447 APESKVFYLKMKGDYYRYLAEFKSGPERKDAAENTMVAYKAAQDIALAELAPTHPIRLGL 626
APESKVFYLKMKGDYYRYLAEFK+G ERKDAAENTMVAYKAAQDIALAEL PTHPIRLGL
Sbjct: 121 APESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGL 180
Query: 627 ALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS 806
ALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS 240
Query: 807 DITEDTAEEEIREAPKHDSSEGQ 875
DI+EDTA EEIREAPK DSSEGQ
Sbjct: 241 DISEDTA-EEIREAPKRDSSEGQ 262
9630.m03536|protein 14-3-3-like protein
Length = 308
Score = 464 bits (1180), Expect = e-130
Identities = 235/244 (96%), Positives = 239/244 (97%)
Frame = +3
Query: 87 MSAPGELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVI 266
MS P ELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVI
Sbjct: 1 MSQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVI 60
Query: 267 GARRASWRIISSIEQKEESRGNEDRVTLIKEYRGKIETELSKICDGILKLLETHLVPSST 446
GARRASWRIISSIEQKEESRGNEDR TLIKEYRGKIETELSKICDGILKLL++HLVPSST
Sbjct: 61 GARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSST 120
Query: 447 APESKVFYLKMKGDYYRYLAEFKSGPERKDAAENTMVAYKAAQDIALAELAPTHPIRLGL 626
APESKVFYLKMKGDYYRYLAEFK+G ERKDAAENTMVAYKAAQDIALAEL PTHPIRLGL
Sbjct: 121 APESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGL 180
Query: 627 ALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS 806
ALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS 240
Query: 807 DITE 818
DI+E
Sbjct: 241 DISE 244
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75234618
Number of Sequences: 59712
Number of extensions: 2164933
Number of successful extensions: 12710
Number of sequences better than 1.0e-10: 24
Number of HSP's better than 0.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12690
Number of HSP's gapped (non-prelim): 12
length of query: 388
length of database: 26,991,925
effective HSP length: 51
effective length of query: 337
effective length of database: 23,946,613
effective search space: 8070008581
effective search space used: 8070008581
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1546 Members:30 3pri:Y 1e-120
BAB11739.1 TaWIN1 [Triticum aestivum]
(1202 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9639.m03104|protein GF14-d protein - rice 438 e-122
9631.m04911|protein putative 14-3-3 protein 428 e-119
9636.m03343|protein GF14-c protein - rice 422 e-118
9636.m03342|protein GF14-c protein - rice 422 e-118
9632.m03674|protein GF14-b protein - rice 412 e-115
9632.m03673|protein GF14-b protein - rice 412 e-115
9632.m03672|protein GF14-b protein - rice 412 e-115
9632.m03671|protein GF14-b protein - rice 412 e-115
9630.m03536|protein 14-3-3-like protein 400 e-111
9636.m03766|protein 14-3-3 protein 399 e-111
9629.m01066|protein 14-3-3 protein 274 2e-73
9639.m03609|protein Similar to 14-3-3 protein 7 204 3e-52
9639.m03104|protein GF14-d protein - rice
Length = 239
Score = 438 bits (1114), Expect = e-122
Identities = 221/238 (92%), Positives = 228/238 (94%)
Frame = +3
Query: 183 MVEFMERVAKATGGAGPGEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNE 362
MVE+MERVA+A GGA GEEL+VEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGN+
Sbjct: 1 MVEYMERVARAAGGASGGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGND 60
Query: 363 AHAATIRSYRTKIEAELAKICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFK 542
AHAATIRSYR KIEAELA+ICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFK
Sbjct: 61 AHAATIRSYRGKIEAELARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFK 120
Query: 543 SGAERKEAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAK 722
SG ERK+AAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAK
Sbjct: 121 SGDERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAK 180
Query: 723 QAFDEAISELDSLGEESYKDSTLIMQLLRDNLTLWTSDTNEDDVDEIKEAPAPKESGD 896
QAFDEAISELDSLGEESYKDSTLIMQLLRDNLTLWTSD N+D DEIKEA APKE GD
Sbjct: 181 QAFDEAISELDSLGEESYKDSTLIMQLLRDNLTLWTSDANDDGGDEIKEAAAPKEPGD 238
9631.m04911|protein putative 14-3-3 protein
Length = 260
Score = 428 bits (1088), Expect = e-119
Identities = 219/263 (83%), Positives = 237/263 (89%)
Frame = +3
Query: 105 MSPAEPTRDESVYMAKLAEQAERYEEMVEFMERVAKATGGAGPGEELSVEERNLLSVAYK 284
MSPAE +R+E+VYMAKLAEQAERYEEMVEFME+VAK T EL+VEERNLLSVAYK
Sbjct: 1 MSPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVG----ELTVEERNLLSVAYK 56
Query: 285 NVIGARRASWRIISSIEQKEEGRGNEAHAATIRSYRTKIEAELAKICDGILALLDSHLVP 464
NVIGARRASWRIISSIEQKEE RGNEA+ A+I+ YR++IE EL+KICDGIL LLDSHLVP
Sbjct: 57 NVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVP 116
Query: 465 SAGAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAESTMNAYKAAQDIALADLAPTHPIR 644
SA AAESKVFYLKMKGDYHRYLAEFKSGAERKEAAE+T+ AYK+AQDIALADL THPIR
Sbjct: 117 SATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIR 176
Query: 645 LGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNLTL 824
LGLALNFSVFYYEILNSPDRACNLAKQAFD+AI+ELD+LGEESYKDSTLIMQLLRDNLTL
Sbjct: 177 LGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTL 236
Query: 825 WTSDTNEDDVDEIKEAPAPKESG 893
WTSD ED DEIKEA P+ G
Sbjct: 237 WTSDNAEDGGDEIKEAAKPEGEG 259
9636.m03343|protein GF14-c protein - rice
Length = 256
Score = 422 bits (1074), Expect = e-118
Identities = 215/250 (86%), Positives = 229/250 (91%)
Frame = +3
Query: 123 TRDESVYMAKLAEQAERYEEMVEFMERVAKATGGAGPGEELSVEERNLLSVAYKNVIGAR 302
+R+E+VYMAKLAEQAERYEEMVE+ME+VAK EEL+VEERNLLSVAYKNVIGAR
Sbjct: 2 SREENVYMAKLAEQAERYEEMVEYMEKVAKTVDV----EELTVEERNLLSVAYKNVIGAR 57
Query: 303 RASWRIISSIEQKEEGRGNEAHAATIRSYRTKIEAELAKICDGILALLDSHLVPSAGAAE 482
RASWRI+SSIEQKEEGRGNE H I+ YR KIEAEL+KICDGIL LLDSHLVPS+ AAE
Sbjct: 58 RASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAE 117
Query: 483 SKVFYLKMKGDYHRYLAEFKSGAERKEAAESTMNAYKAAQDIALADLAPTHPIRLGLALN 662
SKVFYLKMKGDYHRYLAEFK+GAERKEAAESTM AYKAAQDIALADLAPTHPIRLGLALN
Sbjct: 118 SKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALN 177
Query: 663 FSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNLTLWTSDTN 842
FSVFYYEILNSPD+ACNLAKQAFDEAISELD+LGEESYKDSTLIMQLLRDNLTLWTSD
Sbjct: 178 FSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLT 237
Query: 843 EDDVDEIKEA 872
ED DE+KEA
Sbjct: 238 EDGGDEVKEA 247
9636.m03342|protein GF14-c protein - rice
Length = 256
Score = 422 bits (1074), Expect = e-118
Identities = 215/250 (86%), Positives = 229/250 (91%)
Frame = +3
Query: 123 TRDESVYMAKLAEQAERYEEMVEFMERVAKATGGAGPGEELSVEERNLLSVAYKNVIGAR 302
+R+E+VYMAKLAEQAERYEEMVE+ME+VAK EEL+VEERNLLSVAYKNVIGAR
Sbjct: 2 SREENVYMAKLAEQAERYEEMVEYMEKVAKTVDV----EELTVEERNLLSVAYKNVIGAR 57
Query: 303 RASWRIISSIEQKEEGRGNEAHAATIRSYRTKIEAELAKICDGILALLDSHLVPSAGAAE 482
RASWRI+SSIEQKEEGRGNE H I+ YR KIEAEL+KICDGIL LLDSHLVPS+ AAE
Sbjct: 58 RASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAE 117
Query: 483 SKVFYLKMKGDYHRYLAEFKSGAERKEAAESTMNAYKAAQDIALADLAPTHPIRLGLALN 662
SKVFYLKMKGDYHRYLAEFK+GAERKEAAESTM AYKAAQDIALADLAPTHPIRLGLALN
Sbjct: 118 SKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALN 177
Query: 663 FSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNLTLWTSDTN 842
FSVFYYEILNSPD+ACNLAKQAFDEAISELD+LGEESYKDSTLIMQLLRDNLTLWTSD
Sbjct: 178 FSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLT 237
Query: 843 EDDVDEIKEA 872
ED DE+KEA
Sbjct: 238 EDGGDEVKEA 247
9632.m03674|protein GF14-b protein - rice
Length = 262
Score = 412 bits (1047), Expect = e-115
Identities = 212/263 (80%), Positives = 232/263 (87%)
Frame = +3
Query: 114 AEPTRDESVYMAKLAEQAERYEEMVEFMERVAKATGGAGPGEELSVEERNLLSVAYKNVI 293
AE +R+E+VYMAKLAEQAERYEEMVEFME+VAK EEL+VEERNLLSVAYKNVI
Sbjct: 5 AELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDS----EELTVEERNLLSVAYKNVI 60
Query: 294 GARRASWRIISSIEQKEEGRGNEAHAATIRSYRTKIEAELAKICDGILALLDSHLVPSAG 473
GARRASWRIISSIEQKEE RGNE I+ YR KIE EL KICDGIL LL+SHLVPS+
Sbjct: 61 GARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSST 120
Query: 474 AAESKVFYLKMKGDYHRYLAEFKSGAERKEAAESTMNAYKAAQDIALADLAPTHPIRLGL 653
A ESKVFYLKMKGDY+RYLAEFK+GAERK+AAE+TM AYKAAQDIALA+L PTHPIRLGL
Sbjct: 121 APESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGL 180
Query: 654 ALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNLTLWTS 833
ALNFSVFYYEILNSPDRACNLAKQAFDEAISELD+L EESYKDSTLIMQLLRDNLTLWTS
Sbjct: 181 ALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS 240
Query: 834 DTNEDDVDEIKEAPAPKESGDGQ 902
D +ED +EI+EAP ++S +GQ
Sbjct: 241 DISEDTAEEIREAP-KRDSSEGQ 262
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81652420
Number of Sequences: 59712
Number of extensions: 2579447
Number of successful extensions: 33831
Number of sequences better than 1.0e-10: 24
Number of HSP's better than 0.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33806
Number of HSP's gapped (non-prelim): 12
length of query: 400
length of database: 26,991,925
effective HSP length: 51
effective length of query: 349
effective length of database: 23,946,613
effective search space: 8357367937
effective search space used: 8357367937
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1576 Members:8 3pri:Y 5e-61
AAB21531.1 thionin [Hordeum vulgare=barley, ssp. vulgare, leaf,
cv. Carina, Peptide, 137 aa]
(795 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9634.m03014|protein Plant thionin, putative 86 4e-21
9634.m03046|protein Plant thionin, putative 82 2e-18
9634.m03052|protein Plant thionin, putative 80 4e-15
9634.m03025|protein Plant thionin, putative 78 2e-14
9634.m03014|protein Plant thionin, putative
Length = 135
Score = 86.2 bits (210), Expect(3) = 4e-21
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Frame = +2
Query: 59 KSIKSVVICVLILGLVL--EHVQVEGKSCCKDTLARNCYNTCRFAGGSRPVCAGACRCKI 232
+ +KS+++C+L+LGLVL E +QVE KSCC T ARN YN+CRFAGGSR CA CKI
Sbjct: 2 EGVKSLIMCMLVLGLVLQQEKIQVEAKSCCPSTTARNVYNSCRFAGGSRDTCAKLSGCKI 61
Query: 233 ISGPKCPSDYPKLNLLPES 289
+ G C Y L PE+
Sbjct: 62 VDG-NCKPPYVHHTLHPEA 79
Score = 28.6 bits (62), Expect(3) = 4e-21
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 381 AGEPDVTQYCTIGCRNSVCDNM 446
A E +V +C +GC +SVC M
Sbjct: 79 AEESEVVDFCKLGCASSVCSTM 100
Score = 25.8 bits (55), Expect(3) = 4e-21
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 544 TVFRGQEMKFDMGLCSNACARFCNDGA 624
T+F +E + C+ AC RFC A
Sbjct: 102 TLFANEEANHAVDRCNEACRRFCTKEA 128
9634.m03046|protein Plant thionin, putative
Length = 140
Score = 81.5 bits (198), Expect(2) = 2e-18
Identities = 42/77 (54%), Positives = 52/77 (66%), Gaps = 2/77 (2%)
Frame = +2
Query: 59 KSIKSVVICVLILGLVL--EHVQVEGKSCCKDTLARNCYNTCRFAGGSRPVCAGACRCKI 232
K++KS ++CVL+LGLVL E ++VE KSCC T ARN YN CRFA G+R C+ CKI
Sbjct: 7 KAVKSPIMCVLVLGLVLQQETIKVEAKSCCPTTTARNIYNACRFALGTRERCSKLSGCKI 66
Query: 233 ISGPKCPSDYPKLNLLPES 289
+ G KC Y L PES
Sbjct: 67 VDG-KCKPPYIHHTLYPES 84
Score = 30.5 bits (67), Expect(2) = 2e-18
Identities = 10/21 (47%), Positives = 15/21 (70%)
Frame = +3
Query: 387 EPDVTQYCTIGCRNSVCDNMD 449
E DV +C +GC +S+C NM+
Sbjct: 86 ESDVLDFCMLGCTSSMCSNMN 106
9634.m03052|protein Plant thionin, putative
Length = 135
Score = 80.4 bits (195), Expect = 4e-15
Identities = 48/120 (40%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Frame = +2
Query: 59 KSIKSVVICVLILGLVL--EHVQVEGKSCCKDTLARNCYNTCRFAGGSRPVCAGACRCKI 232
K +KS+++CVL+LGLVL E ++V KSCC T ARN YN CRFA G+R C+ CKI
Sbjct: 2 KGVKSLIMCVLVLGLVLQQETIKVGAKSCCPTTTARNIYNACRFAHGTRERCSKLSGCKI 61
Query: 233 ISGPKCPSDYPKLNLLPESGKRYHCYSFQLVHNDLLT*NYLHTYCSNYFGR*T--RCHSV 406
+ G KC Y L PES + F ++ + ++T+ N G RC+
Sbjct: 62 VDG-KCKPPYIHHTLHPES-EELDVLDFCMLGCTSSVCSNINTFAGNEEGNGAVERCNEA 119
Query: 407 LHHW 418
+H+
Sbjct: 120 CYHF 123
9634.m03025|protein Plant thionin, putative
Length = 112
Score = 77.6 bits (188), Expect = 2e-14
Identities = 38/73 (52%), Positives = 46/73 (62%), Gaps = 2/73 (2%)
Frame = +2
Query: 59 KSIKSVVICVLILGLVL--EHVQVEGKSCCKDTLARNCYNTCRFAGGSRPVCAGACRCKI 232
+ +KS+++C L+LGLVL E + VE KSCC T RN YN+CRFAGGSR CA CK
Sbjct: 2 EGVKSLIMCALVLGLVLQQEKIHVEAKSCCPSTSVRNVYNSCRFAGGSREACAKLSTCKH 61
Query: 233 ISGPKCPSDYPKLNL 277
G C Y L L
Sbjct: 62 FDG-SCQPPYDHLTL 75
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43144475
Number of Sequences: 59712
Number of extensions: 975339
Number of successful extensions: 1871
Number of sequences better than 1.0e-10: 8
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1859
Number of HSP's gapped (non-prelim): 11
length of query: 265
length of database: 26,991,925
effective HSP length: 50
effective length of query: 214
effective length of database: 24,006,325
effective search space: 5137353550
effective search space used: 5137353550
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 157 (65.6 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1603 Members:54 3pri:Y 9e-73
P46294 40S RIBOSOMAL PROTEIN S16 pir||T04083 probable
ribosomal protein S16 - rice
(1284 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9640.m00219|protein ribosomal protein S9 287 3e-77
9639.m00247|protein ribosomal protein S9 287 3e-77
9635.m00415|protein PsbP 146 1e-34
9635.m00416|protein PsbP 146 1e-34
9640.m00219|protein ribosomal protein S9
Length = 149
Score = 287 bits (726), Expect = 3e-77
Identities = 140/149 (93%), Positives = 145/149 (96%)
Frame = +2
Query: 62 MAAVLTRPTPGTVQCFGRKKTAVAVAYCKPGRGLIKVNGAPIELIRPEMLRLKAFEPILL 241
MAA LTRP PGTVQCFGRKKTAVAV+YCKPGRGLIKVNG PIELIRPEMLRLKAFEPILL
Sbjct: 1 MAAALTRPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILL 60
Query: 242 AGRSRFKDIDMRIRVRGGGKTSQIYSIRQAIAKSLVAYYQKYVDEAAKKEVKEIFGRYDR 421
AGRSRFKDIDMRIRVRGGGKTSQIY+IRQAIAK+LVAYYQKYVDEA+KKEVK+IF RYDR
Sbjct: 61 AGRSRFKDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDR 120
Query: 422 TLLVADPRRCEPKKFGGRGARARFQKSYR 508
TLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 121 TLLVADPRRCEPKKFGGRGARARFQKSYR 149
9639.m00247|protein ribosomal protein S9
Length = 149
Score = 287 bits (726), Expect = 3e-77
Identities = 140/149 (93%), Positives = 145/149 (96%)
Frame = +2
Query: 62 MAAVLTRPTPGTVQCFGRKKTAVAVAYCKPGRGLIKVNGAPIELIRPEMLRLKAFEPILL 241
MAA LTRP PGTVQCFGRKKTAVAV+YCKPGRGLIKVNG PIELIRPEMLRLKAFEPILL
Sbjct: 1 MAAALTRPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILL 60
Query: 242 AGRSRFKDIDMRIRVRGGGKTSQIYSIRQAIAKSLVAYYQKYVDEAAKKEVKEIFGRYDR 421
AGRSRFKDIDMRIRVRGGGKTSQIY+IRQAIAK+LVAYYQKYVDEA+KKEVK+IF RYDR
Sbjct: 61 AGRSRFKDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDR 120
Query: 422 TLLVADPRRCEPKKFGGRGARARFQKSYR 508
TLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 121 TLLVADPRRCEPKKFGGRGARARFQKSYR 149
9635.m00415|protein PsbP
Length = 254
Score = 146 bits (364), Expect = 1e-34
Identities = 69/77 (89%), Positives = 74/77 (95%)
Frame = +2
Query: 902 TANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWF 1081
TAN+LESSAPVV GKQYYS+TVLTRTADGDEGGKHQLITATV DGKLY+CKAQAGDKRWF
Sbjct: 178 TANILESSAPVVGGKQYYSVTVLTRTADGDEGGKHQLITATVNDGKLYICKAQAGDKRWF 237
Query: 1082 KGAKKFVENAAGSFSVA 1132
KGA+KFVE+AA SFSVA
Sbjct: 238 KGARKFVESAASSFSVA 254
9635.m00416|protein PsbP
Length = 234
Score = 146 bits (364), Expect = 1e-34
Identities = 69/77 (89%), Positives = 74/77 (95%)
Frame = +2
Query: 902 TANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWF 1081
TAN+LESSAPVV GKQYYS+TVLTRTADGDEGGKHQLITATV DGKLY+CKAQAGDKRWF
Sbjct: 158 TANILESSAPVVGGKQYYSVTVLTRTADGDEGGKHQLITATVNDGKLYICKAQAGDKRWF 217
Query: 1082 KGAKKFVENAAGSFSVA 1132
KGA+KFVE+AA SFSVA
Sbjct: 218 KGARKFVESAASSFSVA 234
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82715117
Number of Sequences: 59712
Number of extensions: 2551597
Number of successful extensions: 35597
Number of sequences better than 1.0e-10: 8
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35593
Number of HSP's gapped (non-prelim): 4
length of query: 428
length of database: 26,991,925
effective HSP length: 52
effective length of query: 375
effective length of database: 23,886,901
effective search space: 8957587875
effective search space used: 8957587875
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1604 Members:289 3pri:Y 1e-108
Q00434 Oxygen-evolving enhancer protein 2, chloroplast
precursor (OEE2) (23 kDa subunit of oxygen evolving system of
(1093 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9635.m00415|protein PsbP 418 e-117
9635.m00416|protein PsbP 388 e-108
9635.m00415|protein PsbP
Length = 254
Score = 418 bits (1063), Expect = e-117
Identities = 213/259 (82%), Positives = 234/259 (90%), Gaps = 2/259 (0%)
Frame = +3
Query: 39 MASTSCFLHQSTARLAAS-ARPAPAVGRTQLFVCKAHKNDEAASDAAVVTSRRAALSLLA 215
MASTSCFLHQSTAR+AA A P+PA RT L VC+A K D+A SRRAAL+LLA
Sbjct: 1 MASTSCFLHQSTARVAARVASPSPAT-RTHLLVCRAQKQDDAD------VSRRAALALLA 53
Query: 216 GA-AAVAVKVSPAAAAYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQ 392
GA AAV VKV+PAAAAYGEAANVFGK K NT+F+AYSGEGFKL+IP+KWNPSKEREFPGQ
Sbjct: 54 GATAAVGVKVAPAAAAYGEAANVFGKPKTNTEFIAYSGEGFKLLIPSKWNPSKEREFPGQ 113
Query: 393 VLRYEDNFDATSNLSVIINPTTKKTITDYGSPEEFLSQVGFLLGQQSYGGKTDSEGGFES 572
VLRYEDNFDA SN+SVIINPTTKKTIT++GSPEEFL+QV FLLG+Q+Y GKTDSEGGFES
Sbjct: 114 VLRYEDNFDANSNVSVIINPTTKKTITEFGSPEEFLAQVDFLLGKQAYSGKTDSEGGFES 173
Query: 573 DAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGD 752
DAVATAN+LESSAPVV GKQYYS+TVLTRTADGDEGGKHQLITATV DGKLY+CKAQAGD
Sbjct: 174 DAVATANILESSAPVVGGKQYYSVTVLTRTADGDEGGKHQLITATVNDGKLYICKAQAGD 233
Query: 753 KRWFKGAKKFVENAAGSFSVA 815
KRWFKGA+KFVE+AA SFSVA
Sbjct: 234 KRWFKGARKFVESAASSFSVA 254
9635.m00416|protein PsbP
Length = 234
Score = 388 bits (987), Expect = e-108
Identities = 197/259 (76%), Positives = 217/259 (83%), Gaps = 1/259 (0%)
Frame = +3
Query: 39 MASTSCFLHQSTARLAAS-ARPAPAVGRTQLFVCKAHKNDEAASDAAVVTSRRAALSLLA 215
MASTSCFLHQSTAR+AA A P+PA RT L VC+A K D+A
Sbjct: 1 MASTSCFLHQSTARVAARVASPSPAT-RTHLLVCRAQKQDDA------------------ 41
Query: 216 GAAAVAVKVSPAAAAYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQV 395
V+PAAAAYGEAANVFGK K NT+F+AYSGEGFKL+IP+KWNPSKEREFPGQV
Sbjct: 42 -------DVAPAAAAYGEAANVFGKPKTNTEFIAYSGEGFKLLIPSKWNPSKEREFPGQV 94
Query: 396 LRYEDNFDATSNLSVIINPTTKKTITDYGSPEEFLSQVGFLLGQQSYGGKTDSEGGFESD 575
LRYEDNFDA SN+SVIINPTTKKTIT++GSPEEFL+QV FLLG+Q+Y GKTDSEGGFESD
Sbjct: 95 LRYEDNFDANSNVSVIINPTTKKTITEFGSPEEFLAQVDFLLGKQAYSGKTDSEGGFESD 154
Query: 576 AVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDK 755
AVATAN+LESSAPVV GKQYYS+TVLTRTADGDEGGKHQLITATV DGKLY+CKAQAGDK
Sbjct: 155 AVATANILESSAPVVGGKQYYSVTVLTRTADGDEGGKHQLITATVNDGKLYICKAQAGDK 214
Query: 756 RWFKGAKKFVENAAGSFSVA 815
RWFKGA+KFVE+AA SFSVA
Sbjct: 215 RWFKGARKFVESAASSFSVA 234
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75724717
Number of Sequences: 59712
Number of extensions: 2602938
Number of successful extensions: 50363
Number of sequences better than 1.0e-10: 4
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50358
Number of HSP's gapped (non-prelim): 2
length of query: 364
length of database: 26,991,925
effective HSP length: 51
effective length of query: 312
effective length of database: 23,946,613
effective search space: 7471343256
effective search space used: 7471343256
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1616 Members:13 3pri:Y 2e-92
AAK20055.1 putative cellulase [Oryza sativa (japonica
cultivar-group)] gb|AAP54882.1| putative cellulase [Oryza sativa (j
(1214 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9638.m03607|protein putative cellulase 481 e-136
9631.m00083|protein Glycosyl hydrolases family 16, putative 471 e-133
9635.m02900|protein Glycosyl hydrolases family 16, putative 430 e-120
9630.m05762|protein Glycosyl hydrolases family 16, putative 347 2e-95
9630.m00257|protein Glycosyl hydrolases family 16, putative 213 6e-55
9631.m01289|protein ETAG-A3 209 7e-54
9634.m04706|protein xyloglucan endo-1,4-beta-D-glucanase ... 205 1e-52
9634.m01292|protein AL161535 endoxyloglucan transferase-l... 202 1e-51
9634.m04701|protein xyloglucan endo-1,4-beta-D-glucanase ... 194 3e-49
9634.m04703|protein xyloglucan endo-1,4-beta-D-glucanase ... 192 1e-48
9637.m01980|protein U43487 xyloglucan endotransglycosylas... 191 2e-48
9630.m04561|protein xyloglucan endo-1,4-beta-D-glucanase ... 191 2e-48
9638.m03909|protein putative endoxyloglucan transferase 191 2e-48
9635.m03416|protein Glycosyl hydrolases family 16, putative 190 4e-48
9636.m01388|protein xyloglucan endotransglycosylase 187 3e-47
9632.m04973|protein xyloglucan endotransglycosylase 186 8e-47
9632.m05240|protein Glycosyl hydrolases family 16, putative 183 7e-46
9632.m04972|protein Glycosyl hydrolases family 16, putative 181 2e-45
9636.m01377|protein end-xyloglucan transferase (EC 2.4.1.... 180 3e-45
9636.m01378|protein end-xyloglucan transferase (EC 2.4.1.... 167 3e-41
9638.m03607|protein putative cellulase
Length = 306
Score = 481 bits (1226), Expect = e-136
Identities = 221/295 (74%), Positives = 249/295 (83%), Gaps = 3/295 (1%)
Frame = +1
Query: 70 PHDAISHLMVIVVGAVILLQGEAQPSPGYYPSSKVSSTPFSQWYSTLWGPQHQSLSPDQT 249
P A L+++++ ++L EAQPSPGYYPS S F + YSTLWGPQHQ+LS DQ
Sbjct: 10 PGSACIPLLILLLLLLLLHPSEAQPSPGYYPSKMFRSMAFYEGYSTLWGPQHQTLSQDQK 69
Query: 250 ALTLWMDRSSGSGFKSKRSYRNGYFGVSMKVQPGYTAGVNTAFYLSNNEVYPGYHDEIDV 429
+LTLWMDRSSGSGFKS RSYRNGYFG S++VQPGYTAGVNTAFYLSN E YPG+HDEID+
Sbjct: 70 SLTLWMDRSSGSGFKSTRSYRNGYFGASIRVQPGYTAGVNTAFYLSNTEQYPGHHDEIDM 129
Query: 430 ELLGTVPGEPYTLQTNVYVRGTGDAHPIVGREMRFHLWFDPAAAFHHYAVLWNPDEIVFL 609
ELLGTVPGEPYTLQTNVYVRG+GD + IVGREMRFHLWFDP A FHHYA+LWNPD+I+FL
Sbjct: 130 ELLGTVPGEPYTLQTNVYVRGSGDGN-IVGREMRFHLWFDPTAGFHHYAILWNPDQILFL 188
Query: 610 VDDVPVRRYQKKVEATFPEREMWAYGSVWDASDWATDGGRYRSDYRYQPFVSGFKDFKVA 789
VDDVP+RRY+KKVE TFPEREMWAYGS+WDASDWATDGGRYR+DYRYQPFVS F D KV
Sbjct: 189 VDDVPIRRYEKKVEGTFPEREMWAYGSIWDASDWATDGGRYRADYRYQPFVSRFADLKVG 248
Query: 790 GCEVGAPASCRPVPAGPGGG---LSAQQSAAMSWAQQRAMVYYYCQDGSKDRSNYPEC 954
GC AP +C PVPA GGG LS QQ AAM+WAQ+ AMVYYYCQD S+D + YPEC
Sbjct: 249 GCATAAPPACSPVPASSGGGSAALSPQQEAAMAWAQRNAMVYYYCQDYSRDHTFYPEC 306
9631.m00083|protein Glycosyl hydrolases family 16, putative
Length = 310
Score = 471 bits (1200), Expect = e-133
Identities = 216/288 (75%), Positives = 244/288 (84%), Gaps = 4/288 (1%)
Frame = +1
Query: 91 LMVIVVGAVILLQGE-AQPSPGYYPSSKVSSTPFSQWYSTLWGPQHQSLSPDQTALTLWM 267
+MV+V + ++ G AQPSPGYYPS + S F + Y LWG QHQ+LS DQTALT+WM
Sbjct: 20 IMVVVACSNYMISGAGAQPSPGYYPSKTIRSMAFGEGYDNLWGGQHQTLSADQTALTVWM 79
Query: 268 DRSSGSGFKSKRSYRNGYFGVSMKVQPGYTAGVNTAFYLSNNEVYPGYHDEIDVELLGTV 447
DRSSGSGFKSKRSYRNGYFG S+KV GYTAGVNTAFYLSNNE+YPG HDEID+ELLGTV
Sbjct: 80 DRSSGSGFKSKRSYRNGYFGASIKVPSGYTAGVNTAFYLSNNELYPGQHDEIDIELLGTV 139
Query: 448 PGEPYTLQTNVYVRGTGDAHPIVGREMRFHLWFDPAAAFHHYAVLWNPDEIVFLVDDVPV 627
PGEP+TLQTNVYV GTGD I+GREMRFHLWFDP A FHHYA+LWNPD IVFLVDDVPV
Sbjct: 140 PGEPWTLQTNVYVHGTGDG-AIIGREMRFHLWFDPTADFHHYAILWNPDHIVFLVDDVPV 198
Query: 628 RRYQKKVEATFPEREMWAYGSVWDASDWATDGGRYRSDYRYQPFVSGFKDFKVAGCEVGA 807
RRY + TFP+R+MWAYGS+WDASDWATDGGRY+SDYRYQPFVS ++D K+AGCE A
Sbjct: 199 RRYPRAAGNTFPDRQMWAYGSIWDASDWATDGGRYKSDYRYQPFVSRYRDLKIAGCEAAA 258
Query: 808 PASCRPVPAGPGGG---LSAQQSAAMSWAQQRAMVYYYCQDGSKDRSNYPEC 954
PASC+PVPA P G LSAQQ AAM WAQQR+MVYYYCQD S++ +NYPEC
Sbjct: 259 PASCQPVPASPSGATGELSAQQKAAMRWAQQRSMVYYYCQDYSRNHANYPEC 310
9635.m02900|protein Glycosyl hydrolases family 16, putative
Length = 301
Score = 430 bits (1095), Expect = e-120
Identities = 195/291 (67%), Positives = 230/291 (79%), Gaps = 1/291 (0%)
Frame = +1
Query: 82 ISHLMVIVVGAVILLQGEAQPSPGYYPSSKVSSTPFSQWYSTLWGPQHQSLSPDQTALTL 261
++ L+V V + AQPSPGYYPSS + FS+ Y+ WGPQHQ+LS DQ++LT+
Sbjct: 11 VAGLLVAVAAIMAASPAGAQPSPGYYPSSVHRAMAFSRDYTNKWGPQHQTLSADQSSLTI 70
Query: 262 WMDRSSGSGFKSKRSYRNGYFGVSMKVQPGYTAGVNTAFYLSNNEVYPGYHDEIDVELLG 441
W+D++ GSGFKS++SYRNGYF +K+ GYTAG NTAFYLSNNE +PG+HDEID+E LG
Sbjct: 71 WLDKTCGSGFKSRKSYRNGYFAARVKLPAGYTAGTNTAFYLSNNEAHPGFHDEIDMEFLG 130
Query: 442 TVPGEPYTLQTNVYVRGTGDAHPIVGREMRFHLWFDPAAAFHHYAVLWNPDEIVFLVDDV 621
T+PGEPYTLQTNVYVRG+GD IVGREMRFHLWFDP A FHHYA+LWNPD I F VDDV
Sbjct: 131 TIPGEPYTLQTNVYVRGSGDGR-IVGREMRFHLWFDPTADFHHYAILWNPDAITFFVDDV 189
Query: 622 PVRRYQKKVEATFPEREMWAYGSVWDASDWATDGGRYRSDYRYQPFVSGFKDFKVAGCEV 801
P+RRY++K E TFP+R MW YGS+WDASDWATD GR+R+DYRYQPFV+ F F VAGC
Sbjct: 190 PIRRYERKSELTFPDRPMWVYGSIWDASDWATDDGRHRADYRYQPFVARFDRFTVAGCAP 249
Query: 802 GAPASCRPVPAGP-GGGLSAQQSAAMSWAQQRAMVYYYCQDGSKDRSNYPEC 954
APASCRPVPA P G GL+ +Q AAM WAQQ MVYYYCQD +D S PEC
Sbjct: 250 SAPASCRPVPASPAGAGLTPRQYAAMRWAQQSHMVYYYCQDYRRDHSLTPEC 301
9630.m05762|protein Glycosyl hydrolases family 16, putative
Length = 327
Score = 347 bits (882), Expect = 2e-95
Identities = 162/292 (55%), Positives = 207/292 (70%), Gaps = 5/292 (1%)
Frame = +1
Query: 79 AISHLMVIVVGAVILLQGEAQPSPGYYPSSKVSSTPFSQWYSTLWGPQHQS--LSPDQTA 252
A + +V ++ V+ EAQPSPG YPS + F + + +LWG +HQ + +T
Sbjct: 14 AAAATLVALMAVVVAAAAEAQPSPGVYPSRMFRAREFGRDFRSLWGAEHQQQEAAAPETG 73
Query: 253 LTLWMDRSSGSGFKSKRSYRNGYFGVSMKVQPGYTAGVNTAFYLSNNEVYPGYHDEIDVE 432
+T+W+DR SGSGFKS+R+YR+GYFG +++Q GYTAGV TAFYLSN E +PG+HDE+D+E
Sbjct: 74 VTVWLDRRSGSGFKSRRAYRSGYFGAWVRLQRGYTAGVITAFYLSNGEAHPGWHDEVDME 133
Query: 433 LLGTVPGEPYTLQTNVYVRGTGDAHPIVGREMRFHLWFDPAAAFHHYAVLWNPDEIVFLV 612
LGT PG+PYTLQTNV+ G+GD +GRE++FHLWFDP A FHHYA+LW D I+FLV
Sbjct: 134 FLGTTPGKPYTLQTNVFSLGSGDPPRSLGREIKFHLWFDPTADFHHYAILWTSDHIIFLV 193
Query: 613 DDVPVRRYQKKV---EATFPEREMWAYGSVWDASDWATDGGRYRSDYRYQPFVSGFKDFK 783
DDVP+RRY ++ A FP R MW YGS+WDAS WAT+ GRYR+DY YQPFV+ F F
Sbjct: 194 DDVPIRRYGRRSAGGAAGFPARPMWVYGSIWDASSWATEDGRYRADYSYQPFVARFSAFL 253
Query: 784 VAGCEVGAPASCRPVPAGPGGGLSAQQSAAMSWAQQRAMVYYYCQDGSKDRSNYPEC 954
+ GC AP +C A G L+A Q AAM WAQ+ MVY YC D +D S PEC
Sbjct: 254 LRGCSPHAPRTC---AAPVAGDLTAAQLAAMRWAQRFHMVYNYCYDPKRDHSLTPEC 307
9630.m00257|protein Glycosyl hydrolases family 16, putative
Length = 340
Score = 213 bits (536), Expect = 6e-55
Identities = 117/294 (39%), Positives = 168/294 (56%), Gaps = 13/294 (4%)
Frame = +1
Query: 100 IVVGAVILLQGEAQPSPGYYPSSKVSSTPFSQWYSTLWGPQHQSLSPDQTALTLWMDRSS 279
++V ++ A + + V++ F + Y+ L+G + S D ++L +DRS+
Sbjct: 6 LLVATAVVAAAAAVVAAAALEAINVTTVAFEEGYTPLFGFDNILRSADDRTVSLLLDRST 65
Query: 280 GSGFKSKRSYRNGYFGVSMKVQPGYTAGVNTAFYLSNNEVYPGYHDEIDVELLGTVPGEP 459
GSGF S Y++G+F S+K+ YTAGV AFY SN +V HDE+D E LG + G+P
Sbjct: 66 GSGFMSSSMYQHGFFSASIKLPSDYTAGVVVAFYTSNGDVIEKRHDELDFEFLGNIRGKP 125
Query: 460 YTLQTNVYVRGTGDAHPIVGREMRFHLWFDPAAAFHHYAVLWNPDEIVFLVDDVPVRRYQ 639
+ +QTNVY G+ GRE R+ L FDP FH Y++LW IVF VDDVP+R +
Sbjct: 126 WRVQTNVYGNGSVSR----GREERYLLPFDPTTEFHRYSILWTRAAIVFFVDDVPIREVR 181
Query: 640 KKVEAT--FPEREMWAYGSVWDASDWATDGGRYRSDYRYQPFVSGFKDFKVAGCEVGAP- 810
+ T FP + M Y +VWDAS WAT GGRYR +YRY PFV+ F D + GC VG P
Sbjct: 182 RTPAMTGDFPSKPMSIYATVWDASTWATSGGRYRVNYRYGPFVASFTDLALLGCRVGDPI 241
Query: 811 ------ASCRPVP----AGPGGGLSAQQSAAMSWAQQRAMVYYYCQDGSKDRSNYPEC*E 960
A+C A ++ ++ AM +++ MVY YC D + + + EC
Sbjct: 242 GQMLSSAACTAAEDALLASDLAVMTLEKQQAMRRFREQNMVYSYCYDTLRYPAPFLECDV 301
Query: 961 APSSSQR 981
S +R
Sbjct: 302 VESERRR 308
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88105827
Number of Sequences: 59712
Number of extensions: 2998804
Number of successful extensions: 38111
Number of sequences better than 1.0e-10: 54
Number of HSP's better than 0.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 37929
Number of HSP's gapped (non-prelim): 58
length of query: 404
length of database: 26,991,925
effective HSP length: 51
effective length of query: 353
effective length of database: 23,946,613
effective search space: 8453154389
effective search space used: 8453154389
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1634 Members:124 3pri:Y 1e-113
T11577 type IIIa membrane protein cp-wap13 - cowpea
gb|AAB61672.1| type IIIa membrane protein cp-wap13 [Vigna unguicu
(1614 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m03874|protein reversibly glycosylated polypeptide 674 0.0
9635.m04138|protein reversibly glycosylated polypeptide 656 0.0
9632.m05508|protein Reversibly glycosylated polypeptide 322 1e-87
9629.m05120|protein retrotransposon protein, putative, Ty... 80 1e-14
9633.m03752|protein retrotransposon protein, putative, un... 73 2e-12
9629.m00408|protein expressed protein 70 9e-12
9631.m06019|protein expressed protein 68 5e-11
9631.m03874|protein reversibly glycosylated polypeptide
Length = 364
Score = 674 bits (1721), Expect = 0.0
Identities = 307/337 (91%), Positives = 325/337 (96%)
Frame = +1
Query: 115 PLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTRTVMVPEGFDYELYNRNDI 294
PLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPT+T+ VPEGFDYELYNRNDI
Sbjct: 16 PLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKTIRVPEGFDYELYNRNDI 75
Query: 295 NRILGPKASCISFKDSACRCFGYMVSKKKYVYTIDDDCFVAKDPTGKDIDALAKHIQNLL 474
NRILGPKASCISFKDSACRCFGYMVSKKKYV+TIDDDCFVAKDP+GKDI+AL +HI+NLL
Sbjct: 76 NRILGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPSGKDINALEQHIKNLL 135
Query: 475 CPSTPLFFNTLYDPYQEGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPRER 654
PSTP FFNTLYDPY+EGADFVRGYPFSLREG TAVSHGLWLNIPDYDAPTQ+VKPRER
Sbjct: 136 SPSTPFFFNTLYDPYREGADFVRGYPFSLREGAKTAVSHGLWLNIPDYDAPTQMVKPRER 195
Query: 655 NGRYVDAVMTIPKGSLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCVKV 834
N RYVDAVMT+PKG+LFPMCGMNLAFDR+LIGPAMYFGLMGDGQPIGRYDDMWAGWC+KV
Sbjct: 196 NSRYVDAVMTVPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCMKV 255
Query: 835 ICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQAAKLTKECDTVQKC 1014
ICDHL LGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQ A + KECDTVQKC
Sbjct: 256 ICDHLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNATIPKECDTVQKC 315
Query: 1015 YISLSQQVKEKLGKIDPYFVKLADAMVTWIEAWDMLN 1125
Y+SL++QV+EKLGKIDPYFVKLADAMVTWIEAWD LN
Sbjct: 316 YLSLAEQVREKLGKIDPYFVKLADAMVTWIEAWDELN 352
9635.m04138|protein reversibly glycosylated polypeptide
Length = 366
Score = 656 bits (1675), Expect = 0.0
Identities = 300/349 (85%), Positives = 323/349 (91%)
Frame = +1
Query: 115 PLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTRTVMVPEGFDYELYNRNDI 294
PLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDP +T+ VPEGFDYELYNR+DI
Sbjct: 14 PLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPKKTIRVPEGFDYELYNRDDI 73
Query: 295 NRILGPKASCISFKDSACRCFGYMVSKKKYVYTIDDDCFVAKDPTGKDIDALAKHIQNLL 474
NRILGP+ASCISFKDSACRCFGYMVSKKKY+YTIDDDCFVAKDP+GKDI+AL +HI+NLL
Sbjct: 74 NRILGPRASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLL 133
Query: 475 CPSTPLFFNTLYDPYQEGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPRER 654
PSTP FFNTLYDPY++GADFVRGYPFSLREG PTAVSHGLWLNIPDYDAPTQLVKP ER
Sbjct: 134 NPSTPFFFNTLYDPYRDGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQLVKPLER 193
Query: 655 NGRYVDAVMTIPKGSLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCVKV 834
N RYVDAVMTIPKG+LFPMCGMNLAFDR+LIGPAMYFGLMGDGQPIGRYDDMWAGWC KV
Sbjct: 194 NSRYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCTKV 253
Query: 835 ICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQAAKLTKECDTVQKC 1014
I DHLGLGVKTGLPYIWHSKASNPFVNLKKEY GIFWQE++IPFFQ+A L KE DTVQKC
Sbjct: 254 ITDHLGLGVKTGLPYIWHSKASNPFVNLKKEYNGIFWQEELIPFFQSASLPKEADTVQKC 313
Query: 1015 YISLSQQVKEKLGKIDPYFVKLADAMVTWIEAWDMLNSKDSKEADANGS 1161
Y+ L++QV+ KLGK+D YF KLAD+MVTWIEAWD LN A ANG+
Sbjct: 314 YLELAKQVRAKLGKVDGYFNKLADSMVTWIEAWDQLNPPKGAVATANGT 362
9632.m05508|protein Reversibly glycosylated polypeptide
Length = 407
Score = 322 bits (817), Expect = 1e-87
Identities = 162/328 (49%), Positives = 225/328 (68%), Gaps = 6/328 (1%)
Frame = +1
Query: 130 ELDIVIPTIR-NLD-FLEMWRPFFQPYHLIIVQDGDPTRTVMVPEGFDYELYNRNDINRI 303
E+DIVI ++ NL F E WRPFF +H+I+V+D D + +P GFD ++Y ++D+ +
Sbjct: 69 EVDIVIAALQPNLTTFFEAWRPFFSRFHIIVVKDPDMAEELQIPTGFDLKVYTKSDMG-V 127
Query: 304 LGPKASCISFKDSACRCFGYMVSKKKYVYTIDDDCFVAKDPTGKDIDALAKHIQNLLCPS 483
LG A+ I F +CR FGY+VS+KKYV +IDD+C AKD G +DA+A+H+ NL P+
Sbjct: 128 LG--ATSIDFSGHSCRYFGYLVSRKKYVISIDDNCLPAKDNGGLTVDAVAQHMSNLKTPA 185
Query: 484 TPLFFNTLYDPYQEGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPRERNGR 663
TP FFNTLYDP+++GADFVRGYPFSLREGV +S GLWL+ DYD T +VK +RN
Sbjct: 186 TPFFFNTLYDPFRKGADFVRGYPFSLREGVECMLSCGLWLHNADYDPMTHVVKRNQRNTT 245
Query: 664 YVDAVMTIPKGSLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYD---DMWAGWCVKV 834
YVDAVMT+P G++ P+ G+N+AF+RE++GP M+ L + R+D D+W G C KV
Sbjct: 246 YVDAVMTVPLGAMMPVSGINVAFNREVLGPVMFPALRLRKEGKHRWDTLEDVWNGLCAKV 305
Query: 835 ICDHLGLGVKTGLPYIWHSKA-SNPFVNLKKEYKGIFWQEDIIPFFQAAKLTKECDTVQK 1011
+CD L GVKTGLPY+ S A + + KE++G+ + ++PFF++ KL+ TV+
Sbjct: 306 VCDRLRYGVKTGLPYVMRSDAEAGKALESLKEWEGVKVMDVVLPFFESLKLSSTSVTVED 365
Query: 1012 CYISLSQQVKEKLGKIDPYFVKLADAMVTWIEAW 1113
C L+ VKEKLG + F K ADAM W + W
Sbjct: 366 CVKELTSIVKEKLGPQNAIFAKAADAMEEWTKLW 399
9629.m05120|protein retrotransposon protein, putative, Ty3-gypsy
sub-class
Length = 662
Score = 79.6 bits (193), Expect = 1e-14
Identities = 109/343 (31%), Positives = 141/343 (40%), Gaps = 50/343 (14%)
Frame = +2
Query: 137 TSSSRRSGTWTSSRCGGPSSSRTTSSSCRTATPRGPSWCLRASTTSSTTATTSTASSAPR 316
T S S T ++ GG + T S + P PS +T T T S AP
Sbjct: 155 TPPSPSSDTSPTTPGGGGGYTPTPSDA-----PPSPSSDTSPTTPGGGGGYTPTPSDAPP 209
Query: 317 PPASPSRTPPAAASATWSPRRSTSTPSTTTASSPRTPRG------RTSTRWPSTSRTCSA 478
P+S + ++P S + PS ++ SSP TP G S PS S S
Sbjct: 210 SPSSDTSPTTPGGGGGYTPTPSDTPPSPSSGSSPTTPGGGGGYTPTPSDTPPSPSSGSSR 269
Query: 479 RPRRSSSTPCTTHTRRAPTSCAATRSASGRACPPPYR------TASGSTSPTT------- 619
STP T AP+S + + G PP + S TSPTT
Sbjct: 270 TTPGGCSTPTPCGTPPAPSSGTSPTTPGGSYYPPTPSIGDVPPSPSSDTSPTTPGGGSPS 329
Query: 620 ----TPPRSWSSRGSATAGTST-PS*PSPRD-PSSPCAA*TSPSTASSSARPCTSASWAT 781
TPP S T G P PS D P SP + TSPST S ++ A
Sbjct: 330 TPCDTPPSPSSGTSPTTPGGGYYPPTPSVGDVPPSPASG-TSPSTPGSGGYSPSTPCSAP 388
Query: 782 ASPSDATTTCGPAGVLR*SA--------------TTLGSESRRGCPTSGTARPATRS*T* 919
SPS T+ P G S TT G + PT G P+ S T
Sbjct: 389 PSPSSGTSPTTPGGGYSPSTPCNAPPSPSSDTSPTTPGGGNYPPAPTIGNVPPSPSSGT- 447
Query: 920 RRSTRESSGRRTSSPS-----SRPRS*PRSATPCRSATSRSRSRSRRSSARSTHTSSSSP 1084
S G +SSP+ P S TP + S S T P
Sbjct: 448 --SPSTPGGGCSSSPTPCDAPPSPSSDTSPTTPGGGYYPPTPSIGTSPSTPGTGGGYYPP 505
Query: 1085 TPWSPGSRP------GTCSTPRTPRRPTPTAAS 1165
+P + G P T S+P +P PTP +++
Sbjct: 506 SPSTGGYTPTPDVPISTPSSPYSPLVPTPPSST 538
Score = 73.7 bits (178), Expect = 8e-13
Identities = 95/331 (28%), Positives = 120/331 (35%), Gaps = 8/331 (2%)
Frame = +2
Query: 158 GTWTSSRCGGPSSSRTTSSSCRTATPRGPSWCLRASTTSSTTATTSTASSAPRPPASPSR 337
GT ++ GG + T S TP PS ST +++ T AP P+S +
Sbjct: 84 GTSPTTPGGGGGYTPTPSD-----TPPSPSSDTSPSTPGGGCSSSPTPCDAPPSPSSDTS 138
Query: 338 TPPAAASATWSPRRSTSTPSTTTASSPRTPRGRTSTRWPSTSRTCSARPRRSSSTPCTT- 514
+SP S + PS ++ +SP TP G T A P SS T TT
Sbjct: 139 PTTPGGGGGYSPTPSDTPPSPSSDTSPTTPGGGGG----YTPTPSDAPPSPSSDTSPTTP 194
Query: 515 --HTRRAPTSCAATRSASGRACPPPYRTASGST-SPTTTPPRSWSSRGSATAGTSTPS*P 685
PT A S S P G T +P+ TPP S T G P
Sbjct: 195 GGGGGYTPTPSDAPPSPSSDTSPTTPGGGGGYTPTPSDTPPSPSSGSSPTTPGGGGGYTP 254
Query: 686 SPRDPSSPCAA*TSPSTASSSARPCTSASWATASPSDATTTCG--PAGVLR*SATTLGSE 859
+P D T PS +S S+R T T CG PA S TT G
Sbjct: 255 TPSD--------TPPSPSSGSSR-------TTPGGCSTPTPCGTPPAPSSGTSPTTPGGS 299
Query: 860 SRRGCPTSGTARPATRS*T*RRSTRESSGRRTSSPSSRPRS*PRSATPCRSATSRSRSRS 1039
P+ G P+ S T S G S+P P S +P
Sbjct: 300 YYPPTPSIGDVPPSPSSDT---SPTTPGGGSPSTPCDTPPSPSSGTSPTTPGGGYYPPTP 356
Query: 1040 RRSSARSTHTSSSSP-TPWSPGSRPGT-CSTPRTPRRPT 1150
+ S +SP TP S G P T CS P +P T
Sbjct: 357 SVGDVPPSPASGTSPSTPGSGGYSPSTPCSAPPSPSSGT 395
9633.m03752|protein retrotransposon protein, putative, unclassified
Length = 796
Score = 72.6 bits (175), Expect = 2e-12
Identities = 92/283 (32%), Positives = 138/283 (48%), Gaps = 28/283 (9%)
Frame = +2
Query: 299 ASSAPRPPASPSRTPPAAASATWSPRRSTSTPSTTTASSPRTPRGRTSTRWPSTSRTCSA 478
A P P P RT ++S T + R S S +++P P S PS T +
Sbjct: 32 AEKTPSPNILPKRTATRSSSTTRASRLSVSQTENGHSTAPTRPARSNSVTRPSIQSTLMS 91
Query: 479 RPRR---------SSSTPCTTHTRRAPTSCAATRSASGRACPPPYRTASGSTSPTTTPPR 631
R S S+ TT +RR+ T A +S + + P P R+++ + +TP +
Sbjct: 92 SSNRTAVLNTSISSVSSRPTTPSRRSSTVVAPKQSIAA-SRPVPARSSTPVKTRPSTPTK 150
Query: 632 SWSSRGSATAGTSTPS*PSPRDPSSPCAA*TSPSTASSSARPCTSASWATASPSDATTTC 811
+ S T T+ + S AA T T++ ++RP T S + A P+ ++
Sbjct: 151 TRPSTPVRTRQTANST-------SDSAAART---TSAQNSRPSTPTSRSRAMPNSSSGAI 200
Query: 812 GPAGVLR*SATTLGSESRRGCPT-SGTARPATRS*T*RRSTRESSGRRTSSPSSRPRS*P 988
PA + R A+T+ + SR T S T+RP + S +R +S ++ P S RS
Sbjct: 201 -PA-MSRPGASTISATSRSNASTISATSRPGSSSSNVPGISRATSLSSSTVP-SMSRSSS 257
Query: 989 RSATPCRSATSRS------RSRS-RRSSARSTHTSS----------SSPTPWSPGSRPGT 1117
RS+TP R RS RS S RSS+ S+ TSS +S +P SRP +
Sbjct: 258 RSSTPTRQPAMRSSAPAVGRSPSVGRSSSISSLTSSINRPAANGGRNSAPSSAPSSRPSS 317
Query: 1118 CS-TPRTPRRP 1147
PR P RP
Sbjct: 318 PGPRPRAPVRP 328
Score = 71.8 bits (173), Expect = 3e-12
Identities = 104/323 (32%), Positives = 135/323 (41%), Gaps = 6/323 (1%)
Frame = +2
Query: 197 SRTTSSSCRTATPRGPSWCLRASTTSSTTATTSTASS---APRPPASPSRTPPAAASATW 367
S SSS RTA S+ SS T S SS AP+ + SR PA +S
Sbjct: 87 STLMSSSNRTAVLN-----TSISSVSSRPTTPSRRSSTVVAPKQSIAASRPVPARSSTPV 141
Query: 368 SPRRSTSTPSTTTASSP-RTPRGRTSTRWPSTSRTCSARPRRSSSTPCTTHTRRAPTSCA 544
R STP+ T S+P RT + ST + +RT SA+ R STP T+ +R P S
Sbjct: 142 KTR--PSTPTKTRPSTPVRTRQTANSTSDSAAARTTSAQNSR-PSTP-TSRSRAMPNS-- 195
Query: 545 ATRSASGRACPPPYRTASGSTSPTTTPPRSWSSRGSATAGTSTPS*PSPRDPSSPCAA*T 724
S A P R + + S T+ S S + TS P S P A
Sbjct: 196 -----SSGAIPAMSRPGASTISATS------RSNASTISATSRPGSSSSNVPGISRATSL 244
Query: 725 SPSTASSSARPCTSASWATASPSDATTTCGPAGVLR*SATTLGSESRRGCPTSGTARPAT 904
S ST S +R + +S T P A + PA V R + ++G S TS RPA
Sbjct: 245 SSSTVPSMSRSSSRSSTPTRQP--AMRSSAPA-VGR--SPSVGRSSSISSLTSSINRPA- 298
Query: 905 RS*T*RRSTRESSGRRTSSPSSRPRS*PRSATPCRSATSRSRSRSRRSSARSTHTSSSSP 1084
++G R S+PSS P S P S P A R + + + P
Sbjct: 299 -----------ANGGRNSAPSSAPSSRPSSPGPRPRAPVRPLDIPDFPNETPPNLRTKLP 347
Query: 1085 -TPWSPG-SRPGTCSTPRTPRRPTPTAAS 1165
P S G SRPG R+ P+AAS
Sbjct: 348 ERPLSAGRSRPGMALGVRSTSNTEPSAAS 376
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111661367
Number of Sequences: 59712
Number of extensions: 3595589
Number of successful extensions: 41093
Number of sequences better than 1.0e-10: 14
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 40831
Number of HSP's gapped (non-prelim): 46
length of query: 538
length of database: 26,991,925
effective HSP length: 52
effective length of query: 485
effective length of database: 23,886,901
effective search space: 11585146985
effective search space used: 11585146985
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1644 Members:247 3pri:Y 1e-114
AAM88439.1 putative Rieske Fe-S precursor protein [Triticum
aestivum]
(1195 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9635.m03667|protein Rieske Fe-S precursor protein 404 e-112
9635.m03667|protein Rieske Fe-S precursor protein
Length = 225
Score = 404 bits (1027), Expect = e-112
Identities = 193/221 (87%), Positives = 206/221 (92%), Gaps = 4/221 (1%)
Frame = +3
Query: 126 MASTALSTASNPTQLCRTRASSLCKPVKGLGFGRERIPRN---ITCMAGS-ISADRVPDM 293
MASTALSTASNPTQLCR+RAS L KPVKGLGFGRER+PR ITC A S I ADRVPDM
Sbjct: 1 MASTALSTASNPTQLCRSRAS-LGKPVKGLGFGRERVPRTATTITCQAASSIPADRVPDM 59
Query: 294 SKRELMNLLLLGAISLPTFGMLVPYGSFLVPAGSGSNAGGVAAKDKLGNDILVEDWLKTH 473
KR+LMNLLLLGAISLPT GMLVPYG+F +PAGSG+ GG AKDKLGND+L E+WLKTH
Sbjct: 60 GKRQLMNLLLLGAISLPTVGMLVPYGAFFIPAGSGNAGGGQVAKDKLGNDVLAEEWLKTH 119
Query: 474 GPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWNAAENKFLCPCHGSQY 653
GPNDRTL QGLKGDPTYLVVE+DKTLATYGINAVCTHLGCVVPWNAAENKF+CPCHGSQY
Sbjct: 120 GPNDRTLTQGLKGDPTYLVVEADKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQY 179
Query: 654 NNQGKVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWW 788
NNQG+VVRGPAPLSLALVHADVDDGKV+FVPWVETDFRTG+NPWW
Sbjct: 180 NNQGRVVRGPAPLSLALVHADVDDGKVLFVPWVETDFRTGDNPWW 224
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83521576
Number of Sequences: 59712
Number of extensions: 2783519
Number of successful extensions: 68900
Number of sequences better than 1.0e-10: 2
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68897
Number of HSP's gapped (non-prelim): 1
length of query: 398
length of database: 26,991,925
effective HSP length: 51
effective length of query: 346
effective length of database: 23,946,613
effective search space: 8285528098
effective search space used: 8285528098
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 159 (66.3 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1646 Members:68 3pri:Y 1e-104
P14654 GLUTAMINE SYNTHETASE ROOT ISOZYME
(GLUTAMATE--AMMONIA LIGASE) (CLONE LAMBDA-GS8)
(1449 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m01150|protein Glutamine synthetase, catalytic domai... 683 0.0
9630.m04922|protein Glutamine synthetase, catalytic domai... 661 0.0
9631.m04931|protein putative glutamine synthetase 630 e-180
9632.m05496|protein Glutamine synthetase, catalytic domai... 434 e-121
9633.m03752|protein retrotransposon protein, putative, un... 68 3e-11
9631.m01150|protein Glutamine synthetase, catalytic domain, putative
Length = 357
Score = 683 bits (1744), Expect = 0.0
Identities = 316/353 (89%), Positives = 336/353 (94%)
Frame = +3
Query: 78 MASLADLVNLNLSDCTDKVIVEYLWVGGSGIDIRSKARTVNGPITDASQLPKWNYDGSST 257
MA+L DLVNLNLSDC+DK+I EY+WVGGSGID+RSKARTV GPITD SQLPKWNYDGSST
Sbjct: 1 MANLTDLVNLNLSDCSDKIIAEYIWVGGSGIDLRSKARTVKGPITDVSQLPKWNYDGSST 60
Query: 258 GQAPGEDSEVILYPQAIFKDPFRRGDNILVMCDCYTPQGVPIPTNKRHNAAKIFNSAKVA 437
GQAPGEDSEVILYPQAIFKDPFRRGDNILVMCDCYTPQG PIPTNKRH+AAKIF+ V
Sbjct: 61 GQAPGEDSEVILYPQAIFKDPFRRGDNILVMCDCYTPQGEPIPTNKRHSAAKIFSHPDVV 120
Query: 438 AEETWYGIEQEYTLLQKDVNWPLGWPIGGYPGPQGPYYCAAGADKAFGRDIVDAHYKACL 617
AE WYGIEQEYTLLQKDVNWPLGWP+GG+PGPQGPYYCAAGA+KAFGRDIVDAHYKAC+
Sbjct: 121 AEVPWYGIEQEYTLLQKDVNWPLGWPVGGFPGPQGPYYCAAGAEKAFGRDIVDAHYKACI 180
Query: 618 YAGINISGINGEVMPGQWEFQVGPSVGIAASDQLWVARYILERITEVAGVVLSLDPKPIP 797
YAGINISGINGEVMPGQWEFQVGPSVGIAA+DQ+WVARYILER+TEVAGVVLSLDPKPIP
Sbjct: 181 YAGINISGINGEVMPGQWEFQVGPSVGIAAADQVWVARYILERVTEVAGVVLSLDPKPIP 240
Query: 798 GDWNGAGAHTNYSTKSMRQAGGYEVIKKAIEKLGKRHMQHIAAYGEGNERRLTGHHETAD 977
GDWNGAGAHTN+STKSMR+ GGYEVIKKAI+KL RH +HIAAYGEGNERRLTG HETAD
Sbjct: 241 GDWNGAGAHTNFSTKSMREPGGYEVIKKAIDKLALRHKEHIAAYGEGNERRLTGRHETAD 300
Query: 978 INTFKWGVADRGASIRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAETTLL 1136
INTFKWGVA+RGASIRVGRDTEK+GKGYFEDRRPASNMDPYVVT MIAETTLL
Sbjct: 301 INTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTGMIAETTLL 353
9630.m04922|protein Glutamine synthetase, catalytic domain, putative
Length = 356
Score = 661 bits (1687), Expect = 0.0
Identities = 298/353 (84%), Positives = 333/353 (93%)
Frame = +3
Query: 78 MASLADLVNLNLSDCTDKVIVEYLWVGGSGIDIRSKARTVNGPITDASQLPKWNYDGSST 257
MASL DLVNLNLSD T+K+I EY+W+GGSG+D+RSKART++GP+TD S+LPKWNYDGSST
Sbjct: 1 MASLTDLVNLNLSDTTEKIIAEYIWIGGSGMDLRSKARTLSGPVTDPSKLPKWNYDGSST 60
Query: 258 GQAPGEDSEVILYPQAIFKDPFRRGDNILVMCDCYTPQGVPIPTNKRHNAAKIFNSAKVA 437
GQAPGEDSEVILYPQAIFKDPFR+G+NILVMCDCYTP G PIPTNKRHNAAKIF+S +VA
Sbjct: 61 GQAPGEDSEVILYPQAIFKDPFRKGNNILVMCDCYTPAGEPIPTNKRHNAAKIFSSPEVA 120
Query: 438 AEETWYGIEQEYTLLQKDVNWPLGWPIGGYPGPQGPYYCAAGADKAFGRDIVDAHYKACL 617
+EE WYGIEQEYTLLQKD+NWPLGWP+GG+PGPQGPYYC GADK+FGRDIVD+HYKACL
Sbjct: 121 SEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCGIGADKSFGRDIVDSHYKACL 180
Query: 618 YAGINISGINGEVMPGQWEFQVGPSVGIAASDQLWVARYILERITEVAGVVLSLDPKPIP 797
YAGINISGINGEVMPGQWEFQVGPSVGI+A DQ+WVARYILERITE+AGVV+S DPKPIP
Sbjct: 181 YAGINISGINGEVMPGQWEFQVGPSVGISAGDQVWVARYILERITEIAGVVVSFDPKPIP 240
Query: 798 GDWNGAGAHTNYSTKSMRQAGGYEVIKKAIEKLGKRHMQHIAAYGEGNERRLTGHHETAD 977
GDWNGAGAHTNYSTKSMR GGYE+IK AIEKL RH +HI+AYGEGNERRLTG HETAD
Sbjct: 241 GDWNGAGAHTNYSTKSMRNDGGYEIIKSAIEKLKLRHKEHISAYGEGNERRLTGRHETAD 300
Query: 978 INTFKWGVADRGASIRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAETTLL 1136
INTF WGVA+RGAS+RVGR+TE++GKGYFEDRRPASNMDPY+VTSMIAETT++
Sbjct: 301 INTFSWGVANRGASVRVGRETEQNGKGYFEDRRPASNMDPYIVTSMIAETTII 353
9631.m04931|protein putative glutamine synthetase
Length = 370
Score = 630 bits (1607), Expect = e-180
Identities = 284/350 (81%), Positives = 321/350 (91%)
Frame = +3
Query: 87 LADLVNLNLSDCTDKVIVEYLWVGGSGIDIRSKARTVNGPITDASQLPKWNYDGSSTGQA 266
L DLVNL+LS+ TDKVI EY+WVGG+G+D+RSKART++GP+ D S+LPKWN+DGSSTGQA
Sbjct: 6 LTDLVNLDLSESTDKVIAEYIWVGGTGMDVRSKARTLSGPVDDPSKLPKWNFDGSSTGQA 65
Query: 267 PGEDSEVILYPQAIFKDPFRRGDNILVMCDCYTPQGVPIPTNKRHNAAKIFNSAKVAAEE 446
G+DSEVIL+PQAIF+DPFR+G NILVMCDCY P G PIPTN R+NAA+IF+ V AEE
Sbjct: 66 TGDDSEVILHPQAIFRDPFRKGKNILVMCDCYAPNGEPIPTNNRYNAARIFSHPDVKAEE 125
Query: 447 TWYGIEQEYTLLQKDVNWPLGWPIGGYPGPQGPYYCAAGADKAFGRDIVDAHYKACLYAG 626
WYGIEQEYTLLQK +NWPLGWP+GGYPGPQGPYYCAAGADK++GRDIVDAHYKACL+AG
Sbjct: 126 PWYGIEQEYTLLQKHINWPLGWPLGGYPGPQGPYYCAAGADKSYGRDIVDAHYKACLFAG 185
Query: 627 INISGINGEVMPGQWEFQVGPSVGIAASDQLWVARYILERITEVAGVVLSLDPKPIPGDW 806
INISGIN EVMPGQWEFQ+GP VG++A D +WVARYILERITE+AGVV+S DPKPIPGDW
Sbjct: 186 INISGINAEVMPGQWEFQIGPVVGVSAGDHVWVARYILERITEIAGVVVSFDPKPIPGDW 245
Query: 807 NGAGAHTNYSTKSMRQAGGYEVIKKAIEKLGKRHMQHIAAYGEGNERRLTGHHETADINT 986
NGAGAHTNYSTKSMR GGYEVIKKAI+KLG RH +HIAAYG+GNERRLTG HETADIN
Sbjct: 246 NGAGAHTNYSTKSMRSNGGYEVIKKAIKKLGMRHREHIAAYGDGNERRLTGRHETADINN 305
Query: 987 FKWGVADRGASIRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAETTLL 1136
F WGVA+RGAS+RVGRDTEKDGKGYFEDRRPASNMDPY+VT+MIAETT+L
Sbjct: 306 FVWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYLVTAMIAETTIL 355
9632.m05496|protein Glutamine synthetase, catalytic domain,
putative
Length = 322
Score = 434 bits (1103), Expect = e-121
Identities = 190/249 (76%), Positives = 221/249 (88%)
Frame = +3
Query: 87 LADLVNLNLSDCTDKVIVEYLWVGGSGIDIRSKARTVNGPITDASQLPKWNYDGSSTGQA 266
+ L+N++ + TDK+I EY+WVGG+GID+RSK+RT++ P+ D S+LPKWNYDGSSTGQA
Sbjct: 60 MEQLLNMDTTPFTDKIIAEYIWVGGTGIDLRSKSRTISKPVEDPSELPKWNYDGSSTGQA 119
Query: 267 PGEDSEVILYPQAIFKDPFRRGDNILVMCDCYTPQGVPIPTNKRHNAAKIFNSAKVAAEE 446
PGEDSEVILYPQAIFKDPFR G+NILVMCD YTP G PIPTNKR+ AA++F+ KV ++
Sbjct: 120 PGEDSEVILYPQAIFKDPFRGGNNILVMCDTYTPAGEPIPTNKRNRAAQVFSDPKVVSQV 179
Query: 447 TWYGIEQEYTLLQKDVNWPLGWPIGGYPGPQGPYYCAAGADKAFGRDIVDAHYKACLYAG 626
W+GIEQEYTLLQ+DVNWPLGWP+GGYPGPQGPYYCA G+DK+FGRDI DAHYKACLYAG
Sbjct: 180 PWFGIEQEYTLLQRDVNWPLGWPVGGYPGPQGPYYCAVGSDKSFGRDISDAHYKACLYAG 239
Query: 627 INISGINGEVMPGQWEFQVGPSVGIAASDQLWVARYILERITEVAGVVLSLDPKPIPGDW 806
INISG NGEVMPGQWE+QVGPSVGI A D +W++RYILERITE AGVVL+LDPKPI GDW
Sbjct: 240 INISGTNGEVMPGQWEYQVGPSVGIEAGDHIWISRYILERITEQAGVVLTLDPKPIQGDW 299
Query: 807 NGAGAHTNY 833
NGAG HTNY
Sbjct: 300 NGAGCHTNY 308
9633.m03752|protein retrotransposon protein, putative, unclassified
Length = 796
Score = 68.3 bits (164), Expect = 3e-11
Identities = 89/311 (28%), Positives = 132/311 (41%), Gaps = 8/311 (2%)
Frame = +1
Query: 199 TDPSPTRASCPSGTTTAPAPARLPERTA-KSSSTPR----PFSRTRSGGVTTSLLCATAT 363
T P R P+P LP+RTA +SSST R S+T +G T A
Sbjct: 19 TPPGTPRCPVLEVAEKTPSPNILPKRTATRSSSTTRASRLSVSQTENGHSTAP--TRPAR 76
Query: 364 HHKVCQFPLTRGTMLPRSSTALRLQLRRHGMVLSRSTHSSRRM*TGLLAGQLVATLVLRD 543
+ V + P + T++ S+ L V SR T SRR T + Q +A
Sbjct: 77 SNSVTR-PSIQSTLMSSSNRTAVLN-TSISSVSSRPTTPSRRSSTVVAPKQSIAASRPVP 134
Query: 544 HTTAPPVPTRRSGVTSWTPTTRRASTPGSTSAASTGRSCPASGSSKLGRPSGSPPPTSCG 723
++ PV TR S TPT R STP T + S A+ + + S PTS
Sbjct: 135 ARSSTPVKTRPS-----TPTKTRPSTPVRTRQTANSTSDSAAARTTSAQNSRPSTPTSRS 189
Query: 724 WRATSSRGSQRLPGWCCPWTRSRSRVTGTARARTPTTAPSP*GRPAATR*SRRPSRSLAS 903
RA + S +P P S ++ T+R+ T + + RP ++ S P S A+
Sbjct: 190 -RAMPNSSSGAIPAMSRP---GASTISATSRSNASTISAT--SRPGSSS-SNVPGISRAT 242
Query: 904 ATCSTSPPTARATSAASPATTRPP---TSTPSNGAWRTAARPSAWGATRRRTARATSRTA 1074
+ S++ P+ +S+ S TR P +S P+ G + R S+ + R +
Sbjct: 243 SLSSSTVPSMSRSSSRSSTPTRQPAMRSSAPAVGRSPSVGRSSSISSLTSSINRPAANGG 302
Query: 1075 GRPPTWTPTSSPP*SPRPR 1131
+ SS P SP PR
Sbjct: 303 RNSAPSSAPSSRPSSPGPR 321
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103905384
Number of Sequences: 59712
Number of extensions: 3298884
Number of successful extensions: 27171
Number of sequences better than 1.0e-10: 10
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 27158
Number of HSP's gapped (non-prelim): 11
length of query: 483
length of database: 26,991,925
effective HSP length: 52
effective length of query: 430
effective length of database: 23,886,901
effective search space: 10271367430
effective search space used: 10271367430
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1648 Members:41 3pri:Y 1e-112
AAK18848.1 putative glutamine synthetase [Oryza sativa]
(1421 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m04931|protein putative glutamine synthetase 681 0.0
9630.m04922|protein Glutamine synthetase, catalytic domai... 651 0.0
9631.m01150|protein Glutamine synthetase, catalytic domai... 640 0.0
9632.m05496|protein Glutamine synthetase, catalytic domai... 420 e-117
9629.m05120|protein retrotransposon protein, putative, Ty... 66 3e-12
9631.m04931|protein putative glutamine synthetase
Length = 370
Score = 681 bits (1738), Expect = 0.0
Identities = 317/364 (87%), Positives = 339/364 (93%), Gaps = 6/364 (1%)
Frame = +1
Query: 205 LAMSRLADLLSLDLSGCTGKIIAEYIWVGGTGMDVRSKARTLPGPVDDPSKLPKWNFDGS 384
++ S L DL++LDLS T K+IAEYIWVGGTGMDVRSKARTL GPVDDPSKLPKWNFDGS
Sbjct: 1 MSSSLLTDLVNLDLSESTDKVIAEYIWVGGTGMDVRSKARTLSGPVDDPSKLPKWNFDGS 60
Query: 385 STGQATGDDSEVILRPQAIFRDPFRKGNNILVICDCYAPTGEPIPSNKRYNAARIFGHPD 564
STGQATGDDSEVIL PQAIFRDPFRKG NILV+CDCYAP GEPIP+N RYNAARIF HPD
Sbjct: 61 STGQATGDDSEVILHPQAIFRDPFRKGKNILVMCDCYAPNGEPIPTNNRYNAARIFSHPD 120
Query: 565 VKSEEPWYGIEQEYTLLQKDTNWPIGWPLGGYPGPQGPYYCAAGAEKSYGRDIVDAHYKA 744
VK+EEPWYGIEQEYTLLQK NWP+GWPLGGYPGPQGPYYCAAGA+KSYGRDIVDAHYKA
Sbjct: 121 VKAEEPWYGIEQEYTLLQKHINWPLGWPLGGYPGPQGPYYCAAGADKSYGRDIVDAHYKA 180
Query: 745 CLYAGINIGGINAEVMPGQWEFQVGPSVGISAGDELWAARYILERITEIAGVVVSFDPKP 924
CL+AGINI GINAEVMPGQWEFQ+GP VG+SAGD +W ARYILERITEIAGVVVSFDPKP
Sbjct: 181 CLFAGINISGINAEVMPGQWEFQIGPVVGVSAGDHVWVARYILERITEIAGVVVSFDPKP 240
Query: 925 IPGEWNGAGAHTNYSTKSMRSEGGYEVIKRAIKKLEARHTEHIAAYGEGNERRLTGRHET 1104
IPG+WNGAGAHTNYSTKSMRS GGYEVIK+AIKKL RH EHIAAYG+GNERRLTGRHET
Sbjct: 241 IPGDWNGAGAHTNYSTKSMRSNGGYEVIKKAIKKLGMRHREHIAAYGDGNERRLTGRHET 300
Query: 1105 ADINTFVWGVANRGASVRVGRDTEKEGRGYFEDRRPASNMDPYVVTSMIAETTILWKA-- 1278
ADIN FVWGVANRGASVRVGRDTEK+G+GYFEDRRPASNMDPY+VT+MIAETTILW+
Sbjct: 301 ADINNFVWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYLVTAMIAETTILWEPSH 360
Query: 1279 ----GLSNGK 1296
G SNGK
Sbjct: 361 GHGHGQSNGK 370
9630.m04922|protein Glutamine synthetase, catalytic domain, putative
Length = 356
Score = 651 bits (1662), Expect = 0.0
Identities = 295/355 (83%), Positives = 330/355 (92%)
Frame = +1
Query: 211 MSRLADLLSLDLSGCTGKIIAEYIWVGGTGMDVRSKARTLPGPVDDPSKLPKWNFDGSST 390
M+ L DL++L+LS T KIIAEYIW+GG+GMD+RSKARTL GPV DPSKLPKWN+DGSST
Sbjct: 1 MASLTDLVNLNLSDTTEKIIAEYIWIGGSGMDLRSKARTLSGPVTDPSKLPKWNYDGSST 60
Query: 391 GQATGDDSEVILRPQAIFRDPFRKGNNILVICDCYAPTGEPIPSNKRYNAARIFGHPDVK 570
GQA G+DSEVIL PQAIF+DPFRKGNNILV+CDCY P GEPIP+NKR+NAA+IF P+V
Sbjct: 61 GQAPGEDSEVILYPQAIFKDPFRKGNNILVMCDCYTPAGEPIPTNKRHNAAKIFSSPEVA 120
Query: 571 SEEPWYGIEQEYTLLQKDTNWPIGWPLGGYPGPQGPYYCAAGAEKSYGRDIVDAHYKACL 750
SEEPWYGIEQEYTLLQKD NWP+GWP+GG+PGPQGPYYC GA+KS+GRDIVD+HYKACL
Sbjct: 121 SEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCGIGADKSFGRDIVDSHYKACL 180
Query: 751 YAGINIGGINAEVMPGQWEFQVGPSVGISAGDELWAARYILERITEIAGVVVSFDPKPIP 930
YAGINI GIN EVMPGQWEFQVGPSVGISAGD++W ARYILERITEIAGVVVSFDPKPIP
Sbjct: 181 YAGINISGINGEVMPGQWEFQVGPSVGISAGDQVWVARYILERITEIAGVVVSFDPKPIP 240
Query: 931 GEWNGAGAHTNYSTKSMRSEGGYEVIKRAIKKLEARHTEHIAAYGEGNERRLTGRHETAD 1110
G+WNGAGAHTNYSTKSMR++GGYE+IK AI+KL+ RH EHI+AYGEGNERRLTGRHETAD
Sbjct: 241 GDWNGAGAHTNYSTKSMRNDGGYEIIKSAIEKLKLRHKEHISAYGEGNERRLTGRHETAD 300
Query: 1111 INTFVWGVANRGASVRVGRDTEKEGRGYFEDRRPASNMDPYVVTSMIAETTILWK 1275
INTF WGVANRGASVRVGR+TE+ G+GYFEDRRPASNMDPY+VTSMIAETTI+WK
Sbjct: 301 INTFSWGVANRGASVRVGRETEQNGKGYFEDRRPASNMDPYIVTSMIAETTIIWK 355
9631.m01150|protein Glutamine synthetase, catalytic domain, putative
Length = 357
Score = 640 bits (1633), Expect = 0.0
Identities = 287/355 (80%), Positives = 327/355 (91%)
Frame = +1
Query: 211 MSRLADLLSLDLSGCTGKIIAEYIWVGGTGMDVRSKARTLPGPVDDPSKLPKWNFDGSST 390
M+ L DL++L+LS C+ KIIAEYIWVGG+G+D+RSKART+ GP+ D S+LPKWN+DGSST
Sbjct: 1 MANLTDLVNLNLSDCSDKIIAEYIWVGGSGIDLRSKARTVKGPITDVSQLPKWNYDGSST 60
Query: 391 GQATGDDSEVILRPQAIFRDPFRKGNNILVICDCYAPTGEPIPSNKRYNAARIFGHPDVK 570
GQA G+DSEVIL PQAIF+DPFR+G+NILV+CDCY P GEPIP+NKR++AA+IF HPDV
Sbjct: 61 GQAPGEDSEVILYPQAIFKDPFRRGDNILVMCDCYTPQGEPIPTNKRHSAAKIFSHPDVV 120
Query: 571 SEEPWYGIEQEYTLLQKDTNWPIGWPLGGYPGPQGPYYCAAGAEKSYGRDIVDAHYKACL 750
+E PWYGIEQEYTLLQKD NWP+GWP+GG+PGPQGPYYCAAGAEK++GRDIVDAHYKAC+
Sbjct: 121 AEVPWYGIEQEYTLLQKDVNWPLGWPVGGFPGPQGPYYCAAGAEKAFGRDIVDAHYKACI 180
Query: 751 YAGINIGGINAEVMPGQWEFQVGPSVGISAGDELWAARYILERITEIAGVVVSFDPKPIP 930
YAGINI GIN EVMPGQWEFQVGPSVGI+A D++W ARYILER+TE+AGVV+S DPKPIP
Sbjct: 181 YAGINISGINGEVMPGQWEFQVGPSVGIAAADQVWVARYILERVTEVAGVVLSLDPKPIP 240
Query: 931 GEWNGAGAHTNYSTKSMRSEGGYEVIKRAIKKLEARHTEHIAAYGEGNERRLTGRHETAD 1110
G+WNGAGAHTN+STKSMR GGYEVIK+AI KL RH EHIAAYGEGNERRLTGRHETAD
Sbjct: 241 GDWNGAGAHTNFSTKSMREPGGYEVIKKAIDKLALRHKEHIAAYGEGNERRLTGRHETAD 300
Query: 1111 INTFVWGVANRGASVRVGRDTEKEGRGYFEDRRPASNMDPYVVTSMIAETTILWK 1275
INTF WGVANRGAS+RVGRDTEKEG+GYFEDRRPASNMDPYVVT MIAETT+LWK
Sbjct: 301 INTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTGMIAETTLLWK 355
9632.m05496|protein Glutamine synthetase, catalytic domain,
putative
Length = 322
Score = 420 bits (1068), Expect = e-117
Identities = 185/252 (73%), Positives = 218/252 (86%)
Frame = +1
Query: 211 MSRLADLLSLDLSGCTGKIIAEYIWVGGTGMDVRSKARTLPGPVDDPSKLPKWNFDGSST 390
++R+ LL++D + T KIIAEYIWVGGTG+D+RSK+RT+ PV+DPS+LPKWN+DGSST
Sbjct: 57 VTRMEQLLNMDTTPFTDKIIAEYIWVGGTGIDLRSKSRTISKPVEDPSELPKWNYDGSST 116
Query: 391 GQATGDDSEVILRPQAIFRDPFRKGNNILVICDCYAPTGEPIPSNKRYNAARIFGHPDVK 570
GQA G+DSEVIL PQAIF+DPFR GNNILV+CD Y P GEPIP+NKR AA++F P V
Sbjct: 117 GQAPGEDSEVILYPQAIFKDPFRGGNNILVMCDTYTPAGEPIPTNKRNRAAQVFSDPKVV 176
Query: 571 SEEPWYGIEQEYTLLQKDTNWPIGWPLGGYPGPQGPYYCAAGAEKSYGRDIVDAHYKACL 750
S+ PW+GIEQEYTLLQ+D NWP+GWP+GGYPGPQGPYYCA G++KS+GRDI DAHYKACL
Sbjct: 177 SQVPWFGIEQEYTLLQRDVNWPLGWPVGGYPGPQGPYYCAVGSDKSFGRDISDAHYKACL 236
Query: 751 YAGINIGGINAEVMPGQWEFQVGPSVGISAGDELWAARYILERITEIAGVVVSFDPKPIP 930
YAGINI G N EVMPGQWE+QVGPSVGI AGD +W +RYILERITE AGVV++ DPKPI
Sbjct: 237 YAGINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWISRYILERITEQAGVVLTLDPKPIQ 296
Query: 931 GEWNGAGAHTNY 966
G+WNGAG HTNY
Sbjct: 297 GDWNGAGCHTNY 308
9629.m05120|protein retrotransposon protein, putative, Ty3-gypsy
sub-class
Length = 662
Score = 66.0 bits (158), Expect(2) = 1e-11
Identities = 103/356 (28%), Positives = 132/356 (36%), Gaps = 10/356 (2%)
Frame = +2
Query: 221 SPTFSASTCPAAPAR-SSPSTYGSAAPGWTSGAKPGRFPDPWTTPASFQSGISTAPAPAK 397
SP+ C ++P +P + S T G G P P TP S S S
Sbjct: 112 SPSTPGGGCSSSPTPCDAPPSPSSDTSPTTPGGGGGYSPTPSDTPPSPSSDTSPTTPGGG 171
Query: 398 PRATTAKSSSDPKPSSGTR-SGKGTTSWSSVTAMRLPESRFRATSGTTRRGYSAILMSSL 574
T S + P PSS T + G + T P S TS TT G
Sbjct: 172 GGYTPTPSDAPPSPSSDTSPTTPGGGGGYTPTPSDAPPSPSSDTSPTTPGG--------- 222
Query: 575 KNHGMGLSRSTPFSRRTPTGPLAGH*GVTLALRGLTTAPRVRRNLTGATSSTPTTRPAST 754
G G TP TP P +G T P G TPT P+ T
Sbjct: 223 ---GGGY---TPTPSDTPPSPSSG---------SSPTTP------GGGGGYTPT--PSDT 259
Query: 755 PASTSAASMQKSCQGSGSSKSALPSASPPATSSGRLATFSRGSLRSPASSSPSTPNRSRE 934
P S S+ S + + G + P +PPA SSG T GS P S P
Sbjct: 260 PPSPSSGSSRTT---PGGCSTPTPCGTPPAPSSGTSPTTPGGSYYPPTPSIGDVP----- 311
Query: 935 SGTVPVPTQTTAPSR*GARA-GTR*SRGRSRSSRRGTRST*PPTG---KATSAG----SP 1090
P P+ T+P+ G + T S SS GT T P G S G SP
Sbjct: 312 ----PSPSSDTSPTTPGGGSPSTPCDTPPSPSS--GTSPTTPGGGYYPPTPSVGDVPPSP 365
Query: 1091 AATRPPTSTPSYGAWQTAARRCGWGATPRRKAGATSRTGGRRPTWIPTSSPP*SPRPPSS 1270
A+ P STP G + + + C +P T+ GG P+ P ++P P P S
Sbjct: 366 ASGTSP-STPGSGGY-SPSTPCSAPPSPSSGTSPTTPGGGYSPS-TPCNAP---PSPSSD 419
Query: 1271 GRPVSP 1288
P +P
Sbjct: 420 TSPTTP 425
Score = 65.6 bits (157), Expect(2) = 3e-12
Identities = 105/359 (29%), Positives = 135/359 (37%), Gaps = 26/359 (7%)
Frame = +2
Query: 206 SPCLGSPTFSASTCPAAPA---------RSSPSTYGSAAPGWTSGAKPGRFPDPWTTPAS 358
+P P+ S+ T P P +P + S T G G P P TP S
Sbjct: 177 TPSDAPPSPSSDTSPTTPGGGGGYTPTPSDAPPSPSSDTSPTTPGGGGGYTPTPSDTPPS 236
Query: 359 FQSGISTAPAPAKPRATTAKSSSDPKPSSGTRSGKGTTSWSSVTAMRLPESRFRATSGTT 538
SG S T S + P PSSG+ S S+ T P + TS TT
Sbjct: 237 PSSGSSPTTPGGGGGYTPTPSDTPPSPSSGS-SRTTPGGCSTPTPCGTPPAPSSGTSPTT 295
Query: 539 RRGYSAILMSSLKNHGMGLSRSTPFSRRTPTGPLAGH*GV---TLALRGLTTAPRVRRNL 709
G S+ G +P S +PT P G T T+P
Sbjct: 296 PGGSYYPPTPSI-----GDVPPSPSSDTSPTTPGGGSPSTPCDTPPSPSSGTSP----TT 346
Query: 710 TGATSSTPTTRPASTPASTSAASMQKSCQGSGSSKSALPSASPPATSSGRLATFSRGSL- 886
G PT P S A+ S GSG + P ++PP+ SSG T G
Sbjct: 347 PGGGYYPPTPSVGDVPPS-PASGTSPSTPGSGGYSPSTPCSAPPSPSSGTSPTTPGGGYS 405
Query: 887 ------RSPASSSPSTPNRSRESGTVPVPTQTTAPSR*GARAGTR*SRGRSRSSRRGTRS 1048
P+ SS ++P P PT P +GT S S T
Sbjct: 406 PSTPCNAPPSPSSDTSPTTPGGGNYPPAPTIGNVPP--SPSSGTSPSTPGGGCSSSPTPC 463
Query: 1049 T*PPTGKA-TSAGSPAATRPPTSTPSYGAWQTAARRCGWGATPRRKAGATSRTGGRRPT- 1222
PP+ + TS +P P TPS G + G G P + TGG PT
Sbjct: 464 DAPPSPSSDTSPTTPGGGYYP-PTPSIGT-SPSTPGTGGGYYP-----PSPSTGGYTPTP 516
Query: 1223 WIPTSSP-----P*SPRPPSSGRPV 1282
+P S+P P P PPSS P+
Sbjct: 517 DVPISTPSSPYSPLVPTPPSSTTPM 541
Score = 26.2 bits (56), Expect(2) = 3e-12
Identities = 14/41 (34%), Positives = 16/41 (38%)
Frame = +1
Query: 10 TPLLLPPHFQES*PPFASHKNTSPSSSACSPPPSPAQAPSP 132
TP PP P S S + C PPSP+ SP
Sbjct: 99 TPSDTPPSPSSDTSPSTPGGGCSSSPTPCDAPPSPSSDTSP 139
Score = 23.9 bits (50), Expect(2) = 1e-11
Identities = 12/28 (42%), Positives = 16/28 (56%), Gaps = 2/28 (7%)
Frame = +1
Query: 52 PFASHKNTSPSSSACSPP--PSPAQAPSPG 135
P H ++SPS S +PP P+P Q G
Sbjct: 46 PTGQHHSSSPSHSHKAPPCAPTPPQGGGGG 75
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111742095
Number of Sequences: 59712
Number of extensions: 4193412
Number of successful extensions: 114301
Number of sequences better than 1.0e-10: 10
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 114229
Number of HSP's gapped (non-prelim): 41
length of query: 473
length of database: 26,991,925
effective HSP length: 52
effective length of query: 421
effective length of database: 23,886,901
effective search space: 10056385321
effective search space used: 10056385321
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1650 Members:187 3pri:Y 1e-131
CAC85913.1 phosphoglucomutase [Triticum aestivum]
(2351 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m04930|protein phosphoglucomutase 1091 0.0
9638.m00992|protein putative phosphoglucomutase 699 0.0
9631.m04930|protein phosphoglucomutase
Length = 582
Score = 1091 bits (2790), Expect = 0.0
Identities = 530/581 (91%), Positives = 561/581 (96%)
Frame = +1
Query: 223 MVFSVTKRDTTPYEGQKPGTSGLRKKVTVFQQPHYLANFVQSTFNALPADQVKGATIVVS 402
++FSVTK+ TTP++GQKPGTSGLRKKVTVFQQPHYL NFVQSTFNALPAD+VKGATIVVS
Sbjct: 2 VLFSVTKKATTPFDGQKPGTSGLRKKVTVFQQPHYLQNFVQSTFNALPADKVKGATIVVS 61
Query: 403 GDGRYFSKDAVQIIAKMAAANGVRRVWVGQDSLLSTPAVSAIIRERISADGAKATGAFIL 582
GDGRYFSKDAVQII KMAAANGVRRVWVGQ+SL+STPAVSA+IRER+ ADG+KATGAFIL
Sbjct: 62 GDGRYFSKDAVQIITKMAAANGVRRVWVGQNSLMSTPAVSAVIRERVGADGSKATGAFIL 121
Query: 583 TASHNPGGPTEDFGIKYNMENGGPAPESVTDKIFSNTKTITEYLIAEDLPDVDISVTGVT 762
TASHNPGGPTEDFGIKYNMENGGPAPESVTDKIFSNT TITEYLIAEDLPDVDISV GVT
Sbjct: 122 TASHNPGGPTEDFGIKYNMENGGPAPESVTDKIFSNTTTITEYLIAEDLPDVDISVVGVT 181
Query: 763 SFTGPEGPFDVDVFDSATDYIKLMKTIFDFESIKKLLASPKFSFCFDGLHGVAGAYAKRI 942
+F+GPEGPFDVDVFDS DYIKLMKTIFDFESIKKLLASPKF+FC+D LHGVAG YA RI
Sbjct: 182 TFSGPEGPFDVDVFDSTIDYIKLMKTIFDFESIKKLLASPKFTFCYDALHGVAGTYATRI 241
Query: 943 FVDELGASESSLLNCVPKEDFGGGHPDPNLTYAKELVDRMGLGKTSNGEPPEFGAAADGD 1122
FV+ELGA+ESSLLNCVPKEDFGGGHPDPNLTYAKELVDRMGLGK+SN EPPEFGAAADGD
Sbjct: 242 FVEELGAAESSLLNCVPKEDFGGGHPDPNLTYAKELVDRMGLGKSSNAEPPEFGAAADGD 301
Query: 1123 ADRNMVLGKRFFVTPSDSVAIIAANAVQSIPYFASGLKGVARSMPTSAALDVVAKNLNLK 1302
ADRNM+LGKRFFVTPSDSVAIIAANAVQSIPYF+SGLKGVARSMPTSAALDVVAKNLNLK
Sbjct: 302 ADRNMILGKRFFVTPSDSVAIIAANAVQSIPYFSSGLKGVARSMPTSAALDVVAKNLNLK 361
Query: 1303 FFEVPTGWKFFGNLMDAGMCSVCGEESFGTGSDHIREKDGIWAVLAWLSILAYKNKDNLG 1482
FFEVPTGWKFFGNLMDAGMCS+CGEESFGTGSDHIREKDGIWAVLAWLSILA+KNKDNLG
Sbjct: 362 FFEVPTGWKFFGNLMDAGMCSICGEESFGTGSDHIREKDGIWAVLAWLSILAFKNKDNLG 421
Query: 1483 GDKLVTVEDIVLQHWGTYGRHYYTRYDYENVDAEAAKELMANLVKMQASLPDVNKSIKEI 1662
GDKLVTVEDIV QHWGTYGRHYYTRYDYENVDA AAKELMANLV MQ+SL DVNK IKEI
Sbjct: 422 GDKLVTVEDIVRQHWGTYGRHYYTRYDYENVDAGAAKELMANLVSMQSSLSDVNKLIKEI 481
Query: 1663 QPAVADVVSADEFEYKDPVDGSVSKHQGIRYLFGDGSRLVFRLSGTGSVGATIRIYIEQY 1842
+ V+DVV+ADEFEYKDPVDGSVSKHQG+RYLFGDGSRLVFRLSGTGSVGATIR+YIEQY
Sbjct: 482 RSDVSDVVAADEFEYKDPVDGSVSKHQGVRYLFGDGSRLVFRLSGTGSVGATIRVYIEQY 541
Query: 1843 EKDSSKTGRESSDALSPLVDVALKLSKIQEYTGRSAPTVIT 1965
EKDSSKTGR+S DAL+PLVDVALKLSK+QEYTGRSAPTVIT
Sbjct: 542 EKDSSKTGRDSQDALAPLVDVALKLSKMQEYTGRSAPTVIT 582
9638.m00992|protein putative phosphoglucomutase
Length = 609
Score = 699 bits (1784), Expect = 0.0
Identities = 364/615 (59%), Positives = 455/615 (73%), Gaps = 17/615 (2%)
Frame = +1
Query: 121 HRGHLHLASSSSSAHRPRPLARAQRPG------------AVV---TAADMVFSVTKRDTT 255
H LH S++A RP PLA RPG AVV ++A + T
Sbjct: 4 HALRLHPLLFSAAAARPAPLAA--RPGGGARRVHRRHSLAVVRCSSSAAQALKIKSIPTK 61
Query: 256 PYEGQKPGTSGLRKKVTVFQQPHYLANFVQSTFNALPADQVKGATIVVSGDGRYFSKDAV 435
P EGQK GTSGLRKKV VFQQ +YLAN++Q+ FN+LP + G T+V+ GDGRYF+KDA
Sbjct: 62 PVEGQKTGTSGLRKKVKVFQQENYLANWIQALFNSLPPEDYVGGTLVLGGDGRYFNKDAA 121
Query: 436 QIIAKMAAANGVRRVWVGQDSLLSTPAVSAIIRERISADGAKATGAFILTASHNPGGPTE 615
QII K+AA NGV ++ VG++ LLSTPAVSA+IR+R +A G FI++ASHNPGGP
Sbjct: 122 QIITKIAAGNGVGKILVGRNGLLSTPAVSAVIRKR------QANGGFIMSASHNPGGPDN 175
Query: 616 DFGIKYNMENGGPAPESVTDKIFSNTKTITEYLIAEDLPDVDISVTGVTSFTGPEGPFDV 795
D+GIK+N +G PAPE++TD+I+ NT +I+E A D+PDVD+S GV S+ G F V
Sbjct: 176 DWGIKFNYSSGQPAPETITDQIYGNTLSISEIKTA-DIPDVDLSSLGVVSY----GDFTV 230
Query: 796 DVFDSATDYIKLMKTIFDFESIKKLLASPKFSFCFDGLHGVAGAYAKRIFVDELGASESS 975
+V D DY++LM+ +FDF+ IK LL+ P F F FD +H V GAYA IFV++LGA
Sbjct: 231 EVIDPVLDYLELMENVFDFQLIKGLLSRPDFRFVFDAMHAVTGAYADPIFVEKLGADPDY 290
Query: 976 LLNCVPKEDFGGGHPDPNLTYAKELVDRM-GLGKTSNGEPPEFGAAADGDADRNMVLGKR 1152
+LN VP EDFG GHPDPNLTYAKELV M G G P+FGAA+DGD DRNM+LG+R
Sbjct: 291 ILNGVPLEDFGNGHPDPNLTYAKELVFTMFGSGA------PDFGAASDGDGDRNMILGRR 344
Query: 1153 FFVTPSDSVAIIAANAVQSIPYFASGLKGVARSMPTSAALDVVAKNLNLKFFEVPTGWKF 1332
FFVTPSDSVAIIAANA +IPYF SG KG+ARSMPTS ALD VA LN+ FFEVPTGWKF
Sbjct: 345 FFVTPSDSVAIIAANAQAAIPYFQSGPKGLARSMPTSGALDRVADKLNVPFFEVPTGWKF 404
Query: 1333 FGNLMDAGMCSVCGEESFGTGSDHIREKDGIWAVLAWLSILAYKNKDNLGGDKLVTVEDI 1512
FGNLMDAG S+CGEESFGTGSDHIREKDGIWAVLAWLSILA++NKD G++LV+VED+
Sbjct: 405 FGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSILAHRNKDKKAGERLVSVEDV 464
Query: 1513 VLQHWGTYGRHYYTRYDYENVDAEAAKELMANLVKMQA-SLPDVNKSIKEIQPAVADVVS 1689
+HW TYGR++++RYDYE ++E+A ++M +L + A S P +Q
Sbjct: 465 AREHWATYGRNFFSRYDYEECESESANKMMEHLRDVIAKSKPGEKYGNYTLQ-------F 517
Query: 1690 ADEFEYKDPVDGSVSKHQGIRYLFGDGSRLVFRLSGTGSVGATIRIYIEQYEKDSSKTGR 1869
AD+F Y DPVDGS QG+R++F DGSR++FRLSGTGS GATIRIYIEQ+E D+SK
Sbjct: 518 ADDFSYTDPVDGSTVSKQGLRFVFTDGSRIIFRLSGTGSAGATIRIYIEQFESDASKHDL 577
Query: 1870 ESSDALSPLVDVALKLSKIQEYTGRSAPTVIT 1965
++ AL PL+D+AL +SK++++TGR PTVIT
Sbjct: 578 DAQIALKPLIDLALSVSKLKDFTGRDKPTVIT 609
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150428943
Number of Sequences: 59712
Number of extensions: 4750290
Number of successful extensions: 67243
Number of sequences better than 1.0e-10: 4
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67235
Number of HSP's gapped (non-prelim): 2
length of query: 783
length of database: 26,991,925
effective HSP length: 53
effective length of query: 730
effective length of database: 23,827,189
effective search space: 17393847970
effective search space used: 17393847970
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 162 (67.5 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1669 Members:62 3pri:Y 1e-103
AAD26256.1 ribosomal protein S7 [Secale cereale]
(824 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m01832|protein Ribosomal protein S7e 356 2e-98
9631.m01833|protein Ribosomal protein S7e 353 2e-97
9633.m02550|protein Ribosomal protein S7e 352 5e-97
9630.m02103|protein hypothetical protein 111 2e-24
9631.m01832|protein Ribosomal protein S7e
Length = 192
Score = 356 bits (905), Expect = 2e-98
Identities = 172/192 (89%), Positives = 187/192 (96%)
Frame = +3
Query: 48 MYTARKKIQKDKGLEPSEFEDSVAQAFFDLENGNQELKSDVKDLYINAAFQMDVAGNRKA 227
MYTARKKIQK+KGLEPSEFEDSVAQAFFDLENGNQELKS++KDLYIN A QMD+AGNRKA
Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 228 VVIHVPYRLRKSFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVVRPRTRTLT 407
VVIHVPYRLRK+F+KIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAV RPRTRTLT
Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVQRPRTRTLT 120
Query: 408 AVHDGLLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLDTFTSVYRRLCGK 587
AVHDG+LEDVVYPAEIVGKR+RYRLDG+K+IKIFLDPKERNNTEYKL+TF++VYRRLCGK
Sbjct: 121 AVHDGILEDVVYPAEIVGKRIRYRLDGAKVIKIFLDPKERNNTEYKLETFSAVYRRLCGK 180
Query: 588 DVVYEYPVAETA 623
DV +EYP+ ETA
Sbjct: 181 DVAFEYPMTETA 192
9631.m01833|protein Ribosomal protein S7e
Length = 192
Score = 353 bits (896), Expect = 2e-97
Identities = 171/192 (89%), Positives = 186/192 (96%)
Frame = +3
Query: 48 MYTARKKIQKDKGLEPSEFEDSVAQAFFDLENGNQELKSDVKDLYINAAFQMDVAGNRKA 227
MYTARKKIQK+KGLEPSEFEDSVAQAFFDLENGNQELKS++KDLYIN A QMD+AGNRKA
Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 228 VVIHVPYRLRKSFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVVRPRTRTLT 407
VVIHVPYRLRK+F+KIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAV RPRTRTLT
Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVQRPRTRTLT 120
Query: 408 AVHDGLLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLDTFTSVYRRLCGK 587
AVHD +LEDVVYPAEIVGKR+RYRLDG+K+IKIFLDPKERNNTEYKL+TF++VYRRLCGK
Sbjct: 121 AVHDCILEDVVYPAEIVGKRIRYRLDGAKVIKIFLDPKERNNTEYKLETFSAVYRRLCGK 180
Query: 588 DVVYEYPVAETA 623
DV +EYP+ ETA
Sbjct: 181 DVAFEYPMTETA 192
9633.m02550|protein Ribosomal protein S7e
Length = 192
Score = 352 bits (893), Expect = 5e-97
Identities = 169/192 (88%), Positives = 186/192 (96%)
Frame = +3
Query: 48 MYTARKKIQKDKGLEPSEFEDSVAQAFFDLENGNQELKSDVKDLYINAAFQMDVAGNRKA 227
MYTAR+KIQKDKGLEP+EFED+VAQAFFDLENGNQELKSD+KDLYIN A QMD+ GNRKA
Sbjct: 1 MYTARRKIQKDKGLEPTEFEDTVAQAFFDLENGNQELKSDLKDLYINGAVQMDLPGNRKA 60
Query: 228 VVIHVPYRLRKSFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVVRPRTRTLT 407
V+I+VPYRLRK+++KIHVRLVRELEKKFSGKDVV+VATRRIVRPPKKGSAVVRPRTRTLT
Sbjct: 61 VIIYVPYRLRKAYKKIHVRLVRELEKKFSGKDVVLVATRRIVRPPKKGSAVVRPRTRTLT 120
Query: 408 AVHDGLLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLDTFTSVYRRLCGK 587
AVHDG+LEDVVYPAEIVGKRVRY LDG KI+KIFLDPKERNNTEYKLDTF+SVYRRLCGK
Sbjct: 121 AVHDGILEDVVYPAEIVGKRVRYHLDGRKIMKIFLDPKERNNTEYKLDTFSSVYRRLCGK 180
Query: 588 DVVYEYPVAETA 623
DVV++YP+ ETA
Sbjct: 181 DVVFDYPMTETA 192
9630.m02103|protein hypothetical protein
Length = 100
Score = 111 bits (275), Expect = 2e-24
Identities = 57/78 (73%), Positives = 63/78 (80%)
Frame = +3
Query: 228 VVIHVPYRLRKSFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVVRPRTRTLT 407
VVIHV Y L K+F+KIHVRLV+ELEKKFSGKDVV ATRRIVRP KGSAV PRTRTL
Sbjct: 17 VVIHVLYHLCKAFKKIHVRLVKELEKKFSGKDVVFDATRRIVRPLNKGSAVHHPRTRTLI 76
Query: 408 AVHDGLLEDVVYPAEIVG 461
VHDG+LEDVV ++G
Sbjct: 77 TVHDGILEDVVSQLRLLG 94
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49058288
Number of Sequences: 59712
Number of extensions: 1298011
Number of successful extensions: 9076
Number of sequences better than 1.0e-10: 8
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9071
Number of HSP's gapped (non-prelim): 5
length of query: 274
length of database: 26,991,925
effective HSP length: 50
effective length of query: 224
effective length of database: 24,006,325
effective search space: 5377416800
effective search space used: 5377416800
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 157 (65.6 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1672 Members:400 3pri:Y 1e-113
BAC06929.1 putative alanine transaminase [Oryza sativa
(japonica cultivar-group)]
(2035 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9635.m00079|protein hypothetical protein 750 0.0
9638.m02118|protein alanine aminotransferase 509 e-144
9635.m04267|protein aminotransferase, classes I and II, p... 483 e-136
9631.m00798|protein aminotransferase, classes I and II, p... 453 e-127
9637.m02299|protein aminotransferase, classes I and II, p... 437 e-122
9638.m02119|protein aminotransferase, classes I and II, p... 411 e-114
9630.m01906|protein tyrosine aminotransferase-like protein 92 4e-18
9630.m01909|protein tyrosine aminotransferase, putative 91 7e-18
9634.m00311|protein aminotransferase, classes I and II, p... 88 5e-17
9630.m01948|protein tyrosine/nicotianamine aminotransferases 87 8e-17
9629.m00919|protein aminotransferase, classes I and II, p... 76 2e-13
9633.m02295|protein aminotransferase, classes I and II, p... 76 3e-13
9633.m00941|protein aminotransferase, classes I and II, p... 75 6e-13
9631.m05057|protein 1-aminocyclopropane-1-carboxylate syn... 71 5e-12
9632.m04738|protein 1-aminocyclopropane-1-carboxylate syn... 70 2e-11
9635.m00079|protein hypothetical protein
Length = 398
Score = 750 bits (1916), Expect = 0.0
Identities = 362/392 (92%), Positives = 379/392 (96%)
Frame = +3
Query: 315 GEGEMMGRKALDYEELNENVKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALGQKP 494
G G GRK LDYEELNENVKKVQYAVRGELYLRASELQKEGK+IIFTNVGNPHALGQKP
Sbjct: 3 GGGGGGGRKPLDYEELNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKP 62
Query: 495 LTFPRQVVALCQAPFLLDDPNVGLIFPADAIARAKHYLSLAPGGLGAYSDSRGIPGVRKE 674
LTFPRQVVALCQAPFLLDDPNVGLIFPADAIARAKHYL++APGGLGAYSDSRGIPG+RKE
Sbjct: 63 LTFPRQVVALCQAPFLLDDPNVGLIFPADAIARAKHYLAMAPGGLGAYSDSRGIPGIRKE 122
Query: 675 VAEFIQRRDGYPSDPELIYLTDGASKGVMQMLNAIIRNERDGILVPVPQYPLYSAAISLF 854
VAEFI+RRDGYPSDPELIYLTDGASKGVMQMLN IIRNERDGILVPVPQYPLYSAAISLF
Sbjct: 123 VAEFIERRDGYPSDPELIYLTDGASKGVMQMLNTIIRNERDGILVPVPQYPLYSAAISLF 182
Query: 855 GGSLVPYYLEEEANWGLDLVSTRQSVAEARSKGITVRAMVIINPGNPTGQCLSEANIREL 1034
GGSLVPYYLEEEANWGLD V+ RQ+VA ARSKGITVRAMVIINPGNPTGQCLSE NI+EL
Sbjct: 183 GGSLVPYYLEEEANWGLDFVNLRQTVASARSKGITVRAMVIINPGNPTGQCLSEGNIKEL 242
Query: 1035 LNFCYQEKLVLLADEVYQQNVYQDERPFISARKVMFDMGPPVSREVQLISFHTVSKGYWG 1214
L FC+ E LVLLADEVYQQN+YQDERPFISARKV+FDMGPP+SREVQL+SFHTVSKGYWG
Sbjct: 243 LKFCFHENLVLLADEVYQQNIYQDERPFISARKVLFDMGPPMSREVQLVSFHTVSKGYWG 302
Query: 1215 ECGQRGGYFEMTNIPPKTVDEIYKVASIALSPNVPGQIFMGLMVNPPKPGDISYLKYSAE 1394
ECGQRGGYFEMTN+PPKTVDEIYKVASIALSPNVPGQIFMGLMVNPPKPGDISYLK+SAE
Sbjct: 303 ECGQRGGYFEMTNLPPKTVDEIYKVASIALSPNVPGQIFMGLMVNPPKPGDISYLKFSAE 362
Query: 1395 SKSILESLRRRAQIMTDGFNSCRNVVCNFTEG 1490
SKSILESLRRRA++MTDGFNSCRNVVCNFTEG
Sbjct: 363 SKSILESLRRRARLMTDGFNSCRNVVCNFTEG 394
9638.m02118|protein alanine aminotransferase
Length = 483
Score = 509 bits (1297), Expect = e-144
Identities = 252/474 (53%), Positives = 335/474 (70%), Gaps = 10/474 (2%)
Frame = +3
Query: 330 MGRKALDYEELNENVKKVQYAVRGELYLRASELQKEGK---------RIIFTNVGNPHAL 482
M ++ + LN V +YAVRGE+ + A LQ++ + I++ N+GNP +L
Sbjct: 1 MAAPSVAVDNLNPKVLNCEYAVRGEIVIHAQRLQQQLQTQPGSLPFDEILYCNIGNPQSL 60
Query: 483 GQKPLTFPRQVVALCQAPFLLDDPNVGLIFPADAIARAKHYLSLAPG-GLGAYSDSRGIP 659
GQKP+TF R+V+ALC P LL+ +F ADAI+RA L+ PG GAYS S+GI
Sbjct: 61 GQKPVTFFREVIALCDHPCLLEKEETKSLFSADAISRATTILASIPGRATGAYSHSQGIK 120
Query: 660 GVRKEVAEFIQRRDGYPSDPELIYLTDGASKGVMQMLNAIIRNERDGILVPVPQYPLYSA 839
G+R +A I RDGYP++ + I+LTDGAS GV M+ +IRNE+DGIL P+PQYPLYSA
Sbjct: 121 GLRDAIAAGIASRDGYPANADDIFLTDGASPGVHMMMQLLIRNEKDGILCPIPQYPLYSA 180
Query: 840 AISLFGGSLVPYYLEEEANWGLDLVSTRQSVAEARSKGITVRAMVIINPGNPTGQCLSEA 1019
+I+L GG+LVPYYL E WGL++ ++ + ++R KGI VRA+V+INPGNPTGQ L+E
Sbjct: 181 SIALHGGALVPYYLNESTGWGLEISDLKKQLEDSRLKGIDVRALVVINPGNPTGQVLAEE 240
Query: 1020 NIRELLNFCYQEKLVLLADEVYQQNVYQDERPFISARKVMFDMGPPVSREVQLISFHTVS 1199
N R+++ FC E LVLLADEVYQ+N+Y D + F S +K+ MG ++ L+SF +VS
Sbjct: 241 NQRDIVKFCKNEGLVLLADEVYQENIYVDNKKFNSFKKIARSMGYNED-DLPLVSFQSVS 299
Query: 1200 KGYWGECGQRGGYFEMTNIPPKTVDEIYKVASIALSPNVPGQIFMGLMVNPPKPGDISYL 1379
KGY+GECG+RGGY E+T ++IYKVAS+ L N+ GQI L++NPPK GD SY
Sbjct: 300 KGYYGECGKRGGYMEITGFSAPVREQIYKVASVNLCSNITGQILASLVMNPPKAGDASYA 359
Query: 1380 KYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGK 1559
Y AE IL+SL RRA+ + + FNS + CN TEGAMY FPQ+ LPQ+A+D AK+A K
Sbjct: 360 SYKAEKDGILQSLARRAKALENAFNSLEGITCNKTEGAMYLFPQLSLPQKAIDAAKAANK 419
Query: 1560 EPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFMD 1739
PD +Y L+LLEATGI VPGSGFGQ G +H+R TILP EE +PAI+S FK F++ FM
Sbjct: 420 APDAFYALRLLEATGIVVVPGSGFGQVPGTWHIRCTILPQEEKIPAIISRFKAFHEGFMA 479
Query: 1740 QYQD 1751
Y+D
Sbjct: 480 AYRD 483
9635.m04267|protein aminotransferase, classes I and II, putative
Length = 511
Score = 483 bits (1229), Expect = e-136
Identities = 244/473 (51%), Positives = 333/473 (69%), Gaps = 25/473 (5%)
Frame = +3
Query: 333 GRKALDYEELNENVKKVQYAVRGELYLRASE---------------LQKEGKR------- 446
G + + +N V K +YAVRGE+ A + LQ+E ++
Sbjct: 15 GAAPVSLDTINPKVLKCEYAVRGEIVTHAQDFLRNLDYDLHFILQNLQQELQKNPDSLPF 74
Query: 447 --IIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLIFPADAIARAKHYLSLAP 620
I++ N+GNP +LGQ+P+TF R+V++LC P LLD ++ +DAI RA L P
Sbjct: 75 DEILYCNIGNPQSLGQQPVTFFREVLSLCDHPALLDKSETHALYSSDAIERAWQILDKIP 134
Query: 621 G-GLGAYSDSRGIPGVRKEVAEFIQRRDGYPSDPELIYLTDGASKGVMQMLNAIIRNERD 797
G GAYS S+GI G+R E+A I RDG+ + + I+LTDGAS V M+ +IR+E D
Sbjct: 135 GRATGAYSHSQGIKGLRDEIAAGIAARDGFHASGDNIFLTDGASPAVHMMMQLLIRSEND 194
Query: 798 GILVPVPQYPLYSAAISLFGGSLVPYYLEEEANWGLDLVSTRQSVAEARSKGITVRAMVI 977
GIL P+PQYPLYSA+I+L GGSLVPY+L+EE WGL++ ++ + EA+SKGITVRA+V+
Sbjct: 195 GILCPIPQYPLYSASIALHGGSLVPYFLDEETGWGLEVDELKKQLEEAQSKGITVRALVV 254
Query: 978 INPGNPTGQCLSEANIRELLNFCYQEKLVLLADEVYQQNVYQDERPFISARKVMFDMGPP 1157
INPGNPTGQ L+E N ++++ FC E LVLLADEVYQ+N+Y +++ F S +K+ MG
Sbjct: 255 INPGNPTGQVLAEENQKKIVEFCKNEGLVLLADEVYQENIYVEDKKFHSFKKIARSMGY- 313
Query: 1158 VSREVQLISFHTVSKGYWGECGQRGGYFEMTNIPPKTVDEIYKVASIALSPNVPGQIFMG 1337
++ L+SF +VSKGY+GECG+RGGY E+T ++IYKVAS+ L NV GQI
Sbjct: 314 TDDDLPLVSFQSVSKGYYGECGKRGGYMEVTGFSADVREQIYKVASVNLCSNVSGQILAS 373
Query: 1338 LMVNPPKPGDISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIR 1517
L++NPPK GD SY + E IL SL RRA+ + + FNS + CN EGAMY FP+I
Sbjct: 374 LIMNPPKAGDESYESFMVEKDGILSSLARRAKALEEAFNSLEGITCNKAEGAMYLFPRIY 433
Query: 1518 LPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPA 1697
LPQ+A+ A++AG PD YY +LLEATGI VPGSGFGQ G +H R TILP E+ +PA
Sbjct: 434 LPQKAIGAAQAAGTAPDAYYARRLLEATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPA 493
Query: 1698 IMSSFKKFNDSFMDQYQD 1751
I+S FK+F++ FMD+++D
Sbjct: 494 IISKFKEFHEKFMDEFRD 511
9631.m00798|protein aminotransferase, classes I and II, putative
Length = 496
Score = 453 bits (1152), Expect = e-127
Identities = 223/428 (52%), Positives = 304/428 (70%), Gaps = 10/428 (2%)
Frame = +3
Query: 354 EELNENVKKVQYAVRGELYLRASELQKEGK---------RIIFTNVGNPHALGQKPLTFP 506
E +N V + +YAVRGE+ + A LQ++ + I++ N+GNP +LGQKP+TF
Sbjct: 8 ENINPKVLRCEYAVRGEVAIHAQHLQQQLQTQPGSLPFDEIVYCNIGNPQSLGQKPITFF 67
Query: 507 RQVVALCQAPFLLDDPNVGLIFPADAIARAKHYLSLAPG-GLGAYSDSRGIPGVRKEVAE 683
R+V+ALC P LL+ + +F DAIARAK LS+ PG GAYS S+GI G+R E+A
Sbjct: 68 REVLALCNHPNLLEREEIKSLFSTDAIARAKKILSMIPGRATGAYSHSQGIKGLRDEIAA 127
Query: 684 FIQRRDGYPSDPELIYLTDGASKGVMQMLNAIIRNERDGILVPVPQYPLYSAAISLFGGS 863
I RDG+P++ + I+LT+GAS GV M+ +IRN RDGI+ P+PQY LYSA+++L GG+
Sbjct: 128 GIASRDGFPANADDIFLTNGASPGVHMMMQLLIRNNRDGIMCPIPQYSLYSASLALHGGA 187
Query: 864 LVPYYLEEEANWGLDLVSTRQSVAEARSKGITVRAMVIINPGNPTGQCLSEANIRELLNF 1043
LVPYYL+E + WGL++ + + +ARSKGITVRA+V+INPGNPTGQ L E EL+ F
Sbjct: 188 LVPYYLDESSGWGLEVSKLKNQLEDARSKGITVRALVVINPGNPTGQILDEQQQYELVKF 247
Query: 1044 CYQEKLVLLADEVYQQNVYQDERPFISARKVMFDMGPPVSREVQLISFHTVSKGYWGECG 1223
C E+LVLLADEVYQ+N+Y + S +K+ MG ++QL+S H+VSKGY+GECG
Sbjct: 248 CKDEELVLLADEVYQENIYVTNKKINSFKKIARSMGYN-GDDLQLVSLHSVSKGYYGECG 306
Query: 1224 QRGGYFEMTNIPPKTVDEIYKVASIALSPNVPGQIFMGLMVNPPKPGDISYLKYSAESKS 1403
+RGGY E+T +++YK+AS+ L N+ GQI L+++PPK GD SY Y E +
Sbjct: 307 KRGGYMEVTGFSTPVREQLYKIASVNLCSNITGQILASLIMDPPKAGDASYDLYEEEKDN 366
Query: 1404 ILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCL 1583
IL+SL RRA+ M FNS + CN TEGAMY FP+I LPQ+A++ A++ K PDV+Y L
Sbjct: 367 ILKSLSRRAKAMESAFNSIDGITCNKTEGAMYLFPRIYLPQKAIEAARAVNKAPDVFYAL 426
Query: 1584 KLLEATGISTVPGSGFGQ 1637
+LL+ TGI PGSGFGQ
Sbjct: 427 RLLDTTGIVVTPGSGFGQ 444
9637.m02299|protein aminotransferase, classes I and II, putative
Length = 486
Score = 437 bits (1111), Expect = e-122
Identities = 213/465 (45%), Positives = 315/465 (66%), Gaps = 10/465 (2%)
Frame = +3
Query: 354 EELNENVKKVQYAVRGELYLRASELQKE---------GKRIIFTNVGNPHALGQKPLTFP 506
E +N+ V+ Y GE+ A L+KE + II+ N+GNP ALGQ+P+ F
Sbjct: 12 ETINQKVRIFTYEPCGEIVRHARRLEKEIYENPGSLPFQEIIYCNLGNPQALGQRPINFF 71
Query: 507 RQVVALCQAPFLLDDPNVGLIFPADAIARAKHYLSLAPG-GLGAYSDSRGIPGVRKEVAE 683
R+V++LC P L+D +F A+ RA+ + PG G+Y+ S+G+ G+R+ VA+
Sbjct: 72 REVLSLCDNPSLIDRDEARALFSPCALKRARKIIESLPGRDSGSYTSSQGVRGLREAVAD 131
Query: 684 FIQRRDGYPSDPELIYLTDGASKGVMQMLNAIIRNERDGILVPVPQYPLYSAAISLFGGS 863
I RDG+PS P+ I+LTDGAS + M+ +IR+ DGIL P+P+YPLYSA+I L GG+
Sbjct: 132 GIAARDGFPSKPDNIFLTDGASSAINMMMQILIRSHEDGILCPLPEYPLYSASIILHGGT 191
Query: 864 LVPYYLEEEANWGLDLVSTRQSVAEARSKGITVRAMVIINPGNPTGQCLSEANIRELLNF 1043
+VPY L E++ WGL++ ++ + +AR+ G+T+RAMV+INPGNPTGQ LS N E++ F
Sbjct: 192 MVPYNLTEDSIWGLEIFEVKRCLEDARASGLTIRAMVVINPGNPTGQVLSITNQEEIVEF 251
Query: 1044 CYQEKLVLLADEVYQQNVYQDERPFISARKVMFDMGPPVSREVQLISFHTVSKGYWGECG 1223
C +E LV+LADEVYQ+NVY + + F S +KV +G ++ ++SFH+VS GY+GECG
Sbjct: 252 CRKEGLVILADEVYQENVYTENKRFNSFKKVARSLGYD-HHDLSIVSFHSVSMGYYGECG 310
Query: 1224 QRGGYFEMTNIPPKTVDEIYKVASIALSPNVPGQIFMGLMVNPPKPGDISYLKYSAESKS 1403
+RGGY E+ +DE+YK+AS+ + PN+ GQI + L+++PPK GD ++ + E +
Sbjct: 311 RRGGYMEICGFGDDVIDEMYKLASLTICPNIAGQILISLVMDPPKLGDEAFEIFMVEKEE 370
Query: 1404 ILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCL 1583
SL +RA+ + FN V CN EGAMY FP++RLPQ A+ A+ G PDV+Y
Sbjct: 371 TYSSLLKRAKALQKAFNGLEGVSCNKFEGAMYLFPRLRLPQAAIKAAQLEGVSPDVFYAH 430
Query: 1584 KLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFMDQYQ 1748
+LL+ATGI+ VPGSGF G H+R TILP EE + A++ S + F+++FMD+++
Sbjct: 431 RLLDATGIAVVPGSGFHPVSGTSHIRCTILPGEETITAMVPSLQAFHEAFMDEFR 485
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131562212
Number of Sequences: 59712
Number of extensions: 3816795
Number of successful extensions: 24958
Number of sequences better than 1.0e-10: 30
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 24922
Number of HSP's gapped (non-prelim): 17
length of query: 678
length of database: 26,991,925
effective HSP length: 53
effective length of query: 624
effective length of database: 23,827,189
effective search space: 14868165936
effective search space used: 14868165936
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 161 (67.1 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1686 Members:2 3pri:Y 6e-29
P32024 23 KD JASMONATE-INDUCED PROTEIN pir||S22514
jasmonate-induced protein 1 - barley
(847 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching..................................................done
***** No hits found ******
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40574703
Number of Sequences: 59712
Number of extensions: 826219
Number of successful extensions: 1340
Number of sequences better than 1.0e-10: 0
Number of HSP's better than 0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1340
Number of HSP's gapped (non-prelim): 0
length of query: 282
length of database: 26,991,925
effective HSP length: 50
effective length of query: 231
effective length of database: 24,006,325
effective search space: 5545461075
effective search space used: 5545461075
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 158 (66.0 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1736 Members:91 3pri:Y 1e-122
P29114 Lipoxygenase 1 pir||T05941 lipoxygenase (EC
1.13.11.12) 1 - barley
(2843 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m04810|protein putative lipoxygenase 1490 0.0
9631.m05177|protein lipoxygenase L-2; lipoxygenase 1393 0.0
9631.m04802|protein putative lipoxygenase 1355 0.0
9631.m04812|protein putative lipoxygenase 1225 0.0
9631.m04813|protein putative lipoxygenase 1150 0.0
9639.m03317|protein Lipoxygenase 879 0.0
9633.m02124|protein lipoxygenase 688 0.0
9632.m03516|protein Lipoxygenase, putative 664 0.0
9631.m00759|protein Lipoxygenase, putative 641 0.0
9636.m04027|protein lipoxygenase, chloroplast precursor (... 621 e-177
9636.m04030|protein Lipoxygenase, putative 619 e-177
9636.m04029|protein Lipoxygenase, putative 619 e-177
9630.m00928|protein lipoxygenase 2.3, chloroplast precurs... 613 e-175
9640.m03614|protein lipoxygenase 557 e-158
9640.m03623|protein Lipoxygenase 398 e-110
9630.m01890|protein Similar to lipoxygenase III 186 1e-46
9634.m00355|protein Similar to lipoxygenase III 119 2e-26
9640.m03620|protein Similar to lipoxygenase 95 5e-19
9629.m05120|protein retrotransposon protein, putative, Ty... 80 2e-14
9633.m02267|protein retrotransposon protein, putative, un... 78 8e-14
9631.m04810|protein putative lipoxygenase
Length = 866
Score = 1490 bits (3816), Expect = 0.0
Identities = 712/861 (82%), Positives = 784/861 (90%), Gaps = 6/861 (0%)
Frame = +2
Query: 98 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 277
+LGG+IDT+TG++K +RLKGTVVLMRKNVLDLNDFGAT+IDG+GEFLGKGVTCQLISSTA
Sbjct: 1 MLGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTA 60
Query: 278 VDQDNGGRGKVGAEAELEQWVTS-LPSLTTGESKFGLTFDWEVEKLGVPGAIVVNNYHSS 454
VD +NG RGKVGAEA LEQW+TS LPSLTTGES+FG+TFDW+V+KLGVPGAI+V N+HS+
Sbjct: 61 VDPNNGNRGKVGAEASLEQWLTSSLPSLTTGESRFGVTFDWDVDKLGVPGAIIVKNHHSN 120
Query: 455 EFLLKTITLHDVPGRSGNLTFVANSWIYPAANYRYSRVFFANDTYLPSQMPAALKPYRDD 634
EF LKTITL DVPGR+G + F+ANSW+YPA YRY RVFFAND YLPSQMPAALKPYRDD
Sbjct: 121 EFFLKTITLDDVPGRAGAVVFLANSWVYPADKYRYDRVFFANDAYLPSQMPAALKPYRDD 180
Query: 635 ELRNLRGDDQQGPYQEHDRIYRYDVYNDLGEG-----RPILGGNSDHPYPRRGRTERKPN 799
ELRNLRGDDQQGPY+EHDR+YRYDVYNDLG RPILGG+ D PYPRRGRT RKP
Sbjct: 181 ELRNLRGDDQQGPYEEHDRVYRYDVYNDLGSPDSGNPRPILGGSPDTPYPRRGRTGRKPT 240
Query: 800 ASDPSLESRLSLLEQIYVPRDEKFGHLKTSDFLGYSIKAITQGILPAVRTYVDTTPGEFD 979
+DP ESRLSL+EQIYVPRDE+FGHLK +DFLGYSIKAI +GI+PA+RTYVDTTPGEFD
Sbjct: 241 TTDPDSESRLSLVEQIYVPRDERFGHLKMADFLGYSIKAIAEGIVPAIRTYVDTTPGEFD 300
Query: 980 SFQDIINLYEGGIKLPKVAALEELRKQFPLQLIKDLLPVGGDSLLKLPVPHIIQENKQAW 1159
SFQDI++LYEGG+KLP V ALEELRK+FPLQL+KDLLP GD +LKLP+P II+++K+AW
Sbjct: 301 SFQDILDLYEGGLKLPDVPALEELRKRFPLQLVKDLLPAAGDYILKLPMPQIIKQDKEAW 360
Query: 1160 RTDEEFAREVLAGVNPVMITRLTEFPPKSSLDPSKFGDHTSTITAEHIEKNLEGLTVQQA 1339
RTDEEFAREVLAGVNP+MITRLTEFPPKSSLDPSKFGDHTS ITA HI NLEGLTVQQA
Sbjct: 361 RTDEEFAREVLAGVNPMMITRLTEFPPKSSLDPSKFGDHTSMITAAHIGSNLEGLTVQQA 420
Query: 1340 LESNRLYILDHHDRFMPFLIDVNNLPGNFIYATRTLFFLRGDGRLTPLAIELSEPIIQGG 1519
L+SNRLYILDHHDRFMPFLIDVN L GNFIYATRTLFFLRGDG L PLAIELSEP+IQG
Sbjct: 421 LDSNRLYILDHHDRFMPFLIDVNGLEGNFIYATRTLFFLRGDGTLAPLAIELSEPMIQGD 480
Query: 1520 LTTAKSKVYTPVPSGSVEGWVWELAKAYVAVNDSGWHQLVSHWLNTHAVMEPFVISTNRH 1699
+T AKS VYTP +G VE WVW+LAKAYVAVNDSGWHQL+SHWLNTHAVMEPFVI+TNR
Sbjct: 481 VTAAKSTVYTPASTG-VEAWVWQLAKAYVAVNDSGWHQLISHWLNTHAVMEPFVIATNRQ 539
Query: 1700 LSVTHPVHKLLSPHYRDTMTINALARQTLINAGGIFEMTVFPGKFALGMSAVVYKDWKFT 1879
LSVTHPVHKLLSPHYRDTMTINALARQTLINAGGIFEMTVFPGK+AL MS++VYK+W FT
Sbjct: 540 LSVTHPVHKLLSPHYRDTMTINALARQTLINAGGIFEMTVFPGKYALWMSSMVYKNWNFT 599
Query: 1880 EQGLPDDLIKRGMAVEDPSSPYKVRLLVSDYPYAADGLAIWHAIEQYVSEYLAIYYPNDG 2059
EQGLP DLIKRG+AVED +SPYKVRLL+ DYPYAADGL IWHAIEQ+V EYLAIYY +DG
Sbjct: 600 EQGLPADLIKRGVAVEDATSPYKVRLLIKDYPYAADGLEIWHAIEQWVGEYLAIYYTDDG 659
Query: 2060 VLQGDTEVQAWWKETREVGHGDLKDAPWWPKMQSVPELAKACTTIIWIGSALHAAVNFGQ 2239
VL+GD E+QAWW E REVGHGDLK A WWP+M +V EL ACTTIIWI SALHAAVNFGQ
Sbjct: 660 VLRGDAELQAWWAEVREVGHGDLKGAAWWPRMDAVSELRDACTTIIWIASALHAAVNFGQ 719
Query: 2240 YPYAGFLPNRPTVSRRRMPEPGTEEYAELERDPERAFIHTITSQIQTIIGVSLLEVLSKH 2419
YPYAG+LPNRPTVSRRRMPEPGTE Y EL RDPERAFI TITSQ+QTIIG+SL+EVLSKH
Sbjct: 720 YPYAGYLPNRPTVSRRRMPEPGTEAYGELGRDPERAFIRTITSQLQTIIGISLIEVLSKH 779
Query: 2420 SSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYM 2599
SSDE+YLGQRDTP WTSD +ALE F+RFSDRLVEIE KVVGMN D LKNRNGPA+FPYM
Sbjct: 780 SSDEVYLGQRDTPAWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYM 839
Query: 2600 LLYPNTSDHKGAAAGLTAKGIPNSISI 2680
LLYPNTSD GAAAG+TAKGIPNSISI
Sbjct: 840 LLYPNTSDVTGAAAGITAKGIPNSISI 866
9631.m05177|protein lipoxygenase L-2; lipoxygenase
Length = 870
Score = 1393 bits (3566), Expect = 0.0
Identities = 655/861 (76%), Positives = 755/861 (87%), Gaps = 11/861 (1%)
Frame = +2
Query: 98 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 277
+LGG+I LTG NK+ARLKG++VLMRKN LD+NDFGAT+IDGI EFLG+GVTCQL+SS+
Sbjct: 1 MLGGIIGGLTG-NKNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSL 59
Query: 278 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNNYHSSE 457
VD +NG RG+VG EA LEQW+TSLPSLTTGESKFG+TF+WEVEK+G+PGAI+V N H++E
Sbjct: 60 VDPNNGNRGRVGTEASLEQWLTSLPSLTTGESKFGVTFEWEVEKMGIPGAIIVKNNHAAE 119
Query: 458 FLLKTITLHDVPGRSGNLTFVANSWIYPAANYRYSRVFFANDTYLPSQMPAALKPYRDDE 637
F LKTITL +VPG G + FVANSWIYPA+ YRY+RVFF+NDT LPS+MPAALKPYRDDE
Sbjct: 120 FFLKTITLDNVPGH-GAVVFVANSWIYPASKYRYNRVFFSNDTSLPSKMPAALKPYRDDE 178
Query: 638 LRNLRGDDQQGPYQEHDRIYRYDVYNDLGEG-----RPILGGNSDHPYPRRGRTERKPNA 802
LRNLRGDDQQGPYQEHDR+YRYDVYNDLGE RP+LGG+ D PYPRRGRT RKP
Sbjct: 179 LRNLRGDDQQGPYQEHDRVYRYDVYNDLGEPDSGNPRPVLGGSPDRPYPRRGRTGRKPTK 238
Query: 803 SDPSLESRLSLLEQIYVPRDEKFGHLKTSDFLGYSIKAITQGILPAVRTYVDTTPGEFDS 982
+DP+ ESRLSLLE IYVPRDE+FGHLK +DFLGYSIKA+ GI+PA+RTYVD TPGEFDS
Sbjct: 239 TDPTAESRLSLLENIYVPRDERFGHLKMADFLGYSIKALVDGIVPAIRTYVDLTPGEFDS 298
Query: 983 FQDIINLYEGGIKLPKVAALEELRKQFPLQLIKDLLPVGGDSLLKLPVPHIIQENKQAWR 1162
F+DI+ LYEGG+KLP + ALEELRK+FPLQL+KDL+P GGD LLKLP+PH+I+E+K+AW
Sbjct: 299 FKDILKLYEGGLKLPSIPALEELRKRFPLQLVKDLIPAGGDYLLKLPMPHVIREDKKAWM 358
Query: 1163 TDEEFAREVLAGVNPVMITRLTEFPPKSSLDPSKFGDHTSTITAEHIEKNLEGLTVQQAL 1342
TD+EFARE+LAGVNP++I RLTEFPP+S LDP+++GD TSTITA H+E+ LEGLTVQQA+
Sbjct: 359 TDDEFAREILAGVNPMVIARLTEFPPRSRLDPARYGDQTSTITAAHVERGLEGLTVQQAI 418
Query: 1343 ESNRLYILDHHDRFMPFLIDVNNLPGNFIYATRTLFFLRGDGRLTPLAIELSEPIIQG-G 1519
+ N LY++DHHD FMP+L+D+N+L NFIYATRTL FLRGDG L PLAIELS P +Q G
Sbjct: 419 DGNLLYVVDHHDHFMPYLLDINSLDDNFIYATRTLLFLRGDGTLAPLAIELSLPHLQDDG 478
Query: 1520 LTTAKSKVYTPVP-----SGSVEGWVWELAKAYVAVNDSGWHQLVSHWLNTHAVMEPFVI 1684
L TA+S VYTP +G+VE WVW+LAKAYV VND WHQL+SHWLNTHAVMEPFVI
Sbjct: 479 LITARSTVYTPAARGGTGAGAVEWWVWQLAKAYVNVNDYCWHQLISHWLNTHAVMEPFVI 538
Query: 1685 STNRHLSVTHPVHKLLSPHYRDTMTINALARQTLINAGGIFEMTVFPGKFALGMSAVVYK 1864
+TNR LSV HPVHKLL PHYRDTMTINALARQTLIN GGIFEMTVFP K AL MS+ YK
Sbjct: 539 ATNRQLSVAHPVHKLLLPHYRDTMTINALARQTLINGGGIFEMTVFPRKHALAMSSAFYK 598
Query: 1865 DWKFTEQGLPDDLIKRGMAVEDPSSPYKVRLLVSDYPYAADGLAIWHAIEQYVSEYLAIY 2044
DW F +Q LPDDL+KRG+AV DP+SPYKVRLL+ DYPYA DGLA+WHAIEQ+ +EYLAIY
Sbjct: 599 DWSFADQALPDDLVKRGVAVPDPASPYKVRLLIEDYPYANDGLAVWHAIEQWATEYLAIY 658
Query: 2045 YPNDGVLQGDTEVQAWWKETREVGHGDLKDAPWWPKMQSVPELAKACTTIIWIGSALHAA 2224
YPNDGVLQGD E+QAWWKE REVGHGD+KDA WWP+M++V EL KAC TIIWIGSALHAA
Sbjct: 659 YPNDGVLQGDAELQAWWKEVREVGHGDIKDATWWPEMKTVAELVKACATIIWIGSALHAA 718
Query: 2225 VNFGQYPYAGFLPNRPTVSRRRMPEPGTEEYAELERDPERAFIHTITSQIQTIIGVSLLE 2404
VNFGQYPYAG+LPNRP+VSRR MPEPGT+EY EL RDPE+ F+ TIT Q+Q I+G+SLLE
Sbjct: 719 VNFGQYPYAGYLPNRPSVSRRPMPEPGTKEYDELARDPEKVFVRTITKQMQAIVGISLLE 778
Query: 2405 VLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPA 2584
+LSKHSSDE+YLGQRDTPEWTSD KALE FKRF RL EIES+VV MN DP KNR GP
Sbjct: 779 ILSKHSSDEVYLGQRDTPEWTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPT 838
Query: 2585 KFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 2680
FPY LLYPNTSD KG AAGL+A+GIPNSISI
Sbjct: 839 NFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870
9631.m04802|protein putative lipoxygenase
Length = 863
Score = 1355 bits (3468), Expect = 0.0
Identities = 643/861 (74%), Positives = 739/861 (85%), Gaps = 5/861 (0%)
Frame = +2
Query: 98 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 277
+LGGL D LTG N + ++KG VLM + +LD DF A+++D + E G +TCQL+S+T
Sbjct: 1 MLGGLKDKLTGKNGN-KIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATV 59
Query: 278 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNNYHSSE 457
DQ+N GRG VG+EA LEQ +T LPS++ GESK + F+WE++K GVPGAI++ N+HS++
Sbjct: 60 ADQNNEGRGIVGSEANLEQGLTDLPSVSQGESKLTVRFNWEMDKHGVPGAIIIKNHHSTK 119
Query: 458 FLLKTITLHDVPGRSGNLTFVANSWIYPAANYRYSRVFFANDTYLPSQMPAALKPYRDDE 637
F LKTITLHDVPG + FVANSWIYP Y Y+R+FFAN++YLPSQMP AL+PYR+DE
Sbjct: 120 FFLKTITLHDVPG-CDTIVFVANSWIYPVGKYHYNRIFFANNSYLPSQMPEALRPYREDE 178
Query: 638 LRNLRGDDQQGPYQEHDRIYRYDVYNDLGEG-----RPILGGNSDHPYPRRGRTERKPNA 802
LR LRG+D+QGPYQEHDRIYRYDVYNDLGE RP+LGG+ HPYPRRGRT R P
Sbjct: 179 LRYLRGEDRQGPYQEHDRIYRYDVYNDLGEPDRDNPRPVLGGSQKHPYPRRGRTGRIPTK 238
Query: 803 SDPSLESRLSLLEQIYVPRDEKFGHLKTSDFLGYSIKAITQGILPAVRTYVDTTPGEFDS 982
DP+ ESRLSLLEQIYVP DE+F HLK SDF GYSIKAI QGILPA+RTYVD TPGEFDS
Sbjct: 239 KDPNSESRLSLLEQIYVPSDERFAHLKMSDFAGYSIKAIVQGILPAIRTYVDLTPGEFDS 298
Query: 983 FQDIINLYEGGIKLPKVAALEELRKQFPLQLIKDLLPVGGDSLLKLPVPHIIQENKQAWR 1162
F+DI+ LY GG+KLP + ALEELRK FP+QLIKDLLPVGG LLK P P II+EN+ AWR
Sbjct: 299 FEDILKLYRGGLKLPSIPALEELRKSFPVQLIKDLLPVGGSYLLKFPKPDIIKENEVAWR 358
Query: 1163 TDEEFAREVLAGVNPVMITRLTEFPPKSSLDPSKFGDHTSTITAEHIEKNLEGLTVQQAL 1342
TDEEFARE+LAG+NP++I RLTEFPPKS+LDPSK+GD TSTIT HIEKNLEGL+VQQAL
Sbjct: 359 TDEEFAREILAGLNPMVIRRLTEFPPKSTLDPSKYGDQTSTITPAHIEKNLEGLSVQQAL 418
Query: 1343 ESNRLYILDHHDRFMPFLIDVNNLPGNFIYATRTLFFLRGDGRLTPLAIELSEPIIQGGL 1522
+SNRLYILDHHD FMPFLID+N+L G F YATRTL FLR D L PLAIELS P I+G L
Sbjct: 419 DSNRLYILDHHDHFMPFLIDINSLDGIFTYATRTLLFLRDDDTLKPLAIELSLPHIEGNL 478
Query: 1523 TTAKSKVYTPVPSGSVEGWVWELAKAYVAVNDSGWHQLVSHWLNTHAVMEPFVISTNRHL 1702
T+AKSKV+TP SG +E WVW+LAKAYVAVNDSGWHQL+SHWLNTHAVMEPFVI+TNR L
Sbjct: 479 TSAKSKVHTPASSG-IESWVWQLAKAYVAVNDSGWHQLISHWLNTHAVMEPFVIATNRQL 537
Query: 1703 SVTHPVHKLLSPHYRDTMTINALARQTLINAGGIFEMTVFPGKFALGMSAVVYKDWKFTE 1882
SVTHPV+KLL PHYRDTMTINALARQTLIN GGIFE TVFPGK AL MS+ VYK+W FTE
Sbjct: 538 SVTHPVYKLLQPHYRDTMTINALARQTLINGGGIFEQTVFPGKHALAMSSAVYKNWNFTE 597
Query: 1883 QGLPDDLIKRGMAVEDPSSPYKVRLLVSDYPYAADGLAIWHAIEQYVSEYLAIYYPNDGV 2062
QGLPDDLIKRG+A++DPSSP KV+LL+ DYPYA DGLAIW AIEQ+V+EY AIYYPNDGV
Sbjct: 598 QGLPDDLIKRGIAIKDPSSPSKVKLLIKDYPYATDGLAIWQAIEQWVTEYCAIYYPNDGV 657
Query: 2063 LQGDTEVQAWWKETREVGHGDLKDAPWWPKMQSVPELAKACTTIIWIGSALHAAVNFGQY 2242
LQGD E+QAWWKE REVGHGDLKDA WWPKMQS+PEL KACTTIIWI SALHAAVNFGQY
Sbjct: 658 LQGDVELQAWWKEVREVGHGDLKDADWWPKMQSLPELTKACTTIIWIASALHAAVNFGQY 717
Query: 2243 PYAGFLPNRPTVSRRRMPEPGTEEYAELERDPERAFIHTITSQIQTIIGVSLLEVLSKHS 2422
PYAG+LPNRPT+SRR MPEPG++EY EL+ +PE+ FI TITSQ QTI+GVSL+E+LSKHS
Sbjct: 718 PYAGYLPNRPTISRRPMPEPGSKEYTELDENPEKFFIRTITSQFQTILGVSLIEILSKHS 777
Query: 2423 SDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYML 2602
+DE+YLGQRDTPEWTSDPKALE FKRFS +LVEIESKV+ MN DP LKNR GPA FPY L
Sbjct: 778 ADEIYLGQRDTPEWTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTL 837
Query: 2603 LYPNTSDHKGAAAGLTAKGIPNSISI 2680
++PNTSD+KGAA G+TA+GIPNSISI
Sbjct: 838 MFPNTSDNKGAAEGITARGIPNSISI 863
9631.m04812|protein putative lipoxygenase
Length = 877
Score = 1225 bits (3135), Expect = 0.0
Identities = 600/862 (69%), Positives = 702/862 (80%), Gaps = 18/862 (2%)
Frame = +2
Query: 95 MLLGGLIDTLTGANKSA----RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLG--KGVTC 256
M + G D LTG NK A R++GT VL++K+VL L DF A+++DG+ LG +GV
Sbjct: 1 MQVQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAF 60
Query: 257 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 436
+L+S+TA D NGGRGK+G A LE+ V ++ S GES F + F+W+ E G+PGA+VV
Sbjct: 61 RLVSATARDPSNGGRGKLGKPAHLEELVVTMKSTAAGESVFRVAFEWD-ESQGIPGAVVV 119
Query: 437 NNYHSSEFLLKTITLHDVPGRSGNLTFVANSWIYPAANYRYSRVFFANDTYLPSQMPAAL 616
N + SEF LKT+TL VPG+ G + FVANSWIYPA NY+Y RVFFANDTYLPS+MPA L
Sbjct: 120 TNSNRSEFFLKTLTLDGVPGK-GTVVFVANSWIYPADNYQYERVFFANDTYLPSKMPAPL 178
Query: 617 KPYRDDELRNLRGDDQQGPYQEHDRIYRYDVYNDLGEG-------RPILGGNSDHPYPRR 775
PYR +EL LRGD + GPY+EHDRIYRYD YNDLG+ RP+LGG+ + PYPRR
Sbjct: 179 IPYRQEELNILRGDGKIGPYKEHDRIYRYDYYNDLGQPDKGSKLVRPVLGGSQELPYPRR 238
Query: 776 GRTERKPNASDPSLESRLSLLE-QIYVPRDEKFGHLKTSDFLGYSIKAITQGILPAVRTY 952
GRT R P +DP+ ESRL LL+ IYVPRDE+FGHLK SDFLGYS+KAI +G+LP +RTY
Sbjct: 239 GRTGRAPTKTDPNTESRLPLLDLNIYVPRDERFGHLKMSDFLGYSLKAIVEGVLPIIRTY 298
Query: 953 VDTTPGEFDSFQDIINLYEGGIKLPKVAALEELRKQFPLQLIKDLLPVGGDSLLKLPVPH 1132
VDTTP EFDSFQDI+ LYEGG+K+ +AL E++K+ P +LIK LLPV GD +LKLP+PH
Sbjct: 299 VDTTPKEFDSFQDIMELYEGGLKVANASALAEIKKRVPFELIKSLLPVAGDQVLKLPLPH 358
Query: 1133 IIQENKQAWRTDEEFAREVLAGVNPVMITRLTEFPPKSSLDPSKFGDHTSTITAEHIEKN 1312
+I+E+K AWRTDEEFARE+LAGVNPVMI RLT FP KS+LDP+ +GDHTS IT HI+ N
Sbjct: 359 VIKEDKFAWRTDEEFAREMLAGVNPVMIKRLTNFPAKSTLDPNVYGDHTSKITEAHIKHN 418
Query: 1313 LEGLTVQQALESNRLYILDHHDRFMPFLIDVNNLPGNFIYATRTLFFLRGDGRLTPLAIE 1492
+EGLTVQ AL+ NRL+ILDHHD FMPFL +N L GNFIYA+RT+ L+ DG L PLAIE
Sbjct: 419 MEGLTVQNALKGNRLFILDHHDHFMPFLDKINKLDGNFIYASRTILLLKDDGTLKPLAIE 478
Query: 1493 LSEPIIQGGLTTAKSKVYTPVPSGSVEGWVWELAKAYVAVNDSGWHQLVSHWLNTHAVME 1672
LS P G A SKVYTP +G VE +W+LAKAY +VNDS WHQL+SHWLNTHAV+E
Sbjct: 479 LSLPHPDGQQHGAVSKVYTPANTG-VESQIWQLAKAYASVNDSAWHQLISHWLNTHAVIE 537
Query: 1673 PFVISTNRHLSVTHPVHKLLSPHYRDTMTINALARQTLINAGGIFEMTVFPGKFALGMSA 1852
PFVI+TNR LSV HPVHKLLSPHYRDTM INALARQTLINA GIFE TVFPGK+AL MS+
Sbjct: 538 PFVIATNRQLSVVHPVHKLLSPHYRDTMNINALARQTLINADGIFEKTVFPGKYALEMSS 597
Query: 1853 VVYKDWKFTEQGLPDDLIKRGMAVEDPSSPYKVRLLVSDYPYAADGLAIWHAIEQYVSEY 2032
VVYK+WKFTEQ LP DL+KRG+AV DP+SPY VRLL+ DYPYA DGL IW AIE++V EY
Sbjct: 598 VVYKNWKFTEQALPVDLVKRGVAVPDPTSPYNVRLLIKDYPYAVDGLVIWWAIERWVGEY 657
Query: 2033 LAIYYPNDGVLQGDTEVQAWWKETREVGHGDLKDAPWWPKMQSVPELAKACTTIIWIGSA 2212
LAIYYPNDGVL+GD E+QAWWKE REVGHGDLKD WWPKM +V EL +ACT IIWI SA
Sbjct: 658 LAIYYPNDGVLRGDEELQAWWKEVREVGHGDLKDQDWWPKMDTVQELTRACTIIIWIASA 717
Query: 2213 LHAAVNFGQYPYAGFLPNRPTVSRRRMPEPGTEEYAELERDPERA---FIHTITSQIQTI 2383
LHAAVNFGQYPYAGFLPNRPTVSRR MPEPGTEEYA+LER + A FIHTITSQ QTI
Sbjct: 718 LHAAVNFGQYPYAGFLPNRPTVSRRPMPEPGTEEYAKLERGGDEADLVFIHTITSQFQTI 777
Query: 2384 IGVSLLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPEL 2563
+G+SL+E+LSKHSSDE+YLGQRDTPEWTSD KAL+ FKRF RLV+IE+++ MN + L
Sbjct: 778 LGISLIEILSKHSSDEVYLGQRDTPEWTSDAKALDAFKRFGSRLVDIENRIKDMNGNSAL 837
Query: 2564 KNRNGPAKFPYMLLYPNTSD-HKGAAAGLTAKGIPNSISI 2680
KNRNGP K PYMLLYPNTSD K GLTA GIPNSISI
Sbjct: 838 KNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877
9631.m04813|protein putative lipoxygenase
Length = 787
Score = 1150 bits (2941), Expect = 0.0
Identities = 557/778 (71%), Positives = 642/778 (81%), Gaps = 12/778 (1%)
Frame = +2
Query: 347 LPSLTTGESKFGLTFDWEVEKLGVPGAIVVNNYHSSEFLLKTITLHDVPGRSGNLTFVAN 526
+ S GES F + F+W+ E G+PGA+VV N + SEF LKT+TL VPG+ G + FVAN
Sbjct: 1 MKSTAAGESVFRVAFEWD-ESQGIPGAVVVTNSNRSEFFLKTLTLDGVPGK-GTVVFVAN 58
Query: 527 SWIYPAANYRYSRVFFANDTYLPSQMPAALKPYRDDELRNLRGDDQQGPYQEHDRIYRYD 706
SWIYPA NY+Y RVFFANDTYLPS+MPA L PYR +EL LRGD + GPY+EHDRIYRYD
Sbjct: 59 SWIYPADNYQYERVFFANDTYLPSKMPAPLIPYRQEELNILRGDGKIGPYKEHDRIYRYD 118
Query: 707 VYNDLGEG-------RPILGGNSDHPYPRRGRTERKPNASDPSLESRLSLLE-QIYVPRD 862
YNDLG+ RP+LGG+ + PYPRRGRT R P +DP+ ESRL LL+ IYVPRD
Sbjct: 119 YYNDLGQPDKGSKLVRPVLGGSQELPYPRRGRTGRAPTKTDPNTESRLPLLDLNIYVPRD 178
Query: 863 EKFGHLKTSDFLGYSIKAITQGILPAVRTYVDTTPGEFDSFQDIINLYEGGIKLPKVAAL 1042
E+FGHLK SDFLGYS+KAI +G+LP +RTYVDTTP EFDSFQDI+ LYEGG+K+ +AL
Sbjct: 179 ERFGHLKMSDFLGYSLKAIVEGVLPIIRTYVDTTPKEFDSFQDIMELYEGGLKVANASAL 238
Query: 1043 EELRKQFPLQLIKDLLPVGGDSLLKLPVPHIIQENKQAWRTDEEFAREVLAGVNPVMITR 1222
E++K+ P +LIK LLPV GD +LKLP+PH+I+E+K AWRTDEEFARE+LAGVNPVMI R
Sbjct: 239 AEIKKRVPFELIKSLLPVAGDQVLKLPLPHVIKEDKFAWRTDEEFAREMLAGVNPVMIKR 298
Query: 1223 LTEFPPKSSLDPSKFGDHTSTITAEHIEKNLEGLTVQQALESNRLYILDHHDRFMPFLID 1402
LT FP KS+LDP+ +GDHTS IT HI+ N+EGLTVQ AL+ NRL+ILDHHD FMPFL
Sbjct: 299 LTNFPAKSTLDPNVYGDHTSKITEAHIKHNMEGLTVQNALKGNRLFILDHHDHFMPFLDK 358
Query: 1403 VNNLPGNFIYATRTLFFLRGDGRLTPLAIELSEPIIQGGLTTAKSKVYTPVPSGSVEGWV 1582
+N L GNFIYA+RT+ L+ DG L PLAIELS P G A SKVYTP +G VE +
Sbjct: 359 INKLDGNFIYASRTILLLKDDGTLKPLAIELSLPHPDGQQHGAVSKVYTPANTG-VESQI 417
Query: 1583 WELAKAYVAVNDSGWHQLVSHWLNTHAVMEPFVISTNRHLSVTHPVHKLLSPHYRDTMTI 1762
W+LAKAY +VNDS WHQL+SHWLNTHAV+EPFVI+TNR LSV HPVHKLLSPHYRDTM I
Sbjct: 418 WQLAKAYASVNDSAWHQLISHWLNTHAVIEPFVIATNRQLSVVHPVHKLLSPHYRDTMNI 477
Query: 1763 NALARQTLINAGGIFEMTVFPGKFALGMSAVVYKDWKFTEQGLPDDLIKRGMAVEDPSSP 1942
NALARQTLINA GIFE TVFPGK+AL MS+VVYK+WKFTEQ LP DL+KRG+AV DP+SP
Sbjct: 478 NALARQTLINADGIFEKTVFPGKYALEMSSVVYKNWKFTEQALPVDLVKRGVAVPDPTSP 537
Query: 1943 YKVRLLVSDYPYAADGLAIWHAIEQYVSEYLAIYYPNDGVLQGDTEVQAWWKETREVGHG 2122
Y VRLL+ DYPYA DGL IW AIE++V EYLAIYYPNDGVL+GD E+QAWWKE REVGHG
Sbjct: 538 YNVRLLIKDYPYAVDGLVIWWAIERWVGEYLAIYYPNDGVLRGDEELQAWWKEVREVGHG 597
Query: 2123 DLKDAPWWPKMQSVPELAKACTTIIWIGSALHAAVNFGQYPYAGFLPNRPTVSRRRMPEP 2302
DLKD WWPKM +V EL +ACT IIWI SALHAAVNFGQYPYAGFLPNRPTVSRR MPEP
Sbjct: 598 DLKDQDWWPKMDTVQELTRACTIIIWIASALHAAVNFGQYPYAGFLPNRPTVSRRPMPEP 657
Query: 2303 GTEEYAELERDPERA---FIHTITSQIQTIIGVSLLEVLSKHSSDELYLGQRDTPEWTSD 2473
GTEEYA+LER + A FIHTITSQ QTI+G+SL+E+LSKHSSDE+YLGQRDTPEWTSD
Sbjct: 658 GTEEYAKLERGGDEADLVFIHTITSQFQTILGISLIEILSKHSSDEVYLGQRDTPEWTSD 717
Query: 2474 PKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSD-HKGAAAGLT 2650
KAL+ FKRF RLV+IE+++ MN + LKNRNGP K PYMLLYPNTSD K GLT
Sbjct: 718 AKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLT 777
Query: 2651 AKGIPNSISI 2680
A GIPNSISI
Sbjct: 778 AMGIPNSISI 787
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 215273526
Number of Sequences: 59712
Number of extensions: 7951010
Number of successful extensions: 129052
Number of sequences better than 1.0e-10: 44
Number of HSP's better than 0.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 128379
Number of HSP's gapped (non-prelim): 180
length of query: 947
length of database: 26,991,925
effective HSP length: 54
effective length of query: 893
effective length of database: 23,767,477
effective search space: 21224356961
effective search space used: 21224356961
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 163 (67.9 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1737 Members:27 3pri:Y 1e-141
T05943 probable lipoxygenase (EC 1.13.11.12) - barley
gb|AAB60715.1| lipoxygenase [Hordeum vulgare]
(3097 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9631.m04812|protein putative lipoxygenase 1428 0.0
9631.m04813|protein putative lipoxygenase 1284 0.0
9631.m04810|protein putative lipoxygenase 1180 0.0
9631.m04802|protein putative lipoxygenase 1155 0.0
9631.m05177|protein lipoxygenase L-2; lipoxygenase 1150 0.0
9639.m03317|protein Lipoxygenase 847 0.0
9633.m02124|protein lipoxygenase 716 0.0
9632.m03516|protein Lipoxygenase, putative 645 0.0
9636.m04027|protein lipoxygenase, chloroplast precursor (... 630 e-180
9631.m00759|protein Lipoxygenase, putative 626 e-179
9636.m04030|protein Lipoxygenase, putative 624 e-178
9636.m04029|protein Lipoxygenase, putative 624 e-178
9630.m00928|protein lipoxygenase 2.3, chloroplast precurs... 623 e-178
9640.m03614|protein lipoxygenase 571 e-162
9640.m03623|protein Lipoxygenase 398 e-110
9630.m01890|protein Similar to lipoxygenase III 178 5e-44
9634.m00355|protein Similar to lipoxygenase III 122 3e-27
9640.m03620|protein Similar to lipoxygenase 102 3e-21
9631.m04812|protein putative lipoxygenase
Length = 877
Score = 1428 bits (3656), Expect = 0.0
Identities = 694/878 (79%), Positives = 766/878 (87%), Gaps = 6/878 (0%)
Frame = +2
Query: 134 MLLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSF 313
M + G DRLTG+NKEAWKEG+IRGTAVLVK DVL LGDFHASLLDGVH ILG +GV+F
Sbjct: 1 MQVQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAF 60
Query: 314 RLVSATAPDPQNGSRGKVGKPAHLEEMVVTMKSTAAGESVFKVTFEWDESQGVPGAVIVR 493
RLVSATA DP NG RGK+GKPAHLEE+VVTMKSTAAGESVF+V FEWDESQG+PGAV+V
Sbjct: 61 RLVSATARDPSNGGRGKLGKPAHLEELVVTMKSTAAGESVFRVAFEWDESQGIPGAVVVT 120
Query: 494 NTYRSEYLLKTLTLHGVPGKGTVVFVANSWIYP----NVDRLFFANDTYLPSKMPALLVQ 661
N+ RSE+ LKTLTL GVPGKGTVVFVANSWIYP +R+FFANDTYLPSKMPA L+
Sbjct: 121 NSNRSEFFLKTLTLDGVPGKGTVVFVANSWIYPADNYQYERVFFANDTYLPSKMPAPLIP 180
Query: 662 YRQDELNNLRGDDTTGEYKEADRVYRYDYYNDLGEPDNDNP--RPVLGGTQELPYPRRCR 835
YRQ+ELN LRGD G YKE DR+YRYDYYNDLG+PD + RPVLGG+QELPYPRR R
Sbjct: 181 YRQEELNILRGDGKIGPYKEHDRIYRYDYYNDLGQPDKGSKLVRPVLGGSQELPYPRRGR 240
Query: 836 TGRPPTETDPRSESRIPKYKIKEALNIYVPRDERFGHLKLSDFLGYSLKAITEAILPIIR 1015
TGR PT+TDP +ESR+P LNIYVPRDERFGHLK+SDFLGYSLKAI E +LPIIR
Sbjct: 241 TGRAPTKTDPNTESRLPLLD----LNIYVPRDERFGHLKMSDFLGYSLKAIVEGVLPIIR 296
Query: 1016 TYVDSTPKEFDSFQDIYNLYDGLLKVPDNQHLKELKNKIPLQFIKSLLPVAGDDLLNLPL 1195
TYVD+TPKEFDSFQDI LY+G LKV + L E+K ++P + IKSLLPVAGD +L LPL
Sbjct: 297 TYVDTTPKEFDSFQDIMELYEGGLKVANASALAEIKKRVPFELIKSLLPVAGDQVLKLPL 356
Query: 1196 PHVIKSDKYAWRSDEEFAREMLAAVNPVCIRRLTKFPVKKYLDPSVYGDQSSTITEDQIQ 1375
PHVIK DK+AWR+DEEFAREMLA VNPV I+RLT FP K LDP+VYGD +S ITE I+
Sbjct: 357 PHVIKEDKFAWRTDEEFAREMLAGVNPVMIKRLTNFPAKSTLDPNVYGDHTSKITEAHIK 416
Query: 1376 LNLEDGLTVRQAMDKKRLFILDHHDNFMPFLDRINKLEGNYIYASRTLLFLKADGTLKPL 1555
N+E GLTV+ A+ RLFILDHHD+FMPFLD+INKL+GN+IYASRT+L LK DGTLKPL
Sbjct: 417 HNME-GLTVQNALKGNRLFILDHHDHFMPFLDKINKLDGNFIYASRTILLLKDDGTLKPL 475
Query: 1556 AIELSQPHPDGIQHGAKSTVYLPADINSGVDGQIWQLAKAYASVDDSAWHQLISHWLNTH 1735
AIELS PHPDG QHGA S VY PA N+GV+ QIWQLAKAYASV+DSAWHQLISHWLNTH
Sbjct: 476 AIELSLPHPDGQQHGAVSKVYTPA--NTGVESQIWQLAKAYASVNDSAWHQLISHWLNTH 533
Query: 1736 AVIEPFVIATNRQLSVVHPVHKLLSPHYRDTLNINALARTTLINAGGVFELTVFPGQYAL 1915
AVIEPFVIATNRQLSVVHPVHKLLSPHYRDT+NINALAR TLINA G+FE TVFPG+YAL
Sbjct: 534 AVIEPFVIATNRQLSVVHPVHKLLSPHYRDTMNINALARQTLINADGIFEKTVFPGKYAL 593
Query: 1916 EMSAVVYKNWKLTEQGLPDDLVKRGMAVPDESSPYGIRLLIKDYPYAVDGLVIWWAIERW 2095
EMS+VVYKNWK TEQ LP DLVKRG+AVPD +SPY +RLLIKDYPYAVDGLVIWWAIERW
Sbjct: 594 EMSSVVYKNWKFTEQALPVDLVKRGVAVPDPTSPYNVRLLIKDYPYAVDGLVIWWAIERW 653
Query: 2096 VNEYLAIYYPNDGVLRADKELEEWWKEVREVGHGDLKDADWWPKMVTVQELAKTCTTIIW 2275
V EYLAIYYPNDGVLR D+EL+ WWKEVREVGHGDLKD DWWPKM TVQEL + CT IIW
Sbjct: 654 VGEYLAIYYPNDGVLRGDEELQAWWKEVREVGHGDLKDQDWWPKMDTVQELTRACTIIIW 713
Query: 2276 VASALHAAVNFGQYPYAGYLPNRPTVSRRPMPKEGDEEYEQLKEGGEAADMVFIHTITSQ 2455
+ASALHAAVNFGQYPYAG+LPNRPTVSRRPMP+ G EEY +L+ GG+ AD+VFIHTITSQ
Sbjct: 714 IASALHAAVNFGQYPYAGFLPNRPTVSRRPMPEPGTEEYAKLERGGDEADLVFIHTITSQ 773
Query: 2456 FQTILGITLIEILSKHSSDEVYLGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNK 2635
FQTILGI+LIEILSKHSSDEVYLGQRDTPEWTSDAKAL+AFKRFGSRLV+IE RI DMN
Sbjct: 774 FQTILGISLIEILSKHSSDEVYLGQRDTPEWTSDAKALDAFKRFGSRLVDIENRIKDMNG 833
Query: 2636 DPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 2767
+ ALKNRNGPVKMPYMLLYPNTSD EK GLTAMGIPNS+SI
Sbjct: 834 NSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877
9631.m04813|protein putative lipoxygenase
Length = 787
Score = 1284 bits (3286), Expect = 0.0
Identities = 623/788 (79%), Positives = 688/788 (87%), Gaps = 6/788 (0%)
Frame = +2
Query: 404 MKSTAAGESVFKVTFEWDESQGVPGAVIVRNTYRSEYLLKTLTLHGVPGKGTVVFVANSW 583
MKSTAAGESVF+V FEWDESQG+PGAV+V N+ RSE+ LKTLTL GVPGKGTVVFVANSW
Sbjct: 1 MKSTAAGESVFRVAFEWDESQGIPGAVVVTNSNRSEFFLKTLTLDGVPGKGTVVFVANSW 60
Query: 584 IYP----NVDRLFFANDTYLPSKMPALLVQYRQDELNNLRGDDTTGEYKEADRVYRYDYY 751
IYP +R+FFANDTYLPSKMPA L+ YRQ+ELN LRGD G YKE DR+YRYDYY
Sbjct: 61 IYPADNYQYERVFFANDTYLPSKMPAPLIPYRQEELNILRGDGKIGPYKEHDRIYRYDYY 120
Query: 752 NDLGEPDNDNP--RPVLGGTQELPYPRRCRTGRPPTETDPRSESRIPKYKIKEALNIYVP 925
NDLG+PD + RPVLGG+QELPYPRR RTGR PT+TDP +ESR+P LNIYVP
Sbjct: 121 NDLGQPDKGSKLVRPVLGGSQELPYPRRGRTGRAPTKTDPNTESRLPLLD----LNIYVP 176
Query: 926 RDERFGHLKLSDFLGYSLKAITEAILPIIRTYVDSTPKEFDSFQDIYNLYDGLLKVPDNQ 1105
RDERFGHLK+SDFLGYSLKAI E +LPIIRTYVD+TPKEFDSFQDI LY+G LKV +
Sbjct: 177 RDERFGHLKMSDFLGYSLKAIVEGVLPIIRTYVDTTPKEFDSFQDIMELYEGGLKVANAS 236
Query: 1106 HLKELKNKIPLQFIKSLLPVAGDDLLNLPLPHVIKSDKYAWRSDEEFAREMLAAVNPVCI 1285
L E+K ++P + IKSLLPVAGD +L LPLPHVIK DK+AWR+DEEFAREMLA VNPV I
Sbjct: 237 ALAEIKKRVPFELIKSLLPVAGDQVLKLPLPHVIKEDKFAWRTDEEFAREMLAGVNPVMI 296
Query: 1286 RRLTKFPVKKYLDPSVYGDQSSTITEDQIQLNLEDGLTVRQAMDKKRLFILDHHDNFMPF 1465
+RLT FP K LDP+VYGD +S ITE I+ N+E GLTV+ A+ RLFILDHHD+FMPF
Sbjct: 297 KRLTNFPAKSTLDPNVYGDHTSKITEAHIKHNME-GLTVQNALKGNRLFILDHHDHFMPF 355
Query: 1466 LDRINKLEGNYIYASRTLLFLKADGTLKPLAIELSQPHPDGIQHGAKSTVYLPADINSGV 1645
LD+INKL+GN+IYASRT+L LK DGTLKPLAIELS PHPDG QHGA S VY PA N+GV
Sbjct: 356 LDKINKLDGNFIYASRTILLLKDDGTLKPLAIELSLPHPDGQQHGAVSKVYTPA--NTGV 413
Query: 1646 DGQIWQLAKAYASVDDSAWHQLISHWLNTHAVIEPFVIATNRQLSVVHPVHKLLSPHYRD 1825
+ QIWQLAKAYASV+DSAWHQLISHWLNTHAVIEPFVIATNRQLSVVHPVHKLLSPHYRD
Sbjct: 414 ESQIWQLAKAYASVNDSAWHQLISHWLNTHAVIEPFVIATNRQLSVVHPVHKLLSPHYRD 473
Query: 1826 TLNINALARTTLINAGGVFELTVFPGQYALEMSAVVYKNWKLTEQGLPDDLVKRGMAVPD 2005
T+NINALAR TLINA G+FE TVFPG+YALEMS+VVYKNWK TEQ LP DLVKRG+AVPD
Sbjct: 474 TMNINALARQTLINADGIFEKTVFPGKYALEMSSVVYKNWKFTEQALPVDLVKRGVAVPD 533
Query: 2006 ESSPYGIRLLIKDYPYAVDGLVIWWAIERWVNEYLAIYYPNDGVLRADKELEEWWKEVRE 2185
+SPY +RLLIKDYPYAVDGLVIWWAIERWV EYLAIYYPNDGVLR D+EL+ WWKEVRE
Sbjct: 534 PTSPYNVRLLIKDYPYAVDGLVIWWAIERWVGEYLAIYYPNDGVLRGDEELQAWWKEVRE 593
Query: 2186 VGHGDLKDADWWPKMVTVQELAKTCTTIIWVASALHAAVNFGQYPYAGYLPNRPTVSRRP 2365
VGHGDLKD DWWPKM TVQEL + CT IIW+ASALHAAVNFGQYPYAG+LPNRPTVSRRP
Sbjct: 594 VGHGDLKDQDWWPKMDTVQELTRACTIIIWIASALHAAVNFGQYPYAGFLPNRPTVSRRP 653
Query: 2366 MPKEGDEEYEQLKEGGEAADMVFIHTITSQFQTILGITLIEILSKHSSDEVYLGQRDTPE 2545
MP+ G EEY +L+ GG+ AD+VFIHTITSQFQTILGI+LIEILSKHSSDEVYLGQRDTPE
Sbjct: 654 MPEPGTEEYAKLERGGDEADLVFIHTITSQFQTILGISLIEILSKHSSDEVYLGQRDTPE 713
Query: 2546 WTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKA 2725
WTSDAKAL+AFKRFGSRLV+IE RI DMN + ALKNRNGPVKMPYMLLYPNTSD EK
Sbjct: 714 WTSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKG 773
Query: 2726 LGLTAMGIPNSVSI 2767
GLTAMGIPNS+SI
Sbjct: 774 QGLTAMGIPNSISI 787
9631.m04810|protein putative lipoxygenase
Length = 866
Score = 1180 bits (3020), Expect = 0.0
Identities = 583/877 (66%), Positives = 695/877 (78%), Gaps = 7/877 (0%)
Frame = +2
Query: 137 LLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFR 316
+L G++D +TG +K++ +++GT VL++ +VLDL DF A+++DG+ + LGK GV+ +
Sbjct: 1 MLGGIIDTITGSSKQS----RLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGK--GVTCQ 54
Query: 317 LVSATAPDPQNGSRGKVGKPAHLEEMVVT-MKSTAAGESVFKVTFEWD-ESQGVPGAVIV 490
L+S+TA DP NG+RGKVG A LE+ + + + S GES F VTF+WD + GVPGA+IV
Sbjct: 55 LISSTAVDPNNGNRGKVGAEASLEQWLTSSLPSLTTGESRFGVTFDWDVDKLGVPGAIIV 114
Query: 491 RNTYRSEYLLKTLTLHGVPGK-GTVVFVANSWIYP----NVDRLFFANDTYLPSKMPALL 655
+N + +E+ LKT+TL VPG+ G VVF+ANSW+YP DR+FFAND YLPS+MPA L
Sbjct: 115 KNHHSNEFFLKTITLDDVPGRAGAVVFLANSWVYPADKYRYDRVFFANDAYLPSQMPAAL 174
Query: 656 VQYRQDELNNLRGDDTTGEYKEADRVYRYDYYNDLGEPDNDNPRPVLGGTQELPYPRRCR 835
YR DEL NLRGDD G Y+E DRVYRYD YNDLG PD+ NPRP+LGG+ + PYPRR R
Sbjct: 175 KPYRDDELRNLRGDDQQGPYEEHDRVYRYDVYNDLGSPDSGNPRPILGGSPDTPYPRRGR 234
Query: 836 TGRPPTETDPRSESRIPKYKIKEALNIYVPRDERFGHLKLSDFLGYSLKAITEAILPIIR 1015
TGR PT TDP SESR+ + IYVPRDERFGHLK++DFLGYS+KAI E I+P IR
Sbjct: 235 TGRKPTTTDPDSESRLSLVE-----QIYVPRDERFGHLKMADFLGYSIKAIAEGIVPAIR 289
Query: 1016 TYVDSTPKEFDSFQDIYNLYDGLLKVPDNQHLKELKNKIPLQFIKSLLPVAGDDLLNLPL 1195
TYVD+TP EFDSFQDI +LY+G LK+PD L+EL+ + PLQ +K LLP AGD +L LP+
Sbjct: 290 TYVDTTPGEFDSFQDILDLYEGGLKLPDVPALEELRKRFPLQLVKDLLPAAGDYILKLPM 349
Query: 1196 PHVIKSDKYAWRSDEEFAREMLAAVNPVCIRRLTKFPVKKYLDPSVYGDQSSTITEDQIQ 1375
P +IK DK AWR+DEEFARE+LA VNP+ I RLT+FP K LDPS +GD +S IT I
Sbjct: 350 PQIIKQDKEAWRTDEEFAREVLAGVNPMMITRLTEFPPKSSLDPSKFGDHTSMITAAHIG 409
Query: 1376 LNLEDGLTVRQAMDKKRLFILDHHDNFMPFLDRINKLEGNYIYASRTLLFLKADGTLKPL 1555
NLE GLTV+QA+D RL+ILDHHD FMPFL +N LEGN+IYA+RTL FL+ DGTL PL
Sbjct: 410 SNLE-GLTVQQALDSNRLYILDHHDRFMPFLIDVNGLEGNFIYATRTLFFLRGDGTLAPL 468
Query: 1556 AIELSQPHPDGIQHGAKSTVYLPADINSGVDGQIWQLAKAYASVDDSAWHQLISHWLNTH 1735
AIELS+P G AKSTVY PA ++GV+ +WQLAKAY +V+DS WHQLISHWLNTH
Sbjct: 469 AIELSEPMIQGDVTAAKSTVYTPA--STGVEAWVWQLAKAYVAVNDSGWHQLISHWLNTH 526
Query: 1736 AVIEPFVIATNRQLSVVHPVHKLLSPHYRDTLNINALARTTLINAGGVFELTVFPGQYAL 1915
AV+EPFVIATNRQLSV HPVHKLLSPHYRDT+ INALAR TLINAGG+FE+TVFPG+YAL
Sbjct: 527 AVMEPFVIATNRQLSVTHPVHKLLSPHYRDTMTINALARQTLINAGGIFEMTVFPGKYAL 586
Query: 1916 EMSAVVYKNWKLTEQGLPDDLVKRGMAVPDESSPYGIRLLIKDYPYAVDGLVIWWAIERW 2095
MS++VYKNW TEQGLP DL+KRG+AV D +SPY +RLLIKDYPYA DGL IW AIE+W
Sbjct: 587 WMSSMVYKNWNFTEQGLPADLIKRGVAVEDATSPYKVRLLIKDYPYAADGLEIWHAIEQW 646
Query: 2096 VNEYLAIYYPNDGVLRADKELEEWWKEVREVGHGDLKDADWWPKMVTVQELAKTCTTIIW 2275
V EYLAIYY +DGVLR D EL+ WW EVREVGHGDLK A WWP+M V EL CTTIIW
Sbjct: 647 VGEYLAIYYTDDGVLRGDAELQAWWAEVREVGHGDLKGAAWWPRMDAVSELRDACTTIIW 706
Query: 2276 VASALHAAVNFGQYPYAGYLPNRPTVSRRPMPKEGDEEYEQLKEGGEAADMVFIHTITSQ 2455
+ASALHAAVNFGQYPYAGYLPNRPTVSRR MP+ G E Y +L G + FI TITSQ
Sbjct: 707 IASALHAAVNFGQYPYAGYLPNRPTVSRRRMPEPGTEAYGEL---GRDPERAFIRTITSQ 763
Query: 2456 FQTILGITLIEILSKHSSDEVYLGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNK 2635
QTI+GI+LIE+LSKHSSDEVYLGQRDTP WTSDA+ALEAF+RF RLVEIE +++ MN
Sbjct: 764 LQTIIGISLIEVLSKHSSDEVYLGQRDTPAWTSDARALEAFRRFSDRLVEIEGKVVGMNG 823
Query: 2636 DPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 2767
D LKNRNGP + PYMLLYPNTSD G A G+TA GIPNS+SI
Sbjct: 824 DAGLKNRNGPAEFPYMLLYPNTSDVTG-AAAGITAKGIPNSISI 866
9631.m04802|protein putative lipoxygenase
Length = 863
Score = 1155 bits (2956), Expect = 0.0
Identities = 571/877 (65%), Positives = 682/877 (77%), Gaps = 5/877 (0%)
Frame = +2
Query: 137 LLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFR 316
+L GL D+LTGKN KI+G AVL+ +LD DF ASLLD VH++ G + ++ +
Sbjct: 1 MLGGLKDKLTGKNGN-----KIKGLAVLMSRKLLDPRDFTASLLDNVHEVFG--NSITCQ 53
Query: 317 LVSATAPDPQNGSRGKVGKPAHLEEMVVTMKSTAAGESVFKVTFEWD-ESQGVPGAVIVR 493
LVSAT D N RG VG A+LE+ + + S + GES V F W+ + GVPGA+I++
Sbjct: 54 LVSATVADQNNEGRGIVGSEANLEQGLTDLPSVSQGESKLTVRFNWEMDKHGVPGAIIIK 113
Query: 494 NTYRSEYLLKTLTLHGVPGKGTVVFVANSWIYP----NVDRLFFANDTYLPSKMPALLVQ 661
N + +++ LKT+TLH VPG T+VFVANSWIYP + +R+FFAN++YLPS+MP L
Sbjct: 114 NHHSTKFFLKTITLHDVPGCDTIVFVANSWIYPVGKYHYNRIFFANNSYLPSQMPEALRP 173
Query: 662 YRQDELNNLRGDDTTGEYKEADRVYRYDYYNDLGEPDNDNPRPVLGGTQELPYPRRCRTG 841
YR+DEL LRG+D G Y+E DR+YRYD YNDLGEPD DNPRPVLGG+Q+ PYPRR RTG
Sbjct: 174 YREDELRYLRGEDRQGPYQEHDRIYRYDVYNDLGEPDRDNPRPVLGGSQKHPYPRRGRTG 233
Query: 842 RPPTETDPRSESRIPKYKIKEALNIYVPRDERFGHLKLSDFLGYSLKAITEAILPIIRTY 1021
R PT+ DP SESR+ + IYVP DERF HLK+SDF GYS+KAI + ILP IRTY
Sbjct: 234 RIPTKKDPNSESRLSLLE-----QIYVPSDERFAHLKMSDFAGYSIKAIVQGILPAIRTY 288
Query: 1022 VDSTPKEFDSFQDIYNLYDGLLKVPDNQHLKELKNKIPLQFIKSLLPVAGDDLLNLPLPH 1201
VD TP EFDSF+DI LY G LK+P L+EL+ P+Q IK LLPV G LL P P
Sbjct: 289 VDLTPGEFDSFEDILKLYRGGLKLPSIPALEELRKSFPVQLIKDLLPVGGSYLLKFPKPD 348
Query: 1202 VIKSDKYAWRSDEEFAREMLAAVNPVCIRRLTKFPVKKYLDPSVYGDQSSTITEDQIQLN 1381
+IK ++ AWR+DEEFARE+LA +NP+ IRRLT+FP K LDPS YGDQ+STIT I+ N
Sbjct: 349 IIKENEVAWRTDEEFAREILAGLNPMVIRRLTEFPPKSTLDPSKYGDQTSTITPAHIEKN 408
Query: 1382 LEDGLTVRQAMDKKRLFILDHHDNFMPFLDRINKLEGNYIYASRTLLFLKADGTLKPLAI 1561
LE GL+V+QA+D RL+ILDHHD+FMPFL IN L+G + YA+RTLLFL+ D TLKPLAI
Sbjct: 409 LE-GLSVQQALDSNRLYILDHHDHFMPFLIDINSLDGIFTYATRTLLFLRDDDTLKPLAI 467
Query: 1562 ELSQPHPDGIQHGAKSTVYLPADINSGVDGQIWQLAKAYASVDDSAWHQLISHWLNTHAV 1741
ELS PH +G AKS V+ PA +SG++ +WQLAKAY +V+DS WHQLISHWLNTHAV
Sbjct: 468 ELSLPHIEGNLTSAKSKVHTPA--SSGIESWVWQLAKAYVAVNDSGWHQLISHWLNTHAV 525
Query: 1742 IEPFVIATNRQLSVVHPVHKLLSPHYRDTLNINALARTTLINAGGVFELTVFPGQYALEM 1921
+EPFVIATNRQLSV HPV+KLL PHYRDT+ INALAR TLIN GG+FE TVFPG++AL M
Sbjct: 526 MEPFVIATNRQLSVTHPVYKLLQPHYRDTMTINALARQTLINGGGIFEQTVFPGKHALAM 585
Query: 1922 SAVVYKNWKLTEQGLPDDLVKRGMAVPDESSPYGIRLLIKDYPYAVDGLVIWWAIERWVN 2101
S+ VYKNW TEQGLPDDL+KRG+A+ D SSP ++LLIKDYPYA DGL IW AIE+WV
Sbjct: 586 SSAVYKNWNFTEQGLPDDLIKRGIAIKDPSSPSKVKLLIKDYPYATDGLAIWQAIEQWVT 645
Query: 2102 EYLAIYYPNDGVLRADKELEEWWKEVREVGHGDLKDADWWPKMVTVQELAKTCTTIIWVA 2281
EY AIYYPNDGVL+ D EL+ WWKEVREVGHGDLKDADWWPKM ++ EL K CTTIIW+A
Sbjct: 646 EYCAIYYPNDGVLQGDVELQAWWKEVREVGHGDLKDADWWPKMQSLPELTKACTTIIWIA 705
Query: 2282 SALHAAVNFGQYPYAGYLPNRPTVSRRPMPKEGDEEYEQLKEGGEAADMVFIHTITSQFQ 2461
SALHAAVNFGQYPYAGYLPNRPT+SRRPMP+ G +EY +L E E FI TITSQFQ
Sbjct: 706 SALHAAVNFGQYPYAGYLPNRPTISRRPMPEPGSKEYTELDENPE---KFFIRTITSQFQ 762
Query: 2462 TILGITLIEILSKHSSDEVYLGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDP 2641
TILG++LIEILSKHS+DE+YLGQRDTPEWTSD KALEAFKRF +LVEIE ++L+MNKDP
Sbjct: 763 TILGVSLIEILSKHSADEIYLGQRDTPEWTSDPKALEAFKRFSRQLVEIESKVLNMNKDP 822
Query: 2642 ALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 2767
LKNR GP PY L++PNTSD G A G+TA GIPNS+SI
Sbjct: 823 LLKNRVGPANFPYTLMFPNTSDNKG-AAEGITARGIPNSISI 863
9631.m05177|protein lipoxygenase L-2; lipoxygenase
Length = 870
Score = 1150 bits (2941), Expect = 0.0
Identities = 562/877 (64%), Positives = 686/877 (78%), Gaps = 11/877 (1%)
Frame = +2
Query: 137 LLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFR 316
+L G++ LTG K +++G+ VL++ + LD+ DF A+++DG+ + LG+ GV+ +
Sbjct: 1 MLGGIIGGLTGN-----KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGR--GVTCQ 53
Query: 317 LVSATAPDPQNGSRGKVGKPAHLEEMVVTMKSTAAGESVFKVTFEWD-ESQGVPGAVIVR 493
LVS++ DP NG+RG+VG A LE+ + ++ S GES F VTFEW+ E G+PGA+IV+
Sbjct: 54 LVSSSLVDPNNGNRGRVGTEASLEQWLTSLPSLTTGESKFGVTFEWEVEKMGIPGAIIVK 113
Query: 494 NTYRSEYLLKTLTLHGVPGKGTVVFVANSWIYP----NVDRLFFANDTYLPSKMPALLVQ 661
N + +E+ LKT+TL VPG G VVFVANSWIYP +R+FF+NDT LPSKMPA L
Sbjct: 114 NNHAAEFFLKTITLDNVPGHGAVVFVANSWIYPASKYRYNRVFFSNDTSLPSKMPAALKP 173
Query: 662 YRQDELNNLRGDDTTGEYKEADRVYRYDYYNDLGEPDNDNPRPVLGGTQELPYPRRCRTG 841
YR DEL NLRGDD G Y+E DRVYRYD YNDLGEPD+ NPRPVLGG+ + PYPRR RTG
Sbjct: 174 YRDDELRNLRGDDQQGPYQEHDRVYRYDVYNDLGEPDSGNPRPVLGGSPDRPYPRRGRTG 233
Query: 842 RPPTETDPRSESRIPKYKIKEALNIYVPRDERFGHLKLSDFLGYSLKAITEAILPIIRTY 1021
R PT+TDP +ESR+ + NIYVPRDERFGHLK++DFLGYS+KA+ + I+P IRTY
Sbjct: 234 RKPTKTDPTAESRLSLLE-----NIYVPRDERFGHLKMADFLGYSIKALVDGIVPAIRTY 288
Query: 1022 VDSTPKEFDSFQDIYNLYDGLLKVPDNQHLKELKNKIPLQFIKSLLPVAGDDLLNLPLPH 1201
VD TP EFDSF+DI LY+G LK+P L+EL+ + PLQ +K L+P GD LL LP+PH
Sbjct: 289 VDLTPGEFDSFKDILKLYEGGLKLPSIPALEELRKRFPLQLVKDLIPAGGDYLLKLPMPH 348
Query: 1202 VIKSDKYAWRSDEEFAREMLAAVNPVCIRRLTKFPVKKYLDPSVYGDQSSTITEDQIQLN 1381
VI+ DK AW +D+EFARE+LA VNP+ I RLT+FP + LDP+ YGDQ+STIT ++
Sbjct: 349 VIREDKKAWMTDDEFAREILAGVNPMVIARLTEFPPRSRLDPARYGDQTSTITAAHVERG 408
Query: 1382 LEDGLTVRQAMDKKRLFILDHHDNFMPFLDRINKLEGNYIYASRTLLFLKADGTLKPLAI 1561
LE GLTV+QA+D L+++DHHD+FMP+L IN L+ N+IYA+RTLLFL+ DGTL PLAI
Sbjct: 409 LE-GLTVQQAIDGNLLYVVDHHDHFMPYLLDINSLDDNFIYATRTLLFLRGDGTLAPLAI 467
Query: 1562 ELSQPH--PDGIQHGAKSTVYLPADINS----GVDGQIWQLAKAYASVDDSAWHQLISHW 1723
ELS PH DG+ A+STVY PA V+ +WQLAKAY +V+D WHQLISHW
Sbjct: 468 ELSLPHLQDDGLIT-ARSTVYTPAARGGTGAGAVEWWVWQLAKAYVNVNDYCWHQLISHW 526
Query: 1724 LNTHAVIEPFVIATNRQLSVVHPVHKLLSPHYRDTLNINALARTTLINAGGVFELTVFPG 1903
LNTHAV+EPFVIATNRQLSV HPVHKLL PHYRDT+ INALAR TLIN GG+FE+TVFP
Sbjct: 527 LNTHAVMEPFVIATNRQLSVAHPVHKLLLPHYRDTMTINALARQTLINGGGIFEMTVFPR 586
Query: 1904 QYALEMSAVVYKNWKLTEQGLPDDLVKRGMAVPDESSPYGIRLLIKDYPYAVDGLVIWWA 2083
++AL MS+ YK+W +Q LPDDLVKRG+AVPD +SPY +RLLI+DYPYA DGL +W A
Sbjct: 587 KHALAMSSAFYKDWSFADQALPDDLVKRGVAVPDPASPYKVRLLIEDYPYANDGLAVWHA 646
Query: 2084 IERWVNEYLAIYYPNDGVLRADKELEEWWKEVREVGHGDLKDADWWPKMVTVQELAKTCT 2263
IE+W EYLAIYYPNDGVL+ D EL+ WWKEVREVGHGD+KDA WWP+M TV EL K C
Sbjct: 647 IEQWATEYLAIYYPNDGVLQGDAELQAWWKEVREVGHGDIKDATWWPEMKTVAELVKACA 706
Query: 2264 TIIWVASALHAAVNFGQYPYAGYLPNRPTVSRRPMPKEGDEEYEQLKEGGEAADMVFIHT 2443
TIIW+ SALHAAVNFGQYPYAGYLPNRP+VSRRPMP+ G +EY++L E VF+ T
Sbjct: 707 TIIWIGSALHAAVNFGQYPYAGYLPNRPSVSRRPMPEPGTKEYDELARDPE---KVFVRT 763
Query: 2444 ITSQFQTILGITLIEILSKHSSDEVYLGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRIL 2623
IT Q Q I+GI+L+EILSKHSSDEVYLGQRDTPEWTSDAKALEAFKRFG+RL EIE R++
Sbjct: 764 ITKQMQAIVGISLLEILSKHSSDEVYLGQRDTPEWTSDAKALEAFKRFGARLTEIESRVV 823
Query: 2624 DMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 2767
MNKDP KNR GP PY LLYPNTSD G+ A GL+A GIPNS+SI
Sbjct: 824 AMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGD-AAGLSARGIPNSISI 870
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 217660047
Number of Sequences: 59712
Number of extensions: 7302560
Number of successful extensions: 118381
Number of sequences better than 1.0e-10: 36
Number of HSP's better than 0.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 118206
Number of HSP's gapped (non-prelim): 42
length of query: 1032
length of database: 26,991,925
effective HSP length: 54
effective length of query: 977
effective length of database: 23,767,477
effective search space: 23220825029
effective search space used: 23220825029
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 163 (67.9 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1741 Members:100 3pri:Y 9e-61
AAO73223.1 hypothetical protein [Oryza sativa (japonica
cultivar-group)]
(1375 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9640.m04213|protein expressed protein 337 2e-92
9631.m04378|protein hypothetical protein 266 3e-72
9636.m00306|protein hypothetical protein 173 6e-43
9631.m04375|protein expressed protein 162 1e-39
9636.m03764|protein hypothetical protein 152 2e-36
9629.m00846|protein expressed protein 148 3e-35
9637.m01182|protein expressed protein 140 5e-33
9637.m02617|protein AC007087 expressed protein 138 2e-32
9629.m03861|protein expressed protein 133 6e-31
9633.m04858|protein CPSF A subunit region, putative 128 3e-29
9632.m00592|protein expressed protein 123 7e-28
9636.m00321|protein hypothetical protein 116 1e-25
9640.m04213|protein expressed protein
Length = 298
Score = 337 bits (856), Expect = 2e-92
Identities = 173/288 (60%), Positives = 212/288 (73%), Gaps = 3/288 (1%)
Frame = +1
Query: 88 GAGMVEVELGPGMGAAESVPPAKRRRVVALKTAASAAGRRPRRARRPSAIQRLFQACRAV 267
G G+VE E G E+ PP KRRRV +A + RR + P +QRLF+ACRAV
Sbjct: 15 GGGVVEEERS---GGVEAAPPVKRRRVAVAPSAGAGGSRRVQAEASP--LQRLFRACRAV 69
Query: 268 FRGPGTVPAPAEVALLRAMLDRMRPEDVGLSSEMAFFRNRDAAAEGTPTITHTTIYKSEK 447
FRG GTVPAP EV LL +MLD+M+PEDVGL ++ FF RD EG P I +TT+Y+ +
Sbjct: 70 FRGTGTVPAPGEVDLLCSMLDKMKPEDVGLRADQEFFTARDDD-EGIPLIKNTTLYECDN 128
Query: 448 FSMVLFFLPTNAVIPLHNHPGMTVFNKLLIGSMHATSYDWADPDDDPANESGASSADAQL 627
F+M++FFLP NA+IPLH+HPGMTVF+KLLIGS+H SYDW DP+ PA +SS D QL
Sbjct: 129 FTMIIFFLPRNAIIPLHDHPGMTVFSKLLIGSLHIRSYDWVDPE--PALSCSSSSGD-QL 185
Query: 628 RLAQLVVDDVFTAPCDTSVLFPTAGGNMHRFRAVAPSAFLDILGPPYSIEEDRDCTYYTD 807
RLA+ VV+ VFTAPCDTSVL+PT GGNMHRFRA+AP A LDILGPPYS E+ RDCTYY
Sbjct: 186 RLAKRVVNGVFTAPCDTSVLYPTTGGNMHRFRAIAPCAILDILGPPYSTEDGRDCTYYRA 245
Query: 808 IPYSQHRMTGG---ELGGDEQEGRRLAWLKEVEMPRDLKMCSVRYGGPPIS 951
IPYS+H + G +L G ++EG RL+WL E +PR L+M +RYGGPPIS
Sbjct: 246 IPYSRHSVKNGAADQLTGVDEEGHRLSWLTET-IPRMLRMRQIRYGGPPIS 295
9631.m04378|protein hypothetical protein
Length = 303
Score = 266 bits (674), Expect(2) = 3e-72
Identities = 150/278 (53%), Positives = 184/278 (65%), Gaps = 10/278 (3%)
Frame = +1
Query: 115 GPGMGAAESVPPAKRRRVVALKTAASAAGRRPRRARRPSAIQRLFQACRAVFRGPGTVPA 294
G G G +V RRRV+ R P A ++RLF ACR VFRGPGTVPA
Sbjct: 35 GGGGGGGGAVVRRTRRRVLL---------RTPEPA---PLLKRLFAACRDVFRGPGTVPA 82
Query: 295 PAEVALLRAMLDRMRPEDVGLSSEMAFFRNRDAAAEGTP-TITHTTIYKSEKFSMVLFFL 471
P +VAL+R +LD++ P DV LS+E FF+ DAAA P IT TTIY FS+V+FFL
Sbjct: 83 PDDVALIRGILDKIGPGDVNLSAEHNFFKATDAAALPHPLAITRTTIYTCTNFSIVIFFL 142
Query: 472 PTNAVIPLHNHPGMTVFNKLLIGSMHATSYDWADPDDDPANESGASSADAQLRLAQLVVD 651
P AVIPLHNHPGMTVF+KLL+GS+H SYDWA+P A+ + +LRLA++V D
Sbjct: 143 PPTAVIPLHNHPGMTVFSKLLLGSLHIKSYDWAEP------AVFAAGSGDRLRLAEVVRD 196
Query: 652 DVFTAPCDTSVLFPTAGGNMHRFRAVAPSAFLDILGPPYSIEEDRDCTYYTDIPYS---- 819
F+AP DT VL+P AGGNMH+F A P A LD+LGPPYS EDRDCTYY D PYS
Sbjct: 197 GGFSAPSDTLVLYPAAGGNMHQFTAATPCALLDVLGPPYS--EDRDCTYYQDFPYSHCPS 254
Query: 820 ----QHRMTGGELGGDE-QEGRRLAWLKEVEMPRDLKMCSVRYGGPPI 948
+ R GG + ++ R+L WLKE MP+DL+M + Y GPPI
Sbjct: 255 DDIAELRRHGGGMDDEQISRMRQLGWLKETAMPKDLEMYEMPYRGPPI 302
Score = 26.2 bits (56), Expect(2) = 3e-72
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 93 RDGGGGAGARDGGGG 137
R GGGG G GGGG
Sbjct: 26 RSGGGGGGGGGGGGG 40
9636.m00306|protein hypothetical protein
Length = 278
Score = 173 bits (434), Expect = 6e-43
Identities = 98/248 (39%), Positives = 140/248 (55%), Gaps = 23/248 (9%)
Frame = +1
Query: 205 RPRRARRPSAIQRLFQACRAVFRGPGTVPAPAE---------VALLRAMLDRMRPEDVGL 357
RP PS +Q L++ C+ F P +V A + + + +++D + P DVGL
Sbjct: 8 RPPATSTPSRVQALYELCKRTFPSPSSVAASSSPSSPPPDHAIGAISSLMDTITPVDVGL 67
Query: 358 SS------------EMAFFRNRDAAAEGTPTITHTTIYKSEKFSMVLFFLPTNAVIPLHN 501
E F +N A IT+ +Y+ + FS+ +F LPT+AVIPLH+
Sbjct: 68 RDDNLEDGRGFGFFESNFLKNSARVARWAQPITYLHVYECDAFSIGIFCLPTSAVIPLHD 127
Query: 502 HPGMTVFNKLLIGSMHATSYDWADPDDDPANESGASSADAQLRLAQLVVDDVFTAPCDTS 681
HPGMTV +KLL GSMH SYDW +P + ++L +L DDV APC T+
Sbjct: 128 HPGMTVLSKLLYGSMHVKSYDWVEP--------AVLANGKPVKLGKLHTDDVLNAPCPTA 179
Query: 682 VLFPTAGGNMHRFRAVAPSAFLDILGPPYSIEEDRDCTYYTDIPYSQHRMTGGEL--GGD 855
VL+P +GGNMH F +V A LD++ PPYS R CTY+ D P+S ++ G D
Sbjct: 180 VLYPQSGGNMHCFTSVKSCAVLDVIAPPYSESSGRVCTYFHDYPFSSFSAGQAKVVHGPD 239
Query: 856 EQEGRRLAWLKEVEMPRDLKMCSVRYGGPPI 948
AWL+ + +P ++ M Y GP I
Sbjct: 240 -----NYAWLEALIVPVNINMRPGTYTGPTI 265
9631.m04375|protein expressed protein
Length = 360
Score = 162 bits (407), Expect = 1e-39
Identities = 97/242 (40%), Positives = 137/242 (56%), Gaps = 17/242 (7%)
Frame = +1
Query: 223 RPSAIQRLFQACRAVFRGPGTVPAPAE---VALLRAMLDRMRPEDVGLSSEM-------- 369
R +A+QRL CR + G P V+ + A+L+ + P+D+ L + +
Sbjct: 108 RQNALQRLVDECRVLLDGSSKSTQPPNSTTVSRIVALLNGIGPDDLKLGTVLDTSEVTRA 167
Query: 370 AFFRNRDAAAEGTPTITHTTIYKSEKFSMVLFFLPTNAVIPLHNHPGMTVFNKLLIGSMH 549
A FR RD I +Y+ + F++ +F+LP V+PLH+HPGMTVF+KLL GS+H
Sbjct: 168 AAFRRRDPIQ----VIGGNYLYECDNFTVAVFYLPAGTVMPLHDHPGMTVFSKLLAGSVH 223
Query: 550 ATSYDWADPDDDPANESGASSA--DAQLRLAQLVVDDVFTAPCDTSVLFPTAGGNMHRFR 723
S+DW P SG A +L + V+D V A C T VL+P+ GGN+HRF
Sbjct: 224 VQSFDWVSPS---VYGSGGKRAVHSKNTKLVKKVLDHVVEAGCGTWVLYPSTGGNLHRFV 280
Query: 724 A--VAPSAFLDILGPPYSIEEDRDCTYYTDIPYSQHRMTGGELGGDEQEGRRLAWLKEV- 894
A P AFLD+L PPYS R CT+Y D P+ HR QE + AWL+ +
Sbjct: 281 AGVDGPCAFLDVLTPPYSEGRLRRCTFYRDYPFQLHRNHRFARNLSAQEKSQFAWLRPIN 340
Query: 895 -EMPRDLKMCSVRYGGPPI 948
P DL++ + Y GPP+
Sbjct: 341 ASAPPDLRIVPLTYSGPPV 359
9636.m03764|protein hypothetical protein
Length = 266
Score = 152 bits (379), Expect = 2e-36
Identities = 96/240 (40%), Positives = 128/240 (53%), Gaps = 19/240 (7%)
Frame = +1
Query: 229 SAIQRLFQACRAVFRGPGTV-PAPAEVALLRAMLDRMRPEDVGLSS-------------- 363
S +QRL+ AC +F P + P E+ L+ +LD M DVG+
Sbjct: 13 SKMQRLYDACDMIFSSPASAAPTIGEIRWLQHLLDGMEAADVGIDDGESPPSSSSSSCSS 72
Query: 364 ---EMAFFRNRDAAAEGTPTITHTTIYKSEKFSMVLFFLPTNAVIPLHNHPGMTVFNKLL 534
E++ R A IT+ I++ FSM +F P A +PLH+HP M V +KLL
Sbjct: 73 SDDEVSSKDGRLLPARAFTRITYMHIHQCADFSMGVFCFPAGATLPLHDHPEMVVLSKLL 132
Query: 535 IGSMHATSYDWADPDDDPANESGASSADAQLRLAQLVV-DDVFTAPCDTSVLFPTAGGNM 711
GS+ SYDW P + +SG LA++V D+V APC TSVLFP +GGNM
Sbjct: 133 YGSVRVKSYDWVTPPPPCSRKSG---------LARVVAADEVRHAPCKTSVLFPRSGGNM 183
Query: 712 HRFRAVAPSAFLDILGPPYSIEEDRDCTYYTDIPYSQHRMTGGELGGDEQEGRRLAWLKE 891
H F AV P A LD+L PPYS E R TY+ DIP L G A+L+E
Sbjct: 184 HAFTAVTPCAILDVLTPPYSEELGRPSTYFNDIPIP-------SLPG-------FAFLEE 229
Query: 892 VEMPRDLKMCSVRYGGPPI 948
++P D + Y GP +
Sbjct: 230 TDLPEDFSVAGAPYVGPEL 248
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101777763
Number of Sequences: 59712
Number of extensions: 3790070
Number of successful extensions: 121879
Number of sequences better than 1.0e-10: 24
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 121811
Number of HSP's gapped (non-prelim): 33
length of query: 458
length of database: 26,991,925
effective HSP length: 52
effective length of query: 405
effective length of database: 23,886,901
effective search space: 9674194905
effective search space used: 9674194905
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1747 Members:364 3pri:Y 1e-122
P37833 Aspartate aminotransferase, cytoplasmic
(Transaminase A) pir||JC5124 aspartate transaminase (EC 2.6.1.1), cyto
(1887 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9629.m05424|protein aspartate aminotransferase, cytoplasm... 787 0.0
9630.m05507|protein retrotransposon protein, putative, un... 462 e-130
9630.m01309|protein aspartate transaminase (EC 2.6.1.1) A... 412 e-115
9634.m03360|protein Similar to aspartate transaminase (EC... 338 2e-92
9629.m05424|protein aspartate aminotransferase, cytoplasmic (ec
2.6.1.1) (transaminase a). [rice
Length = 407
Score = 787 bits (2011), Expect = 0.0
Identities = 387/407 (95%), Positives = 398/407 (97%)
Frame = +2
Query: 245 MASPSVFAGIAQGPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQM 424
MAS SVFAG+AQ PEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQM
Sbjct: 1 MASSSVFAGLAQAPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQM 60
Query: 425 LIHNESRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFL 604
LI+N SRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFL
Sbjct: 61 LINNPSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFL 120
Query: 605 ARHYHERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGFLEDLSSAPSGAI 784
ARHYHERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQG LEDL SAPSGAI
Sbjct: 121 ARHYHERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGLLEDLGSAPSGAI 180
Query: 785 VLLHACAHNPTGVDPTLEQWEQIRQLMRSKALLPFFDSAYQGFASGSLDKDAQSVRMFVA 964
VLLHACAHNPTGVDPTL+QWEQIRQLMRSKALLPFFDSAYQGFASGSLD+DAQSVRMFVA
Sbjct: 181 VLLHACAHNPTGVDPTLDQWEQIRQLMRSKALLPFFDSAYQGFASGSLDQDAQSVRMFVA 240
Query: 965 DGGELLMAQSYAKNMGLYGERVGALSIVCGSADIAVKVESQLKLVIRPMYSNPPLHGASI 1144
DGGELLMAQSYAKNMGLYGERVGALSIVCGSAD+AV+VESQLKLVIRPMYSNPP+HGASI
Sbjct: 241 DGGELLMAQSYAKNMGLYGERVGALSIVCGSADVAVRVESQLKLVIRPMYSNPPIHGASI 300
Query: 1145 VATILKDSGMFDEWTLELKAMADRIISMREQLFDALKVRETPGDWSHIIKQIGMFTFTGL 1324
VATILKDS MF+EWT+ELK MADRIISMR+QLFDALK RETPGDWSHIIKQIGMFTFTGL
Sbjct: 301 VATILKDSAMFNEWTVELKGMADRIISMRQQLFDALKTRETPGDWSHIIKQIGMFTFTGL 360
Query: 1325 NSDQVAFMRQEYHIYMTSDGRISMAGLSSRTVPHLADAIHAAVTKLK 1465
NSDQVAFMRQEYHIYMTSDGRISMAGLS RT+PHLADAIHAAVTKLK
Sbjct: 361 NSDQVAFMRQEYHIYMTSDGRISMAGLSGRTIPHLADAIHAAVTKLK 407
9630.m05507|protein retrotransposon protein, putative, unclassified
Length = 1854
Score = 462 bits (1176), Expect = e-130
Identities = 220/395 (55%), Positives = 295/395 (73%), Gaps = 1/395 (0%)
Frame = +2
Query: 257 SVFAGIAQGPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQMLIHN 436
S F G+ P DPILGV+ A+ D + +K+NLGVGAYRTEE +P VLNVV++AE +++
Sbjct: 178 SRFEGVPMAPPDPILGVSEAFKADQNDLKLNLGVGAYRTEELQPYVLNVVKKAETLMLEK 237
Query: 437 ESRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHY 616
KEYLPI GLA FNK +A+L+FGAD+P +++ RVAT+Q LSGTGSLR+ F+ R++
Sbjct: 238 GEN-KEYLPIEGLAAFNKATAELLFGADNPVLKQGRVATLQSLSGTGSLRLAAAFIQRYF 296
Query: 617 HERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGFLEDLSSAPSGAIVLLH 796
E + I PTWGNH +F A + YRYYDP T GLDF+G + D+ +AP G+ VLLH
Sbjct: 297 PEAKVLISSPTWGNHKNIFNDAKVPWSEYRYYDPKTVGLDFEGMIADIQAAPDGSFVLLH 356
Query: 797 ACAHNPTGVDPTLEQWEQIRQLMRSKALLPFFDSAYQGFASGSLDKDAQSVRMFVADGGE 976
CAHNPTG+DPT EQWE+I +++ K +PFFD AYQGFASGSLD+DA SVR+FV G E
Sbjct: 357 GCAHNPTGIDPTPEQWEKIADVIQEKKHMPFFDVAYQGFASGSLDEDASSVRLFVQRGLE 416
Query: 977 LLMAQSYAKNMGLYGERVGALSIVCGSADIAVKVESQLKLVIRPMYSNPPLHGASIVATI 1156
+ +AQSY+KN+GLY ER+GA+++VC + ++A +V+SQLK + RPMYSNPP+HGA IVA +
Sbjct: 417 VFVAQSYSKNLGLYAERIGAINVVCSTPEVANRVKSQLKRLARPMYSNPPIHGARIVANV 476
Query: 1157 LKDSGMFDEWTLELKAMADRIISMREQLFDALKVRETPG-DWSHIIKQIGMFTFTGLNSD 1333
+ D MF EW E++ MA RI ++R++L+D+L ++ G DWS I++QIGMF++TGLN
Sbjct: 477 VGDPTMFGEWKQEMEEMAGRIKNVRQKLYDSLSAKDDSGKDWSFILRQIGMFSYTGLNKT 536
Query: 1334 QVAFMRQEYHIYMTSDGRISMAGLSSRTVPHLADAI 1441
Q M ++HIYMT DGRIS+AGLS +LADAI
Sbjct: 537 QSDNMTDKWHIYMTKDGRISLAGLSLAKCEYLADAI 572
9630.m01309|protein aspartate transaminase (EC 2.6.1.1) AAT3
precursor - proso millet
Length = 432
Score = 412 bits (1048), Expect = e-115
Identities = 209/408 (51%), Positives = 276/408 (67%)
Frame = +2
Query: 242 TMASPSVFAGIAQGPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQ 421
T A S+F + +DPILGVT A+ DPSP KVN+GVGAYR + GKP+VL VR AE+
Sbjct: 28 TRAMASLFGHVEPASKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAER 87
Query: 422 MLIHNESRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEF 601
+ N + EYLP+ G + S KL +G DS I++ R+A VQ LSGTG+ R+ +F
Sbjct: 88 RIAGNLNM--EYLPMGGSIKMIEESLKLAYGEDSDFIKDKRIAAVQALSGTGACRLFADF 145
Query: 602 LARHYHERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGFLEDLSSAPSGA 781
R IYIP PTW NH ++ A + R++ YY P +RGLDF G ++D+ +AP+G+
Sbjct: 146 QRRFLPNSQIYIPTPTWSNHHNIWRDAQVPQRTFTYYHPESRGLDFAGLMDDIKNAPNGS 205
Query: 782 IVLLHACAHNPTGVDPTLEQWEQIRQLMRSKALLPFFDSAYQGFASGSLDKDAQSVRMFV 961
LLHACAHNPTGVDPT EQW +I + K PFFD AYQGFASG ++DA+++R+F+
Sbjct: 206 FFLLHACAHNPTGVDPTEEQWREISYQFKIKNHFPFFDMAYQGFASGDPERDAKAIRIFL 265
Query: 962 ADGGELLMAQSYAKNMGLYGERVGALSIVCGSADIAVKVESQLKLVIRPMYSNPPLHGAS 1141
DG ++ AQSYAKNMGLYG+R G LSI+C AV V+SQL+ + RPMYSNPP+HGA
Sbjct: 266 EDGHQIGCAQSYAKNMGLYGQRAGCLSILCEDEMQAVSVKSQLQQIARPMYSNPPVHGAL 325
Query: 1142 IVATILKDSGMFDEWTLELKAMADRIISMREQLFDALKVRETPGDWSHIIKQIGMFTFTG 1321
+V+ IL D + W E+K MADRII MR+ L + L+ +P W HI QIGMF ++G
Sbjct: 326 VVSIILNDPELKSLWLKEVKGMADRIIGMRKALRENLEGLGSPLSWDHITNQIGMFCYSG 385
Query: 1322 LNSDQVAFMRQEYHIYMTSDGRISMAGLSSRTVPHLADAIHAAVTKLK 1465
+ +QV + EYHIYMT +GRISMAG+++ V +LA+AIH VTK K
Sbjct: 386 MTPEQVDRLTNEYHIYMTRNGRISMAGVTTGNVAYLANAIH-EVTKTK 432
9634.m03360|protein Similar to aspartate transaminase (EC 2.6.1.1)
precursor, mitochondrial - rice
Length = 333
Score = 338 bits (858), Expect = 2e-92
Identities = 165/324 (50%), Positives = 224/324 (68%)
Frame = +2
Query: 494 SAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHYHERTIYIPQPTWGNHPKVF 673
S KL +G + I++ R+A VQ LSGTG+ R+ +F R + IYIP PTW NH ++
Sbjct: 11 SLKLAYGENCEFIKDKRIAAVQALSGTGACRLFADFQKRFLPDSQIYIPTPTWANHHNIW 70
Query: 674 TLAGLTVRSYRYYDPATRGLDFQGFLEDLSSAPSGAIVLLHACAHNPTGVDPTLEQWEQI 853
A + +++ YY P +RGLDF G ++D+ +AP G+ LLHACAHNPTGVDP+ EQW +I
Sbjct: 71 RDAQVPQKTFTYYHPESRGLDFAGLMDDIKNAPDGSFFLLHACAHNPTGVDPSEEQWREI 130
Query: 854 RQLMRSKALLPFFDSAYQGFASGSLDKDAQSVRMFVADGGELLMAQSYAKNMGLYGERVG 1033
+ K PFFD AYQGFASG ++DA+++R+F+ DG ++ AQSYAKNMGLYG+R G
Sbjct: 131 SHQFKVKKHFPFFDMAYQGFASGDPERDAKAIRIFLEDGHQIGCAQSYAKNMGLYGQRAG 190
Query: 1034 ALSIVCGSADIAVKVESQLKLVIRPMYSNPPLHGASIVATILKDSGMFDEWTLELKAMAD 1213
LSI+C AV V+SQL+ + RP+YSNPP+HGA IV+TIL D + W E+K MAD
Sbjct: 191 CLSILCDDEMQAVAVKSQLQQIARPLYSNPPVHGALIVSTILGDPELKSLWLKEVKGMAD 250
Query: 1214 RIISMREQLFDALKVRETPGDWSHIIKQIGMFTFTGLNSDQVAFMRQEYHIYMTSDGRIS 1393
RII MR L + L+ +P W HI QIGMF ++G+ +QV + +E+HIYMT +GRIS
Sbjct: 251 RIIGMRTALKENLEKLGSPMSWEHITNQIGMFCYSGMTPEQVDRLTKEFHIYMTRNGRIS 310
Query: 1394 MAGLSSRTVPHLADAIHAAVTKLK 1465
MAG+++ V +LA+AIH VTK K
Sbjct: 311 MAGVTTGNVAYLANAIH-EVTKTK 333
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115762538
Number of Sequences: 59712
Number of extensions: 3329783
Number of successful extensions: 35494
Number of sequences better than 1.0e-10: 8
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35486
Number of HSP's gapped (non-prelim): 5
length of query: 629
length of database: 26,991,925
effective HSP length: 53
effective length of query: 575
effective length of database: 23,827,189
effective search space: 13700633675
effective search space used: 13700633675
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 161 (67.1 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1791 Members:262 3pri:Y 1e-128
P32112 Adenosylhomocysteinase (S-adenosyl-L-homocysteine
hydrolase) (AdoHcyase)
(1804 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9639.m02398|protein adenosylhomocysteinase 789 0.0
9639.m02397|protein adenosylhomocysteinase 789 0.0
9639.m04036|protein transposon protein, putative, CACTA, ... 96 2e-19
9629.m00112|protein transposon protein, putative, CACTA, ... 92 4e-18
9629.m00111|protein transposon protein, putative, CACTA, ... 92 4e-18
9636.m00525|protein dna-directed rna polymerase ii larges... 90 8e-18
9630.m00367|protein transposon protein, putative, CACTA, ... 89 3e-17
9631.m03557|protein putative protein kinase 89 3e-17
9638.m00204|protein transposon protein, putative, CACTA, ... 88 5e-17
9635.m04045|protein transposon protein, putative, CACTA, ... 82 3e-15
9629.m05120|protein retrotransposon protein, putative, Ty... 81 7e-15
9640.m04219|protein retrotransposon protein, putative, Ty... 80 9e-15
9636.m00068|protein transposon protein, putative, CACTA, ... 80 2e-14
9633.m03752|protein retrotransposon protein, putative, un... 78 5e-14
9638.m02460|protein retrotransposon protein, putative, un... 78 5e-14
9633.m00504|protein dna-directed rna polymerase ii larges... 78 6e-14
9629.m00108|protein transposon protein, putative, CACTA, ... 78 6e-14
9629.m00408|protein expressed protein 78 6e-14
9632.m03436|protein transposon protein, putative, CACTA, ... 78 6e-14
9629.m02170|protein transposon protein, putative, CACTA, ... 78 6e-14
9639.m02398|protein adenosylhomocysteinase
Length = 433
Score = 789 bits (2015), Expect = 0.0
Identities = 390/431 (90%), Positives = 399/431 (92%), Gaps = 1/431 (0%)
Frame = +2
Query: 176 MPGLMACRTEFGPSQPFKGARISGSLHMTIQTAVLIETLTALGAEVRWCSC-NIFSTQDH 352
MPGLMACR EFGPSQPFKGARISGSLH TIQ AVLIETLTALG ++
Sbjct: 1 MPGLMACRAEFGPSQPFKGARISGSLHRTIQAAVLIETLTALGRRGPLVLLQHLLHAGPR 60
Query: 353 AAAAIARDSAAVFAWKGETLEEYWWCTERCLDWGAGGGPDLIVDDGGDATLLIHEGVKAE 532
RDSAAVFAWKGETLEEYWWCTERCLDWG G GPDLIVDDGGDATLLIHEGVKAE
Sbjct: 61 RRPPSPRDSAAVFAWKGETLEEYWWCTERCLDWGVGAGPDLIVDDGGDATLLIHEGVKAE 120
Query: 533 EEFEKSGKVPDPESTDNPEFKIVLTIIRDGLKTDASKYRKMKERLVGVSEETTTGVKRLY 712
EEFEKSGKVPDPESTDN EFKIVLTIIRDGLK+D SKYRKMKERLVGVSEETTTGVKRLY
Sbjct: 121 EEFEKSGKVPDPESTDNAEFKIVLTIIRDGLKSDPSKYRKMKERLVGVSEETTTGVKRLY 180
Query: 713 QMQESGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVG 892
QMQE+G LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVG
Sbjct: 181 QMQETGALLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVG 240
Query: 893 KGCAAALKQAGARVIVTEIDPICALQALMEGIQILTLEDVVSEADIFVTTTGNKDIIMVD 1072
KGCAAALKQAGARVIVTEIDPICALQALMEG+Q+LTLEDVVSEADIFVTTTGNKDIIMVD
Sbjct: 241 KGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVD 300
Query: 1073 HMRKMKNNAIVCNIGHFDNEIDMNGLETYPGVKRITIKPQTDRWVFPETKTGIIVLAEGR 1252
HMRKMKNNAIVCNIGHFDNEIDM GLETYPGVKRITIKPQTDRWVFPET TGIIVLAEGR
Sbjct: 301 HMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNTGIIVLAEGR 360
Query: 1253 LMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYVLPKHLDEKVAALHLGK 1432
LMNLGCATGHPSFVMSCSFTNQVIAQLELW EK++GKYEKKVYVLPKHLDEKVA LHLGK
Sbjct: 361 LMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVACLHLGK 420
Query: 1433 LGARLTKLTKSQ 1468
LGARLTKL+KSQ
Sbjct: 421 LGARLTKLSKSQ 432
9639.m02397|protein adenosylhomocysteinase
Length = 433
Score = 789 bits (2015), Expect = 0.0
Identities = 390/431 (90%), Positives = 399/431 (92%), Gaps = 1/431 (0%)
Frame = +2
Query: 176 MPGLMACRTEFGPSQPFKGARISGSLHMTIQTAVLIETLTALGAEVRWCSC-NIFSTQDH 352
MPGLMACR EFGPSQPFKGARISGSLH TIQ AVLIETLTALG ++
Sbjct: 1 MPGLMACRAEFGPSQPFKGARISGSLHRTIQAAVLIETLTALGRRGPLVLLQHLLHAGPR 60
Query: 353 AAAAIARDSAAVFAWKGETLEEYWWCTERCLDWGAGGGPDLIVDDGGDATLLIHEGVKAE 532
RDSAAVFAWKGETLEEYWWCTERCLDWG G GPDLIVDDGGDATLLIHEGVKAE
Sbjct: 61 RRPPSPRDSAAVFAWKGETLEEYWWCTERCLDWGVGAGPDLIVDDGGDATLLIHEGVKAE 120
Query: 533 EEFEKSGKVPDPESTDNPEFKIVLTIIRDGLKTDASKYRKMKERLVGVSEETTTGVKRLY 712
EEFEKSGKVPDPESTDN EFKIVLTIIRDGLK+D SKYRKMKERLVGVSEETTTGVKRLY
Sbjct: 121 EEFEKSGKVPDPESTDNAEFKIVLTIIRDGLKSDPSKYRKMKERLVGVSEETTTGVKRLY 180
Query: 713 QMQESGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVG 892
QMQE+G LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVG
Sbjct: 181 QMQETGALLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVG 240
Query: 893 KGCAAALKQAGARVIVTEIDPICALQALMEGIQILTLEDVVSEADIFVTTTGNKDIIMVD 1072
KGCAAALKQAGARVIVTEIDPICALQALMEG+Q+LTLEDVVSEADIFVTTTGNKDIIMVD
Sbjct: 241 KGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVD 300
Query: 1073 HMRKMKNNAIVCNIGHFDNEIDMNGLETYPGVKRITIKPQTDRWVFPETKTGIIVLAEGR 1252
HMRKMKNNAIVCNIGHFDNEIDM GLETYPGVKRITIKPQTDRWVFPET TGIIVLAEGR
Sbjct: 301 HMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNTGIIVLAEGR 360
Query: 1253 LMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYVLPKHLDEKVAALHLGK 1432
LMNLGCATGHPSFVMSCSFTNQVIAQLELW EK++GKYEKKVYVLPKHLDEKVA LHLGK
Sbjct: 361 LMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVACLHLGK 420
Query: 1433 LGARLTKLTKSQ 1468
LGARLTKL+KSQ
Sbjct: 421 LGARLTKLSKSQ 432
9639.m04036|protein transposon protein, putative, CACTA, En/Spm
sub-class
Length = 946
Score = 95.6 bits (234), Expect = 2e-19
Identities = 89/262 (33%), Positives = 121/262 (45%), Gaps = 57/262 (21%)
Frame = +3
Query: 6 TPPSLPITLLPPPPDPIHQPSPWRSPWRRPRLAGSTRSRTSPRPTSAASSSSWPRSRCPA 185
+PP+ + PPP H PSP +S + S+ SP PT + S P+S PA
Sbjct: 555 SPPTPTASHSPPPVPEGHTPSPPKSGPPAGESPPTPESKASPPPTPEEYTPSPPKSTPPA 614
Query: 186 --SWPAAPSSAPRSPSRAPGSPAPST*LSRPPCSSRPSPPSAPRSAGAPATS-----SPP 344
S P S A P AP PS S PP P P + S P T SPP
Sbjct: 615 EKSPPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPLTPESKASCPPPPTPEGHTPSPP 674
Query: 345 RTTPP----------------PPSPATRPPSSPGRARPSRSTGGAPSAASTGAPAAAPT- 473
++TPP PP+P PS P P + P + ++ P AP
Sbjct: 675 KSTPPTEKSPHTPESESSSPPPPAPEGHMPSPPKSTPPVEKSPPTPESEASSPPPPAPEG 734
Query: 474 --------------------SSSTTAATPR--CSSTRASRPRRSSRSPARSPTRSPPTTP 587
+S T+ TP S S P P SP +SPP+
Sbjct: 735 HTPSPPKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPPEEKSPPPHSPEKSPPS-- 792
Query: 588 SSRSSSPSSATASRPTPASTAR*RRGSSVSPRR---PPPASRGS----TRCRSPAP---- 734
+ +SP + S PTPA S +P + PP G+ + SP P
Sbjct: 793 EAHPTSPPPSEKSPPTPA-----EESSPPTPEKSPSPPSGHEGTPPSPVKSSSPPPEAHV 847
Query: 735 SFSPPSTSTTPSPRASLTT 791
S PP S++P P A +++
Sbjct: 848 SSPPPEKSSSPPPEAHVSS 866
Score = 94.8 bits (232), Expect = 4e-19
Identities = 89/257 (34%), Positives = 112/257 (42%), Gaps = 25/257 (9%)
Frame = +3
Query: 3 ATPPS--LPIT-----LLPPPPDPI-HQPSPWRS--PWRRPRLAGSTRSRTSPRPTSAAS 152
+TPPS P+T PPPP P H PSP +S P + + S + P P
Sbjct: 643 STPPSEKSPLTPESKASCPPPPTPEGHTPSPPKSTPPTEKSPHTPESESSSPPPPAPEGH 702
Query: 153 SSSWPRSRCPA--SWPAAPSSAPRSPSRAPGSPAPST*LSRPPCSSRP--------SPPS 302
S P+S P S P S A P AP PS S PP P SPP+
Sbjct: 703 MPSPPKSTPPVEKSPPTPESEASSPPPPAPEGHTPSPPKSSPPEEKSPPIPPTSHTSPPT 762
Query: 303 APRSAGAPATSSPPRT-TPPPPSPATRPPSSPGRARPSRSTGGAPSAASTGAPAAAPTSS 479
+P SSPP +PPP SP PPS P S P+ A +P PT
Sbjct: 763 PEEYTPSPPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSP---PTPE 819
Query: 480 STTAATPRCSSTRASRPRRSSRSPARSPTRSPPTTPSSRSSSPSSATASRPTPASTA--- 650
+ + T S P +SS P + SPP P SS P A S P P +
Sbjct: 820 KSPSPPSGHEGTPPS-PVKSSSPPPEAHVSSPP--PEKSSSPPPEAHVSSPPPPEKSPPP 876
Query: 651 -R*RRGSSVSPRRPPPASRGSTRCRSPAPSFSPPSTSTTPSP 773
+ +++P PP S +P S SPPS + P P
Sbjct: 877 PETKSPPTLTPEISPPPEGKSPPSHTPESS-SPPSKESEPPP 917
Score = 93.6 bits (229), Expect = 1e-18
Identities = 83/258 (32%), Positives = 111/258 (42%), Gaps = 20/258 (7%)
Frame = +3
Query: 36 PPPPDPI-HQPSPWRS--PWRRPRLAGSTRSRTSPRPTSAASSSSWPRSRCPASWPAAPS 206
PPPP P H PSP S P + L +++ P PT + S P+S P
Sbjct: 628 PPPPAPEGHTPSPPESTPPSEKSPLTPESKASCPPPPTPEGHTPSPPKSTPPTE---KSP 684
Query: 207 SAPRSPSRAPGSPAPST*LSRPPCSSRP---SPPSAPRSAGAPA-------TSSPPRTTP 356
P S S +P PAP + PP S+ P SPP+ A +P T SPP+++P
Sbjct: 685 HTPESESSSPPPPAPEGHMPSPPKSTPPVEKSPPTPESEASSPPPPAPEGHTPSPPKSSP 744
Query: 357 P-------PPSPATRPPSSPGRARPSRSTGGAPSAASTGAPAAAPTSSSTTAATPRCSST 515
P PP+ T PP+ P PS P S P +P S + A P
Sbjct: 745 PEEKSPPIPPTSHTSPPT-PEEYTPSPPKSSPPEEKSP--PPHSPEKSPPSEAHP----- 796
Query: 516 RASRPRRSSRSPARSPTRSPPTTPSSRSSSPSSATASRPTPASTAR*RRGSSVSPRRPPP 695
+ P S +SP S P TP S PS + P+P ++ + VS PPP
Sbjct: 797 --TSPPPSEKSPPTPAEESSPPTPEKSPSPPSGHEGTPPSPVKSSSPPPEAHVSS--PPP 852
Query: 696 ASRGSTRCRSPAPSFSPPSTSTTPSPRASLTTFTVAVT 809
S + S PP S P S T T ++
Sbjct: 853 EKSSSPPPEAHVSSPPPPEKSPPPPETKSPPTLTPEIS 890
Score = 89.7 bits (219), Expect = 1e-17
Identities = 72/253 (28%), Positives = 106/253 (41%), Gaps = 16/253 (6%)
Frame = +3
Query: 9 PPSLPITLLPPPPDPIHQPSPWRSPWRRPRLAGSTRSRTSPRPTSAASSSSWPRSRCPAS 188
PP +P+ + PP P ++ P A ST + P P S P P+
Sbjct: 429 PPLIPVPVGPPEKSPAYEEPP---------AAPSTPTSHGPPPPEEESPEEPPEEPTPSP 479
Query: 189 WPAAPSS-APRSPSRAP---GSPAPST*LSRPPCSSRPSPPSAPRSAGAPATSSPPRTTP 356
P++P S A +P AP G +P PP S P +P AP + P T
Sbjct: 480 TPSSPESPAKMAPPPAPAIKGVTSPPAEYGAPPPPSSGWLPKSPERKKAPPPQAEPPTEY 539
Query: 357 PPPSPATRPPSSPGRARPSRSTGGAPSAASTGAPAAAPTSSSTTAATPRCSSTRAS---R 527
PP+ P G++ P+ + +P G + P S +P ++AS
Sbjct: 540 SPPATPESSPPPEGKSPPTPTASHSPPPVPEGHTPSPPKSGPPAGESPPTPESKASPPPT 599
Query: 528 PRRSSRSPARS--PTRSPPTTPSSRSSS--PSSATASRPTPASTAR*RRGSSVSPRR--- 686
P + SP +S P P TP S++SS P + P+P + S ++P
Sbjct: 600 PEEYTPSPPKSTPPAEKSPPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPLTPESKAS 659
Query: 687 --PPPASRGSTRCRSPAPSFSPPSTSTTP 767
PPP G T P+P S P T +P
Sbjct: 660 CPPPPTPEGHT----PSPPKSTPPTEKSP 684
Score = 85.4 bits (208), Expect = 3e-16
Identities = 90/260 (34%), Positives = 122/260 (46%), Gaps = 52/260 (20%)
Frame = +3
Query: 12 PSLPITLLPPPPDPIHQPSPWRSPWRRPRLAG-STRSRTSPRPTSAASSSSWPRSRCPAS 188
PS P + PPPP+ P P P + + ++ +P P A + P + A
Sbjct: 452 PSTPTSHGPPPPEEESPEEPPEEPTPSPTPSSPESPAKMAPPPAPAIKGVTSPPAEYGAP 511
Query: 189 WPAAPSSAPRSPSRAPGSPA---PST*LSRPPCSSRPSPPSAPRSAGAPATS-------- 335
P + P+SP R P P T S PP + SPP +S P S
Sbjct: 512 PPPSSGWLPKSPERKKAPPPQAEPPTEYS-PPATPESSPPPEGKSPPTPTASHSPPPVPE 570
Query: 336 ----SPPRTTPP----PPSP--ATRPPSSPGRARPS--RSTGGA--------------PS 437
SPP++ PP PP+P PP +P PS +ST A P
Sbjct: 571 GHTPSPPKSGPPAGESPPTPESKASPPPTPEEYTPSPPKSTPPAEKSPPTPESKASSPPP 630
Query: 438 AASTGAPAAAPTSSSTTAATPRCSSTRAS-----RPRRSSRSPARS--PTRSPPTTPSSR 596
A G + P S+ + +P ++AS P + SP +S PT P TP S
Sbjct: 631 PAPEGHTPSPPESTPPSEKSPLTPESKASCPPPPTPEGHTPSPPKSTPPTEKSPHTPESE 690
Query: 597 SSS--PSSATASRPTPASTAR*RRGSSVSPRR-----PPPASRGSTRCRSPAPSFSPPST 755
SSS P + P+P + S +P PPPA G T SP P SPP
Sbjct: 691 SSSPPPPAPEGHMPSPPKSTPPVEKSPPTPESEASSPPPPAPEGHT--PSP-PKSSPPEE 747
Query: 756 STTPSPRASLTT 791
+ P P S T+
Sbjct: 748 KSPPIPPTSHTS 759
Score = 74.5 bits (180), Expect = 5e-13
Identities = 71/200 (35%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Frame = +3
Query: 36 PPPPDPI-HQPSPWRS-PWRRPRLAGSTRSRTSPRPTSAASSSSWPRSRCPASWPAAPSS 209
PPPP P H PSP +S P S TSP PT + S P+S S P S
Sbjct: 727 PPPPAPEGHTPSPPKSSPPEEKSPPIPPTSHTSP-PTPEEYTPSPPKS----SPPEEKSP 781
Query: 210 APRSPSRAPGSPAPST*LSRPPCSSRPSPPSAPRSAGAPATS-SPP---RTTPPPPSPAT 377
P SP ++P S A T S PP P P+ S P S SPP TPP P ++
Sbjct: 782 PPHSPEKSPPSEAHPT--SPPPSEKSPPTPAEESSPPTPEKSPSPPSGHEGTPPSPVKSS 839
Query: 378 RPP-----SSPGRARPSRSTGGAPSAASTGAPAAAPTSSSTTAATPRCSSTRASRPRRSS 542
PP SSP P +S+ P A + P + +P + S P
Sbjct: 840 SPPPEAHVSSPP---PEKSSSPPPEAHVSSPPPPEKSPPPPETKSPPTLTPEISPPPEGK 896
Query: 543 RSPARSPTRS--------PPTTPSSRSSSPSSATASRPT 635
P+ +P S PP TP+ +SS PS PT
Sbjct: 897 SPPSHTPESSSPPSKESEPPPTPTPKSSPPSHEEREVPT 935
9629.m00112|protein transposon protein, putative, CACTA, En/Spm
sub-class
Length = 580
Score = 91.7 bits (224), Expect = 4e-18
Identities = 83/238 (34%), Positives = 111/238 (45%), Gaps = 16/238 (6%)
Frame = +3
Query: 66 SPWRSPWRR-PRLAGSTRSRTSPRP-TSAASSSSWPRSRCPASWPAAPSSA--PRSPSRA 233
SP SP P A + S +P P T ++ + P PA+ P PS+A P P
Sbjct: 4 SPSPSPGTATPATAAAAPSTATPTPATQPNATPADPSITPPAASPPLPSAATPPPQPDSP 63
Query: 234 PGSPAPST*LSRPPCSSRPSPPSAPRSAGAPATS------SPPRTTPPPPSPATRPPSSP 395
P SP P+ ++ PP ++ P PP P ++ P S SPP + P PP+PAT PP
Sbjct: 64 PPSPPPAPPVAVPPPATVP-PPPVPVASPPPTPSATLPPPSPPASVPVPPTPATTPPKPS 122
Query: 396 GRARPSRSTGGAPSAASTGAPAAAPTSSSTTAATPRCSSTRASRPRRSSRSP-----ARS 560
+P + PS+ + P P S TP + RRS R+P A S
Sbjct: 123 PVQQPPVAASPPPSSPADLPPPNPPARSD----TPPVVQSPPPPHRRSPRTPWAPPMAPS 178
Query: 561 PTRSPPTTPSSRSSSPSSATASRPTPASTAR*RRGSSVSPRRPPPASRGSTRCRSP-APS 737
P+ S PT PS S SP + PTP + + SP P A T +P AP
Sbjct: 179 PSGS-PTKPSPASPSPIAGDPIIPTPNNPS--------SPLATPSAPGSGTPVVTPSAPV 229
Query: 738 FSPPSTSTTPSPRA 779
PPS T P+ A
Sbjct: 230 SGPPSPGTAPATAA 243
Score = 84.7 bits (206), Expect = 5e-16
Identities = 70/226 (30%), Positives = 93/226 (40%), Gaps = 4/226 (1%)
Frame = +3
Query: 3 ATPPSLPITLLPPP-PDPIHQPSPWRSPWRRPRLAGSTRSRTSPRPTSAASSSSWPRSRC 179
A P LP PPP PD SP SP P +A + P P AS P +
Sbjct: 45 AASPPLPSAATPPPQPD-----SPPPSPPPAPPVAVPPPATVPPPPVPVASPPPTPSATL 99
Query: 180 PASWPAAPSSAPRSPSRAPGSPAPST*LSRPPCSSRPSPPSAPRS---AGAPATSSPPRT 350
P P A P +P+ P P+P + +PP ++ P PPS+P PA S P
Sbjct: 100 PPPSPPASVPVPPTPATTPPKPSP---VQQPPVAASP-PPSSPADLPPPNPPARSDTPPV 155
Query: 351 TPPPPSPATRPPSSPGRARPSRSTGGAPSAASTGAPAAAPTSSSTTAATPRCSSTRASRP 530
PP P R P +P + S G+P+ S +P +P + TP S
Sbjct: 156 VQSPPPPHRRSPRTPWAPPMAPSPSGSPTKPSPASP--SPIAGDPIIPTPNNPS------ 207
Query: 531 RRSSRSPARSPTRSPPTTPSSRSSSPSSATASRPTPASTAR*RRGSSVSP 680
SP +P+ TP S+P S S T +TA R S+SP
Sbjct: 208 -----SPLATPSAPGSGTPVVTPSAPVSGPPSPGTAPATAADRSNKSLSP 252
Score = 72.6 bits (175), Expect = 2e-12
Identities = 70/205 (34%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Frame = +3
Query: 9 PPSLPITL-----LPPPPDPIHQPSPWRSPWRRPRLAGSTRSRTSPRPTSAASSSSWPRS 173
PP+ P+ + +PPPP P+ P P T S T P P+ AS P
Sbjct: 68 PPAPPVAVPPPATVPPPPVPVASPPP-------------TPSATLPPPSPPASV---PVP 111
Query: 174 RCPASWPAAPSSAPRSP---SRAPGSPA------PST*LSRPPCSSRPSPP--SAPRSAG 320
PA+ P PS + P S P SPA P PP P PP +PR+
Sbjct: 112 PTPATTPPKPSPVQQPPVAASPPPSSPADLPPPNPPARSDTPPVVQSPPPPHRRSPRTPW 171
Query: 321 AP-----ATSSPPRTTPPPPSPATRPPSSPGRARPSRSTGGAPSAASTGAPAAAPTSSST 485
AP + SP + +P PSP P P PS S PSA +G P P S+
Sbjct: 172 APPMAPSPSGSPTKPSPASPSPIAGDPIIPTPNNPS-SPLATPSAPGSGTPVVTP--SAP 228
Query: 486 TAATPRCSSTRASRPRRSSRSPARSPTRSPPTTPSSRSSSPSSATA 623
+ P + A+ RS++S SP + SS SSA A
Sbjct: 229 VSGPPSPGTAPATAADRSNKS--LSPNTQDGSVSSSDGGMSSSAKA 272
9629.m00111|protein transposon protein, putative, CACTA, En/Spm
sub-class
Length = 698
Score = 91.7 bits (224), Expect = 4e-18
Identities = 83/238 (34%), Positives = 111/238 (45%), Gaps = 16/238 (6%)
Frame = +3
Query: 66 SPWRSPWRR-PRLAGSTRSRTSPRP-TSAASSSSWPRSRCPASWPAAPSSA--PRSPSRA 233
SP SP P A + S +P P T ++ + P PA+ P PS+A P P
Sbjct: 4 SPSPSPGTATPATAAAAPSTATPTPATQPNATPADPSITPPAASPPLPSAATPPPQPDSP 63
Query: 234 PGSPAPST*LSRPPCSSRPSPPSAPRSAGAPATS------SPPRTTPPPPSPATRPPSSP 395
P SP P+ ++ PP ++ P PP P ++ P S SPP + P PP+PAT PP
Sbjct: 64 PPSPPPAPPVAVPPPATVP-PPPVPVASPPPTPSATLPPPSPPASVPVPPTPATTPPKPS 122
Query: 396 GRARPSRSTGGAPSAASTGAPAAAPTSSSTTAATPRCSSTRASRPRRSSRSP-----ARS 560
+P + PS+ + P P S TP + RRS R+P A S
Sbjct: 123 PVQQPPVAASPPPSSPADLPPPNPPARSD----TPPVVQSPPPPHRRSPRTPWAPPMAPS 178
Query: 561 PTRSPPTTPSSRSSSPSSATASRPTPASTAR*RRGSSVSPRRPPPASRGSTRCRSP-APS 737
P+ S PT PS S SP + PTP + + SP P A T +P AP
Sbjct: 179 PSGS-PTKPSPASPSPIAGDPIIPTPNNPS--------SPLATPSAPGSGTPVVTPSAPV 229
Query: 738 FSPPSTSTTPSPRA 779
PPS T P+ A
Sbjct: 230 SGPPSPGTAPATAA 243
Score = 84.7 bits (206), Expect = 5e-16
Identities = 70/226 (30%), Positives = 93/226 (40%), Gaps = 4/226 (1%)
Frame = +3
Query: 3 ATPPSLPITLLPPP-PDPIHQPSPWRSPWRRPRLAGSTRSRTSPRPTSAASSSSWPRSRC 179
A P LP PPP PD SP SP P +A + P P AS P +
Sbjct: 45 AASPPLPSAATPPPQPD-----SPPPSPPPAPPVAVPPPATVPPPPVPVASPPPTPSATL 99
Query: 180 PASWPAAPSSAPRSPSRAPGSPAPST*LSRPPCSSRPSPPSAPRS---AGAPATSSPPRT 350
P P A P +P+ P P+P + +PP ++ P PPS+P PA S P
Sbjct: 100 PPPSPPASVPVPPTPATTPPKPSP---VQQPPVAASP-PPSSPADLPPPNPPARSDTPPV 155
Query: 351 TPPPPSPATRPPSSPGRARPSRSTGGAPSAASTGAPAAAPTSSSTTAATPRCSSTRASRP 530
PP P R P +P + S G+P+ S +P +P + TP S
Sbjct: 156 VQSPPPPHRRSPRTPWAPPMAPSPSGSPTKPSPASP--SPIAGDPIIPTPNNPS------ 207
Query: 531 RRSSRSPARSPTRSPPTTPSSRSSSPSSATASRPTPASTAR*RRGSSVSP 680
SP +P+ TP S+P S S T +TA R S+SP
Sbjct: 208 -----SPLATPSAPGSGTPVVTPSAPVSGPPSPGTAPATAADRSNKSLSP 252
Score = 72.6 bits (175), Expect = 2e-12
Identities = 70/205 (34%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Frame = +3
Query: 9 PPSLPITL-----LPPPPDPIHQPSPWRSPWRRPRLAGSTRSRTSPRPTSAASSSSWPRS 173
PP+ P+ + +PPPP P+ P P T S T P P+ AS P
Sbjct: 68 PPAPPVAVPPPATVPPPPVPVASPPP-------------TPSATLPPPSPPASV---PVP 111
Query: 174 RCPASWPAAPSSAPRSP---SRAPGSPA------PST*LSRPPCSSRPSPP--SAPRSAG 320
PA+ P PS + P S P SPA P PP P PP +PR+
Sbjct: 112 PTPATTPPKPSPVQQPPVAASPPPSSPADLPPPNPPARSDTPPVVQSPPPPHRRSPRTPW 171
Query: 321 AP-----ATSSPPRTTPPPPSPATRPPSSPGRARPSRSTGGAPSAASTGAPAAAPTSSST 485
AP + SP + +P PSP P P PS S PSA +G P P S+
Sbjct: 172 APPMAPSPSGSPTKPSPASPSPIAGDPIIPTPNNPS-SPLATPSAPGSGTPVVTP--SAP 228
Query: 486 TAATPRCSSTRASRPRRSSRSPARSPTRSPPTTPSSRSSSPSSATA 623
+ P + A+ RS++S SP + SS SSA A
Sbjct: 229 VSGPPSPGTAPATAADRSNKS--LSPNTQDGSVSSSDGGMSSSAKA 272
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133339493
Number of Sequences: 59712
Number of extensions: 4843692
Number of successful extensions: 121899
Number of sequences better than 1.0e-10: 56
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 117187
Number of HSP's gapped (non-prelim): 655
length of query: 601
length of database: 26,991,925
effective HSP length: 53
effective length of query: 547
effective length of database: 23,827,189
effective search space: 13033472383
effective search space used: 13033472383
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 161 (67.1 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1797 Members:93 3pri:Y 1e-124
AAG02280.1 inducible phenylalanine ammonia-lyase [Triticum
aestivum]
(2584 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9630.m03979|protein phenylalanine ammonia-lyase 1343 0.0
9630.m03982|protein phenylalanine ammonia-lyase 1249 0.0
9633.m03282|protein phenylalanine ammonia-lyase 1243 0.0
9630.m03981|protein phenylalanine ammonia-lyase 1239 0.0
9632.m04200|protein phenylalanine ammonia-lyase 1231 0.0
9630.m03976|protein phenylalanine ammonia-lyase 1067 0.0
9632.m04196|protein phenylalanine ammonia-lyase 1062 0.0
9640.m03245|protein phenylalanine ammonia-lyase 1041 0.0
9639.m04502|protein phenylalanine ammonia-lyase 1036 0.0
9636.m02117|protein hypothetical protein 116 1e-25
9640.m02658|protein transposon protein, putative, CACTA, ... 76 3e-13
9631.m03557|protein putative protein kinase 72 4e-12
9630.m03979|protein phenylalanine ammonia-lyase
Length = 718
Score = 1343 bits (3438), Expect = 0.0
Identities = 671/715 (93%), Positives = 692/715 (95%), Gaps = 3/715 (0%)
Frame = +1
Query: 160 MECETGLVGSLNGDGLC---VSAPRAADPLNWVKTAEELTGSHLDEVKKMVAQFREPLVT 330
MECETGLV SLNGDGLC VSAP ADPLNW K A+EL GSHLDEVK+MV FR+PLV
Sbjct: 1 MECETGLVRSLNGDGLCMSSVSAPPRADPLNWGKAADELAGSHLDEVKRMVEDFRQPLVK 60
Query: 331 IEGASLGIAQVAAVAAGAGVARVALDESARGRVKESSDWVMTSMMNGTDSYGVTTGFGAT 510
IEGASL IAQVAAVAAGAG ARV LDESARGRVK SSDWVM SMMNGTDSYGVTTGFGAT
Sbjct: 61 IEGASLTIAQVAAVAAGAGDARVELDESARGRVKASSDWVMNSMMNGTDSYGVTTGFGAT 120
Query: 511 SHRRTKEGGALQRELIRFLNAGAFGTGTDGHVLPAEATRAAMLVRINTLLQGYSGIRFEI 690
SHRRTKEGGALQRELIRFLNAGAFGTGTDGHVLPAEATRAAMLVRINTLLQGYSGIRFEI
Sbjct: 121 SHRRTKEGGALQRELIRFLNAGAFGTGTDGHVLPAEATRAAMLVRINTLLQGYSGIRFEI 180
Query: 691 LEAITKLLNANVTPCLPLRGTITASGDLVPLSYIAGLITGRQNSVAVAPDGSKVTAAEAF 870
LEAITKLLNANVTPCLPLRGTITASGDLVPLSYIAGLITGRQNSVAVAPDG KVTAAEAF
Sbjct: 181 LEAITKLLNANVTPCLPLRGTITASGDLVPLSYIAGLITGRQNSVAVAPDGRKVTAAEAF 240
Query: 871 KIAGIEHGFFELQPKEGLAMVNGTAVGSGLASTVLFEANVLSVLAEVLSAVFCEVMNGKP 1050
KIAGIEHGFFELQPKEGLAMVNGTAVGSGLASTVLFEANVL++LAEVLSAVFCEVM GKP
Sbjct: 241 KIAGIEHGFFELQPKEGLAMVNGTAVGSGLASTVLFEANVLAILAEVLSAVFCEVMTGKP 300
Query: 1051 EFTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMKQAKKLGELDPLMKPKQDRYALRTSPQ 1230
E+TDHLTHKLKHHPGQIEAAAIMEHILEGSSYMK AKKLGELDPLMKPKQDRYALRTSPQ
Sbjct: 301 EYTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMKLAKKLGELDPLMKPKQDRYALRTSPQ 360
Query: 1231 WLGPQIEVIRFATKSIEREINSVNDNPLIDVSRGKAIHGGNFQGTPIGVSMDNTRLAIAA 1410
WLGPQIEVIRFATKSIEREINSVNDNPLIDVSRGKA+HGGNFQGTPIGVSMDNTRLA+AA
Sbjct: 361 WLGPQIEVIRFATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLALAA 420
Query: 1411 IGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTN 1590
IGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTN
Sbjct: 421 IGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTN 480
Query: 1591 HVQSAEQHNQDVNSLGLISSRKTAEAIDILKIMSSTFLVALCQAIDLRHIEENMKTAVRN 1770
HVQSAEQHNQDVNSLGLISSRKTAEAIDILK+MSSTFL+ALCQAIDLRH+EENMKTAV+N
Sbjct: 481 HVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLIALCQAIDLRHLEENMKTAVKN 540
Query: 1771 CVMQVAKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYPLMQKLRAVLV 1950
CVMQVAKK+LSMN+MGGLHIARFCEKDLLTAIDREAVFAYADDPCS NYPLMQKLRAVL+
Sbjct: 541 CVMQVAKKSLSMNHMGGLHIARFCEKDLLTAIDREAVFAYADDPCSANYPLMQKLRAVLI 600
Query: 1951 EHALANGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSY 2130
EHALANGD ER LETSIFAKVAEFEQ++RAALPKEVEAARA+VENGTPL PNRIK+CRSY
Sbjct: 601 EHALANGDAERVLETSIFAKVAEFEQHVRAALPKEVEAARAAVENGTPLVPNRIKECRSY 660
Query: 2131 PLYQFVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC 2304
PLY+FVRE GTEYLTGEKTRSPGEELNKVLVA+NERKHIDPLLECLKEWNGAPLPLC
Sbjct: 661 PLYRFVREEVGTEYLTGEKTRSPGEELNKVLVAINERKHIDPLLECLKEWNGAPLPLC 718
9630.m03982|protein phenylalanine ammonia-lyase
Length = 713
Score = 1249 bits (3197), Expect = 0.0
Identities = 625/715 (87%), Positives = 664/715 (92%)
Frame = +1
Query: 160 MECETGLVGSLNGDGLCVSAPRAADPLNWVKTAEELTGSHLDEVKKMVAQFREPLVTIEG 339
MECE G V + GLCV+APRA DPLNW K EE+TGSHLDEVK+MVA++R+PLV IEG
Sbjct: 1 MECENGRVSANGMSGLCVAAPRA-DPLNWGKATEEMTGSHLDEVKRMVAEYRQPLVKIEG 59
Query: 340 ASLGIAQVAAVAAGAGVARVALDESARGRVKESSDWVMTSMMNGTDSYGVTTGFGATSHR 519
ASL IAQVAAVAA AG ARV LDESAR RVK SSDWVM SMMNGTDSYGVTTGFGATSHR
Sbjct: 60 ASLRIAQVAAVAA-AGEARVELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHR 118
Query: 520 RTKEGGALQRELIRFLNAGAFGTGTDGHVLPAEATRAAMLVRINTLLQGYSGIRFEILEA 699
RTKEGGALQRELIRFLNAGAFGTGTDGHVLPAEATRAAMLVRINTLLQGYSGIRFEILEA
Sbjct: 119 RTKEGGALQRELIRFLNAGAFGTGTDGHVLPAEATRAAMLVRINTLLQGYSGIRFEILEA 178
Query: 700 ITKLLNANVTPCLPLRGTITASGDLVPLSYIAGLITGRQNSVAVAPDGSKVTAAEAFKIA 879
I KLLNANVTPCLPLRGTITASGDLVPLSYIAGL+TGR+N+VAVAPDGSKV AAEAFKIA
Sbjct: 179 IAKLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRENAVAVAPDGSKVNAAEAFKIA 238
Query: 880 GIEHGFFELQPKEGLAMVNGTAVGSGLASTVLFEANVLSVLAEVLSAVFCEVMNGKPEFT 1059
GI+ GFFELQPKEGLAMVNGTAVGSGLASTVLFEAN+L++LAEVLSAVFCEVMNGKPE+T
Sbjct: 239 GIQGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILAILAEVLSAVFCEVMNGKPEYT 298
Query: 1060 DHLTHKLKHHPGQIEAAAIMEHILEGSSYMKQAKKLGELDPLMKPKQDRYALRTSPQWLG 1239
DHLTHKLKHHPGQIEAAAIMEHILEGSSYMK AKKLGELDPLMKPKQDRYALRTSPQWLG
Sbjct: 299 DHLTHKLKHHPGQIEAAAIMEHILEGSSYMKHAKKLGELDPLMKPKQDRYALRTSPQWLG 358
Query: 1240 PQIEVIRFATKSIEREINSVNDNPLIDVSRGKAIHGGNFQGTPIGVSMDNTRLAIAAIGK 1419
PQIEVIR ATKSIEREINSVNDNPLIDVSRGKA+HGGNFQGTPIGVSMDNTRLAIAAIGK
Sbjct: 359 PQIEVIRAATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLAIAAIGK 418
Query: 1420 LMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQ 1599
LMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQ
Sbjct: 419 LMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQ 478
Query: 1600 SAEQHNQDVNSLGLISSRKTAEAIDILKIMSSTFLVALCQAIDLRHIEENMKTAVRNCVM 1779
SAEQHNQDVNSLGLISSRKT EAIDILK+MSSTFL+ALCQA+DLRHIEEN+K+AV++CVM
Sbjct: 479 SAEQHNQDVNSLGLISSRKTDEAIDILKLMSSTFLIALCQAVDLRHIEENVKSAVKSCVM 538
Query: 1780 QVAKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYPLMQKLRAVLVEHA 1959
VAKKTLS N+ G LH+ARFCEKDLL IDREAVFAYADDPCS NYPLM+KLR VLVE A
Sbjct: 539 TVAKKTLSTNSTGDLHVARFCEKDLLKEIDREAVFAYADDPCSHNYPLMKKLRNVLVERA 598
Query: 1960 LANGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLY 2139
LANG E +TS+FAKVA+FE+ +RA LP +EAARA+VENGT P+RI +CRSYPLY
Sbjct: 599 LANGAAEFNADTSVFAKVAQFEEELRATLPGAIEAARAAVENGTAAIPSRITECRSYPLY 658
Query: 2140 QFVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC 2304
+FVRE GT+YLTGEKTRSPGEELNKVLVA+NE KHIDPLLECLKEWNG PLP+C
Sbjct: 659 RFVREELGTKYLTGEKTRSPGEELNKVLVAINEGKHIDPLLECLKEWNGEPLPIC 713
9633.m03282|protein phenylalanine ammonia-lyase
Length = 716
Score = 1243 bits (3181), Expect = 0.0
Identities = 625/715 (87%), Positives = 662/715 (92%), Gaps = 3/715 (0%)
Frame = +1
Query: 160 MECETGLVGSLNGDGLCVSAPRAADPLNWVKTAEELTGSHLDEVKKMVAQFREPLVTIEG 339
MECETG V + GLC+ PRA DPLNW K AEE+ GSHLDEVK+MVA++R+P+V IEG
Sbjct: 1 MECETGYVAAAADGGLCMEVPRA-DPLNWGKAAEEMAGSHLDEVKRMVAEYRQPVVRIEG 59
Query: 340 ASLGIAQVAAVAAGAG---VARVALDESARGRVKESSDWVMTSMMNGTDSYGVTTGFGAT 510
ASL IAQVAAVA GAG A V LDESAR RVK SSDWVM SM NGTDSYGVTTGFGAT
Sbjct: 60 ASLRIAQVAAVA-GAGDGEAAMVELDESARERVKASSDWVMNSMANGTDSYGVTTGFGAT 118
Query: 511 SHRRTKEGGALQRELIRFLNAGAFGTGTDGHVLPAEATRAAMLVRINTLLQGYSGIRFEI 690
SHRRTKEGGALQRELIRFLNAGAFGTG DGHVLPA ATRAAMLVRINTLLQGYSGIRFEI
Sbjct: 119 SHRRTKEGGALQRELIRFLNAGAFGTGADGHVLPAGATRAAMLVRINTLLQGYSGIRFEI 178
Query: 691 LEAITKLLNANVTPCLPLRGTITASGDLVPLSYIAGLITGRQNSVAVAPDGSKVTAAEAF 870
LEA+ KLLNANVTPCLPLRGTITASGDLVPLSYIAGL+TGR+NSVAVAPDG KV AAEAF
Sbjct: 179 LEAVAKLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRENSVAVAPDGRKVNAAEAF 238
Query: 871 KIAGIEHGFFELQPKEGLAMVNGTAVGSGLASTVLFEANVLSVLAEVLSAVFCEVMNGKP 1050
KIAGI+ GFFELQPKEGLAMVNGTAVGSGLASTVLFEANVL++LAEVLSAVFCEVMNGKP
Sbjct: 239 KIAGIQGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANVLAILAEVLSAVFCEVMNGKP 298
Query: 1051 EFTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMKQAKKLGELDPLMKPKQDRYALRTSPQ 1230
E+TDHLTHKLKHHPGQIEAAAIMEHILEGSSYMK+AK+LGELDPLMKPKQDRYALRTSPQ
Sbjct: 299 EYTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMKEAKRLGELDPLMKPKQDRYALRTSPQ 358
Query: 1231 WLGPQIEVIRFATKSIEREINSVNDNPLIDVSRGKAIHGGNFQGTPIGVSMDNTRLAIAA 1410
WLGPQIEVIR ATKSIEREINSVNDNPLIDVSRGKA+HGGNFQGTPIGVSMDNTRLAIAA
Sbjct: 359 WLGPQIEVIRAATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLAIAA 418
Query: 1411 IGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTN 1590
IGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTN
Sbjct: 419 IGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTN 478
Query: 1591 HVQSAEQHNQDVNSLGLISSRKTAEAIDILKIMSSTFLVALCQAIDLRHIEENMKTAVRN 1770
HVQSAEQHNQDVNSLGLISSRKTAEAIDILK+MSSTFLVALCQAIDLRHIEEN+K AV+
Sbjct: 479 HVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHIEENVKGAVKT 538
Query: 1771 CVMQVAKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYPLMQKLRAVLV 1950
CVM VAKKTLS N+ GGLH+ARFCEKDLL+ IDREAVFAYADDPCS NYPLM+KLR+VLV
Sbjct: 539 CVMTVAKKTLSTNSTGGLHVARFCEKDLLSEIDREAVFAYADDPCSANYPLMKKLRSVLV 598
Query: 1951 EHALANGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSY 2130
E ALANG E ETS+ AKVA FE+ +RAALP+ VEAARA+VE+GT APNRI +CRSY
Sbjct: 599 ERALANGAAEFDAETSVLAKVARFEEELRAALPRAVEAARAAVESGTAAAPNRIAECRSY 658
Query: 2131 PLYQFVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC 2304
PLY+FVRE GT YLTGEKTRSPGEELNKVLVA+N+ KHIDPLLECLKEWNGAPLP+C
Sbjct: 659 PLYRFVREELGTAYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGAPLPIC 716
9630.m03981|protein phenylalanine ammonia-lyase
Length = 713
Score = 1239 bits (3170), Expect = 0.0
Identities = 624/715 (87%), Positives = 663/715 (92%)
Frame = +1
Query: 160 MECETGLVGSLNGDGLCVSAPRAADPLNWVKTAEELTGSHLDEVKKMVAQFREPLVTIEG 339
M CE G V + +GLC++APRA DPLNW K AEE++GSHLDEVK+MVA++R+PLV IEG
Sbjct: 1 MACENGQVAADGINGLCMAAPRA-DPLNWGKAAEEMSGSHLDEVKRMVAEYRQPLVKIEG 59
Query: 340 ASLGIAQVAAVAAGAGVARVALDESARGRVKESSDWVMTSMMNGTDSYGVTTGFGATSHR 519
ASL IAQVAAVAA AG ARV LDESAR RVK SSDWVM SMMNGTDSYGVTTGFGATSHR
Sbjct: 60 ASLRIAQVAAVAA-AGEARVELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHR 118
Query: 520 RTKEGGALQRELIRFLNAGAFGTGTDGHVLPAEATRAAMLVRINTLLQGYSGIRFEILEA 699
RTKEGGALQRELIRFLNAGAFGTGTDGHVL AEATRAAMLVRINTLLQGYSGIRFEILEA
Sbjct: 119 RTKEGGALQRELIRFLNAGAFGTGTDGHVLSAEATRAAMLVRINTLLQGYSGIRFEILEA 178
Query: 700 ITKLLNANVTPCLPLRGTITASGDLVPLSYIAGLITGRQNSVAVAPDGSKVTAAEAFKIA 879
ITKLLNANVTPCLPLRGT+TASGDLVPLSYIAGL+TGR+NSVAVAPDGSKV AAEAFKIA
Sbjct: 179 ITKLLNANVTPCLPLRGTVTASGDLVPLSYIAGLVTGRENSVAVAPDGSKVNAAEAFKIA 238
Query: 880 GIEHGFFELQPKEGLAMVNGTAVGSGLASTVLFEANVLSVLAEVLSAVFCEVMNGKPEFT 1059
GI+ GFFELQPKEGLAMVNGTAVGSGLASTVLFEAN+L+VLAEVLSAVFCEVMNGKPE+T
Sbjct: 239 GIQGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILAVLAEVLSAVFCEVMNGKPEYT 298
Query: 1060 DHLTHKLKHHPGQIEAAAIMEHILEGSSYMKQAKKLGELDPLMKPKQDRYALRTSPQWLG 1239
DHLTHKLKHHPGQIEAAAIMEHILEGSSYMK AKKLGELDPLMKPKQDRYALRTSPQWLG
Sbjct: 299 DHLTHKLKHHPGQIEAAAIMEHILEGSSYMKLAKKLGELDPLMKPKQDRYALRTSPQWLG 358
Query: 1240 PQIEVIRFATKSIEREINSVNDNPLIDVSRGKAIHGGNFQGTPIGVSMDNTRLAIAAIGK 1419
PQIEVIR ATKSIEREINSVNDNPLIDVSR KA+HGGNFQGTPIGVSMDNTRLAIAAIGK
Sbjct: 359 PQIEVIRAATKSIEREINSVNDNPLIDVSRDKALHGGNFQGTPIGVSMDNTRLAIAAIGK 418
Query: 1420 LMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQ 1599
LMFAQFSELVND+YNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQ
Sbjct: 419 LMFAQFSELVNDYYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQ 478
Query: 1600 SAEQHNQDVNSLGLISSRKTAEAIDILKIMSSTFLVALCQAIDLRHIEENMKTAVRNCVM 1779
SAEQHNQDVNSLGLISSRKTAEA++ILK+MSSTFLVALCQAIDLR IEEN+K+AV++CVM
Sbjct: 479 SAEQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVALCQAIDLRQIEENVKSAVKSCVM 538
Query: 1780 QVAKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYPLMQKLRAVLVEHA 1959
VA+KTLS + GGLH ARFCEKDLL IDREAVFAYADDPCS NYPLM+KLR VLVE A
Sbjct: 539 TVARKTLSTSATGGLHAARFCEKDLLQEIDREAVFAYADDPCSANYPLMKKLRNVLVERA 598
Query: 1960 LANGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLY 2139
LANG E ETS+FAKVA+FE+ +RAALP V AARA+VENGT PNRI +CRSYPLY
Sbjct: 599 LANGAAEFNAETSVFAKVAQFEEELRAALPAAVLAARAAVENGTAATPNRITECRSYPLY 658
Query: 2140 QFVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC 2304
+FVRE GT YLTGEKTRSPGEELNKVLVA+N+ KHIDPLLECLKEWNGAPLP+C
Sbjct: 659 RFVREELGTAYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGAPLPIC 713
9632.m04200|protein phenylalanine ammonia-lyase
Length = 714
Score = 1231 bits (3150), Expect = 0.0
Identities = 617/715 (86%), Positives = 654/715 (91%), Gaps = 1/715 (0%)
Frame = +1
Query: 160 MECETGLVGSL-NGDGLCVSAPRAADPLNWVKTAEELTGSHLDEVKKMVAQFREPLVTIE 336
MECE G V + NG LCV+ PRA DPLNW K AEEL+GSHLD VK+MV ++R P+VTIE
Sbjct: 1 MECENGHVAAAANGSSLCVAKPRA-DPLNWGKAAEELSGSHLDAVKRMVEEYRRPVVTIE 59
Query: 337 GASLGIAQVAAVAAGAGVARVALDESARGRVKESSDWVMTSMMNGTDSYGVTTGFGATSH 516
GASL IAQVAAVA+ AG ARV LDESARGRVK SSDWVM SMMNGTDSYGVTTGFGATSH
Sbjct: 60 GASLTIAQVAAVAS-AGAARVELDESARGRVKASSDWVMNSMMNGTDSYGVTTGFGATSH 118
Query: 517 RRTKEGGALQRELIRFLNAGAFGTGTDGHVLPAEATRAAMLVRINTLLQGYSGIRFEILE 696
RRTKEGGALQRELIRFLNAGAFG G DGHVLPA ATRAAMLVRINTLLQGYSGIRFEILE
Sbjct: 119 RRTKEGGALQRELIRFLNAGAFGNGDDGHVLPAAATRAAMLVRINTLLQGYSGIRFEILE 178
Query: 697 AITKLLNANVTPCLPLRGTITASGDLVPLSYIAGLITGRQNSVAVAPDGSKVTAAEAFKI 876
I LLNANVTPCLPLRGTITASGDLVPLSYIAGL+TGR NSVAV PDG KV AAEAFKI
Sbjct: 179 TIATLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRPNSVAVTPDGRKVDAAEAFKI 238
Query: 877 AGIEHGFFELQPKEGLAMVNGTAVGSGLASTVLFEANVLSVLAEVLSAVFCEVMNGKPEF 1056
AGI+HGFFELQPKEGLAMVNGTAVGSGLAS VLFEANVL VLAEVLSAVFCEVMNGKPE+
Sbjct: 239 AGIQHGFFELQPKEGLAMVNGTAVGSGLASMVLFEANVLGVLAEVLSAVFCEVMNGKPEY 298
Query: 1057 TDHLTHKLKHHPGQIEAAAIMEHILEGSSYMKQAKKLGELDPLMKPKQDRYALRTSPQWL 1236
TDHLTHKLKHHPGQIEAAAIMEHILEGSSYM AKKLGELDPLMKPKQDRYALRTSPQWL
Sbjct: 299 TDHLTHKLKHHPGQIEAAAIMEHILEGSSYMMLAKKLGELDPLMKPKQDRYALRTSPQWL 358
Query: 1237 GPQIEVIRFATKSIEREINSVNDNPLIDVSRGKAIHGGNFQGTPIGVSMDNTRLAIAAIG 1416
GPQIEVIR ATKSIEREINSVNDNPLIDVSRGKA+HGGNFQGTPIGVSMDNTRLAIAAIG
Sbjct: 359 GPQIEVIRAATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLAIAAIG 418
Query: 1417 KLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHV 1596
KLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFL NPVTNHV
Sbjct: 419 KLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHV 478
Query: 1597 QSAEQHNQDVNSLGLISSRKTAEAIDILKIMSSTFLVALCQAIDLRHIEENMKTAVRNCV 1776
QSAEQHNQDVNSLGLISSRKTAEAID+LK+MSSTFL+ALCQAIDLRH+EEN+++AV+ CV
Sbjct: 479 QSAEQHNQDVNSLGLISSRKTAEAIDVLKLMSSTFLIALCQAIDLRHLEENVRSAVKGCV 538
Query: 1777 MQVAKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYPLMQKLRAVLVEH 1956
VA+KTLS + G LH ARFCEKDLL AIDREAVFAYADDPCS NYPLMQK+RAVL+EH
Sbjct: 539 TTVARKTLSTSATGDLHKARFCEKDLLQAIDREAVFAYADDPCSANYPLMQKMRAVLIEH 598
Query: 1957 ALANGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPL 2136
ALANG+ ER ++TS+FAKVA FE+ +R ALP+EVEAARA+VENGT NRI +CRSYPL
Sbjct: 599 ALANGEAERNVDTSVFAKVATFEEELRVALPREVEAARAAVENGTAAKANRITECRSYPL 658
Query: 2137 YQFVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC 2304
Y+FVRE GTEYLTGEKTRSPGEE+NKV VAMN+ KHID LLECLKEWNG PLP+C
Sbjct: 659 YRFVREELGTEYLTGEKTRSPGEEVNKVFVAMNQGKHIDALLECLKEWNGEPLPIC 714
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 181909095
Number of Sequences: 59712
Number of extensions: 6146131
Number of successful extensions: 75087
Number of sequences better than 1.0e-10: 24
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 74922
Number of HSP's gapped (non-prelim): 54
length of query: 861
length of database: 26,991,925
effective HSP length: 54
effective length of query: 806
effective length of database: 23,767,477
effective search space: 19156586462
effective search space used: 19156586462
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 162 (67.5 bits)
BLASTX 2.0.11 [Jan-20-2000]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CONTIG1800 Members:28 3pri:Y 1e-120
Q43210 Phenylalanine ammonia-lyase pir||T06545
phenylalanine ammonia-lyase (EC 4.3.1.5) - wheat
(2576 letters)
Database: all.pep
59,712 sequences; 26,991,925 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
9632.m04200|protein phenylalanine ammonia-lyase 1320 0.0
9630.m03982|protein phenylalanine ammonia-lyase 1259 0.0
9630.m03979|protein phenylalanine ammonia-lyase 1254 0.0
9630.m03981|protein phenylalanine ammonia-lyase 1252 0.0
9633.m03282|protein phenylalanine ammonia-lyase 1246 0.0
9632.m04196|protein phenylalanine ammonia-lyase 1067 0.0
9630.m03976|protein phenylalanine ammonia-lyase 1065 0.0
9640.m03245|protein phenylalanine ammonia-lyase 1022 0.0
9639.m04502|protein phenylalanine ammonia-lyase 1012 0.0
9636.m02117|protein hypothetical protein 135 4e-31
9640.m02658|protein transposon protein, putative, CACTA, ... 92 5e-18
9632.m04200|protein phenylalanine ammonia-lyase
Length = 714
Score = 1320 bits (3379), Expect = 0.0
Identities = 659/713 (92%), Positives = 683/713 (95%), Gaps = 2/713 (0%)
Frame = +1
Query: 169 MECENAHVAA--NGDGLCVAQPARADPLNWGKAAEELSGSHLDAVKRMVEEYRKPVVTME 342
MECEN HVAA NG LCVA+P RADPLNWGKAAEELSGSHLDAVKRMVEEYR+PVVT+E
Sbjct: 1 MECENGHVAAAANGSSLCVAKP-RADPLNWGKAAEELSGSHLDAVKRMVEEYRRPVVTIE 59
Query: 343 GASLTIAMVAAVAAGNDTRVELDESARGRVKESSDWVMNSMMNGTDSYGVTTGFGATSHR 522
GASLTIA VAAVA+ RVELDESARGRVK SSDWVMNSMMNGTDSYGVTTGFGATSHR
Sbjct: 60 GASLTIAQVAAVASAGAARVELDESARGRVKASSDWVMNSMMNGTDSYGVTTGFGATSHR 119
Query: 523 RTKEGGALQRELIRFLNAGAFGTGTDGHVLPAATTRAAMLVRVNTLLQGYSGIRFEILET 702
RTKEGGALQRELIRFLNAGAFG G DGHVLPAA TRAAMLVR+NTLLQGYSGIRFEILET
Sbjct: 120 RTKEGGALQRELIRFLNAGAFGNGDDGHVLPAAATRAAMLVRINTLLQGYSGIRFEILET 179
Query: 703 IATLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRPNSVATAPDGTKVNAAEAFKIA 882
IATLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRPNSVA PDG KV+AAEAFKIA
Sbjct: 180 IATLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRPNSVAVTPDGRKVDAAEAFKIA 239
Query: 883 GIQHGFFELQPKEGLAMVNGTAVGSGLASMVLFEANVLSLLAEVLSAVFCEVMNGKPEYT 1062
GIQHGFFELQPKEGLAMVNGTAVGSGLASMVLFEANVL +LAEVLSAVFCEVMNGKPEYT
Sbjct: 240 GIQHGFFELQPKEGLAMVNGTAVGSGLASMVLFEANVLGVLAEVLSAVFCEVMNGKPEYT 299
Query: 1063 DHLTHKLKHHPGQIEAAAIMEHILEGSSYMMLAKKLGELDPLMKPKQDRYALRTSPQWLG 1242
DHLTHKLKHHPGQIEAAAIMEHILEGSSYMMLAKKLGELDPLMKPKQDRYALRTSPQWLG
Sbjct: 300 DHLTHKLKHHPGQIEAAAIMEHILEGSSYMMLAKKLGELDPLMKPKQDRYALRTSPQWLG 359
Query: 1243 PQIEVIRAATKSIEREINSVNDNPLIDVSRGKAIHGGNFQGTPIGVSMDNTRLAIAAIGK 1422
PQIEVIRAATKSIEREINSVNDNPLIDVSRGKA+HGGNFQGTPIGVSMDNTRLAIAAIGK
Sbjct: 360 PQIEVIRAATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLAIAAIGK 419
Query: 1423 LMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQ 1602
LMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFL NPVTNHVQ
Sbjct: 420 LMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQ 479
Query: 1603 SAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENVKNAVKSCVK 1782
SAEQHNQDVNSLGLISSRKTAEAID+LKLMSSTFL+ALCQAIDLRHLEENV++AVK CV
Sbjct: 480 SAEQHNQDVNSLGLISSRKTAEAIDVLKLMSSTFLIALCQAIDLRHLEENVRSAVKGCVT 539
Query: 1783 TVARKTLSTDSNGHLHNARFCEKDLLLTIDREAVFAYADDPCSANYPLMQKMRAVLVEHA 1962
TVARKTLST + G LH ARFCEKDLL IDREAVFAYADDPCSANYPLMQKMRAVL+EHA
Sbjct: 540 TVARKTLSTSATGDLHKARFCEKDLLQAIDREAVFAYADDPCSANYPLMQKMRAVLIEHA 599
Query: 1963 LANGEAEHDVETSVFAKLATFEQEVRAVLPKEVEAARSAVENGTAAQQNRITECRSYPLY 2142
LANGEAE +V+TSVFAK+ATFE+E+R LP+EVEAAR+AVENGTAA+ NRITECRSYPLY
Sbjct: 600 LANGEAERNVDTSVFAKVATFEEELRVALPREVEAARAAVENGTAAKANRITECRSYPLY 659
Query: 2143 RFVRKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC 2307
RFVR+ELGTEYLTGEKTRSPGEEV+KVFVAMNQGKHIDALLECLKEWNGEPLPIC
Sbjct: 660 RFVREELGTEYLTGEKTRSPGEEVNKVFVAMNQGKHIDALLECLKEWNGEPLPIC 714
9630.m03982|protein phenylalanine ammonia-lyase
Length = 713
Score = 1259 bits (3221), Expect = 0.0
Identities = 630/713 (88%), Positives = 666/713 (93%), Gaps = 1/713 (0%)
Frame = +1
Query: 169 MECENAHVAANG-DGLCVAQPARADPLNWGKAAEELSGSHLDAVKRMVEEYRKPVVTMEG 345
MECEN V+ANG GLCVA P RADPLNWGKA EE++GSHLD VKRMV EYR+P+V +EG
Sbjct: 1 MECENGRVSANGMSGLCVAAP-RADPLNWGKATEEMTGSHLDEVKRMVAEYRQPLVKIEG 59
Query: 346 ASLTIAMVAAVAAGNDTRVELDESARGRVKESSDWVMNSMMNGTDSYGVTTGFGATSHRR 525
ASL IA VAAVAA + RVELDESAR RVK SSDWVMNSMMNGTDSYGVTTGFGATSHRR
Sbjct: 60 ASLRIAQVAAVAAAGEARVELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHRR 119
Query: 526 TKEGGALQRELIRFLNAGAFGTGTDGHVLPAATTRAAMLVRVNTLLQGYSGIRFEILETI 705
TKEGGALQRELIRFLNAGAFGTGTDGHVLPA TRAAMLVR+NTLLQGYSGIRFEILE I
Sbjct: 120 TKEGGALQRELIRFLNAGAFGTGTDGHVLPAEATRAAMLVRINTLLQGYSGIRFEILEAI 179
Query: 706 ATLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRPNSVATAPDGTKVNAAEAFKIAG 885
A LLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGR N+VA APDG+KVNAAEAFKIAG
Sbjct: 180 AKLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRENAVAVAPDGSKVNAAEAFKIAG 239
Query: 886 IQHGFFELQPKEGLAMVNGTAVGSGLASMVLFEANVLSLLAEVLSAVFCEVMNGKPEYTD 1065
IQ GFFELQPKEGLAMVNGTAVGSGLAS VLFEAN+L++LAEVLSAVFCEVMNGKPEYTD
Sbjct: 240 IQGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILAILAEVLSAVFCEVMNGKPEYTD 299
Query: 1066 HLTHKLKHHPGQIEAAAIMEHILEGSSYMMLAKKLGELDPLMKPKQDRYALRTSPQWLGP 1245
HLTHKLKHHPGQIEAAAIMEHILEGSSYM AKKLGELDPLMKPKQDRYALRTSPQWLGP
Sbjct: 300 HLTHKLKHHPGQIEAAAIMEHILEGSSYMKHAKKLGELDPLMKPKQDRYALRTSPQWLGP 359
Query: 1246 QIEVIRAATKSIEREINSVNDNPLIDVSRGKAIHGGNFQGTPIGVSMDNTRLAIAAIGKL 1425
QIEVIRAATKSIEREINSVNDNPLIDVSRGKA+HGGNFQGTPIGVSMDNTRLAIAAIGKL
Sbjct: 360 QIEVIRAATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLAIAAIGKL 419
Query: 1426 MFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQS 1605
MFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQS
Sbjct: 420 MFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQS 479
Query: 1606 AEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENVKNAVKSCVKT 1785
AEQHNQDVNSLGLISSRKT EAIDILKLMSSTFL+ALCQA+DLRH+EENVK+AVKSCV T
Sbjct: 480 AEQHNQDVNSLGLISSRKTDEAIDILKLMSSTFLIALCQAVDLRHIEENVKSAVKSCVMT 539
Query: 1786 VARKTLSTDSNGHLHNARFCEKDLLLTIDREAVFAYADDPCSANYPLMQKMRAVLVEHAL 1965
VA+KTLST+S G LH ARFCEKDLL IDREAVFAYADDPCS NYPLM+K+R VLVE AL
Sbjct: 540 VAKKTLSTNSTGDLHVARFCEKDLLKEIDREAVFAYADDPCSHNYPLMKKLRNVLVERAL 599
Query: 1966 ANGEAEHDVETSVFAKLATFEQEVRAVLPKEVEAARSAVENGTAAQQNRITECRSYPLYR 2145
ANG AE + +TSVFAK+A FE+E+RA LP +EAAR+AVENGTAA +RITECRSYPLYR
Sbjct: 600 ANGAAEFNADTSVFAKVAQFEEELRATLPGAIEAARAAVENGTAAIPSRITECRSYPLYR 659
Query: 2146 FVRKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC 2307
FVR+ELGT+YLTGEKTRSPGEE++KV VA+N+GKHID LLECLKEWNGEPLPIC
Sbjct: 660 FVREELGTKYLTGEKTRSPGEELNKVLVAINEGKHIDPLLECLKEWNGEPLPIC 713
9630.m03979|protein phenylalanine ammonia-lyase
Length = 718
Score = 1254 bits (3208), Expect = 0.0
Identities = 628/713 (88%), Positives = 664/713 (93%), Gaps = 5/713 (0%)
Frame = +1
Query: 169 MECENAHVAA-NGDGLC---VAQPARADPLNWGKAAEELSGSHLDAVKRMVEEYRKPVVT 336
MECE V + NGDGLC V+ P RADPLNWGKAA+EL+GSHLD VKRMVE++R+P+V
Sbjct: 1 MECETGLVRSLNGDGLCMSSVSAPPRADPLNWGKAADELAGSHLDEVKRMVEDFRQPLVK 60
Query: 337 MEGASLTIAMVAAVAAG-NDTRVELDESARGRVKESSDWVMNSMMNGTDSYGVTTGFGAT 513
+EGASLTIA VAAVAAG D RVELDESARGRVK SSDWVMNSMMNGTDSYGVTTGFGAT
Sbjct: 61 IEGASLTIAQVAAVAAGAGDARVELDESARGRVKASSDWVMNSMMNGTDSYGVTTGFGAT 120
Query: 514 SHRRTKEGGALQRELIRFLNAGAFGTGTDGHVLPAATTRAAMLVRVNTLLQGYSGIRFEI 693
SHRRTKEGGALQRELIRFLNAGAFGTGTDGHVLPA TRAAMLVR+NTLLQGYSGIRFEI
Sbjct: 121 SHRRTKEGGALQRELIRFLNAGAFGTGTDGHVLPAEATRAAMLVRINTLLQGYSGIRFEI 180
Query: 694 LETIATLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRPNSVATAPDGTKVNAAEAF 873
LE I LLNANVTPCLPLRGTITASGDLVPLSYIAGL+TGR NSVA APDG KV AAEAF
Sbjct: 181 LEAITKLLNANVTPCLPLRGTITASGDLVPLSYIAGLITGRQNSVAVAPDGRKVTAAEAF 240
Query: 874 KIAGIQHGFFELQPKEGLAMVNGTAVGSGLASMVLFEANVLSLLAEVLSAVFCEVMNGKP 1053
KIAGI+HGFFELQPKEGLAMVNGTAVGSGLAS VLFEANVL++LAEVLSAVFCEVM GKP
Sbjct: 241 KIAGIEHGFFELQPKEGLAMVNGTAVGSGLASTVLFEANVLAILAEVLSAVFCEVMTGKP 300
Query: 1054 EYTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMMLAKKLGELDPLMKPKQDRYALRTSPQ 1233
EYTDHLTHKLKHHPGQIEAAAIMEHILEGSSYM LAKKLGELDPLMKPKQDRYALRTSPQ
Sbjct: 301 EYTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMKLAKKLGELDPLMKPKQDRYALRTSPQ 360
Query: 1234 WLGPQIEVIRAATKSIEREINSVNDNPLIDVSRGKAIHGGNFQGTPIGVSMDNTRLAIAA 1413
WLGPQIEVIR ATKSIEREINSVNDNPLIDVSRGKA+HGGNFQGTPIGVSMDNTRLA+AA
Sbjct: 361 WLGPQIEVIRFATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLALAA 420
Query: 1414 IGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTN 1593
IGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTN
Sbjct: 421 IGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTN 480
Query: 1594 HVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENVKNAVKS 1773
HVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFL+ALCQAIDLRHLEEN+K AVK+
Sbjct: 481 HVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLIALCQAIDLRHLEENMKTAVKN 540
Query: 1774 CVKTVARKTLSTDSNGHLHNARFCEKDLLLTIDREAVFAYADDPCSANYPLMQKMRAVLV 1953
CV VA+K+LS + G LH ARFCEKDLL IDREAVFAYADDPCSANYPLMQK+RAVL+
Sbjct: 541 CVMQVAKKSLSMNHMGGLHIARFCEKDLLTAIDREAVFAYADDPCSANYPLMQKLRAVLI 600
Query: 1954 EHALANGEAEHDVETSVFAKLATFEQEVRAVLPKEVEAARSAVENGTAAQQNRITECRSY 2133
EHALANG+AE +ETS+FAK+A FEQ VRA LPKEVEAAR+AVENGT NRI ECRSY
Sbjct: 601 EHALANGDAERVLETSIFAKVAEFEQHVRAALPKEVEAARAAVENGTPLVPNRIKECRSY 660
Query: 2134 PLYRFVRKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC 2307
PLYRFVR+E+GTEYLTGEKTRSPGEE++KV VA+N+ KHID LLECLKEWNG PLP+C
Sbjct: 661 PLYRFVREEVGTEYLTGEKTRSPGEELNKVLVAINERKHIDPLLECLKEWNGAPLPLC 718
9630.m03981|protein phenylalanine ammonia-lyase
Length = 713
Score = 1252 bits (3203), Expect = 0.0
Identities = 630/713 (88%), Positives = 662/713 (92%), Gaps = 1/713 (0%)
Frame = +1
Query: 169 MECENAHVAANG-DGLCVAQPARADPLNWGKAAEELSGSHLDAVKRMVEEYRKPVVTMEG 345
M CEN VAA+G +GLC+A P RADPLNWGKAAEE+SGSHLD VKRMV EYR+P+V +EG
Sbjct: 1 MACENGQVAADGINGLCMAAP-RADPLNWGKAAEEMSGSHLDEVKRMVAEYRQPLVKIEG 59
Query: 346 ASLTIAMVAAVAAGNDTRVELDESARGRVKESSDWVMNSMMNGTDSYGVTTGFGATSHRR 525
ASL IA VAAVAA + RVELDESAR RVK SSDWVMNSMMNGTDSYGVTTGFGATSHRR
Sbjct: 60 ASLRIAQVAAVAAAGEARVELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHRR 119
Query: 526 TKEGGALQRELIRFLNAGAFGTGTDGHVLPAATTRAAMLVRVNTLLQGYSGIRFEILETI 705
TKEGGALQRELIRFLNAGAFGTGTDGHVL A TRAAMLVR+NTLLQGYSGIRFEILE I
Sbjct: 120 TKEGGALQRELIRFLNAGAFGTGTDGHVLSAEATRAAMLVRINTLLQGYSGIRFEILEAI 179
Query: 706 ATLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRPNSVATAPDGTKVNAAEAFKIAG 885
LLNANVTPCLPLRGT+TASGDLVPLSYIAGLVTGR NSVA APDG+KVNAAEAFKIAG
Sbjct: 180 TKLLNANVTPCLPLRGTVTASGDLVPLSYIAGLVTGRENSVAVAPDGSKVNAAEAFKIAG 239
Query: 886 IQHGFFELQPKEGLAMVNGTAVGSGLASMVLFEANVLSLLAEVLSAVFCEVMNGKPEYTD 1065
IQ GFFELQPKEGLAMVNGTAVGSGLAS VLFEAN+L++LAEVLSAVFCEVMNGKPEYTD
Sbjct: 240 IQGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILAVLAEVLSAVFCEVMNGKPEYTD 299
Query: 1066 HLTHKLKHHPGQIEAAAIMEHILEGSSYMMLAKKLGELDPLMKPKQDRYALRTSPQWLGP 1245
HLTHKLKHHPGQIEAAAIMEHILEGSSYM LAKKLGELDPLMKPKQDRYALRTSPQWLGP
Sbjct: 300 HLTHKLKHHPGQIEAAAIMEHILEGSSYMKLAKKLGELDPLMKPKQDRYALRTSPQWLGP 359
Query: 1246 QIEVIRAATKSIEREINSVNDNPLIDVSRGKAIHGGNFQGTPIGVSMDNTRLAIAAIGKL 1425
QIEVIRAATKSIEREINSVNDNPLIDVSR KA+HGGNFQGTPIGVSMDNTRLAIAAIGKL
Sbjct: 360 QIEVIRAATKSIEREINSVNDNPLIDVSRDKALHGGNFQGTPIGVSMDNTRLAIAAIGKL 419
Query: 1426 MFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQS 1605
MFAQFSELVND+YNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQS
Sbjct: 420 MFAQFSELVNDYYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQS 479
Query: 1606 AEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENVKNAVKSCVKT 1785
AEQHNQDVNSLGLISSRKTAEA++ILKLMSSTFLVALCQAIDLR +EENVK+AVKSCV T
Sbjct: 480 AEQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVALCQAIDLRQIEENVKSAVKSCVMT 539
Query: 1786 VARKTLSTDSNGHLHNARFCEKDLLLTIDREAVFAYADDPCSANYPLMQKMRAVLVEHAL 1965
VARKTLST + G LH ARFCEKDLL IDREAVFAYADDPCSANYPLM+K+R VLVE AL
Sbjct: 540 VARKTLSTSATGGLHAARFCEKDLLQEIDREAVFAYADDPCSANYPLMKKLRNVLVERAL 599
Query: 1966 ANGEAEHDVETSVFAKLATFEQEVRAVLPKEVEAARSAVENGTAAQQNRITECRSYPLYR 2145
ANG AE + ETSVFAK+A FE+E+RA LP V AAR+AVENGTAA NRITECRSYPLYR
Sbjct: 600 ANGAAEFNAETSVFAKVAQFEEELRAALPAAVLAARAAVENGTAATPNRITECRSYPLYR 659
Query: 2146 FVRKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC 2307
FVR+ELGT YLTGEKTRSPGEE++KV VA+NQGKHID LLECLKEWNG PLPIC
Sbjct: 660 FVREELGTAYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGAPLPIC 713
9633.m03282|protein phenylalanine ammonia-lyase
Length = 716
Score = 1246 bits (3189), Expect = 0.0
Identities = 630/713 (88%), Positives = 659/713 (92%), Gaps = 4/713 (0%)
Frame = +1
Query: 169 MECENAHVAANGDG-LCVAQPARADPLNWGKAAEELSGSHLDAVKRMVEEYRKPVVTMEG 345
MECE +VAA DG LC+ P RADPLNWGKAAEE++GSHLD VKRMV EYR+PVV +EG
Sbjct: 1 MECETGYVAAAADGGLCMEVP-RADPLNWGKAAEEMAGSHLDEVKRMVAEYRQPVVRIEG 59
Query: 346 ASLTIAMVAAVAAGND---TRVELDESARGRVKESSDWVMNSMMNGTDSYGVTTGFGATS 516
ASL IA VAAVA D VELDESAR RVK SSDWVMNSM NGTDSYGVTTGFGATS
Sbjct: 60 ASLRIAQVAAVAGAGDGEAAMVELDESARERVKASSDWVMNSMANGTDSYGVTTGFGATS 119
Query: 517 HRRTKEGGALQRELIRFLNAGAFGTGTDGHVLPAATTRAAMLVRVNTLLQGYSGIRFEIL 696
HRRTKEGGALQRELIRFLNAGAFGTG DGHVLPA TRAAMLVR+NTLLQGYSGIRFEIL
Sbjct: 120 HRRTKEGGALQRELIRFLNAGAFGTGADGHVLPAGATRAAMLVRINTLLQGYSGIRFEIL 179
Query: 697 ETIATLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRPNSVATAPDGTKVNAAEAFK 876
E +A LLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGR NSVA APDG KVNAAEAFK
Sbjct: 180 EAVAKLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRENSVAVAPDGRKVNAAEAFK 239
Query: 877 IAGIQHGFFELQPKEGLAMVNGTAVGSGLASMVLFEANVLSLLAEVLSAVFCEVMNGKPE 1056
IAGIQ GFFELQPKEGLAMVNGTAVGSGLAS VLFEANVL++LAEVLSAVFCEVMNGKPE
Sbjct: 240 IAGIQGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANVLAILAEVLSAVFCEVMNGKPE 299
Query: 1057 YTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMMLAKKLGELDPLMKPKQDRYALRTSPQW 1236
YTDHLTHKLKHHPGQIEAAAIMEHILEGSSYM AK+LGELDPLMKPKQDRYALRTSPQW
Sbjct: 300 YTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMKEAKRLGELDPLMKPKQDRYALRTSPQW 359
Query: 1237 LGPQIEVIRAATKSIEREINSVNDNPLIDVSRGKAIHGGNFQGTPIGVSMDNTRLAIAAI 1416
LGPQIEVIRAATKSIEREINSVNDNPLIDVSRGKA+HGGNFQGTPIGVSMDNTRLAIAAI
Sbjct: 360 LGPQIEVIRAATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLAIAAI 419
Query: 1417 GKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNH 1596
GKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNH
Sbjct: 420 GKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNH 479
Query: 1597 VQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENVKNAVKSC 1776
VQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRH+EENVK AVK+C
Sbjct: 480 VQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHIEENVKGAVKTC 539
Query: 1777 VKTVARKTLSTDSNGHLHNARFCEKDLLLTIDREAVFAYADDPCSANYPLMQKMRAVLVE 1956
V TVA+KTLST+S G LH ARFCEKDLL IDREAVFAYADDPCSANYPLM+K+R+VLVE
Sbjct: 540 VMTVAKKTLSTNSTGGLHVARFCEKDLLSEIDREAVFAYADDPCSANYPLMKKLRSVLVE 599
Query: 1957 HALANGEAEHDVETSVFAKLATFEQEVRAVLPKEVEAARSAVENGTAAQQNRITECRSYP 2136
ALANG AE D ETSV AK+A FE+E+RA LP+ VEAAR+AVE+GTAA NRI ECRSYP
Sbjct: 600 RALANGAAEFDAETSVLAKVARFEEELRAALPRAVEAARAAVESGTAAAPNRIAECRSYP 659
Query: 2137 LYRFVRKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC 2307
LYRFVR+ELGT YLTGEKTRSPGEE++KV VA+NQGKHID LLECLKEWNG PLPIC
Sbjct: 660 LYRFVREELGTAYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGAPLPIC 716
Database: all.pep
Posted date: Nov 22, 2004 11:49 AM
Number of letters in database: 26,991,925
Number of sequences in database: 59,712
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 170985100
Number of Sequences: 59712
Number of extensions: 5288798
Number of successful extensions: 40344
Number of sequences better than 1.0e-10: 22
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40309
Number of HSP's gapped (non-prelim): 17
length of query: 858
length of database: 26,991,925
effective HSP length: 54
effective length of query: 804
effective length of database: 23,767,477
effective search space: 19109051508
effective search space used: 19109051508
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 162 (67.5 bits)
BLASTX 2.0.11 [Jan-20-2000]